General Information of the m6A Target Gene (ID: M6ATAR00391)
Target Name Splicing factor, proline- and glutamine-rich (SFPQ)
Synonyms
100 kDa DNA-pairing protein; hPOMp100; DNA-binding p52/p100 complex, 100 kDa subunit; Polypyrimidine tract-binding protein-associated-splicing factor; PSF; PTB-associated-splicing factor; PSF
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Gene Name SFPQ
Chromosomal Location 1p34.3
Function
DNA- and RNA binding protein, involved in several nuclear processes. Essential pre-mRNA splicing factor required early in spliceosome formation and for splicing catalytic step II, probably as a heteromer with NONO. Binds to pre-mRNA in spliceosome C complex, and specifically binds to intronic polypyrimidine tracts. Involved in regulation of signal-induced alternative splicing. During splicing of PTPRC/CD45, a phosphorylated form is sequestered by THRAP3 from the pre-mRNA in resting T-cells; T-cell activation and subsequent reduced phosphorylation is proposed to lead to release from THRAP3 allowing binding to pre-mRNA splicing regulatotry elements which represses exon inclusion. Interacts with U5 snRNA, probably by binding to a purine-rich sequence located on the 3' side of U5 snRNA stem 1b. May be involved in a pre-mRNA coupled splicing and polyadenylation process as component of a snRNP-free complex with SNRPA/U1A. The SFPQ-NONO heteromer associated with MATR3 may play a role in nuclear retention of defective RNAs. SFPQ may be involved in homologous DNA pairing; in vitro, promotes the invasion of ssDNA between a duplex DNA and produces a D-loop formation. The SFPQ-NONO heteromer may be involved in DNA unwinding by modulating the function of topoisomerase I/TOP1; in vitro, stimulates dissociation of TOP1 from DNA after cleavage and enhances its jumping between separate DNA helices. The SFPQ-NONO heteromer binds DNA . The SFPQ-NONO heteromer may be involved in DNA non-homologous end joining (NHEJ) required for double-strand break repair and V(D)J recombination and may stabilize paired DNA ends; in vitro, the complex strongly stimulates DNA end joining, binds directly to the DNA substrates and cooperates with the Ku70/G22P1-Ku80/XRCC5 (Ku) dimer to establish a functional preligation complex. SFPQ is involved in transcriptional regulation. Functions as transcriptional activator. Transcriptional repression is mediated by an interaction of SFPQ with SIN3A and subsequent recruitment of histone deacetylases (HDACs). The SFPQ-NONO-NR5A1 complex binds to the CYP17 promoter and regulates basal and cAMP-dependent transcriptional activity. SFPQ isoform Long binds to the DNA binding domains (DBD) of nuclear hormone receptors, like RXRA and probably THRA, and acts as transcriptional corepressor in absence of hormone ligands. Binds the DNA sequence 5'-CTGAGTC-3' in the insulin-like growth factor response element (IGFRE) and inhibits IGF-I-stimulated transcriptional activity. Regulates the circadian clock by repressing the transcriptional activator activity of the CLOCK-ARNTL/BMAL1 heterodimer. Required for the transcriptional repression of circadian target genes, such as PER1, mediated by the large PER complex through histone deacetylation (By similarity). Required for the assembly of nuclear speckles. Plays a role in the regulation of DNA virus-mediated innate immune response by assembling into the HDP-RNP complex, a complex that serves as a platform for IRF3 phosphorylation and subsequent innate immune response activation through the cGAS-STING pathway.
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Gene ID 6421
Uniprot ID
SFPQ_HUMAN
HGNC ID
HGNC:10774
KEGG ID
hsa:6421
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
SFPQ can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Fat mass and obesity-associated protein (FTO) [ERASER]
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary In bladder cancer, the changes in m6A methylation level mainly appeared at 5' untranslated region (5' UTR) of MALAT1 and NOTCH1 transcripts, and at 3' UTR of CSNK2A2 and ITGA6 transcripts, responding to the overexpression of FTO. Splicing factor, proline- and glutamine-rich (SFPQ) could influence the FTO-mediated m6A RNA demethylation, eventually affecting the gene expression.
Responsed Disease Bladder cancer ICD-11: 2C94
Pathway Response Notch signaling pathway hsa04330
Cell Process Cell proliferation
Cell invasion
Cell apoptosis
In-vitro Model HT-1197 Recurrent bladder carcinoma Homo sapiens CVCL_1291
HT-1376 Bladder carcinoma Homo sapiens CVCL_1292
In-vivo Model BALB/cnu/nu mice (4-5 weeks old) were used for the xenograft experiment. The mice were randomly divided into 2 groups (n = 6 for each group) and injected with 5 × 106 HT-1197 cells in control group or FTO plasmid group, respectively.
