General Information of the m6A Target Gene (ID: M6ATAR00667)
Target Name Neurocalcin-delta (NCALD)
Gene Name NCALD
Chromosomal Location 8q22.3
Family Recoverin family
Function
May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions.
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Gene ID 83988
Uniprot ID
NCALD_HUMAN
HGNC ID
HGNC:7655
KEGG ID
hsa:83988
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
NCALD can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
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Methyltransferase-like 3 (METTL3) [WRITER]
Representative RNA-seq result indicating the expression of this target gene regulated by METTL3
Cell Line LNCaP cell line Homo sapiens
Treatment: shMETTL3 LNCaP cells
Control: shControl LNCaP cells
GSE147884
Regulation
logFC: 1.15E+00
p-value: 3.16E-04
More Results Click to View More RNA-seq Results
Representative RIP-seq result supporting the interaction between NCALD and the regulator
Cell Line MDA-MB-231 Homo sapiens
Regulation logFC: 8.03E+00 GSE60213
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary METTL3 dependent m6A methylation was upregulated in CRC to promote the processing of miR 181d 5p by DGCR8. This led to increased miR 181d 5p expression, which inhibited the 5 FU sensitivity of CRC cells by targeting Neurocalcin-delta (NCALD).
Target Regulation Down regulation
Responsed Disease Colorectal cancer ICD-11: 2B91
Responsed Drug Fluorouracil Approved
In-vitro Model HT29 Colon cancer Mus musculus CVCL_A8EZ
HCT 116 Colon carcinoma Homo sapiens CVCL_0291
In-vivo Model A tumor-bearing model was established by subcutaneously injecting 100 ul HT29 cells (5×106) followed by an intravenous injection of CAFs-derived exosomes (50 ug/mouse every three days) into the tail vein of the mice. An intraperitoneal injection of 5-FU (50 mg/kg, every week) was administered on day 12.
Colorectal cancer [ICD-11: 2B91]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary METTL3 dependent m6A methylation was upregulated in CRC to promote the processing of miR 181d 5p by DGCR8. This led to increased miR 181d 5p expression, which inhibited the 5 FU sensitivity of CRC cells by targeting Neurocalcin-delta (NCALD).
Responsed Disease Colorectal cancer [ICD-11: 2B91]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Down regulation
Responsed Drug Fluorouracil Approved
In-vitro Model HT29 Colon cancer Mus musculus CVCL_A8EZ
HCT 116 Colon carcinoma Homo sapiens CVCL_0291
In-vivo Model A tumor-bearing model was established by subcutaneously injecting 100 ul HT29 cells (5×106) followed by an intravenous injection of CAFs-derived exosomes (50 ug/mouse every three days) into the tail vein of the mice. An intraperitoneal injection of 5-FU (50 mg/kg, every week) was administered on day 12.
Fluorouracil [Approved]
In total 1 item(s) under this drug
Experiment 1 Reporting the m6A-centered Drug Response [1]
Response Summary METTL3 dependent m6A methylation was upregulated in CRC to promote the processing of miR 181d 5p by DGCR8. This led to increased miR 181d 5p expression, which inhibited the 5 FU sensitivity of CRC cells by targeting Neurocalcin-delta (NCALD).
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Down regulation
Responsed Disease Colorectal cancer ICD-11: 2B91
In-vitro Model HT29 Colon cancer Mus musculus CVCL_A8EZ
HCT 116 Colon carcinoma Homo sapiens CVCL_0291
In-vivo Model A tumor-bearing model was established by subcutaneously injecting 100 ul HT29 cells (5×106) followed by an intravenous injection of CAFs-derived exosomes (50 ug/mouse every three days) into the tail vein of the mice. An intraperitoneal injection of 5-FU (50 mg/kg, every week) was administered on day 12.
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: Methyltransferase-like 3 (METTL3)
In total 2 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03575
Epigenetic Regulator Histone acetyltransferase p300 (P300)
Regulated Target Histone H3 lysine 27 acetylation (H3K27ac)
Crosstalk relationship Histone modification → m6A
Disease Colorectal cancer
Drug Fluorouracil
Crosstalk ID: M6ACROT03620
Epigenetic Regulator N-lysine methyltransferase SMYD2 (SMYD2)
Regulated Target Histone H3 lysine 4 trimethylation (H3K4me3)
Crosstalk relationship Histone modification → m6A
Disease Colorectal cancer
Drug Fluorouracil
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00667)
Neurocalcin-delta (NCALD)
Adenosine-to-Inosine editing (A-to-I)
In total 14 m6A sequence/site(s) in this target gene
mod ID: A2ISITE002715 Click to Show/Hide the Full List
mod site chr8:101731391-101731392:- [2]
