m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00550)
Target Name E3 ubiquitin-protein ligase TRIM7 (TRIM7)
Synonyms
Glycogenin-interacting protein; RING finger protein 90; Tripartite motif-containing protein 7
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Gene Name TRIM7
Chromosomal Location 5q35.3
Family TRIM/RBCC family
Function
E3 ubiquitin-protein ligase. Mediates 'Lys-63'-linked polyubiquitination and stabilization of the JUN coactivator RNF187 in response to growth factor signaling via the MEK/ERK pathway, thereby regulating JUN transactivation and cellular proliferation. Promotes the TLR4-mediated signaling activation through its E3 ligase domain leading to production of pro-inflammatory cytokines and type I interferon (By similarity). Plays also a negative role in the regulation of exogenous cytosolic DNA virus-triggered immune response. Mechanistically, enhances the 'Lys-48'-linked ubiquitination of STING1 leading to its proteasome-dependent degradation.
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Gene ID 81786
Uniprot ID
TRIM7_HUMAN
HGNC ID
HGNC:16278
KEGG ID
hsa:81786
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
TRIM7 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Methyltransferase-like 3 (METTL3) [WRITER]
 Regulator Info 
Representative RNA-seq result indicating the expression of this target gene regulated by METTL3
Cell Line ARPE-19 cell line Homo sapiens
Treatment: shMETTL3 ARPE-19 cells
Control: shControl ARPE-19 cells
 GSE202017
Regulation
logFC: -1.54E+00
p-value: 1.28E-03
More Results Click to View More RNA-seq Results
Representative RIP-seq result supporting the interaction between TRIM7 and the regulator
Cell Line MDA-MB-231 Homo sapiens
Regulation logFC: 7.18E+00 GSE60213
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary E3 ubiquitin-protein ligase TRIM7 (TRIM7) mRNA stability was regulated by the METTL3/14-YTHDF2-mRNA in a decay-dependent manner. TRIM7 plays a key role in regulating metastasis and chemoresistance in osteosarcoma through ubiquitination of BRMS1.
Target Regulation Down regulation
Responsed Disease Osteosarcoma ICD-11: 2B51
 Disease Info 
Pathway Response Ubiquitin mediated proteolysis hsa04120
Cell Process Proteasome pathway degradation
In-vitro Model U2OS Osteosarcoma Homo sapiens CVCL_0042
SaOS-2 Osteosarcoma Homo sapiens CVCL_0548
MG-63 Osteosarcoma Homo sapiens CVCL_0426
HOS Osteosarcoma Homo sapiens CVCL_0312
hFOB 1.19 Normal Homo sapiens CVCL_3708
In-vivo Model MG63 cells transduced with lentivirus expressing shTRIM7 or shNC, and SAOS2 cells transduced with lentivirus expressing TRIM7, BRMS1, TRIM7 plus BRMS1 or control vector, were injected via the tail vein into the nude mice (1 × 106 cells/mouse) (n = 11 per group).
Methyltransferase-like 14 (METTL14) [WRITER]
 Regulator Info 
Representative RNA-seq result indicating the expression of this target gene regulated by METTL14
Cell Line mouse embryonic stem cells Mus musculus
Treatment: METTL14-/- ESCs
Control: Wild type ESCs
 GSE145309
Regulation
logFC: -1.06E+00
p-value: 1.08E-12
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary E3 ubiquitin-protein ligase TRIM7 (TRIM7) mRNA stability was regulated by the METTL3/14-YTHDF2-mRNA in a decay-dependent manner. TRIM7 plays a key role in regulating metastasis and chemoresistance in osteosarcoma through ubiquitination of BRMS1.
Target Regulation Down regulation
Responsed Disease Osteosarcoma ICD-11: 2B51
 Disease Info 
Pathway Response Ubiquitin mediated proteolysis hsa04120
Cell Process Proteasome pathway degradation
In-vitro Model U2OS Osteosarcoma Homo sapiens CVCL_0042
SaOS-2 Osteosarcoma Homo sapiens CVCL_0548
MG-63 Osteosarcoma Homo sapiens CVCL_0426
HOS Osteosarcoma Homo sapiens CVCL_0312
hFOB 1.19 Normal Homo sapiens CVCL_3708
In-vivo Model MG63 cells transduced with lentivirus expressing shTRIM7 or shNC, and SAOS2 cells transduced with lentivirus expressing TRIM7, BRMS1, TRIM7 plus BRMS1 or control vector, were injected via the tail vein into the nude mice (1 × 106 cells/mouse) (n = 11 per group).