Bladder cancer [ICD-11: 2C94]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary In bladder cancer, the changes in m6A methylation level mainly appeared at 5' untranslated region (5' UTR) of MALAT1 and NOTCH1 transcripts, and at 3' UTR of CSNK2A2 and ITGA6 transcripts, responding to the overexpression of FTO. Splicing factor, proline- and glutamine-rich (SFPQ) could influence the FTO-mediated m6A RNA demethylation, eventually affecting the gene expression.
Responsed Disease Bladder cancer [ICD-11: 2C94]
Target Regulator Fat mass and obesity-associated protein (FTO) ERASER
Pathway Response Notch signaling pathway hsa04330
Cell Process Cell proliferation
Cell invasion
Cell apoptosis
In-vitro Model HT-1197 Recurrent bladder carcinoma Homo sapiens CVCL_1291
HT-1376 Bladder carcinoma Homo sapiens CVCL_1292
In-vivo Model BALB/cnu/nu mice (4-5 weeks old) were used for the xenograft experiment. The mice were randomly divided into 2 groups (n = 6 for each group) and injected with 5 × 106 HT-1197 cells in control group or FTO plasmid group, respectively.
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00391)
Splicing factor, proline- and glutamine-rich (SFPQ)
N4-acetylcytidine (ac4C)
In total 2 m6A sequence/site(s) in this target gene
mod ID: AC4SITE000198 Click to Show/Hide the Full List
mod site chr1:35188043-35188044:-
Sequence AGGAAGAGATGATGATTCGTCAACGTGAGATGGAAGAACAA
Cell/Tissue List DLD1
Seq Type List acRIP-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6
External Link RMBase: ac4C_site_58
mod ID: AC4SITE000201 Click to Show/Hide the Full List
mod site chr1:35190793-35190794:- [2]
Sequence CTGTTGTAATAGTGGATGATCGTGGAAGATCTACAGGGAAA
Cell/Tissue List H1
Seq Type List ac4C-seq
Transcript ID List ENST00000357214.6
External Link RMBase: ac4C_site_59
5-methylcytidine (m5C)
In total 16 m6A sequence/site(s) in this target gene
mod ID: M5CSITE001467 Click to Show/Hide the Full List
mod site chr1:35183655-35183656:- [3]
Sequence AAAGACCAACAAATCTCAAGCCCTATAAATGGCTTGTATTG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000470472.5; ENST00000460428.5; ENST00000357214.6
External Link RMBase: m5C_site_2076
mod ID: M5CSITE001468 Click to Show/Hide the Full List
mod site chr1:35183659-35183660:- [3]
Sequence TTTAAAAGACCAACAAATCTCAAGCCCTATAAATGGCTTGT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6; ENST00000460428.5
External Link RMBase: m5C_site_2077
mod ID: M5CSITE001469 Click to Show/Hide the Full List
mod site chr1:35183666-35183667:-
Sequence TCTTGTTTTTAAAAGACCAACAAATCTCAAGCCCTATAAAT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6; ENST00000460428.5
External Link RMBase: m5C_site_2078
mod ID: M5CSITE001470 Click to Show/Hide the Full List
mod site chr1:35192259-35192260:- [4]
Sequence AGGGGCCCCCGCCCGGCGGGCCCGGCGGCCGCAGCGAGGAG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2079
mod ID: M5CSITE001471 Click to Show/Hide the Full List
mod site chr1:35192270-35192271:- [4]
Sequence GCAGCATCACCAGGGGCCCCCGCCCGGCGGGCCCGGCGGCC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2080
mod ID: M5CSITE001472 Click to Show/Hide the Full List
mod site chr1:35192271-35192272:- [4]
Sequence AGCAGCATCACCAGGGGCCCCCGCCCGGCGGGCCCGGCGGC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2081
mod ID: M5CSITE001473 Click to Show/Hide the Full List
mod site chr1:35192273-35192274:- [4]
Sequence CCAGCAGCATCACCAGGGGCCCCCGCCCGGCGGGCCCGGCG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2082
mod ID: M5CSITE001474 Click to Show/Hide the Full List
mod site chr1:35192274-35192275:- [4]
Sequence ACCAGCAGCATCACCAGGGGCCCCCGCCCGGCGGGCCCGGC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2083
mod ID: M5CSITE001483 Click to Show/Hide the Full List
mod site chr1:35192348-35192349:- [4]
