m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00649)
Target Name Flap endonuclease 1 (FEN1)
Synonyms
FEN-1; DNase IV; Flap structure-specific endonuclease 1; Maturation factor 1; MF1; hFEN-1
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Gene Name FEN1
Chromosomal Location 11q12.2
Family XPG/RAD2 endonuclease family, FEN1 subfamily
Function
Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome stabilization factor that prevents flaps from equilibrating into structures that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA, and exhibits RNase H activity. Also involved in replication and repair of rDNA and in repairing mitochondrial DNA.
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Gene ID 2237
Uniprot ID
FEN1_HUMAN
HGNC ID
HGNC:3650
KEGG ID
hsa:2237
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
FEN1 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2) [READER]
 Regulator Info 
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary IGF2BP2 overexpression promoted HCC proliferation in vitro and in vivo, IGF2BP2 directly recognized and bound to the m6A site on FEN1 mRNA and enhanced Flap endonuclease 1 (FEN1) mRNA stability.
Target Regulation Up regulation
Responsed Disease Hepatocellular carcinoma ICD-11: 2C12.02
 Disease Info 
In-vitro Model PLC/PRF/5 Adult hepatocellular carcinoma Homo sapiens CVCL_0485
MHCC97-L Adult hepatocellular carcinoma Homo sapiens CVCL_4973
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
In-vivo Model A total of 40 BALB/c nude mice were chosen and assigned to two groups: shCtrl group (injected with HepG2 cells) and shIGF2BP2 group (injected with HepG2 cells with IGF2BP2 knockdown). 200 ul of the above cell suspension containing 2 × 105 cells was injected into the left or right back of each mice.
Liver cancer [ICD-11: 2C12]
 Disease Info 
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary IGF2BP2 overexpression promoted HCC proliferation in vitro and in vivo, IGF2BP2 directly recognized and bound to the m6A site on FEN1 mRNA and enhanced Flap endonuclease 1 (FEN1) mRNA stability.
Responsed Disease Hepatocellular carcinoma [ICD-11: 2C12.02]
Target Regulator Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2) READER
 Regulator Info 
Target Regulation Up regulation
In-vitro Model PLC/PRF/5 Adult hepatocellular carcinoma Homo sapiens CVCL_0485
MHCC97-L Adult hepatocellular carcinoma Homo sapiens CVCL_4973
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
In-vivo Model A total of 40 BALB/c nude mice were chosen and assigned to two groups: shCtrl group (injected with HepG2 cells) and shIGF2BP2 group (injected with HepG2 cells with IGF2BP2 knockdown). 200 ul of the above cell suspension containing 2 × 105 cells was injected into the left or right back of each mice.
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00649)
Flap endonuclease 1 (FEN1)
N4-acetylcytidine (ac4C)
In total 1 m6A sequence/site(s) in this target gene
mod ID: AC4SITE000154 Click to Show/Hide the Full List
mod site chr11:61796128-61796129:+ [2]
Sequence ATCCAGAAGCACAAGAGCATCGAGGAGATCGTGCGGCGACT
Cell/Tissue List H1
Seq Type List ac4C-seq
Transcript ID List ENST00000305885.3; ENST00000535307.1; ENST00000574708.5
External Link RMBase: ac4C_site_295
5-methylcytidine (m5C)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE005155 Click to Show/Hide the Full List
mod site chr11:61796704-61796705:+ [3]
Sequence GTACTTTTCCTTTTTTAGCTCAGGAAAATATGTCAGGCTCA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000535307.1; ENST00000305885.3; ENST00000574708.5
External Link RMBase: m5C_site_7501
N6-methyladenosine (m6A)
In total 44 m6A sequence/site(s) in this target gene
mod ID: M6ASITE005766 Click to Show/Hide the Full List
mod site chr11:61792963-61792964:+ [4]
Sequence GAAGGGAGAGCGAGCTTAGGACCGCCTGCCCGGGGCAACCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; H1B; H1A; MT4; H1299; MM6; Jurkat; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000535723.1; ENST00000305885.3
External Link RMBase: m6A_site_143184
mod ID: M6ASITE005767 Click to Show/Hide the Full List
mod site chr11:61792987-61792988:+ [4]
Sequence CCTGCCCGGGGCAACCCCGAACCAAGCTTTAGCCGCCGAGG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; A549; H1B; H1A; MT4; H1299; MM6; Jurkat; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000305885.3; ENST00000574708.5; ENST00000535723.1
