m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00704)

Target Name	Small nucleolar RNA host gene (SNHG7)
Synonyms	MGC16037; NCRNA00061non-protein coding RNA 61 Click to Show/Hide
Gene Name	SNHG7
Chromosomal Location	9q34.3
Gene ID	84973
HGNC ID	HGNC:28254

Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)

SNHG7 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).

Browse Regulator

Browse Disease

Methyltransferase-like 3 (METTL3) [WRITER]

Regulator Info

In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene				[2]
Response Summary	METTL3-stabilized lncRNA Small nucleolar RNA host gene (SNHG7) accelerates glycolysis in PCa via SRSF1/c-Myc axis and inspires the understanding of m6A roles in lncRNA metabolism and tumor progression.
Target Regulation	Up regulation
Responsed Disease	Prostate cancer		ICD-11: 2C82	Disease Info
Pathway Response	Central carbon metabolism in cancer			hsa05230
Pathway Response	Glycolysis / Gluconeogenesis			hsa00010
Cell Process	Glycolysis
In-vitro Model	VCaP	Prostate carcinoma	Homo sapiens	CVCL_2235
	RWPE-1	Normal	Homo sapiens	CVCL_3791
	PC-3	Prostate carcinoma	Homo sapiens	CVCL_0035
	LNCaP	Prostate carcinoma	Homo sapiens	CVCL_0395
	DU145	Prostate carcinoma	Homo sapiens	CVCL_0105

Prostate cancer [ICD-11: 2C82]

Disease Info

In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response				[2]
Response Summary	METTL3-stabilized lncRNA Small nucleolar RNA host gene (SNHG7) accelerates glycolysis in PCa via SRSF1/c-Myc axis and inspires the understanding of m6A roles in lncRNA metabolism and tumor progression.
Responsed Disease	Prostate cancer [ICD-11: 2C82]
Target Regulator	Methyltransferase-like 3 (METTL3)		WRITER	Regulator Info
Target Regulation	Up regulation
Pathway Response	Central carbon metabolism in cancer			hsa05230
Pathway Response	Glycolysis / Gluconeogenesis			hsa00010
Cell Process	Glycolysis
In-vitro Model	VCaP	Prostate carcinoma	Homo sapiens	CVCL_2235
	RWPE-1	Normal	Homo sapiens	CVCL_3791
	PC-3	Prostate carcinoma	Homo sapiens	CVCL_0035
	LNCaP	Prostate carcinoma	Homo sapiens	CVCL_0395
	DU145	Prostate carcinoma	Homo sapiens	CVCL_0105

Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator

Histone modification

m6A Regulator: Methyltransferase-like 3 (METTL3)

Regulator Info

In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03663		Crosstalk Info
Epigenetic Regulator	Histone-lysine N-methyltransferase EZH2 (EZH2)
Regulated Target	Histone H3 lysine 27 trimethylation (H3K27me3)
Crosstalk relationship	Histone modification → m6A
Disease	Gastric cancer	Disease Info

Non-coding RNA

m6A Regulator: Methyltransferase-like 3 (METTL3)

Regulator Info

In total 2 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05623		Crosstalk Info
Epigenetic Regulator	Small nucleolar RNA host gene (SNHG7)
Regulated Target	Myc proto-oncogene protein (MYC)
Crosstalk relationship	m6A → ncRNA
Disease	Prostate cancer	Disease Info
Crosstalk ID: M6ACROT05698		Crosstalk Info
Epigenetic Regulator	Small nucleolar RNA host gene (SNHG7)
Crosstalk relationship	m6A → ncRNA
Disease	Gastric cancer	Disease Info

RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00704)

Small nucleolar RNA host gene (SNHG7)

5-methylcytidine (m5C)

In total 2 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004509		Click to Show/Hide the Full List
mod site	chr9:136728119-136728120:-
Sequence	TTCTCCTCCCGGCCAGTTCTCGAGCGCCTCACCGGGCCTCG
Cell/Tissue List	HeLa
Seq Type List	m5C-RIP-seq
Transcript ID List	ENST00000447221.1; ENST00000416970.5; ENST00000414282.5
External Link	RMBase: m5C_site_44145
mod ID: M5CSITE004510		Click to Show/Hide the Full List
mod site	chr9:136728126-136728127:-		[3]
Sequence	GCCTGACTTCTCCTCCCGGCCAGTTCTCGAGCGCCTCACCG
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000416970.5; ENST00000447221.1; ENST00000414282.5
External Link	RMBase: m5C_site_44146