Sequence TGGCGGCCACCCCAAGCCGCCGCATCGAGGCGGCGGGGAGC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2084
mod ID: M5CSITE001484 Click to Show/Hide the Full List
mod site chr1:35192349-35192350:- [4]
Sequence CTGGCGGCCACCCCAAGCCGCCGCATCGAGGCGGCGGGGAG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2085
mod ID: M5CSITE001485 Click to Show/Hide the Full List
mod site chr1:35192352-35192353:- [4]
Sequence CGCCTGGCGGCCACCCCAAGCCGCCGCATCGAGGCGGCGGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2086
mod ID: M5CSITE001486 Click to Show/Hide the Full List
mod site chr1:35192446-35192447:- [4]
Sequence GGTCCAGGGCCTAAGCAGGGCCCAGGTCCGGGTGGTCCCAA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2087
mod ID: M5CSITE001487 Click to Show/Hide the Full List
mod site chr1:35192468-35192469:- [4]
Sequence GCCCGCGGCAGTCCCGGGCCCGGGTCCAGGGCCTAAGCAGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2088
mod ID: M5CSITE001488 Click to Show/Hide the Full List
mod site chr1:35192469-35192470:- [4]
Sequence CGCCCGCGGCAGTCCCGGGCCCGGGTCCAGGGCCTAAGCAG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2089
mod ID: M5CSITE001489 Click to Show/Hide the Full List
mod site chr1:35192470-35192471:- [4]
Sequence CCGCCCGCGGCAGTCCCGGGCCCGGGTCCAGGGCCTAAGCA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2090
mod ID: M5CSITE001491 Click to Show/Hide the Full List
mod site chr1:35192563-35192564:- [3]
Sequence GCAGTCACCTCGGCCCCTCCCGGGGCGCCGCCACCCACCCC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m5C_site_2091
N6-methyladenosine (m6A)
In total 99 m6A sequence/site(s) in this target gene
mod ID: M6ASITE015532 Click to Show/Hide the Full List
mod site chr1:35176446-35176447:- [5]
Sequence AGGTGAGCTGTGTCCAGAAAACCAACGAGAAGGAGTGGAAG
Motif Score 2.185083333
Cell/Tissue List HeLa; LCLs; Huh7; Jurkat; CD4T; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000466213.5; ENST00000471991.5; ENST00000460428.5; ENST00000485365.1; ENST00000490668.5; ENST00000470472.5; ENST00000468598.5; ENST00000466745.5
External Link RMBase: m6A_site_21326
mod ID: M6ASITE015533 Click to Show/Hide the Full List
mod site chr1:35177235-35177236:- [5]
Sequence ATAACAATACTAATGTGGGAACCATTAATTTTTTATTTTTT
Motif Score 2.930744048
Cell/Tissue List HeLa; Huh7; Jurkat; CD4T; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000466213.5; ENST00000485454.1; ENST00000485365.1; ENST00000468598.5; ENST00000470472.5; ENST00000460428.5; ENST00000466745.5; ENST00000471991.5; ENST00000490668.5
External Link RMBase: m6A_site_21327
mod ID: M6ASITE015534 Click to Show/Hide the Full List
mod site chr1:35177289-35177290:- [6]
Sequence AATGATTCTTAGTCTGTTAAACTGTCTTCAGAAAGGCCCTT
Motif Score 2.627720238
Cell/Tissue List Huh7; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000468598.5; ENST00000470472.5; ENST00000466745.5; ENST00000466213.5; ENST00000490668.5; ENST00000485365.1; ENST00000471991.5; ENST00000485454.1; ENST00000460428.5
External Link RMBase: m6A_site_21328
mod ID: M6ASITE015535 Click to Show/Hide the Full List
mod site chr1:35177330-35177331:- [7]
Sequence GGGAAGCCACAAGCAGACTGACAACGTTTCTAGGTAAGTTA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000468598.5; ENST00000466745.5; ENST00000460428.5; ENST00000466213.5; ENST00000490668.5; ENST00000470472.5; ENST00000485365.1; ENST00000485454.1; ENST00000471991.5
External Link RMBase: m6A_site_21329
mod ID: M6ASITE015536 Click to Show/Hide the Full List
mod site chr1:35177334-35177335:- [8]
Sequence AGGAGGGAAGCCACAAGCAGACTGACAACGTTTCTAGGTAA
Motif Score 3.319380952
Cell/Tissue List MT4; Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000466213.5; ENST00000490668.5; ENST00000485365.1; ENST00000466745.5; ENST00000471991.5; ENST00000470472.5; ENST00000468598.5; ENST00000485454.1; ENST00000460428.5
External Link RMBase: m6A_site_21330
mod ID: M6ASITE015537 Click to Show/Hide the Full List