YTH domain-containing family protein 2 (YTHDF2) [READER]
 Regulator Info 
Representative RNA-seq result indicating the expression of this target gene regulated by YTHDF2
Cell Line Mouse-cerebellum granule cell Mus musculus
Treatment: YTHDF2 knockdown mouse-cerebellum granule cell
Control: Wild type mouse-cerebellum granule cell
 GSE153688
Regulation
logFC: 1.15E+00
p-value: 8.92E-03
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary E3 ubiquitin-protein ligase TRIM7 (TRIM7) mRNA stability was regulated by the METTL3/14-YTHDF2-mRNA in a decay-dependent manner. TRIM7 plays a key role in regulating metastasis and chemoresistance in osteosarcoma through ubiquitination of BRMS1.
Target Regulation Down regulation
Responsed Disease Osteosarcoma ICD-11: 2B51
 Disease Info 
Pathway Response Ubiquitin mediated proteolysis hsa04120
Cell Process Proteasome pathway degradation
In-vitro Model U2OS Osteosarcoma Homo sapiens CVCL_0042
SaOS-2 Osteosarcoma Homo sapiens CVCL_0548
MG-63 Osteosarcoma Homo sapiens CVCL_0426
HOS Osteosarcoma Homo sapiens CVCL_0312
hFOB 1.19 Normal Homo sapiens CVCL_3708
In-vivo Model MG63 cells transduced with lentivirus expressing shTRIM7 or shNC, and SAOS2 cells transduced with lentivirus expressing TRIM7, BRMS1, TRIM7 plus BRMS1 or control vector, were injected via the tail vein into the nude mice (1 × 106 cells/mouse) (n = 11 per group).
Osteosarcoma [ICD-11: 2B51]
 Disease Info 
In total 2 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary E3 ubiquitin-protein ligase TRIM7 (TRIM7) mRNA stability was regulated by the METTL3/14-YTHDF2-mRNA in a decay-dependent manner. TRIM7 plays a key role in regulating metastasis and chemoresistance in osteosarcoma through ubiquitination of BRMS1.
Responsed Disease Osteosarcoma [ICD-11: 2B51]
Target Regulator Methyltransferase-like 14 (METTL14) WRITER
 Regulator Info 
Target Regulation Down regulation
Pathway Response Ubiquitin mediated proteolysis hsa04120
Cell Process Proteasome pathway degradation
In-vitro Model U2OS Osteosarcoma Homo sapiens CVCL_0042
SaOS-2 Osteosarcoma Homo sapiens CVCL_0548
MG-63 Osteosarcoma Homo sapiens CVCL_0426
HOS Osteosarcoma Homo sapiens CVCL_0312
hFOB 1.19 Normal Homo sapiens CVCL_3708
In-vivo Model MG63 cells transduced with lentivirus expressing shTRIM7 or shNC, and SAOS2 cells transduced with lentivirus expressing TRIM7, BRMS1, TRIM7 plus BRMS1 or control vector, were injected via the tail vein into the nude mice (1 × 106 cells/mouse) (n = 11 per group).
Experiment 2 Reporting the m6A-centered Disease Response [1]
Response Summary E3 ubiquitin-protein ligase TRIM7 (TRIM7) mRNA stability was regulated by the METTL3/14-YTHDF2-mRNA in a decay-dependent manner. TRIM7 plays a key role in regulating metastasis and chemoresistance in osteosarcoma through ubiquitination of BRMS1.
Responsed Disease Osteosarcoma [ICD-11: 2B51]
Target Regulator YTH domain-containing family protein 2 (YTHDF2) READER
 Regulator Info 
Target Regulation Down regulation
Pathway Response Ubiquitin mediated proteolysis hsa04120
Cell Process Proteasome pathway degradation
In-vitro Model U2OS Osteosarcoma Homo sapiens CVCL_0042
SaOS-2 Osteosarcoma Homo sapiens CVCL_0548
MG-63 Osteosarcoma Homo sapiens CVCL_0426
HOS Osteosarcoma Homo sapiens CVCL_0312
hFOB 1.19 Normal Homo sapiens CVCL_3708
In-vivo Model MG63 cells transduced with lentivirus expressing shTRIM7 or shNC, and SAOS2 cells transduced with lentivirus expressing TRIM7, BRMS1, TRIM7 plus BRMS1 or control vector, were injected via the tail vein into the nude mice (1 × 106 cells/mouse) (n = 11 per group).