Sequence TTATTGGAGAATTTACTGCAAAGAGGTTCTTCATGTCATTG
Transcript ID List ENST00000520346.1; ENST00000517531.5; ENST00000520425.5; ENST00000524137.5; ENST00000518661.5; ENST00000518166.5; ENST00000523645.5; ENST00000517822.5; ENST00000520690.5; ENST00000522078.5; ENST00000311028.4; ENST00000519098.5; ENST00000522951.5; ENST00000523923.5; ENST00000524209.5; ENST00000521599.5; ENST00000395923.5; ENST00000522448.5; ENST00000220931.11; ENST00000518727.5; ENST00000522252.5; ENST00000522206.5; ENST00000521964.5
External Link RMBase: RNA-editing_site_132342
mod ID: A2ISITE002716 Click to Show/Hide the Full List
mod site chr8:101731392-101731393:- [2]
Sequence CTTATTGGAGAATTTACTGCAAAGAGGTTCTTCATGTCATT
Transcript ID List ENST00000524209.5; ENST00000524137.5; ENST00000522078.5; ENST00000517531.5; ENST00000518661.5; ENST00000520425.5; ENST00000520690.5; ENST00000519098.5; ENST00000220931.11; ENST00000522951.5; ENST00000521964.5; ENST00000520346.1; ENST00000522252.5; ENST00000522448.5; ENST00000523923.5; ENST00000522206.5; ENST00000517822.5; ENST00000311028.4; ENST00000523645.5; ENST00000518166.5; ENST00000518727.5; ENST00000395923.5; ENST00000521599.5
External Link RMBase: RNA-editing_site_132343
mod ID: A2ISITE002717 Click to Show/Hide the Full List
mod site chr8:101843335-101843336:- [2]
Sequence AGTTCTGATTCAGTAGGTCTAGCGTGAGGCCTGAGAATTTG
Transcript ID List ENST00000311028.4; ENST00000521964.5; ENST00000517531.5; ENST00000521599.5; ENST00000518166.5; ENST00000524209.5; ENST00000518661.5; ENST00000523923.5; ENST00000522206.5; ENST00000517822.5; ENST00000520425.5; ENST00000395923.5; ENST00000518952.5; ENST00000520690.5; ENST00000522078.5; ENST00000518727.5
External Link RMBase: RNA-editing_site_132344
mod ID: A2ISITE002718 Click to Show/Hide the Full List
mod site chr8:101872343-101872344:- [3]
Sequence GTTTAATGAGGAGGATGAACATGCTATTGAAATGTACAGAT
Transcript ID List ENST00000522206.5; ENST00000395923.5; ENST00000520425.5; ENST00000518727.5; ENST00000524209.5; ENST00000523923.5; ENST00000521599.5; ENST00000518952.5; ENST00000517531.5; ENST00000635554.1; ENST00000522078.5; ENST00000518661.5; ENST00000517822.5; ENST00000520690.5; ENST00000521964.5; ENST00000518166.5; ENST00000311028.4
External Link RMBase: RNA-editing_site_132345
mod ID: A2ISITE002719 Click to Show/Hide the Full List
mod site chr8:102020431-102020432:- [2]
Sequence AAAGAAATAGTGGCATATTAAAGTGTGATACAATGCTAAGA
Transcript ID List ENST00000518952.5; ENST00000311028.4; ENST00000521964.5; ENST00000522078.5; ENST00000518166.5; ENST00000521599.5; ENST00000517822.5; ENST00000517639.5; ENST00000395923.5; ENST00000524209.5; ENST00000523923.5; ENST00000522206.5; ENST00000517531.5
External Link RMBase: RNA-editing_site_132346
mod ID: A2ISITE002720 Click to Show/Hide the Full List
mod site chr8:102020432-102020433:- [2]
Sequence TAAAGAAATAGTGGCATATTAAAGTGTGATACAATGCTAAG
Transcript ID List ENST00000395923.5; ENST00000523923.5; ENST00000522078.5; ENST00000517531.5; ENST00000517639.5; ENST00000518952.5; ENST00000521599.5; ENST00000524209.5; ENST00000517822.5; ENST00000311028.4; ENST00000521964.5; ENST00000522206.5; ENST00000518166.5
External Link RMBase: RNA-editing_site_132347
mod ID: A2ISITE002721 Click to Show/Hide the Full List
mod site chr8:102020454-102020455:- [2]
Sequence AGAACCAATGTAGAACCAATAATAAAGAAATAGTGGCATAT
Transcript ID List ENST00000522206.5; ENST00000523923.5; ENST00000524209.5; ENST00000517639.5; ENST00000521964.5; ENST00000521599.5; ENST00000395923.5; ENST00000517531.5; ENST00000518166.5; ENST00000518952.5; ENST00000522078.5; ENST00000517822.5; ENST00000311028.4
External Link RMBase: RNA-editing_site_132348
mod ID: A2ISITE002722 Click to Show/Hide the Full List
mod site chr8:102094087-102094088:- [2]
Sequence GATAATTTTGGATATACAATAGGAAATGCCTTTCATCATGA
Transcript ID List ENST00000518952.5; ENST00000517822.5; ENST00000311028.4; ENST00000521599.5; ENST00000521964.5; ENST00000523923.5; ENST00000517531.5; ENST00000522078.5; ENST00000517639.5; ENST00000524209.5; ENST00000522206.5; ENST00000395923.5; ENST00000518166.5
External Link RMBase: RNA-editing_site_132349
mod ID: A2ISITE002723 Click to Show/Hide the Full List
mod site chr8:102094089-102094090:- [2]
Sequence TTGATAATTTTGGATATACAATAGGAAATGCCTTTCATCAT
Transcript ID List ENST00000521599.5; ENST00000517639.5; ENST00000518166.5; ENST00000517822.5; ENST00000522078.5; ENST00000518952.5; ENST00000521964.5; ENST00000517531.5; ENST00000311028.4; ENST00000523923.5; ENST00000522206.5; ENST00000395923.5; ENST00000524209.5
External Link RMBase: RNA-editing_site_132350
mod ID: A2ISITE002724 Click to Show/Hide the Full List