mod site chr1:35177378-35177379:- [8]
Sequence GTGGATAGATACTTCTCAAGACATCACACAGCGTGAGTCAA
Motif Score 2.897386905
Cell/Tissue List MT4; Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000468598.5; ENST00000485365.1; ENST00000466213.5; ENST00000471991.5; ENST00000485454.1; ENST00000460428.5; ENST00000490668.5; ENST00000470472.5; ENST00000466745.5
External Link RMBase: m6A_site_21331
mod ID: M6ASITE015538 Click to Show/Hide the Full List
mod site chr1:35177994-35177995:- [7]
Sequence TGATATTGGAGTGCTCATTCACATGAAGTAAGTTTCCTTTA
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000466745.5; ENST00000485454.1; ENST00000490668.5; ENST00000460428.5; ENST00000485365.1; ENST00000470472.5; ENST00000466213.5; ENST00000468598.5
External Link RMBase: m6A_site_21332
mod ID: M6ASITE015539 Click to Show/Hide the Full List
mod site chr1:35178270-35178271:- [7]
Sequence AAACTGAGAGTCAGGCTTTTACATTTTAAAGAAAATACAGT
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000468598.5; ENST00000490668.5; ENST00000460428.5; ENST00000485365.1; ENST00000466745.5; ENST00000470472.5; ENST00000466213.5
External Link RMBase: m6A_site_21333
mod ID: M6ASITE015540 Click to Show/Hide the Full List
mod site chr1:35178343-35178344:- [7]
Sequence CAACGTTGTCACATACCTTCACATAAGGGATAGTATATTTT
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000460428.5; ENST00000485365.1; ENST00000468598.5; ENST00000470472.5; ENST00000490668.5; ENST00000466745.5; ENST00000466213.5
External Link RMBase: m6A_site_21334
mod ID: M6ASITE015541 Click to Show/Hide the Full List
mod site chr1:35178353-35178354:- [7]
Sequence TTGGTGAGGTCAACGTTGTCACATACCTTCACATAAGGGAT
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000470472.5; ENST00000466745.5; ENST00000485365.1; ENST00000460428.5; ENST00000466213.5; ENST00000468598.5; ENST00000490668.5
External Link RMBase: m6A_site_21335
mod ID: M6ASITE015544 Click to Show/Hide the Full List
mod site chr1:35178438-35178439:- [7]
Sequence AGCCTGCCTGACAATGGAAGACATACTTGAATGGGGAGCAG
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000460428.5; ENST00000466213.5; ENST00000490668.5; ENST00000470472.5; ENST00000468598.5; ENST00000485365.1; ENST00000466745.5
External Link RMBase: m6A_site_21336
mod ID: M6ASITE015555 Click to Show/Hide the Full List
mod site chr1:35178448-35178449:- [7]
Sequence GAAGGTGGTCAGCCTGCCTGACAATGGAAGACATACTTGAA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000490668.5; ENST00000470472.5; ENST00000460428.5; ENST00000485365.1; ENST00000468598.5; ENST00000466745.5; ENST00000466213.5
External Link RMBase: m6A_site_21337
mod ID: M6ASITE015566 Click to Show/Hide the Full List
mod site chr1:35178852-35178853:- [5]
Sequence GGGCTTGGACTTAAGATAGGACAATGTGGAGAATGGGGGGA
Motif Score 3.643047619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000468598.5; ENST00000490668.5; ENST00000470472.5; ENST00000460428.5; ENST00000485365.1; ENST00000466213.5; ENST00000466745.5
External Link RMBase: m6A_site_21338
mod ID: M6ASITE015573 Click to Show/Hide the Full List
mod site chr1:35178864-35178865:- [5]
Sequence TGAGAGTGAAAAGGGCTTGGACTTAAGATAGGACAATGTGG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000485365.1; ENST00000468598.5; ENST00000490668.5; ENST00000470472.5; ENST00000460428.5; ENST00000466213.5; ENST00000466745.5
External Link RMBase: m6A_site_21339
mod ID: M6ASITE015579 Click to Show/Hide the Full List
mod site chr1:35179167-35179168:- [5]
Sequence CTTTCACTTAATGATTTTGGACAGGTTTTAGAGAGCCAGGA
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000485365.1; ENST00000468598.5; ENST00000490668.5; ENST00000466213.5; ENST00000460428.5; ENST00000470472.5
External Link RMBase: m6A_site_21340
mod ID: M6ASITE015585 Click to Show/Hide the Full List
mod site chr1:35179486-35179487:- [5]
Sequence ATTTCATAATTTTGTTACAAACCAAAATTATTTTTAATGAG