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00550)
E3 ubiquitin-protein ligase TRIM7 (TRIM7)
5-methylcytidine (m5C)
In total 22 m6A sequence/site(s) in this target gene
mod ID: M5CSITE003720 Click to Show/Hide the Full List
mod site chr5:181194411-181194412:-
Sequence GGATAAGGAGAGCAAAGCTTCTGGAACTTTATTTACTCTTT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000393315.5; ENST00000504241.1; ENST00000274773.12
External Link RMBase: m5C_site_36714
mod ID: M5CSITE003721 Click to Show/Hide the Full List
mod site chr5:181194419-181194420:-
Sequence CGCTGCTTGGATAAGGAGAGCAAAGCTTCTGGAACTTTATT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504241.1; ENST00000393315.5; ENST00000274773.12
External Link RMBase: m5C_site_36715
mod ID: M5CSITE003722 Click to Show/Hide the Full List
mod site chr5:181194437-181194438:-
Sequence CCAGTGCCAAAGTACAAACGCTGCTTGGATAAGGAGAGCAA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504241.1; ENST00000393315.5; ENST00000274773.12
External Link RMBase: m5C_site_36716
mod ID: M5CSITE003723 Click to Show/Hide the Full List
mod site chr5:181194443-181194444:-
Sequence CACTTTCCAGTGCCAAAGTACAAACGCTGCTTGGATAAGGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504241.1; ENST00000393315.5; ENST00000274773.12
External Link RMBase: m5C_site_36717
mod ID: M5CSITE003724 Click to Show/Hide the Full List
mod site chr5:181194450-181194451:-
Sequence ACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m5C_site_36718
mod ID: M5CSITE003725 Click to Show/Hide the Full List
mod site chr5:181194451-181194452:-
Sequence GACTCCCGCACTTTCCAGTGCCAAAGTACAAACGCTGCTTG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504241.1; ENST00000393315.5; ENST00000274773.12
External Link RMBase: m5C_site_36719
mod ID: M5CSITE003726 Click to Show/Hide the Full List
mod site chr5:181194457-181194458:-
Sequence ACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTACAAACGC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504241.1; ENST00000393315.5; ENST00000274773.12
External Link RMBase: m5C_site_36720
mod ID: M5CSITE003727 Click to Show/Hide the Full List
mod site chr5:181194463-181194464:-
Sequence TCACAAACCCCTGACTCCCGCACTTTCCAGTGCCAAAGTAC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504241.1; ENST00000274773.12; ENST00000393315.5
External Link RMBase: m5C_site_36721
mod ID: M5CSITE003728 Click to Show/Hide the Full List
mod site chr5:181194465-181194466:-
Sequence TCTCACAAACCCCTGACTCCCGCACTTTCCAGTGCCAAAGT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504241.1; ENST00000274773.12; ENST00000393315.5
External Link RMBase: m5C_site_36722
mod ID: M5CSITE003729 Click to Show/Hide the Full List
mod site chr5:181194467-181194468:-
Sequence GCTCTCACAAACCCCTGACTCCCGCACTTTCCAGTGCCAAA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000274773.12; ENST00000504241.1; ENST00000393315.5
External Link RMBase: m5C_site_36723
mod ID: M5CSITE003730 Click to Show/Hide the Full List
mod site chr5:181194469-181194470:-
Sequence GTGCTCTCACAAACCCCTGACTCCCGCACTTTCCAGTGCCA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504241.1; ENST00000393315.5; ENST00000274773.12
External Link RMBase: m5C_site_36724
mod ID: M5CSITE003731 Click to Show/Hide the Full List
mod site chr5:181194473-181194474:-
Sequence ACACGTGCTCTCACAAACCCCTGACTCCCGCACTTTCCAGT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504241.1; ENST00000274773.12; ENST00000393315.5
External Link RMBase: m5C_site_36725
mod ID: M5CSITE003732 Click to Show/Hide the Full List
mod site chr5:181194474-181194475:-
Sequence AACACGTGCTCTCACAAACCCCTGACTCCCGCACTTTCCAG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m5C_site_36726
mod ID: M5CSITE003733 Click to Show/Hide the Full List
mod site chr5:181194480-181194481:-