mod site chr8:102094118-102094119:- [2]
Sequence ATTTGAAGAGTGATCCTTTTAGAGTGTGATTGATAATTTTG
Transcript ID List ENST00000522078.5; ENST00000517822.5; ENST00000311028.4; ENST00000517531.5; ENST00000517639.5; ENST00000518166.5; ENST00000523923.5; ENST00000522206.5; ENST00000524209.5; ENST00000521599.5; ENST00000518952.5; ENST00000395923.5; ENST00000521964.5
External Link RMBase: RNA-editing_site_132351
mod ID: A2ISITE002725 Click to Show/Hide the Full List
mod site chr8:102110008-102110009:- [2]
Sequence CAATAAAACATTGTCTACAAAGATTGCAGAATAAAAGATAA
Transcript ID List ENST00000521964.5; ENST00000522078.5; ENST00000522206.5; ENST00000518952.5; ENST00000523923.5; ENST00000311028.4; ENST00000524209.5; ENST00000517531.5; ENST00000518166.5; ENST00000517822.5; ENST00000395923.5; ENST00000521599.5; ENST00000517639.5
External Link RMBase: RNA-editing_site_132352
mod ID: A2ISITE002726 Click to Show/Hide the Full List
mod site chr8:102110023-102110024:- [2]
Sequence GAAATATTATATATGCAATAAAACATTGTCTACAAAGATTG
Transcript ID List ENST00000522206.5; ENST00000521964.5; ENST00000522078.5; ENST00000517531.5; ENST00000518952.5; ENST00000311028.4; ENST00000521599.5; ENST00000524209.5; ENST00000523923.5; ENST00000518166.5; ENST00000517822.5; ENST00000517639.5; ENST00000395923.5
External Link RMBase: RNA-editing_site_132353
mod ID: A2ISITE002727 Click to Show/Hide the Full List
mod site chr8:102110024-102110025:- [2]
Sequence TGAAATATTATATATGCAATAAAACATTGTCTACAAAGATT
Transcript ID List ENST00000524209.5; ENST00000395923.5; ENST00000522078.5; ENST00000522206.5; ENST00000523923.5; ENST00000517639.5; ENST00000517822.5; ENST00000518952.5; ENST00000521599.5; ENST00000517531.5; ENST00000521964.5; ENST00000311028.4; ENST00000518166.5
External Link RMBase: RNA-editing_site_132354
mod ID: A2ISITE002728 Click to Show/Hide the Full List
mod site chr8:102110031-102110032:- [2]
Sequence ATTCAGATGAAATATTATATATGCAATAAAACATTGTCTAC
Transcript ID List ENST00000524209.5; ENST00000521599.5; ENST00000311028.4; ENST00000395923.5; ENST00000522078.5; ENST00000521964.5; ENST00000523923.5; ENST00000522206.5; ENST00000517531.5; ENST00000517822.5; ENST00000518952.5; ENST00000517639.5; ENST00000518166.5
External Link RMBase: RNA-editing_site_132355
5-methylcytidine (m5C)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004329 Click to Show/Hide the Full List
mod site chr8:101687397-101687398:-
Sequence TACCAAAACTTGCCAAATTCCTCCATGGCCAAGTGTTAAAA
Cell/Tissue List frontalcortex
Seq Type List Bisulfite-seq
Transcript ID List ENST00000220931.11; ENST00000395923.5; ENST00000311028.4
External Link RMBase: m5C_site_41645
N6-methyladenosine (m6A)
In total 46 m6A sequence/site(s) in this target gene
mod ID: M6ASITE086336 Click to Show/Hide the Full List
mod site chr8:101686765-101686766:- [4]
Sequence CAGCCTGTGATGTTCAAGGGACTGGAATAAAGTGGCTTACG
Motif Score 4.065041667
Cell/Tissue List HeLa; A549; GM12878; LCLs; Huh7; HEK293A-TOA; MSC; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000220931.11; ENST00000395923.5; ENST00000311028.4
External Link RMBase: m6A_site_805397
mod ID: M6ASITE086337 Click to Show/Hide the Full List
mod site chr8:101686787-101686788:- [4]
Sequence CCTGTTCTGTCCCAAATAAAACCAGCCTGTGATGTTCAAGG
Motif Score 2.185083333
Cell/Tissue List HeLa; A549; GM12878; Huh7; HEK293A-TOA; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395923.5; ENST00000311028.4; ENST00000220931.11
External Link RMBase: m6A_site_805399
mod ID: M6ASITE086338 Click to Show/Hide the Full List
mod site chr8:101686808-101686809:- [4]
Sequence CAGGGACCTTTGGAAATAAAACCTGTTCTGTCCCAAATAAA
Motif Score 2.185083333
Cell/Tissue List HeLa; A549; GM12878; Huh7; HEK293A-TOA; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395923.5; ENST00000220931.11; ENST00000311028.4
External Link RMBase: m6A_site_805400
mod ID: M6ASITE086339 Click to Show/Hide the Full List
mod site chr8:101686823-101686824:- [4]
Sequence TGTCATTGCTGTGTTCAGGGACCTTTGGAAATAAAACCTGT
Motif Score 3.622404762
Cell/Tissue List HeLa; A549; GM12878; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000220931.11; ENST00000395923.5; ENST00000311028.4
External Link RMBase: m6A_site_805401
mod ID: M6ASITE086340 Click to Show/Hide the Full List
mod site chr8:101687594-101687595:- [5]
Sequence CAGGAGAAAAATGTGACTAGACATGCTAACCTCCAGGTTTT
Motif Score 2.897386905
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000220931.11; ENST00000311028.4; ENST00000395923.5
External Link RMBase: m6A_site_805402
mod ID: M6ASITE086341 Click to Show/Hide the Full List
mod site chr8:101687624-101687625:- [5]
Sequence GAGGAACCACAGAAAGAGAGACATCATGACCAGGAGAAAAA