External Link RMBase: m6A_site_143185
mod ID: M6ASITE005768 Click to Show/Hide the Full List
mod site chr11:61793033-61793034:+ [4]
Sequence TGTCCCAAAGGCCAGGTGAGACCCCATGGGAAGCGCCTCCG
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; A549; H1B; H1A; MT4; H1299; MM6; Jurkat; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000535723.1; ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143186
mod ID: M6ASITE005769 Click to Show/Hide the Full List
mod site chr11:61795384-61795385:+ [5]
Sequence GGAATTCAAGGCCTGGCCAAACTAATTGCTGATGTGGCCCC
Motif Score 2.627720238
Cell/Tissue List HEK293T; A549; HeLa; peripheral-blood
Seq Type List DART-seq; MeRIP-seq; m6A-seq
Transcript ID List ENST00000535723.1; ENST00000574708.5; ENST00000305885.3
External Link RMBase: m6A_site_143188
mod ID: M6ASITE005770 Click to Show/Hide the Full List
mod site chr11:61795425-61795426:+ [6]
Sequence CAGTGCCATCCGGGAGAATGACATCAAGAGCTACTTTGGCC
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000535723.1; ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143189
mod ID: M6ASITE005772 Click to Show/Hide the Full List
mod site chr11:61795538-61795539:+ [7]
Sequence TGCAGAATGAGGAGGGTGAGACCACCAGCCACCTGATGGGC
Motif Score 2.876744048
Cell/Tissue List HepG2; HeLa; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000574708.5; ENST00000305885.3; ENST00000535723.1
External Link RMBase: m6A_site_143190
mod ID: M6ASITE005773 Click to Show/Hide the Full List
mod site chr11:61795770-61795771:+ [6]
Sequence GGTGAAGGTCACTAAGCAGCACAATGATGAGTGCAAACATC
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000574708.5; ENST00000305885.3; ENST00000535723.1
External Link RMBase: m6A_site_143191
mod ID: M6ASITE005774 Click to Show/Hide the Full List
mod site chr11:61795786-61795787:+ [4]
Sequence CAGCACAATGATGAGTGCAAACATCTGCTGAGCCTCATGGG
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; MM6; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000535723.1; ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143192
mod ID: M6ASITE005775 Click to Show/Hide the Full List
mod site chr11:61795825-61795826:+ [5]
Sequence GGCATCCCTTATCTTGATGCACCCAGTGAGGCAGAGGCCAG
Motif Score 2.809946429
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000574708.5; ENST00000535723.1; ENST00000305885.3
External Link RMBase: m6A_site_143193
mod ID: M6ASITE005776 Click to Show/Hide the Full List
mod site chr11:61795896-61795897:+ [4]
Sequence CTATGCTGCGGCTACCGAGGACATGGACTGCCTCACCTTCG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143194
mod ID: M6ASITE005777 Click to Show/Hide the Full List
mod site chr11:61795902-61795903:+ [4]
Sequence TGCGGCTACCGAGGACATGGACTGCCTCACCTTCGGCAGCC
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143195
mod ID: M6ASITE005778 Click to Show/Hide the Full List
mod site chr11:61795910-61795911:+ [5]
Sequence CCGAGGACATGGACTGCCTCACCTTCGGCAGCCCTGTGCTA
Motif Score 2.026654762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000574708.5; ENST00000305885.3
External Link RMBase: m6A_site_143196
mod ID: M6ASITE005779 Click to Show/Hide the Full List
mod site chr11:61795936-61795937:+ [5]
Sequence GGCAGCCCTGTGCTAATGCGACACCTGACTGCCAGTGAAGC
Motif Score 2.865571429
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143197
mod ID: M6ASITE005780 Click to Show/Hide the Full List
mod site chr11:61795943-61795944:+ [5]
Sequence CTGTGCTAATGCGACACCTGACTGCCAGTGAAGCCAAAAAG
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000535307.1; ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143198
mod ID: M6ASITE005781 Click to Show/Hide the Full List
mod site chr11:61796016-61796017:+ [4]
Sequence TCTGCAGGAGCTGGGCCTGAACCAGGAACAGTTTGTGGATC
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000305885.3; ENST00000574708.5; ENST00000535307.1
External Link RMBase: m6A_site_143199
mod ID: M6ASITE005783 Click to Show/Hide the Full List
mod site chr11:61796023-61796024:+ [4]
Sequence GAGCTGGGCCTGAACCAGGAACAGTTTGTGGATCTGTGCAT
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000574708.5; ENST00000305885.3; ENST00000535307.1
External Link RMBase: m6A_site_143200
mod ID: M6ASITE005784 Click to Show/Hide the Full List
mod site chr11:61796103-61796104:+ [4]