N6-methyladenosine (m6A)

In total 46 m6A sequence/site(s) in this target gene
mod ID: M6ASITE090527		Click to Show/Hide the Full List
mod site	chr9:136721373-136721374:-		[4]
Sequence	TGCCCGGAATAGTAAGTGAGACATTTCTGAACTTGTTTCCT
Motif Score	2.897386905
Cell/Tissue List	HeLa; HepG2; GM12878; TREX; iSLK
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5; rmsk_2902787
External Link	RMBase: m6A_site_847757
mod ID: M6ASITE090528		Click to Show/Hide the Full List
mod site	chr9:136721524-136721525:-		[4]
Sequence	ATCCAGGCATTGGCCGGTGAACTAGAATTCACACTAGTCCC
Motif Score	3.373380952
Cell/Tissue List	HeLa; HepG2; U2OS; GM12878; A549; peripheral-blood; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5; rmsk_2902787
External Link	RMBase: m6A_site_847759
mod ID: M6ASITE090529		Click to Show/Hide the Full List
mod site	chr9:136721547-136721548:-		[4]
Sequence	CCCAGCCGACCCAGCTCTGGACCATCCAGGCATTGGCCGGT
Motif Score	3.622404762
Cell/Tissue List	HeLa; A549; HepG2; GM12878; CD4T; peripheral-blood; iSLK; MSC; TIME; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	rmsk_2902787; ENST00000414282.5
External Link	RMBase: m6A_site_847760
mod ID: M6ASITE090530		Click to Show/Hide the Full List
mod site	chr9:136721586-136721587:-		[4]
Sequence	CGCCAGGGCCAGAGGCAGGAACCTGGAGGCAGCTCTCCGCC
Motif Score	2.930744048
Cell/Tissue List	HeLa; A549; HepG2; GM12878; peripheral-blood; iSLK; MSC; TIME; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847761
mod ID: M6ASITE090531		Click to Show/Hide the Full List
mod site	chr9:136721634-136721635:-		[4]
Sequence	GGCCACTGCCTGGACATGAGACACACACCACACCCAGTGTC
Motif Score	2.897386905
Cell/Tissue List	HeLa; HepG2; GM12878; A549; peripheral-blood; iSLK; TREX; MSC; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847762
mod ID: M6ASITE090532		Click to Show/Hide the Full List
mod site	chr9:136721641-136721642:-		[4]
Sequence	CAGCAAAGGCCACTGCCTGGACATGAGACACACACCACACC
Motif Score	3.643047619
Cell/Tissue List	HeLa; HepG2; GM12878; A549; CD4T; peripheral-blood; HEK293T; iSLK; TREX; MSC; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847763
mod ID: M6ASITE090533		Click to Show/Hide the Full List
mod site	chr9:136721667-136721668:-		[5]
Sequence	ATCCTGGCTCCTGTAACAGGACGGCACAGCAAAGGCCACTG
Motif Score	3.616982143
Cell/Tissue List	CD8T
Seq Type List	m6A-CLIP/IP
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847764
mod ID: M6ASITE090534		Click to Show/Hide the Full List
mod site	chr9:136721911-136721912:-		[4]
Sequence	GTACTGGTCACACTGAGGAGACAGGTGCAGGCGTGCCGGGC
Motif Score	2.897386905
Cell/Tissue List	HeLa; peripheral-blood
Seq Type List	m6A-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847767
mod ID: M6ASITE090535		Click to Show/Hide the Full List
mod site	chr9:136722092-136722093:-		[4]
Sequence	CACAGAGGTCCTCCGTGCAGACATCCCCCTCCCACTGCACG
Motif Score	2.897386905
Cell/Tissue List	HeLa; peripheral-blood
Seq Type List	m6A-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847770
mod ID: M6ASITE090536		Click to Show/Hide the Full List
mod site	chr9:136722119-136722120:-		[4]
Sequence	AGAGCCCGCTGTACACCTGGACAGGGCCACAGAGGTCCTCC
Motif Score	3.643047619
Cell/Tissue List	HeLa; peripheral-blood; iSLK
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847771
mod ID: M6ASITE090537		Click to Show/Hide the Full List
mod site	chr9:136722235-136722236:-		[4]
Sequence	GCCCCGGGTGGGCTTGTCAAACAGTACCAGCTCCCGCCGGG
Motif Score	2.20572619
Cell/Tissue List	HeLa; peripheral-blood; HEK293T
Seq Type List	m6A-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847775
mod ID: M6ASITE090538		Click to Show/Hide the Full List
mod site	chr9:136722334-136722335:-		[4]
Sequence	GGCATATGACCGTGGTGTGGACTCCTGCCCTGCCCCCTAGG
Motif Score	4.065041667
Cell/Tissue List	HeLa; peripheral-blood; HEK293T; iSLK; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847777
mod ID: M6ASITE090539		Click to Show/Hide the Full List