Motif Score 2.897386905
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000311028.4; ENST00000395923.5; ENST00000220931.11
External Link RMBase: m6A_site_805403
mod ID: M6ASITE086342 Click to Show/Hide the Full List
mod site chr8:101687639-101687640:- [5]
Sequence CCACTTGCCAAAGAAGAGGAACCACAGAAAGAGAGACATCA
Motif Score 2.930744048
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000395923.5; ENST00000311028.4; ENST00000220931.11
External Link RMBase: m6A_site_805404
mod ID: M6ASITE086343 Click to Show/Hide the Full List
mod site chr8:101687713-101687714:- [5]
Sequence CTCAAGGTTGTTGATGGGGAACTTGCCACTAAGAGAAGGCA
Motif Score 3.373380952
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000395923.5; ENST00000311028.4; ENST00000220931.11
External Link RMBase: m6A_site_805405
mod ID: M6ASITE086344 Click to Show/Hide the Full List
mod site chr8:101687782-101687783:- [6]
Sequence AGAGTAAAAATTTGCTGGTTACAGGCGAGTCATACTCTTGC
Motif Score 2.07285119
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000311028.4; ENST00000395923.5; ENST00000220931.11
External Link RMBase: m6A_site_805406
mod ID: M6ASITE086345 Click to Show/Hide the Full List
mod site chr8:101687827-101687828:- [5]
Sequence GTTTGGTCTGGTGACCTCAGACACACTAATTTGAATTGAAA
Motif Score 2.897386905
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000220931.11; ENST00000311028.4; ENST00000395923.5
External Link RMBase: m6A_site_805407
mod ID: M6ASITE086346 Click to Show/Hide the Full List
mod site chr8:101688547-101688548:- [7]
Sequence TAACATATTGGGTAATGCAGACCAAATTAAGTGTTTTGCCT
Motif Score 2.876744048
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000311028.4; ENST00000522754.1; ENST00000521599.5; ENST00000395923.5; ENST00000220931.11; ENST00000519508.6; ENST00000522951.5
External Link RMBase: m6A_site_805408
mod ID: M6ASITE086347 Click to Show/Hide the Full List
mod site chr8:101688613-101688614:- [8]
Sequence GTAACATATTCCAAAACCAGACCCATCTTGTTGCCTATTGT
Motif Score 2.876744048
Cell/Tissue List hNPCs; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000522951.5; ENST00000519508.6; ENST00000311028.4; ENST00000395923.5; ENST00000521599.5; ENST00000220931.11; ENST00000522754.1
External Link RMBase: m6A_site_805409
mod ID: M6ASITE086348 Click to Show/Hide the Full List
mod site chr8:101688618-101688619:- [8]
Sequence AAATGGTAACATATTCCAAAACCAGACCCATCTTGTTGCCT
Motif Score 2.185083333
Cell/Tissue List hNPCs; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000522951.5; ENST00000220931.11; ENST00000521599.5; ENST00000522754.1; ENST00000395923.5; ENST00000519508.6; ENST00000311028.4
External Link RMBase: m6A_site_805410
mod ID: M6ASITE086349 Click to Show/Hide the Full List
mod site chr8:101688642-101688643:- [8]
Sequence TGCGTGTCTTTGGAAATTAAACACAAATGGTAACATATTCC
Motif Score 2.20572619
Cell/Tissue List hNPCs; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000220931.11; ENST00000522448.5; ENST00000522951.5; ENST00000395923.5; ENST00000521599.5; ENST00000522754.1; ENST00000519508.6; ENST00000311028.4
External Link RMBase: m6A_site_805411
mod ID: M6ASITE086350 Click to Show/Hide the Full List
mod site chr8:101688743-101688744:- [6]
Sequence CTGTAGTTTCTAAGCTGTGAACATTTCAAGATAAATTAACA
Motif Score 2.951386905
Cell/Tissue List brain; hNPCs; A549; GM12878; Huh7
Seq Type List m6A-REF-seq; m6A-seq; MeRIP-seq
Transcript ID List ENST00000395923.5; ENST00000522754.1; ENST00000521599.5; ENST00000519508.6; ENST00000220931.11; ENST00000522448.5; ENST00000311028.4; ENST00000522951.5
External Link RMBase: m6A_site_805412
mod ID: M6ASITE086351 Click to Show/Hide the Full List
mod site chr8:101688806-101688807:- [8]
Sequence GGCTATTCCAGCGAGCTGGGACATTTCCCCATGGGGGCCCA
Motif Score 3.643047619
Cell/Tissue List HEK293T; hNPCs; A549; GM12878; Huh7
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000522448.5; ENST00000519508.6; ENST00000522754.1; ENST00000522951.5; ENST00000395923.5; ENST00000521599.5; ENST00000220931.11; ENST00000311028.4
External Link RMBase: m6A_site_805413
mod ID: M6ASITE086352 Click to Show/Hide the Full List
mod site chr8:101688847-101688848:- [4]
Sequence GGATGCTGGATTCCCCAAGAACAAGTTACCCTCTGGGGTGA
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; hNPCs; A549; GM12878; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395923.5; ENST00000521599.5; ENST00000522754.1; ENST00000519508.6; ENST00000220931.11; ENST00000522448.5; ENST00000311028.4; ENST00000522951.5
External Link RMBase: m6A_site_805414
mod ID: M6ASITE086353 Click to Show/Hide the Full List
mod site chr8:101688920-101688921:- [4]