Sequence ACAACCAACACGTGCTCTCACAAACCCCTGACTCCCGCACT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000274773.12; ENST00000393315.5; ENST00000504241.1
External Link RMBase: m5C_site_36727
mod ID: M5CSITE003734 Click to Show/Hide the Full List
mod site chr5:181194482-181194483:-
Sequence CGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCGCA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m5C_site_36728
mod ID: M5CSITE003735 Click to Show/Hide the Full List
mod site chr5:181194484-181194485:-
Sequence TGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCCCG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m5C_site_36729
mod ID: M5CSITE003736 Click to Show/Hide the Full List
mod site chr5:181194486-181194487:-
Sequence AATGCGACAACCAACACGTGCTCTCACAAACCCCTGACTCC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504241.1; ENST00000274773.12; ENST00000393315.5
External Link RMBase: m5C_site_36730
mod ID: M5CSITE003737 Click to Show/Hide the Full List
mod site chr5:181194492-181194493:-
Sequence CTGACCAATGCGACAACCAACACGTGCTCTCACAAACCCCT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000274773.12; ENST00000504241.1; ENST00000393315.5
External Link RMBase: m5C_site_36731
mod ID: M5CSITE003738 Click to Show/Hide the Full List
mod site chr5:181194495-181194496:-
Sequence ATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAACC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000274773.12; ENST00000393315.5; ENST00000504241.1
External Link RMBase: m5C_site_36732
mod ID: M5CSITE003739 Click to Show/Hide the Full List
mod site chr5:181194496-181194497:-
Sequence CATCCTGACCAATGCGACAACCAACACGTGCTCTCACAAAC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000274773.12; ENST00000393315.5; ENST00000504241.1
External Link RMBase: m5C_site_36733
mod ID: M5CSITE003740 Click to Show/Hide the Full List
mod site chr5:181194499-181194500:-
Sequence GTGCATCCTGACCAATGCGACAACCAACACGTGCTCTCACA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000274773.12; ENST00000393315.5; ENST00000504241.1
External Link RMBase: m5C_site_36734
mod ID: M5CSITE003741 Click to Show/Hide the Full List
mod site chr5:181204887-181204888:-
Sequence CCACCCGCGCGCCCCCCTTCCCACTGCCCTGTCCGCAGTGC
Cell/Tissue List muscle; HeLa
Seq Type List Bisulfite-seq; m5C-RIP-seq
Transcript ID List ENST00000334421.5; ENST00000274773.12
External Link RMBase: m5C_site_36735
N6-methyladenosine (m6A)
In total 46 m6A sequence/site(s) in this target gene
mod ID: M6ASITE073034 Click to Show/Hide the Full List
mod site chr5:181193941-181193942:- [2]
Sequence GGTGAGGAGATGAAAATGAAACTATGAGCTGTCTTTGGAGT
Motif Score 2.627720238
Cell/Tissue List HeLa; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m6A_site_702502
mod ID: M6ASITE073035 Click to Show/Hide the Full List
mod site chr5:181194141-181194142:- [2]
Sequence CACAAATATGCTCCTGACGGACTCAGGAAAATGCCAACAGC
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; HepG2; GM12878; LCLs; Jurkat; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000274773.12; ENST00000504241.1; ENST00000393315.5
External Link RMBase: m6A_site_702503
mod ID: M6ASITE073036 Click to Show/Hide the Full List
mod site chr5:181194174-181194175:- [2]
Sequence AAAGATGCAGCCAGCTCTAAACAACACACAGAGCACAAATA
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; A549; HepG2; LCLs; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m6A_site_702504
mod ID: M6ASITE073037 Click to Show/Hide the Full List
mod site chr5:181194218-181194219:- [2]
Sequence CTGGAACTTTGAAACACAAAACACAAGTTGGCACTTACAAT
Motif Score 2.20572619
Cell/Tissue List HeLa; A549; HEK293T; HepG2; LCLs; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000274773.12; ENST00000393315.5; ENST00000504241.1
External Link RMBase: m6A_site_702505
mod ID: M6ASITE073038 Click to Show/Hide the Full List