Sequence TGGGCCCAAGCGGGCTGTGGACCTCATCCAGAAGCACAAGA
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000305885.3; ENST00000535307.1; ENST00000574708.5
External Link RMBase: m6A_site_143201
mod ID: M6ASITE005785 Click to Show/Hide the Full List
mod site chr11:61796118-61796119:+ [5]
Sequence TGTGGACCTCATCCAGAAGCACAAGAGCATCGAGGAGATCG
Motif Score 2.830589286
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000535307.1; ENST00000574708.5; ENST00000305885.3
External Link RMBase: m6A_site_143202
mod ID: M6ASITE005786 Click to Show/Hide the Full List
mod site chr11:61796215-61796216:+ [4]
Sequence GCTCACCAGCTCTTCTTGGAACCTGAGGTGCTGGACCCAGA
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000535307.1; ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143203
mod ID: M6ASITE005787 Click to Show/Hide the Full List
mod site chr11:61796229-61796230:+ [4]
Sequence CTTGGAACCTGAGGTGCTGGACCCAGAGTCTGTGGAGCTGA
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000574708.5; ENST00000535307.1; ENST00000305885.3
External Link RMBase: m6A_site_143204
mod ID: M6ASITE005788 Click to Show/Hide the Full List
mod site chr11:61796437-61796438:+ [4]
Sequence GCTAAGCGCAAGGAGCCAGAACCCAAGGGATCCACTAAGAA
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000574708.5; ENST00000535307.1; ENST00000305885.3
External Link RMBase: m6A_site_143205
mod ID: M6ASITE005789 Click to Show/Hide the Full List
mod site chr11:61796468-61796469:+ [4]
Sequence CCACTAAGAAGAAGGCAAAGACTGGGGCAGCAGGGAAGTTT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000574708.5; ENST00000305885.3; ENST00000535307.1
External Link RMBase: m6A_site_143206
mod ID: M6ASITE005790 Click to Show/Hide the Full List
mod site chr11:61796554-61796555:+ [5]
Sequence CAGAATATTTGCCGTCTTGTACCCTTAAGAGCTACAGCTAG
Motif Score 2.8355
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000305885.3; ENST00000535307.1; ENST00000574708.5
External Link RMBase: m6A_site_143207
mod ID: M6ASITE005791 Click to Show/Hide the Full List
mod site chr11:61796567-61796568:+ [8]
Sequence GTCTTGTACCCTTAAGAGCTACAGCTAGAGAAACCTTCACG
Motif Score 2.078666667
Cell/Tissue List HEK293; HEK293T
Seq Type List m6A-REF-seq; DART-seq
Transcript ID List ENST00000574708.5; ENST00000305885.3; ENST00000535307.1
External Link RMBase: m6A_site_143208
mod ID: M6ASITE005792 Click to Show/Hide the Full List
mod site chr11:61796579-61796580:+ [9]
Sequence TAAGAGCTACAGCTAGAGAAACCTTCACGGGGTGGAGAGAG
Motif Score 2.185083333
Cell/Tissue List HepG2; HEK293T; HeLa; A549; U2OS; hESCs; H1299; MM6; Huh7; peripheral-blood; HEK293A-TOA; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000574708.5; ENST00000305885.3; ENST00000535307.1
External Link RMBase: m6A_site_143209
mod ID: M6ASITE005794 Click to Show/Hide the Full List
mod site chr11:61796585-61796586:+ [5]
Sequence CTACAGCTAGAGAAACCTTCACGGGGTGGAGAGAGGATTCT
Motif Score 2.021232143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000535307.1; ENST00000574708.5; ENST00000305885.3
External Link RMBase: m6A_site_143210
mod ID: M6ASITE005795 Click to Show/Hide the Full List
mod site chr11:61796623-61796624:+ [5]
Sequence TCTAAGGCTTTTCTAGCGTGACCCTTTTCAGTAGTGCTAGT
Motif Score 2.839113095
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000535307.1; ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143211
mod ID: M6ASITE005796 Click to Show/Hide the Full List
mod site chr11:61796726-61796727:+ [10]
Sequence GGAAAATATGTCAGGCTCAAACCACTTCTCAGGCAGTTTAA
Motif Score 2.185083333
Cell/Tissue List HEK293T; HeLa; U2OS; Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000574708.5; ENST00000305885.3; ENST00000535307.1
External Link RMBase: m6A_site_143212
mod ID: M6ASITE005797 Click to Show/Hide the Full List
mod site chr11:61796750-61796751:+ [4]
Sequence CTTCTCAGGCAGTTTAATGGACACTAAGTCCATTGTTACAT
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; U2OS; A549; Huh7
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000535307.1; ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143213
mod ID: M6ASITE005798 Click to Show/Hide the Full List
mod site chr11:61796752-61796753:+ [5]
Sequence TCTCAGGCAGTTTAATGGACACTAAGTCCATTGTTACATGA
Motif Score 2.506922619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000574708.5; ENST00000305885.3; ENST00000535307.1
External Link RMBase: m6A_site_143214