mod site	chr9:136722559-136722560:-		[4]
Sequence	CGGGGCACCTGCCCTGCTGGACACACGGCCCTTGACTGCAG
Motif Score	3.643047619
Cell/Tissue List	HeLa; peripheral-blood; HEK293T; iSLK; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847778
mod ID: M6ASITE090540		Click to Show/Hide the Full List
mod site	chr9:136722751-136722752:-		[6]
Sequence	GCCTGTGTGGCTGCTGCCAGACAGACCTCCCGCCTCCTGGC
Motif Score	2.897386905
Cell/Tissue List	peripheral-blood; HEK293T
Seq Type List	m6A-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847779
mod ID: M6ASITE090541		Click to Show/Hide the Full List
mod site	chr9:136722857-136722858:-		[4]
Sequence	CGGGGTGGTCTGCCGGCCAGACCAGCACATCTGCCAGGTTA
Motif Score	2.876744048
Cell/Tissue List	HeLa; peripheral-blood
Seq Type List	m6A-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847780
mod ID: M6ASITE090542		Click to Show/Hide the Full List
mod site	chr9:136722948-136722949:-		[4]
Sequence	AGGTTCGCCTGGCGTTTGGGACCAAAAGAAAGGAAAAGCCA
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; HEK293T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; endometrial; NB4; MM6
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847781
mod ID: M6ASITE090543		Click to Show/Hide the Full List
mod site	chr9:136723007-136723008:-		[4]
Sequence	TGAAGTCAGCCATGAGCAGGACCTGGCCAACCAGCGCCGGC
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; HEK293T; U2OS; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; MSC; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847784
mod ID: M6ASITE090544		Click to Show/Hide the Full List
mod site	chr9:136723045-136723046:-		[4]
Sequence	GGACTTGGCTTCCGCCAGGGACACCCGGTTGTCCTTGTTGA
Motif Score	3.643047619
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; TIME; iSLK; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847787
mod ID: M6ASITE090545		Click to Show/Hide the Full List
mod site	chr9:136723063-136723064:-		[4]
Sequence	CTGCAGCAGGGCCCACACGGACTTGGCTTCCGCCAGGGACA
Motif Score	4.065041667
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; TIME; iSLK; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847788
mod ID: M6ASITE090546		Click to Show/Hide the Full List
mod site	chr9:136723093-136723094:-		[4]
Sequence	CAGGGACAGCAGCAGCAGGAACTCGTTACGCTGCAGCAGGG
Motif Score	3.373380952
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; TIME; iSLK; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847789
mod ID: M6ASITE090547		Click to Show/Hide the Full List
mod site	chr9:136723108-136723109:-		[4]
Sequence	GTGCTCCTTCTCCTGCAGGGACAGCAGCAGCAGGAACTCGT
Motif Score	3.643047619
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; TIME; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847790
mod ID: M6ASITE090548		Click to Show/Hide the Full List
mod site	chr9:136723978-136723979:-		[7]
Sequence	GTAACAAACCCCCTTGGAGGACTCTCCTGCCGGGATGTCCA
Motif Score	4.065041667
Cell/Tissue List	HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; TIME; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847808
mod ID: M6ASITE090549		Click to Show/Hide the Full List
mod site	chr9:136723991-136723992:-		[7]
Sequence	TACGTTCTTCAGAGTAACAAACCCCCTTGGAGGACTCTCCT
Motif Score	2.185083333
Cell/Tissue List	HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; TIME; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000414282.5
External Link	RMBase: m6A_site_847809
mod ID: M6ASITE090550		Click to Show/Hide the Full List
mod site	chr9:136724657-136724658:-		[8]
Sequence	GAATTAAAAGATTTAAATGCACATTTCTTTAAGGATAATAT
Motif Score	2.830589286
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000414282.5; ENST00000416970.5
External Link	RMBase: m6A_site_847829
mod ID: M6ASITE090551		Click to Show/Hide the Full List
mod site	chr9:136724689-136724690:-		[8]
Sequence	GAAAACATTTATTTTAAAATACAGGATGAAGTGAATTAAAA
Motif Score	2.110482143