mod site chr5:181194225-181194226:- [2]
Sequence TTTGCTTCTGGAACTTTGAAACACAAAACACAAGTTGGCAC
Motif Score 2.20572619
Cell/Tissue List HeLa; A549; HEK293T; LCLs; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m6A_site_702506
mod ID: M6ASITE073039 Click to Show/Hide the Full List
mod site chr5:181194233-181194234:- [2]
Sequence TTTTTGTTTTTGCTTCTGGAACTTTGAAACACAAAACACAA
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; HEK293T; LCLs; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000274773.12; ENST00000393315.5; ENST00000504241.1
External Link RMBase: m6A_site_702507
mod ID: M6ASITE073040 Click to Show/Hide the Full List
mod site chr5:181194257-181194258:- [2]
Sequence GTGTGAGCCGCTGTACCCGAACTTTTTTTGTTTTTGCTTCT
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; LCLs; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m6A_site_702509
mod ID: M6ASITE073042 Click to Show/Hide the Full List
mod site chr5:181194333-181194334:- [2]
Sequence GTTGCCCAGGCTGGTCTTGAACTCCTGGCCTCAAGTGATCC
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m6A_site_702511
mod ID: M6ASITE073043 Click to Show/Hide the Full List
mod site chr5:181194368-181194369:- [2]
Sequence TTTTAATTTTCTTTTAAGAGACTGGGTCTTGCTATGTTGCC
Motif Score 3.319380952
Cell/Tissue List HeLa; A549; TIME; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m6A_site_702514
mod ID: M6ASITE073044 Click to Show/Hide the Full List
mod site chr5:181194406-181194407:- [2]
Sequence AGGAGAGCAAAGCTTCTGGAACTTTATTTACTCTTTCTTTT
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; Jurkat; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000504241.1; ENST00000274773.12; ENST00000393315.5
External Link RMBase: m6A_site_702515
mod ID: M6ASITE073045 Click to Show/Hide the Full List
mod site chr5:181194477-181194478:- [2]
Sequence ACCAACACGTGCTCTCACAAACCCCTGACTCCCGCACTTTC
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; A549; HepG2; LCLs; H1299; Jurkat; GSC-11; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m6A_site_702516
mod ID: M6ASITE073046 Click to Show/Hide the Full List
mod site chr5:181194581-181194582:- [2]
Sequence CTTTGAGTGACAAGCCCGGGACAACAGCCAGTGGGCATCAC
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; A549; HepG2; H1A; fibroblasts; LCLs; H1299; Jurkat; GSC-11; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m6A_site_702517
mod ID: M6ASITE073047 Click to Show/Hide the Full List
mod site chr5:181194614-181194615:- [2]
Sequence TGGGCCAGAACTGGAAGGAGACATCTGTCCCGTCTTTGAGT
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; A549; HepG2; H1A; fibroblasts; LCLs; Jurkat; GSC-11; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000422067.2; ENST00000393315.5; ENST00000393319.7; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m6A_site_702518
mod ID: M6ASITE073048 Click to Show/Hide the Full List
mod site chr5:181194625-181194626:- [2]
Sequence AGAGGACAGTCTGGGCCAGAACTGGAAGGAGACATCTGTCC
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; H1A; fibroblasts; LCLs; Jurkat; GSC-11; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000422067.2; ENST00000393315.5; ENST00000393319.7; ENST00000274773.12; ENST00000504241.1
External Link RMBase: m6A_site_702519
mod ID: M6ASITE073050 Click to Show/Hide the Full List
mod site chr5:181194640-181194641:- [2]
Sequence CTGTGCTCCCAGCTCAGAGGACAGTCTGGGCCAGAACTGGA
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; A549; HepG2; H1A; fibroblasts; LCLs; Jurkat; GSC-11; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000393319.7; ENST00000274773.12; ENST00000504241.1; ENST00000393315.5; ENST00000422067.2
External Link RMBase: m6A_site_702520
mod ID: M6ASITE073051 Click to Show/Hide the Full List
mod site chr5:181194708-181194709:- [2]
Sequence CTGCCTTGAGAGGTTGTGGGACCTCTGGATCCAGCTGACCT