Sequence GCTTTTGTTTGAAAGACAAAACTCCCCACCTGAATCTGTTG
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T; hNPCs; A549; GM12878; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000521599.5; ENST00000311028.4; ENST00000395923.5; ENST00000522951.5; ENST00000522754.1; ENST00000522448.5; ENST00000519508.6; ENST00000220931.11
External Link RMBase: m6A_site_805415
mod ID: M6ASITE086354 Click to Show/Hide the Full List
mod site chr8:101688925-101688926:- [4]
Sequence AAGGGGCTTTTGTTTGAAAGACAAAACTCCCCACCTGAATC
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; hNPCs; A549; GM12878; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395923.5; ENST00000522448.5; ENST00000521599.5; ENST00000519508.6; ENST00000522951.5; ENST00000522754.1; ENST00000220931.11; ENST00000311028.4
External Link RMBase: m6A_site_805416
mod ID: M6ASITE086355 Click to Show/Hide the Full List
mod site chr8:101688979-101688980:- [8]
Sequence GTTGGGGCAAAAGAAGGGAAACCCATCCAGTCCTGTGATTC
Motif Score 2.185083333
Cell/Tissue List HEK293T; hNPCs; A549; GM12878; Huh7
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000220931.11; ENST00000395923.5; ENST00000519508.6; ENST00000311028.4; ENST00000522448.5; ENST00000522754.1; ENST00000521599.5; ENST00000522951.5
External Link RMBase: m6A_site_805417
mod ID: M6ASITE086356 Click to Show/Hide the Full List
mod site chr8:101689007-101689008:- [8]
Sequence TCTCTGTTCTAAAACGTAAGACTCGGGGGTTGGGGCAAAAG
Motif Score 3.319380952
Cell/Tissue List hNPCs; A549; GM12878; Huh7
Seq Type List m6A-seq; m6A-CLIP/IP; MeRIP-seq
Transcript ID List ENST00000522951.5; ENST00000311028.4; ENST00000522448.5; ENST00000521599.5; ENST00000522754.1; ENST00000395923.5; ENST00000519508.6; ENST00000220931.11
External Link RMBase: m6A_site_805418
mod ID: M6ASITE086357 Click to Show/Hide the Full List
mod site chr8:101689094-101689095:- [6]
Sequence TGTGCTTGTGGAGAGCATGGACAGACTTCGTGGTGTTCATT
Motif Score 3.643047619
Cell/Tissue List HEK293T; brain; A549; GM12878; Huh7; MSC
Seq Type List MeRIP-seq; m6A-REF-seq; m6A-seq
Transcript ID List ENST00000220931.11; ENST00000395923.5; ENST00000519508.6; ENST00000521599.5; ENST00000522448.5; ENST00000311028.4; ENST00000522951.5; ENST00000522754.1
External Link RMBase: m6A_site_805423
mod ID: M6ASITE086358 Click to Show/Hide the Full List
mod site chr8:101689222-101689223:-
Sequence TTTTTTTTTTTTTTTGCCAAACAATATCAATGGTGATGCCG
Motif Score 2.20572619
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000519508.6; ENST00000522754.1; ENST00000522448.5; ENST00000220931.11; ENST00000521599.5; ENST00000522951.5; ENST00000395923.5; ENST00000311028.4
External Link RMBase: m6A_site_805424
mod ID: M6ASITE086359 Click to Show/Hide the Full List
mod site chr8:101689401-101689402:- [7]
Sequence TCCTCTTGCTTCCTAGGAAAACTCTCCCTGGAAGAGTTCAT
Motif Score 2.627720238
Cell/Tissue List Huh7; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000395923.5; ENST00000220931.11; ENST00000522448.5; ENST00000521599.5; ENST00000311028.4; ENST00000519508.6; ENST00000522951.5; ENST00000522754.1
External Link RMBase: m6A_site_805425
mod ID: M6ASITE086360 Click to Show/Hide the Full List
mod site chr8:101692804-101692805:- [7]
Sequence AAAGATCTTCCGCCAGATGGACACCAATAGAGACGGTAGGA
Motif Score 3.643047619
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000522754.1; ENST00000521599.5; ENST00000522448.5; ENST00000519508.6; ENST00000311028.4; ENST00000395923.5; ENST00000220931.11; ENST00000522951.5
External Link RMBase: m6A_site_805426
mod ID: M6ASITE086361 Click to Show/Hide the Full List
mod site chr8:101692829-101692830:- [7]
Sequence AGTCAACCCCAGAGAAAAGAACAGAAAAGATCTTCCGCCAG
Motif Score 2.951386905
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000311028.4; ENST00000521599.5; ENST00000220931.11; ENST00000522754.1; ENST00000395923.5; ENST00000522448.5; ENST00000519508.6; ENST00000522951.5
External Link RMBase: m6A_site_805427
mod ID: M6ASITE086362 Click to Show/Hide the Full List
mod site chr8:101694352-101694353:- [9]
Sequence CAGGGTTGGTCCTGAGCAAGACTGTAAAGCAGCTCAGGTGA
Motif Score 3.319380952
Cell/Tissue List GM12878; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000220931.11; ENST00000522754.1; ENST00000521599.5; ENST00000520690.5; ENST00000522448.5; ENST00000522951.5; ENST00000519508.6; ENST00000311028.4; ENST00000395923.5
External Link RMBase: m6A_site_805428
mod ID: M6ASITE086363 Click to Show/Hide the Full List
mod site chr8:101694380-101694381:- [9]
Sequence TTATCCAGAACATGTTAGGAACTTCTGGCAGGGTTGGTCCT
Motif Score 3.373380952