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000470472.5; ENST00000468598.5; ENST00000485365.1; ENST00000490668.5; ENST00000460428.5
External Link RMBase: m6A_site_21341
mod ID: M6ASITE015589 Click to Show/Hide the Full List
mod site chr1:35179568-35179569:- [5]
Sequence GCAGTGGGTTTTTTTAAAAAACTCAAAAAGCTGGGAATTAA
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000468598.5; ENST00000470472.5; ENST00000490668.5; ENST00000460428.5; ENST00000485365.1
External Link RMBase: m6A_site_21342
mod ID: M6ASITE015590 Click to Show/Hide the Full List
mod site chr1:35179654-35179655:- [5]
Sequence TTTGCACTTTAGAATGAGAAACTTGTGACGTTAGTGTGTTC
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000490668.5; ENST00000470472.5; ENST00000460428.5; ENST00000485365.1; ENST00000468598.5
External Link RMBase: m6A_site_21343
mod ID: M6ASITE015591 Click to Show/Hide the Full List
mod site chr1:35179781-35179782:- [7]
Sequence CTATTTCTTACCAGTCAGTAACAATTTTTAGAGAATGTACT
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000468598.5; ENST00000490668.5; ENST00000485365.1; ENST00000470472.5; ENST00000460428.5
External Link RMBase: m6A_site_21344
mod ID: M6ASITE015592 Click to Show/Hide the Full List
mod site chr1:35179905-35179906:- [7]
Sequence GACATGAGTATCACTAAATTACATAGAACCCTGATGGGGTT
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000490668.5; ENST00000468598.5; ENST00000460428.5; ENST00000470472.5; ENST00000485365.1
External Link RMBase: m6A_site_21345
mod ID: M6ASITE015593 Click to Show/Hide the Full List
mod site chr1:35179964-35179965:- [7]
Sequence AGTTTAGCCTCTGCATATCAACAATATAATGCAGATCAAGT
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000460428.5; ENST00000490668.5; ENST00000485365.1; ENST00000468598.5; ENST00000470472.5
External Link RMBase: m6A_site_21346
mod ID: M6ASITE015594 Click to Show/Hide the Full List
mod site chr1:35180018-35180019:- [5]
Sequence ATTCAAGCAAACAACTTTGGACTCTACTGATAGATGAAAGA
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000460428.5; ENST00000485365.1; ENST00000468598.5; ENST00000470472.5; ENST00000490668.5
External Link RMBase: m6A_site_21347
mod ID: M6ASITE015595 Click to Show/Hide the Full List
mod site chr1:35180028-35180029:- [5]
Sequence CATGTAGTCCATTCAAGCAAACAACTTTGGACTCTACTGAT
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000460428.5; ENST00000485365.1; ENST00000470472.5; ENST00000468598.5; ENST00000490668.5
External Link RMBase: m6A_site_21348
mod ID: M6ASITE015596 Click to Show/Hide the Full List
mod site chr1:35180065-35180066:- [5]
Sequence AAGCAATTCACAAGGTGGGGACAGACTTGTACTTTAACATG
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000470472.5; ENST00000468598.5; ENST00000490668.5; ENST00000460428.5; ENST00000485365.1
External Link RMBase: m6A_site_21349
mod ID: M6ASITE015597 Click to Show/Hide the Full List
mod site chr1:35180125-35180126:- [5]
Sequence GAAAACTTCATGACTATGAGACTTTTCTTCTGTGTATCAAG
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000485365.1; ENST00000490668.5; ENST00000460428.5; ENST00000470472.5; ENST00000468598.5
External Link RMBase: m6A_site_21350
mod ID: M6ASITE015598 Click to Show/Hide the Full List
mod site chr1:35180141-35180142:- [5]
Sequence TTGCATAAATGCTGATGAAAACTTCATGACTATGAGACTTT
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000468598.5; ENST00000460428.5; ENST00000490668.5; ENST00000470472.5; ENST00000485365.1
External Link RMBase: m6A_site_21351
mod ID: M6ASITE015599 Click to Show/Hide the Full List
mod site chr1:35180211-35180212:- [5]
Sequence TTAGCTAGCATGCATGAGAGACAGTTTTCATGTATAATGTT
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000470472.5; ENST00000490668.5; ENST00000460428.5; ENST00000485365.1; ENST00000468598.5
External Link RMBase: m6A_site_21352
mod ID: M6ASITE015600 Click to Show/Hide the Full List