Motif Score 3.622404762
Cell/Tissue List HeLa; A549; HEK293T; HepG2; fibroblasts; LCLs; Jurkat; GSC-11; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000504241.1; ENST00000393315.5; ENST00000422067.2; ENST00000393319.7; ENST00000274773.12
External Link RMBase: m6A_site_702521
mod ID: M6ASITE073052 Click to Show/Hide the Full List
mod site chr5:181194741-181194742:- [2]
Sequence TCATGGCTGCTGCCTTCTGGACAGCTGCCAGCTCTGCCTTG
Motif Score 3.643047619
Cell/Tissue List HeLa; A549; HEK293T; HepG2; Jurkat; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000504241.1; ENST00000274773.12; ENST00000422067.2; ENST00000393319.7; ENST00000393315.5
External Link RMBase: m6A_site_702522
mod ID: M6ASITE073053 Click to Show/Hide the Full List
mod site chr5:181194835-181194836:- [2]
Sequence AGGGTGCCTGGCTCCCTAAAACAATGTCAAAGCCAGTCCTG
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; A549; HepG2; GM12878; Jurkat; GSC-11; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000422067.2; ENST00000393315.5; ENST00000393319.7; ENST00000504241.1; ENST00000274773.12
External Link RMBase: m6A_site_702523
mod ID: M6ASITE073054 Click to Show/Hide the Full List
mod site chr5:181194972-181194973:- [2]
Sequence CAGGGGAACAGGGGCTTTGGACTCCTGAGGGTGTTCCCTTC
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; HepG2; fibroblasts; GM12878; LCLs; Jurkat; GSC-11; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000274773.12; ENST00000393315.5; ENST00000422067.2; ENST00000504241.1; ENST00000393319.7
External Link RMBase: m6A_site_702524
mod ID: M6ASITE073055 Click to Show/Hide the Full List
mod site chr5:181194985-181194986:- [2]
Sequence GTGGCCAACCGAGCAGGGGAACAGGGGCTTTGGACTCCTGA
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; A549; HepG2; fibroblasts; GM12878; LCLs; MM6; Jurkat; GSC-11; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000504241.1; ENST00000422067.2; ENST00000274773.12; ENST00000393319.7; ENST00000393315.5
External Link RMBase: m6A_site_702525
mod ID: M6ASITE073056 Click to Show/Hide the Full List
mod site chr5:181194998-181194999:- [3]
Sequence CAGGAGAGTGACTGTGGCCAACCGAGCAGGGGAACAGGGGC
Motif Score 2.153267857
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000393315.5; ENST00000422067.2; ENST00000393319.7; ENST00000504241.1; ENST00000274773.12
External Link RMBase: m6A_site_702526
mod ID: M6ASITE073057 Click to Show/Hide the Full List
mod site chr5:181195032-181195033:- [2]
Sequence CCCAAGAGAGCCTGCTACAGACACAACCCCGAGGCAGGAGA
Motif Score 2.897386905
Cell/Tissue List HeLa; A549; hESC-HEK293T; HepG2; MM6; Jurkat; GSC-11; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000274773.12; ENST00000393315.5; ENST00000422067.2; ENST00000504241.1; ENST00000393319.7
External Link RMBase: m6A_site_702527
mod ID: M6ASITE073058 Click to Show/Hide the Full List
mod site chr5:181195265-181195266:- [2]
Sequence GTCCTTCTACGCTGTGGAGGACATGCGCCACCTCTACACCT
Motif Score 3.643047619
Cell/Tissue List HeLa; A549; Jurkat; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000504241.1; ENST00000393319.7; ENST00000393315.5; ENST00000422067.2; ENST00000274773.12
External Link RMBase: m6A_site_702528
mod ID: M6ASITE073059 Click to Show/Hide the Full List
mod site chr5:181195304-181195305:- [4]
Sequence GCGCGTGCGGGTGGCCCTGGACCTGGAGGTGGGAGCCGTGT
Motif Score 3.622404762
Cell/Tissue List HeLa; Jurkat
Seq Type List m6A-seq
Transcript ID List ENST00000422067.2; ENST00000393315.5; ENST00000504241.1; ENST00000393319.7; ENST00000274773.12
External Link RMBase: m6A_site_702529
mod ID: M6ASITE073061 Click to Show/Hide the Full List
mod site chr5:181195586-181195587:- [2]
Sequence CCTCGGCGAGCGGGCCCAGGACCTGCCCAACCACCCCTGCC
Motif Score 3.622404762