Cell/Tissue List GM12878; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000521599.5; ENST00000522448.5; ENST00000522754.1; ENST00000311028.4; ENST00000522951.5; ENST00000395923.5; ENST00000519508.6; ENST00000520690.5; ENST00000220931.11
External Link RMBase: m6A_site_805429
mod ID: M6ASITE086364 Click to Show/Hide the Full List
mod site chr8:101719387-101719388:- [4]
Sequence AAATGGAGATGGGACAATAGACTTTAGAGAATTCATCATCG
Motif Score 3.319380952
Cell/Tissue List HeLa; A549; Brain; hNPCs; GM12878; LCLs; MM6; Huh7; iSLK; MSC; TREX
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000518727.5; ENST00000517531.5; ENST00000311028.4; ENST00000523923.5; ENST00000522951.5; ENST00000520690.5; ENST00000517822.5; ENST00000522448.5; ENST00000395923.5; ENST00000522252.5; ENST00000521964.5; ENST00000520425.5; ENST00000521599.5; ENST00000519508.6; ENST00000524209.5; ENST00000519098.5; ENST00000518166.5; ENST00000220931.11
External Link RMBase: m6A_site_805430
mod ID: M6ASITE086365 Click to Show/Hide the Full List
mod site chr8:101719394-101719395:- [4]
Sequence TCGATGCAAATGGAGATGGGACAATAGACTTTAGAGAATTC
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; A549; hESC-HEK293T; hNPCs; GM12878; LCLs; MM6; Huh7; iSLK; MSC; TREX; AML
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000522252.5; ENST00000524209.5; ENST00000520690.5; ENST00000522951.5; ENST00000517531.5; ENST00000311028.4; ENST00000220931.11; ENST00000521599.5; ENST00000522448.5; ENST00000520425.5; ENST00000519098.5; ENST00000518166.5; ENST00000519508.6; ENST00000523923.5; ENST00000521964.5; ENST00000518727.5; ENST00000517822.5; ENST00000395923.5
External Link RMBase: m6A_site_805431
mod ID: M6ASITE086366 Click to Show/Hide the Full List
mod site chr8:101719468-101719469:- [4]
Sequence GTTTAAGAAAATATATGGGAACTTTTTCCCTTATGGGGATG
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; A549; H1B; hNPCs; GM12878; LCLs; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000522448.5; ENST00000519098.5; ENST00000517822.5; ENST00000519508.6; ENST00000522951.5; ENST00000518166.5; ENST00000522252.5; ENST00000521964.5; ENST00000520690.5; ENST00000518727.5; ENST00000311028.4; ENST00000395923.5; ENST00000220931.11; ENST00000518661.5; ENST00000520346.1; ENST00000517531.5; ENST00000521599.5; ENST00000520425.5; ENST00000523923.5; ENST00000524209.5
External Link RMBase: m6A_site_805432
mod ID: M6ASITE086367 Click to Show/Hide the Full List
mod site chr8:101719506-101719507:- [4]
Sequence TTGAGAGACTGCCCCAGTGGACATTTGTCAATGGAAGAGTT
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; brain; A549; hESC-HEK293T; H1B; hNPCs; GM12878; LCLs; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000524209.5; ENST00000520690.5; ENST00000523923.5; ENST00000519098.5; ENST00000522206.5; ENST00000520425.5; ENST00000519508.6; ENST00000522448.5; ENST00000395923.5; ENST00000522951.5; ENST00000521964.5; ENST00000517822.5; ENST00000220931.11; ENST00000518661.5; ENST00000311028.4; ENST00000520346.1; ENST00000522252.5; ENST00000518727.5; ENST00000517531.5; ENST00000518166.5; ENST00000521599.5
External Link RMBase: m6A_site_805433
mod ID: M6ASITE086368 Click to Show/Hide the Full List
mod site chr8:101719519-101719520:- [4]
Sequence GTATAAAGGCTTCTTGAGAGACTGCCCCAGTGGACATTTGT
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; A549; H1B; hNPCs; GM12878; LCLs; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000518166.5; ENST00000311028.4; ENST00000522951.5; ENST00000518661.5; ENST00000517531.5; ENST00000521599.5; ENST00000521964.5; ENST00000520346.1; ENST00000520690.5; ENST00000523923.5; ENST00000520425.5; ENST00000517822.5; ENST00000524209.5; ENST00000522206.5; ENST00000519098.5; ENST00000519508.6; ENST00000522252.5; ENST00000395923.5; ENST00000220931.11; ENST00000518727.5; ENST00000522448.5
External Link RMBase: m6A_site_805434
mod ID: M6ASITE086369 Click to Show/Hide the Full List
mod site chr8:101719567-101719568:- [4]
Sequence GGACTTGCTGGAAAGCACAGACTTTACAGAGCATGAGATCC
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; A549; H1B; hNPCs; GM12878; LCLs; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TREX; endometrial; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000520690.5; ENST00000523923.5; ENST00000522252.5; ENST00000395923.5; ENST00000518166.5; ENST00000311028.4; ENST00000522951.5; ENST00000517531.5; ENST00000518727.5; ENST00000521599.5; ENST00000524209.5; ENST00000519098.5; ENST00000520425.5; ENST00000518661.5; ENST00000519508.6; ENST00000522206.5; ENST00000517822.5; ENST00000220931.11; ENST00000521964.5; ENST00000522448.5; ENST00000520346.1
External Link RMBase: m6A_site_805435
mod ID: M6ASITE086370 Click to Show/Hide the Full List
mod site chr8:101719585-101719586:- [4]