mod site chr1:35180238-35180239:- [5]
Sequence TTCAACTTCTTGGTCTCTGAACTGGTTTTAGCTAGCATGCA
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000468598.5; ENST00000485365.1; ENST00000460428.5; ENST00000490668.5; ENST00000470472.5
External Link RMBase: m6A_site_21353
mod ID: M6ASITE015601 Click to Show/Hide the Full List
mod site chr1:35180265-35180266:- [5]
Sequence TGCATCAACTGTTGTTCCAGACCTCACTTCAACTTCTTGGT
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000490668.5; ENST00000468598.5; ENST00000485365.1; ENST00000470472.5; ENST00000460428.5
External Link RMBase: m6A_site_21354
mod ID: M6ASITE015602 Click to Show/Hide the Full List
mod site chr1:35180289-35180290:- [5]
Sequence CACAACTTTTGTTGCTTAGGACTTTGCATCAACTGTTGTTC
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000460428.5; ENST00000468598.5; ENST00000490668.5; ENST00000485365.1; ENST00000470472.5
External Link RMBase: m6A_site_21355
mod ID: M6ASITE015603 Click to Show/Hide the Full List
mod site chr1:35180326-35180327:- [5]
Sequence TCCAAAATGTTTACAAGAAAACCTAAGTCTTCAAAAGCACA
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000468598.5; ENST00000490668.5; ENST00000470472.5; ENST00000485365.1; ENST00000460428.5
External Link RMBase: m6A_site_21356
mod ID: M6ASITE015604 Click to Show/Hide the Full List
mod site chr1:35180334-35180335:- [7]
Sequence TGTTATAGTCCAAAATGTTTACAAGAAAACCTAAGTCTTCA
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000470472.5; ENST00000490668.5; ENST00000460428.5; ENST00000468598.5; ENST00000485365.1
External Link RMBase: m6A_site_21357
mod ID: M6ASITE015605 Click to Show/Hide the Full List
mod site chr1:35180433-35180434:- [7]
Sequence GAATCATTCCCAATCATAAGACATCGTCGTTTCTGTAGGAT
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000460428.5; ENST00000468598.5; ENST00000490668.5; ENST00000470472.5; ENST00000485365.1
External Link RMBase: m6A_site_21358
mod ID: M6ASITE015614 Click to Show/Hide the Full List
mod site chr1:35180535-35180536:- [5]
Sequence TGAATAGTTCAAGTTATGGGACTTGTCTAAATGTGTCTATA
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000460428.5; ENST00000470472.5; ENST00000468598.5; ENST00000485365.1; ENST00000490668.5
External Link RMBase: m6A_site_21359
mod ID: M6ASITE015625 Click to Show/Hide the Full List
mod site chr1:35180596-35180597:- [5]
Sequence AAAACATGGGCTTCATGAAAACACCATTGTTACTAACTTGG
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000470472.5; ENST00000468598.5; ENST00000460428.5; ENST00000485365.1; ENST00000490668.5
External Link RMBase: m6A_site_21360
mod ID: M6ASITE015636 Click to Show/Hide the Full List
mod site chr1:35180613-35180614:- [5]
Sequence GCGATTTAAAATTTTTAAAAACATGGGCTTCATGAAAACAC
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000485365.1; ENST00000468598.5; ENST00000490668.5; ENST00000470472.5; ENST00000460428.5
External Link RMBase: m6A_site_21361
mod ID: M6ASITE015647 Click to Show/Hide the Full List
mod site chr1:35181188-35181189:- [5]
Sequence AAATGGCAATGGACATTAGGACCCGGATGTAGTATTCCTGC
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000470472.5; ENST00000490668.5; ENST00000460428.5; ENST00000485365.1
External Link RMBase: m6A_site_21362
mod ID: M6ASITE015658 Click to Show/Hide the Full List
mod site chr1:35181196-35181197:- [5]
Sequence AGTACCGCAAATGGCAATGGACATTAGGACCCGGATGTAGT
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000490668.5; ENST00000470472.5; ENST00000460428.5; ENST00000485365.1
External Link RMBase: m6A_site_21363
mod ID: M6ASITE015669 Click to Show/Hide the Full List
mod site chr1:35181302-35181303:- [5]
Sequence ATGTTTTCTGGTGTTCTTGGACTGCAATTATGCACTATTAA
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000485365.1; ENST00000490668.5; ENST00000460428.5; ENST00000470472.5
External Link RMBase: m6A_site_21364
mod ID: M6ASITE015680 Click to Show/Hide the Full List