Cell/Tissue List HeLa; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000393315.5; ENST00000504241.1; ENST00000422067.2; ENST00000393319.7; ENST00000274773.12
External Link RMBase: m6A_site_702530
mod ID: M6ASITE073062 Click to Show/Hide the Full List
mod site chr5:181195702-181195703:- [2]
Sequence AGGGGCCTGGCTGCGTGGGGACATTTCTCCCTGTCTCTGTC
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000393319.7; ENST00000422067.2; ENST00000504241.1
External Link RMBase: m6A_site_702531
mod ID: M6ASITE073063 Click to Show/Hide the Full List
mod site chr5:181195730-181195731:- [2]
Sequence TCGGGCGCGGCCCTGCAAAGACTGTGCCAGGGGCCTGGCTG
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000504241.1; ENST00000274773.12; ENST00000393315.5; ENST00000393319.7; ENST00000422067.2
External Link RMBase: m6A_site_702532
mod ID: M6ASITE073064 Click to Show/Hide the Full List
mod site chr5:181199882-181199883:- [2]
Sequence TCAGCAGCCAGATCCAGGAGACAGCTCAAAAGCCTGACCTT
Motif Score 2.897386905
Cell/Tissue List HeLa; Jurkat; GSC-11; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000422067.2; ENST00000393315.5; ENST00000274773.12; ENST00000393319.7
External Link RMBase: m6A_site_702535
mod ID: M6ASITE073065 Click to Show/Hide the Full List
mod site chr5:181199944-181199945:- [2]
Sequence GGCACAGAAGCAGAATGAGAACCTGGCCCAGCTCGGGGTTG
Motif Score 2.930744048
Cell/Tissue List HeLa; Jurkat; GSC-11; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000422067.2; ENST00000274773.12; ENST00000393315.5; ENST00000393319.7
External Link RMBase: m6A_site_702537
mod ID: M6ASITE073066 Click to Show/Hide the Full List
mod site chr5:181199979-181199980:- [2]
Sequence CTGCTAGGCCGCCTGGAGGAACTGTCCCGGGAGGTGGCACA
Motif Score 3.373380952
Cell/Tissue List HeLa; Jurkat; GSC-11; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000393315.5; ENST00000422067.2; ENST00000393319.7; ENST00000274773.12
External Link RMBase: m6A_site_702538
mod ID: M6ASITE073067 Click to Show/Hide the Full List
mod site chr5:181200078-181200079:- [2]
Sequence CTTCTCCTCCTGGGACAGAAACAGATGGCAGCGGAGCAGGA
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000393319.7; ENST00000274773.12; ENST00000393315.5; ENST00000422067.2
External Link RMBase: m6A_site_702539
mod ID: M6ASITE073069 Click to Show/Hide the Full List
mod site chr5:181200084-181200085:- [2]
Sequence CTCCAACTTCTCCTCCTGGGACAGAAACAGATGGCAGCGGA
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000274773.12; ENST00000393319.7; ENST00000393315.5; ENST00000422067.2
External Link RMBase: m6A_site_702540
mod ID: M6ASITE073070 Click to Show/Hide the Full List
mod site chr5:181203326-181203327:- [5]
Sequence GCTAAAATAATTATTGCAAAACAACTGGCTTAAACTGGAGC
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List MeRIP-seq
Transcript ID List ENST00000422067.2; ENST00000509199.1; ENST00000274773.12; ENST00000393315.5; ENST00000334421.5
External Link RMBase: m6A_site_702541
mod ID: M6ASITE073071 Click to Show/Hide the Full List
mod site chr5:181203374-181203375:- [5]
Sequence TCCACATAATTGTTGTACAAACCAGAGCTTTTTAAAGTGAA
Motif Score 2.185083333
Cell/Tissue List HeLa; A549; HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000422067.2; ENST00000334421.5; ENST00000274773.12; ENST00000393315.5; ENST00000509199.1
External Link RMBase: m6A_site_702542
mod ID: M6ASITE073072 Click to Show/Hide the Full List
mod site chr5:181203444-181203445:- [2]
Sequence GTTGGAGTGTGTGCTATGGAACCGCAGAATCGATTTCAGAA
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; LCLs; Jurkat; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000422067.2; ENST00000334421.5; ENST00000393315.5; ENST00000274773.12; ENST00000509199.1
External Link RMBase: m6A_site_702543
mod ID: M6ASITE073073 Click to Show/Hide the Full List
mod site chr5:181203493-181203494:- [2]
Sequence GACATTACAGAGGCCTGAGAACTCAGCACCAGGGCTCGGTG