Sequence GCGCCCGGAGGTCATGCAGGACTTGCTGGAAAGCACAGACT
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; H1B; hNPCs; GM12878; LCLs; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TREX; endometrial; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000521964.5; ENST00000311028.4; ENST00000521599.5; ENST00000522448.5; ENST00000517531.5; ENST00000518166.5; ENST00000522951.5; ENST00000518727.5; ENST00000518661.5; ENST00000517822.5; ENST00000520690.5; ENST00000524137.5; ENST00000520425.5; ENST00000524209.5; ENST00000395923.5; ENST00000522252.5; ENST00000220931.11; ENST00000520346.1; ENST00000523923.5; ENST00000519098.5; ENST00000519508.6; ENST00000522206.5
External Link RMBase: m6A_site_805436
mod ID: M6ASITE086371 Click to Show/Hide the Full List
mod site chr8:101719615-101719616:- [4]
Sequence CGCCAGGATGGGGAAACAGAACAGCAAGCTGCGCCCGGAGG
Motif Score 2.951386905
Cell/Tissue List HeLa; A549; H1B; hNPCs; GM12878; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TREX; endometrial; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000522078.5; ENST00000523923.5; ENST00000518661.5; ENST00000311028.4; ENST00000519098.5; ENST00000522448.5; ENST00000522252.5; ENST00000518166.5; ENST00000520346.1; ENST00000524137.5; ENST00000395923.5; ENST00000220931.11; ENST00000520425.5; ENST00000517822.5; ENST00000522951.5; ENST00000521964.5; ENST00000517531.5; ENST00000522206.5; ENST00000519508.6; ENST00000520690.5; ENST00000524209.5; ENST00000521599.5; ENST00000518727.5
External Link RMBase: m6A_site_805437
mod ID: M6ASITE086372 Click to Show/Hide the Full List
mod site chr8:101719620-101719621:- [4]
Sequence CTTGCCGCCAGGATGGGGAAACAGAACAGCAAGCTGCGCCC
Motif Score 2.20572619
Cell/Tissue List HeLa; A549; H1B; hNPCs; GM12878; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TREX; endometrial; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000517531.5; ENST00000522252.5; ENST00000220931.11; ENST00000523923.5; ENST00000524137.5; ENST00000395923.5; ENST00000520425.5; ENST00000522951.5; ENST00000522448.5; ENST00000522078.5; ENST00000521599.5; ENST00000520346.1; ENST00000518166.5; ENST00000524209.5; ENST00000519098.5; ENST00000517822.5; ENST00000523645.5; ENST00000518727.5; ENST00000522206.5; ENST00000311028.4; ENST00000518661.5; ENST00000519508.6; ENST00000521964.5; ENST00000520690.5
External Link RMBase: m6A_site_805438
mod ID: M6ASITE086373 Click to Show/Hide the Full List
mod site chr8:101721282-101721283:- [4]
Sequence GTAGCAGGAGGGAGACAGAAACAAACCCCAGAATGCGTGAA
Motif Score 2.20572619
Cell/Tissue List HeLa; GM12878; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000520690.5; ENST00000518166.5; ENST00000524209.5; ENST00000522951.5; ENST00000522206.5; ENST00000518727.5; ENST00000517822.5; ENST00000519098.5; ENST00000521599.5; ENST00000311028.4; ENST00000520425.5; ENST00000517531.5; ENST00000518661.5; ENST00000522078.5; ENST00000520346.1; ENST00000220931.11; ENST00000523923.5; ENST00000524137.5; ENST00000523645.5; ENST00000521964.5; ENST00000522448.5; ENST00000395923.5; ENST00000522252.5
External Link RMBase: m6A_site_805439
mod ID: M6ASITE086374 Click to Show/Hide the Full List
mod site chr8:101721288-101721289:- [4]
Sequence GACTGTGTAGCAGGAGGGAGACAGAAACAAACCCCAGAATG
Motif Score 2.897386905
Cell/Tissue List HeLa; GM12878; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000520690.5; ENST00000518661.5; ENST00000518727.5; ENST00000311028.4; ENST00000522078.5; ENST00000517531.5; ENST00000395923.5; ENST00000519098.5; ENST00000520425.5; ENST00000521599.5; ENST00000518166.5; ENST00000520346.1; ENST00000522951.5; ENST00000522448.5; ENST00000523645.5; ENST00000220931.11; ENST00000517822.5; ENST00000524209.5; ENST00000524137.5; ENST00000522206.5; ENST00000522252.5; ENST00000521964.5; ENST00000523923.5
External Link RMBase: m6A_site_805440
mod ID: M6ASITE086375 Click to Show/Hide the Full List
mod site chr8:101788697-101788698:- [7]
Sequence TAACCCGTTTGGTGCTGTGGACCTCTTTGGCAGCCTGGTGA
Motif Score 3.622404762
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000220931.11; ENST00000520425.5; ENST00000523923.5; ENST00000521957.1; ENST00000520346.1; ENST00000522448.5; ENST00000520690.5; ENST00000524137.5; ENST00000524101.1; ENST00000395923.5; ENST00000523645.5; ENST00000517531.5; ENST00000522252.5; ENST00000521371.1; ENST00000517822.5; ENST00000518661.5; ENST00000518952.5; ENST00000521964.5; ENST00000522951.5; ENST00000518166.5; ENST00000521599.5; ENST00000518727.5; ENST00000519098.5; ENST00000522206.5; ENST00000522078.5; ENST00000311028.4; ENST00000524209.5
External Link RMBase: m6A_site_805441