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000414282.5; ENST00000416970.5; ENST00000436596.1
External Link	RMBase: m6A_site_847830
mod ID: M6ASITE090552		Click to Show/Hide the Full List
mod site	chr9:136724705-136724706:-		[8]
Sequence	GGGGAAAATCTATATGGAAAACATTTATTTTAAAATACAGG
Motif Score	2.20572619
Cell/Tissue List	HEK293T; A549; H1B; hNPCs; hESCs; fibroblasts; MM6; Huh7; HEK293A-TOA; TIME
Seq Type List	MeRIP-seq; DART-seq; m6A-seq
Transcript ID List	ENST00000416970.5; ENST00000414282.5; ENST00000436596.1
External Link	RMBase: m6A_site_847831
mod ID: M6ASITE090553		Click to Show/Hide the Full List
mod site	chr9:136724749-136724750:-		[7]
Sequence	TGAACTGCCTGGAACCTAAGACCCTGAATTCTTTTCCCCCC
Motif Score	2.876744048
Cell/Tissue List	HEK293T; A549; hNPCs; MM6; Huh7; HEK293A-TOA; TIME
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000416970.5; ENST00000436596.1; ENST00000414282.5
External Link	RMBase: m6A_site_847832
mod ID: M6ASITE090554		Click to Show/Hide the Full List
mod site	chr9:136724756-136724757:-		[9]
Sequence	CTGTTTTTGAACTGCCTGGAACCTAAGACCCTGAATTCTTT
Motif Score	2.930744048
Cell/Tissue List	HEK293T; A549; MM6; Huh7; HEK293A-TOA
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000436596.1; ENST00000414282.5; ENST00000416970.5
External Link	RMBase: m6A_site_847833
mod ID: M6ASITE090555		Click to Show/Hide the Full List
mod site	chr9:136724766-136724767:-		[9]
Sequence	AACCGCGTGGCTGTTTTTGAACTGCCTGGAACCTAAGACCC
Motif Score	3.373380952
Cell/Tissue List	HEK293T; A549; MM6; Huh7; HEK293A-TOA; AML
Seq Type List	MeRIP-seq; m6A-seq; miCLIP
Transcript ID List	ENST00000416970.5; ENST00000436596.1; ENST00000414282.5
External Link	RMBase: m6A_site_847834
mod ID: M6ASITE090556		Click to Show/Hide the Full List
mod site	chr9:136724785-136724786:-		[9]
Sequence	ATTCTGGTGGAGAAAAAAGAACCGCGTGGCTGTTTTTGAAC
Motif Score	2.930744048
Cell/Tissue List	HEK293T; A549; MM6; Huh7
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000436596.1; ENST00000414282.5; ENST00000416970.5
External Link	RMBase: m6A_site_847835
mod ID: M6ASITE090557		Click to Show/Hide the Full List
mod site	chr9:136724854-136724855:-		[10]
Sequence	GGCCAGGGGCCACTGCCAGGACCACGCCTCCCTTTTCATAT
Motif Score	3.622404762
Cell/Tissue List	HepG2; MM6; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000436596.1; ENST00000416970.5; ENST00000414282.5
External Link	RMBase: m6A_site_847836
mod ID: M6ASITE090558		Click to Show/Hide the Full List
mod site	chr9:136725051-136725052:-		[8]
Sequence	AGGCTGGCTGGAATAAAGGTACAGATAGAGGCCTCACCCCC
Motif Score	2.856142857
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000416970.5; ENST00000414282.5; ENST00000436596.1
External Link	RMBase: m6A_site_847837
mod ID: M6ASITE090559		Click to Show/Hide the Full List
mod site	chr9:136725242-136725243:-		[4]
Sequence	AGCCTGGACAACAGAGTGGGACTCTGTCTCAAAAAAAAAAA
Motif Score	4.065041667
Cell/Tissue List	HeLa; HepG2; endometrial; HEC-1-A
Seq Type List	m6A-seq
Transcript ID List	ENST00000447221.1; ENST00000414282.5; ENST00000436596.1; ENST00000416970.5; rmsk_2902788
External Link	RMBase: m6A_site_847838
mod ID: M6ASITE090560		Click to Show/Hide the Full List
mod site	chr9:136725255-136725256:-		[4]
Sequence	ACCACTGCACTCCAGCCTGGACAACAGAGTGGGACTCTGTC
Motif Score	3.643047619
Cell/Tissue List	HeLa; HepG2; endometrial; HEC-1-A
Seq Type List	m6A-seq
Transcript ID List	ENST00000436596.1; ENST00000414282.5; ENST00000447221.1; rmsk_2902788; ENST00000416970.5
External Link	RMBase: m6A_site_847839
mod ID: M6ASITE090561		Click to Show/Hide the Full List
mod site	chr9:136725311-136725312:-		[4]
Sequence	GAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCA
Motif Score	2.930744048
Cell/Tissue List	HeLa; HepG2; HEC-1-A
Seq Type List	m6A-seq
Transcript ID List	ENST00000436596.1; ENST00000416970.5; ENST00000447221.1; ENST00000414282.5; rmsk_2902788
External Link	RMBase: m6A_site_847840