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1A; LCLs; MM6; Jurkat; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000422067.2; ENST00000274773.12; ENST00000334421.5; ENST00000393315.5; ENST00000509199.1
External Link RMBase: m6A_site_702544
mod ID: M6ASITE073074 Click to Show/Hide the Full List
mod site chr5:181203512-181203513:- [2]
Sequence ACCCGCAGGCCCCCCGTGGGACATTACAGAGGCCTGAGAAC
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1A; LCLs; MM6; Jurkat; GSC-11; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000509199.1; ENST00000393315.5; ENST00000274773.12; ENST00000334421.5; ENST00000422067.2
External Link RMBase: m6A_site_702545
mod ID: M6ASITE073075 Click to Show/Hide the Full List
mod site chr5:181203593-181203594:- [2]
Sequence CTTGAAGAAGGAACTGGAGGACTGTGAGGTGTTCCGGTCCA
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; U2OS; H1A; A549; Jurkat; GSC-11; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000393315.5; ENST00000274773.12; ENST00000509199.1; ENST00000334421.5; ENST00000422067.2
External Link RMBase: m6A_site_702546
mod ID: M6ASITE073076 Click to Show/Hide the Full List
mod site chr5:181203601-181203602:- [2]
Sequence CTGAGGGTCTTGAAGAAGGAACTGGAGGACTGTGAGGTGTT
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; U2OS; H1A; A549; Jurkat; GSC-11; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000334421.5; ENST00000274773.12; ENST00000422067.2; ENST00000393315.5; ENST00000509199.1
External Link RMBase: m6A_site_702547
mod ID: M6ASITE073077 Click to Show/Hide the Full List
mod site chr5:181203811-181203812:- [2]
Sequence TGGGGAAGCAAGATCCCGAGACCTTCAGAGTCACCTCGCAG
Motif Score 2.876744048
Cell/Tissue List HeLa; U2OS; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000274773.12; ENST00000422067.2; ENST00000393315.5; ENST00000334421.5; ENST00000509199.1
External Link RMBase: m6A_site_702548
mod ID: M6ASITE073078 Click to Show/Hide the Full List
mod site chr5:181204147-181204148:- [2]
Sequence TCGTGGAACTGAGTGAGAGGACCTCGCCAAGATGTCCAGGG
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000393315.5; ENST00000422067.2; ENST00000334421.5; ENST00000274773.12
External Link RMBase: m6A_site_702549
mod ID: M6ASITE073080 Click to Show/Hide the Full List
mod site chr5:181204160-181204161:- [2]
Sequence CAAAGTCCCCACCTCGTGGAACTGAGTGAGAGGACCTCGCC
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000274773.12; ENST00000334421.5; ENST00000393315.5; ENST00000422067.2
External Link RMBase: m6A_site_702550
mod ID: M6ASITE073081 Click to Show/Hide the Full List
mod site chr5:181204705-181204706:- [2]
Sequence CGCTGCGGGCAGCATGGCGAACCCTTCAAGCTCTACTGCCA
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000334421.5; ENST00000274773.12
External Link RMBase: m6A_site_702551
mod ID: M6ASITE073082 Click to Show/Hide the Full List
mod site chr5:181205076-181205077:- [2]
Sequence GACCGCGGACCGGCCCCGGAACCGGCGCCGAGGCTCTAGCG
Motif Score 2.930744048
Cell/Tissue List HeLa; Jurkat; GSC-11; HEK293T; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000334421.5; ENST00000274773.12
External Link RMBase: m6A_site_702552
mod ID: M6ASITE073083 Click to Show/Hide the Full List
mod site chr5:181205088-181205089:- [2]
Sequence TGGCGGCTGTGGGACCGCGGACCGGCCCCGGAACCGGCGCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; Jurkat; GSC-11; HEK293T; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000334421.5; ENST00000274773.12
External Link RMBase: m6A_site_702553
mod ID: M6ASITE073084 Click to Show/Hide the Full List
mod site chr5:181205095-181205096:- [2]
Sequence GCGCGCATGGCGGCTGTGGGACCGCGGACCGGCCCCGGAAC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; Jurkat; GSC-11; HEK293T; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000274773.12; ENST00000334421.5
External Link RMBase: m6A_site_702554