mod site chr1:35181441-35181442:- [5]
Sequence GTATTGTACCACTAATATAAACAGCTAAAAAATGGGGAAAT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000460428.5; ENST00000485365.1; ENST00000470472.5
External Link RMBase: m6A_site_21365
mod ID: M6ASITE015691 Click to Show/Hide the Full List
mod site chr1:35181482-35181483:- [5]
Sequence ACTCATAAGAAGTACTACAAACCCCACCACTCTTTATAGAT
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000460428.5; ENST00000485365.1; ENST00000470472.5
External Link RMBase: m6A_site_21366
mod ID: M6ASITE015695 Click to Show/Hide the Full List
mod site chr1:35181502-35181503:- [5]
Sequence CTCTTTGCTTAGAACATTAAACTCATAAGAAGTACTACAAA
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000485365.1; ENST00000460428.5; ENST00000470472.5
External Link RMBase: m6A_site_21367
mod ID: M6ASITE015696 Click to Show/Hide the Full List
mod site chr1:35181509-35181510:- [5]
Sequence CATAATCCTCTTTGCTTAGAACATTAAACTCATAAGAAGTA
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000460428.5; ENST00000485365.1; ENST00000470472.5
External Link RMBase: m6A_site_21368
mod ID: M6ASITE015697 Click to Show/Hide the Full List
mod site chr1:35181531-35181532:- [5]
Sequence CATTGGCTCATGTTAGTGAAACCATAATCCTCTTTGCTTAG
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000470472.5; ENST00000485365.1; ENST00000460428.5
External Link RMBase: m6A_site_21369
mod ID: M6ASITE015698 Click to Show/Hide the Full List
mod site chr1:35181589-35181590:- [5]
Sequence AAAAACTGCATATTGTTAAGACCCCAGTGTATTTAATAGGT
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000470472.5; ENST00000485365.1; ENST00000460428.5
External Link RMBase: m6A_site_21370
mod ID: M6ASITE015699 Click to Show/Hide the Full List
mod site chr1:35183283-35183284:- [9]
Sequence GGAGGTTGCAGTGAGCTGAGACTGCCACTGCACTCCAGCCT
Motif Score 3.319380952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000357214.6; rmsk_81255; ENST00000470472.5; ENST00000460428.5
External Link RMBase: m6A_site_21371
mod ID: M6ASITE015700 Click to Show/Hide the Full List
mod site chr1:35183313-35183314:- [10]
Sequence GAGCCAGGAGAATTGCTTGAACCTGGAGATGGAGGTTGCAG
Motif Score 2.930744048
Cell/Tissue List CD34
Seq Type List m6A-seq
Transcript ID List ENST00000460428.5; ENST00000470472.5; ENST00000357214.6; rmsk_81255
External Link RMBase: m6A_site_21372
mod ID: M6ASITE015701 Click to Show/Hide the Full List
mod site chr1:35183633-35183634:- [9]
Sequence CTATAAATGGCTTGTATTGAACTTTTACATTTGAATTAAAG
Motif Score 3.373380952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000357214.6; ENST00000460428.5; ENST00000470472.5
External Link RMBase: m6A_site_21373
mod ID: M6ASITE015702 Click to Show/Hide the Full List
mod site chr1:35183667-35183668:- [7]
Sequence TTCTTGTTTTTAAAAGACCAACAAATCTCAAGCCCTATAAA
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000357214.6; ENST00000460428.5; ENST00000470472.5
External Link RMBase: m6A_site_21374
mod ID: M6ASITE015703 Click to Show/Hide the Full List
mod site chr1:35183671-35183672:- [9]
Sequence CCATTTCTTGTTTTTAAAAGACCAACAAATCTCAAGCCCTA
Motif Score 2.876744048
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000357214.6; ENST00000460428.5; ENST00000470472.5
External Link RMBase: m6A_site_21375
mod ID: M6ASITE015704 Click to Show/Hide the Full List
mod site chr1:35183737-35183738:- [9]
Sequence GGCCCTATGATCTATCCTTTACTTGAAAGCTTTTGAAAAGT
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000357214.6; ENST00000470472.5; ENST00000460428.5
External Link RMBase: m6A_site_21376
mod ID: M6ASITE015705 Click to Show/Hide the Full List
mod site chr1:35183804-35183805:- [5]
Sequence GATTGTGGAATGGGTGTAAGACAATTGGTAGGGGGTGAAAG
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T
Seq Type List m6A-seq; DART-seq; MAZTER-seq
Transcript ID List ENST00000470472.5; ENST00000460428.5; ENST00000357214.6