mod ID: M6ASITE090562		Click to Show/Hide the Full List
mod site	chr9:136725815-136725816:-		[8]
Sequence	CAGGCTGTTCCTTGTCCAGCACTAGTCATCCCAGGGGGGCG
Motif Score	3.252583333
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000414282.5; ENST00000447221.1; ENST00000416970.5; ENST00000436596.1
External Link	RMBase: m6A_site_847841
mod ID: M6ASITE090563		Click to Show/Hide the Full List
mod site	chr9:136726140-136726141:-		[4]
Sequence	TCTACACTCAGTGCTCGGGAACCAGTGGGCACTGAGAATGG
Motif Score	2.930744048
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000414282.5; ENST00000362567.2; ENST00000436596.1; ENST00000447221.1; ENST00000626886.1; ENST00000416970.5
External Link	RMBase: m6A_site_847842
mod ID: M6ASITE090564		Click to Show/Hide the Full List
mod site	chr9:136726211-136726212:-		[4]
Sequence	TGGACCTGTTGGCACCACAGACAGTTGCTCTGCTGTGCCTG
Motif Score	2.897386905
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000416970.5; ENST00000436596.1; ENST00000447221.1; ENST00000626886.1; ENST00000414282.5; ENST00000362567.2
External Link	RMBase: m6A_site_847843
mod ID: M6ASITE090565		Click to Show/Hide the Full List
mod site	chr9:136726228-136726229:-		[4]
Sequence	CCCTGCGGATGCTGTCCTGGACCTGTTGGCACCACAGACAG
Motif Score	3.622404762
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000416970.5; ENST00000436596.1; ENST00000362567.2; ENST00000626886.1; ENST00000447221.1; ENST00000414282.5
External Link	RMBase: m6A_site_847844
mod ID: M6ASITE090566		Click to Show/Hide the Full List
mod site	chr9:136726368-136726369:-		[8]
Sequence	GGTGACTTCGCCTGTGATGGACTTCCAGTGTGAGCACTGGC
Motif Score	4.065041667
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000436596.1; ENST00000416970.5; ENST00000447221.1; ENST00000414282.5
External Link	RMBase: m6A_site_847845
mod ID: M6ASITE090567		Click to Show/Hide the Full List
mod site	chr9:136726384-136726385:-		[8]
Sequence	TTTAACACGGGAAGGAGGTGACTTCGCCTGTGATGGACTTC
Motif Score	3.28175
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000416970.5; ENST00000414282.5; ENST00000447221.1; ENST00000436596.1
External Link	RMBase: m6A_site_847846
mod ID: M6ASITE090568		Click to Show/Hide the Full List
mod site	chr9:136726400-136726401:-		[11]
Sequence	CCAAGCATTCTTGTTATTTAACACGGGAAGGAGGTGACTTC
Motif Score	2.168095238
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000436596.1; ENST00000447221.1; ENST00000414282.5; ENST00000416970.5
External Link	RMBase: m6A_site_847847
mod ID: M6ASITE090569		Click to Show/Hide the Full List
mod site	chr9:136726751-136726752:-		[11]
Sequence	TTTGAATGTTTGATAGTCTCACACTCCTGTTTTGTGGACAG
Motif Score	2.047297619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000391185.2; ENST00000414282.5; ENST00000447221.1; ENST00000630429.1; ENST00000416970.5
External Link	RMBase: m6A_site_847848
mod ID: M6ASITE090570		Click to Show/Hide the Full List
mod site	chr9:136726840-136726841:-		[11]
Sequence	GCAGCTGTGGCTGCCGTGTCACATCTGTGTCATTAGGTGGC
Motif Score	2.047297619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000447221.1; ENST00000630429.1; ENST00000414282.5; ENST00000391185.2; ENST00000416970.5
External Link	RMBase: m6A_site_847849
mod ID: M6ASITE090571		Click to Show/Hide the Full List
mod site	chr9:136727020-136727021:-		[4]
Sequence	GTTGGTGCATTGGAGCTGGAACAGGGTCAATCCTCCAATGT
Motif Score	2.951386905
Cell/Tissue List	HeLa; HepG2; HEK293T; MM6
Seq Type List	m6A-seq
Transcript ID List	ENST00000414282.5; ENST00000416970.5; ENST00000447221.1
External Link	RMBase: m6A_site_847850
mod ID: M6ASITE090572		Click to Show/Hide the Full List
mod site	chr9:136728057-136728058:-		[4]
Sequence	GGCGCTGCGCGGCCTAGGGGACTGGGCTGCTGGCCTCCGGG
Motif Score	4.065041667
Cell/Tissue List	HeLa; HepG2; U2OS; H1A; HEK293T; NB4; MM6
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000414282.5; ENST00000416970.5; ENST00000447221.1
External Link	RMBase: m6A_site_847851