mod ID: M6ASITE005799 Click to Show/Hide the Full List
mod site chr11:61796767-61796768:+ [5]
Sequence TGGACACTAAGTCCATTGTTACATGAAAGTGATAGATAGCA
Motif Score 2.07285119
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000574708.5; ENST00000305885.3; ENST00000535307.1
External Link RMBase: m6A_site_143215
mod ID: M6ASITE005800 Click to Show/Hide the Full List
mod site chr11:61796788-61796789:+ [5]
Sequence CATGAAAGTGATAGATAGCAACAAGTTTTGGAGAAGAGAGA
Motif Score 2.173910714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000574708.5; ENST00000535307.1; ENST00000305885.3
External Link RMBase: m6A_site_143216
mod ID: M6ASITE005801 Click to Show/Hide the Full List
mod site chr11:61796827-61796828:+ [4]
Sequence GAGGGAGATAAAAGGGGGAGACAAAAGATGTACAGAAATGA
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000305885.3; ENST00000574708.5; ENST00000535307.1
External Link RMBase: m6A_site_143217
mod ID: M6ASITE005802 Click to Show/Hide the Full List
mod site chr11:61796838-61796839:+ [5]
Sequence AAGGGGGAGACAAAAGATGTACAGAAATGATTTCCTGGCTG
Motif Score 2.856142857
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000305885.3; ENST00000535307.1; ENST00000574708.5
External Link RMBase: m6A_site_143218
mod ID: M6ASITE005803 Click to Show/Hide the Full List
mod site chr11:61796863-61796864:+ [5]
Sequence AATGATTTCCTGGCTGGCCAACTGGTGGCCAGTGGGAGGTG
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000305885.3; ENST00000535307.1; ENST00000574708.5
External Link RMBase: m6A_site_143219
mod ID: M6ASITE005805 Click to Show/Hide the Full List
mod site chr11:61796891-61796892:+ [4]
Sequence CCAGTGGGAGGTGATGGTGGACCTAGACTGTGCTTTTCTGT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000305885.3; ENST00000535307.1; ENST00000574708.5
External Link RMBase: m6A_site_143220
mod ID: M6ASITE005806 Click to Show/Hide the Full List
mod site chr11:61796897-61796898:+ [4]
Sequence GGAGGTGATGGTGGACCTAGACTGTGCTTTTCTGTCTTGTT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000305885.3; ENST00000535307.1; ENST00000574708.5
External Link RMBase: m6A_site_143221
mod ID: M6ASITE005807 Click to Show/Hide the Full List
mod site chr11:61796978-61796979:+ [4]
Sequence CATCTTAGCAGATGGGAGGAACTGCTGAGAGAAGATGGGCA
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000535307.1; ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143222
mod ID: M6ASITE005808 Click to Show/Hide the Full List
mod site chr11:61797047-61797048:+ [5]
Sequence GTCTGTGTTTGTGACTGATTACTGGCTGTGTCTTGGGTGGG
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000305885.3; rmsk_3561490; ENST00000574708.5; ENST00000535307.1
External Link RMBase: m6A_site_143223
mod ID: M6ASITE005809 Click to Show/Hide the Full List
mod site chr11:61797073-61797074:+ [4]
Sequence TGTGTCTTGGGTGGGCAGAAACTCGAACTTGCTATGTAATT
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000535307.1; ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143224
mod ID: M6ASITE005810 Click to Show/Hide the Full List
mod site chr11:61797079-61797080:+ [4]
Sequence TTGGGTGGGCAGAAACTCGAACTTGCTATGTAATTTGTGTC
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000535307.1; ENST00000305885.3; ENST00000574708.5
External Link RMBase: m6A_site_143225
mod ID: M6ASITE005811 Click to Show/Hide the Full List
mod site chr11:61797155-61797156:+ [4]
Sequence TGGCAATCAGCTGAGTTGAGACTTTGGAATAAGACACTGGT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1B; hESCs; GM12878; LCLs; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000535307.1; ENST00000574708.5; ENST00000305885.3
External Link RMBase: m6A_site_143226
mod ID: M6ASITE005812 Click to Show/Hide the Full List
mod site chr11:61797168-61797169:+ [4]
Sequence AGTTGAGACTTTGGAATAAGACACTGGTTTTCATGCGCTGT
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1B; hESCs; GM12878; LCLs; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq; MAZTER-seq
Transcript ID List ENST00000574708.5; ENST00000535307.1; ENST00000305885.3
External Link RMBase: m6A_site_143227
mod ID: M6ASITE005813 Click to Show/Hide the Full List
mod site chr11:61797170-61797171:+ [5]
Sequence TTGAGACTTTGGAATAAGACACTGGTTTTCATGCGCTGTTT
Motif Score 2.506922619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000305885.3; ENST00000535307.1; ENST00000574708.5
External Link RMBase: m6A_site_143228