mod ID: M6ASITE086376 Click to Show/Hide the Full List
mod site chr8:101788724-101788725:- [7]
Sequence TATTTTGTGTATAGTTTCGGACATTCTTAACCCGTTTGGTG
Motif Score 3.643047619
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000520425.5; ENST00000311028.4; ENST00000517531.5; ENST00000518952.5; ENST00000521957.1; ENST00000521599.5; ENST00000524137.5; ENST00000524209.5; ENST00000519098.5; ENST00000520690.5; ENST00000518166.5; ENST00000522448.5; ENST00000521964.5; ENST00000517822.5; ENST00000518661.5; ENST00000220931.11; ENST00000523645.5; ENST00000524101.1; ENST00000523923.5; ENST00000522951.5; ENST00000522252.5; ENST00000395923.5; ENST00000518727.5; ENST00000521371.1; ENST00000522078.5; ENST00000522206.5; ENST00000520346.1
External Link RMBase: m6A_site_805442
mod ID: M6ASITE086377 Click to Show/Hide the Full List
mod site chr8:101788766-101788767:- [7]
Sequence AGGAACGAGGTACTCTAGAAACCTGGCTGTTGCATTATTAA
Motif Score 2.185083333
Cell/Tissue List Huh7; TREX
Seq Type List MeRIP-seq
Transcript ID List ENST00000524101.1; ENST00000522951.5; ENST00000522448.5; ENST00000519098.5; ENST00000517822.5; ENST00000524209.5; ENST00000523923.5; ENST00000522252.5; ENST00000518166.5; ENST00000523645.5; ENST00000522078.5; ENST00000521964.5; ENST00000520425.5; ENST00000518952.5; ENST00000518661.5; ENST00000220931.11; ENST00000521957.1; ENST00000521371.1; ENST00000521599.5; ENST00000311028.4; ENST00000520690.5; ENST00000524137.5; ENST00000395923.5; ENST00000517531.5; ENST00000518727.5; ENST00000522206.5; ENST00000520346.1
External Link RMBase: m6A_site_805443
mod ID: M6ASITE086378 Click to Show/Hide the Full List
mod site chr8:101788837-101788838:- [7]
Sequence AATCATTTTACAGCATTGAGACTATGTTGATTTCAAGGTCA
Motif Score 3.319380952
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000220931.11; ENST00000523645.5; ENST00000311028.4; ENST00000524137.5; ENST00000521964.5; ENST00000522206.5; ENST00000517531.5; ENST00000517822.5; ENST00000519098.5; ENST00000521371.1; ENST00000518727.5; ENST00000524101.1; ENST00000522252.5; ENST00000518952.5; ENST00000520346.1; ENST00000395923.5; ENST00000518166.5; ENST00000521599.5; ENST00000520425.5; ENST00000523923.5; ENST00000518661.5; ENST00000522951.5; ENST00000520690.5; ENST00000522078.5; ENST00000522448.5; ENST00000521957.1; ENST00000524209.5
External Link RMBase: m6A_site_805444
mod ID: M6ASITE086379 Click to Show/Hide the Full List
mod site chr8:101788868-101788869:- [7]
Sequence GGAAAATAAGAGAAAAAAAGACTGTCATCAGAATCATTTTA
Motif Score 3.319380952
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000522951.5; ENST00000522206.5; ENST00000517531.5; ENST00000524137.5; ENST00000519098.5; ENST00000520690.5; ENST00000520425.5; ENST00000518661.5; ENST00000521964.5; ENST00000311028.4; ENST00000518727.5; ENST00000522448.5; ENST00000395923.5; ENST00000523923.5; ENST00000520346.1; ENST00000518166.5; ENST00000517822.5; ENST00000524101.1; ENST00000522078.5; ENST00000521957.1; ENST00000220931.11; ENST00000521599.5; ENST00000523645.5; ENST00000522252.5; ENST00000518952.5; ENST00000524209.5; ENST00000521371.1
External Link RMBase: m6A_site_805445
mod ID: M6ASITE086380 Click to Show/Hide the Full List
mod site chr8:101790891-101790892:- [8]
Sequence CCAGGGGCTGCAGAGCATGGACTGTTAAATCTTGCACTTCT
Motif Score 4.065041667
Cell/Tissue List A549
Seq Type List m6A-seq
Transcript ID List ENST00000521599.5; ENST00000523923.5; ENST00000519098.5; ENST00000395923.5; ENST00000521957.1; ENST00000521371.1; ENST00000522252.5; ENST00000517531.5; ENST00000522448.5; ENST00000311028.4; ENST00000523645.5; ENST00000520346.1; ENST00000518661.5; ENST00000522206.5; ENST00000517822.5; ENST00000518727.5; ENST00000518166.5; ENST00000522078.5; ENST00000524101.1; ENST00000518952.5; ENST00000522951.5; ENST00000220931.11; ENST00000521964.5; ENST00000520425.5; ENST00000520690.5; ENST00000524209.5
External Link RMBase: m6A_site_805446
mod ID: M6ASITE086381 Click to Show/Hide the Full List
mod site chr8:101790938-101790939:- [8]
Sequence GAGAATCTGGTGGATGCTGGACCTTGCTGCTGCTGCTACTG
Motif Score 3.622404762
Cell/Tissue List A549
Seq Type List m6A-seq
Transcript ID List ENST00000522448.5; ENST00000518661.5; ENST00000517531.5; ENST00000521957.1; ENST00000522206.5; ENST00000522078.5; ENST00000518727.5; ENST00000521599.5; ENST00000220931.11; ENST00000520690.5; ENST00000523923.5; ENST00000521964.5; ENST00000518952.5; ENST00000522252.5; ENST00000520346.1; ENST00000522951.5; ENST00000523645.5; ENST00000518166.5; ENST00000519098.5; ENST00000524209.5; ENST00000517822.5; ENST00000395923.5; ENST00000311028.4; ENST00000521371.1; ENST00000520425.5
External Link RMBase: m6A_site_805447