Pseudouridine (Pseudo)

In total 1 m6A sequence/site(s) in this target gene
mod ID: PSESITE000272		Click to Show/Hide the Full List
mod site	chr9:136724884-136724885:-		[12]
Sequence	CCTGCCTGGGTGTTGCTGTGTATTCCTGCCGGCCAGGGGCC
Transcript ID List	ENST00000436596.1; ENST00000414282.5; ENST00000416970.5
External Link	RMBase: Pseudo_site_4826

Ref 1	Emerging drugs in neuropathic pain. Expert Opin Emerg Drugs. 2007 Mar;12(1):113-26. doi: 10.1517/14728214.12.1.113.
Ref 2	METTL3-stabilized lncRNA SNHG7 accelerates glycolysis in prostate cancer via SRSF1/c-Myc axis. Exp Cell Res. 2022 Jul 1;416(1):113149. doi: 10.1016/j.yexcr.2022.113149. Epub 2022 Apr 9.
Ref 3	5-methylcytosine promotes mRNA export - NSUN2 as the methyltransferase and ALYREF as an m(5)C reader. Cell Res. 2017 May;27(5):606-625. doi: 10.1038/cr.2017.55. Epub 2017 Apr 18.
Ref 4	VIRMA mediates preferential m(6)A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Cell Discov. 2018 Feb 27;4:10. doi: 10.1038/s41421-018-0019-0. eCollection 2018.
Ref 5	A majority of m6A residues are in the last exons, allowing the potential for 3' UTR regulation. Genes Dev. 2015 Oct 1;29(19):2037-53. doi: 10.1101/gad.269415.115. Epub 2015 Sep 24.
Ref 6	R-2HG Exhibits Anti-tumor Activity by Targeting FTO/m(6)A/MYC/CEBPA Signaling. Cell. 2018 Jan 11;172(1-2):90-105.e23. doi: 10.1016/j.cell.2017.11.031. Epub 2017 Dec 14.
Ref 7	Viral N(6)-methyladenosine upregulates replication and pathogenesis of human respiratory syncytial virus. Nat Commun. 2019 Oct 9;10(1):4595. doi: 10.1038/s41467-019-12504-y.
Ref 8	DART-seq: an antibody-free method for global m(6)A detection. Nat Methods. 2019 Dec;16(12):1275-1280. doi: 10.1038/s41592-019-0570-0. Epub 2019 Sep 23.
Ref 9	Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites. Cell Rep. 2014 Jul 10;8(1):284-96. doi: 10.1016/j.celrep.2014.05.048. Epub 2014 Jun 26.
Ref 10	Efficacy of MEK inhibition in patients with histiocytic neoplasms. Nature. 2019 Mar;567(7749):521-524. doi: 10.1038/s41586-019-1012-y. Epub 2019 Mar 13.
Ref 11	Deciphering the "m(6)A Code" via Antibody-Independent Quantitative Profiling. Cell. 2019 Jul 25;178(3):731-747.e16. doi: 10.1016/j.cell.2019.06.013. Epub 2019 Jun 27.
Ref 12	Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA. Cell. 2014 Sep 25;159(1):148-162. doi: 10.1016/j.cell.2014.08.028. Epub 2014 Sep 11.

m6A Target Gene Information

Cite M6AREG

Correspondence

Prof. Feng ZHU

Prof. Shuiping Liu

Visitor Map