External Link RMBase: m6A_site_21377
mod ID: M6ASITE015706 Click to Show/Hide the Full List
mod site chr1:35183852-35183853:- [5]
Sequence GGTTATGTAAGCAAAGCTGAACTGTAAATCTTCAGGAATAT
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000460428.5; ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21378
mod ID: M6ASITE015707 Click to Show/Hide the Full List
mod site chr1:35183978-35183979:- [7]
Sequence GAGGCTAAGTATTGCTTTCTACAAATAATTGCCCCCTTTGT
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000357214.6; ENST00000470472.5; ENST00000460428.5
External Link RMBase: m6A_site_21379
mod ID: M6ASITE015708 Click to Show/Hide the Full List
mod site chr1:35184063-35184064:- [7]
Sequence CATATTAGGCTACGTATTCCACATTGAAAGCATGAGAGTGT
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000460428.5; ENST00000470472.5; ENST00000357214.6
External Link RMBase: m6A_site_21380
mod ID: M6ASITE015709 Click to Show/Hide the Full List
mod site chr1:35184106-35184107:- [9]
Sequence AGTTATAATATTGATCTTCAACTTTGCCATTCATGCTTCTA
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000460428.5; ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21381
mod ID: M6ASITE015710 Click to Show/Hide the Full List
mod site chr1:35184170-35184171:- [9]
Sequence CCACTGAATTTCCAAAGTGTACCAATTTTTTTTTTTTTACT
Motif Score 2.8355
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6; ENST00000460428.5
External Link RMBase: m6A_site_21382
mod ID: M6ASITE015711 Click to Show/Hide the Full List
mod site chr1:35184198-35184199:- [9]
Sequence CCTCAAGTTTATGGCAGTGTACCTTGTGCCACTGAATTTCC
Motif Score 2.8355
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000460428.5; ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21383
mod ID: M6ASITE015712 Click to Show/Hide the Full List
mod site chr1:35184231-35184232:- [9]
Sequence TTCTTTATTTTTTCTTTTTTACTGTATAATGTCCCTCAAGT
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000357214.6; ENST00000470472.5; ENST00000460428.5
External Link RMBase: m6A_site_21384
mod ID: M6ASITE015713 Click to Show/Hide the Full List
mod site chr1:35184278-35184279:- [5]
Sequence TATGTAATGCAGTGTTTGGAACAGGAGAATTTTTTTTTCCT
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000460428.5; ENST00000470472.5; ENST00000357214.6
External Link RMBase: m6A_site_21385
mod ID: M6ASITE015714 Click to Show/Hide the Full List
mod site chr1:35184467-35184468:- [5]
Sequence TACGAAGGCCCAAACAAAAAACCCCGATTTTAGATGTGATA
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; LCLs; MT4; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000460428.5; ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21386
mod ID: M6ASITE015715 Click to Show/Hide the Full List
mod site chr1:35184474-35184475:- [5]
Sequence AGAAGAGTACGAAGGCCCAAACAAAAAACCCCGATTTTAGA
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T; HepG2; LCLs; MT4; Huh7
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000357214.6; ENST00000460428.5; ENST00000470472.5
External Link RMBase: m6A_site_21387
mod ID: M6ASITE015716 Click to Show/Hide the Full List
mod site chr1:35184520-35184521:- [5]
Sequence CTAGAGGAATGGGGCCTGGAACTCCAGCAGGATATGGTAGA
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; HepG2; LCLs; MT4; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000357214.6; ENST00000470472.5; ENST00000460428.5
External Link RMBase: m6A_site_21388
mod ID: M6ASITE015717 Click to Show/Hide the Full List
mod site chr1:35184548-35184549:- [5]
Sequence GGTGCGGGGCCTGTGGGTGGACAGGGTCCTAGAGGAATGGG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HEK293T; brain; kidney; hESC-HEK293T; HepG2; U2OS; LCLs; MT4; Huh7; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq; miCLIP
Transcript ID List ENST00000460428.5; ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21389
mod ID: M6ASITE015718 Click to Show/Hide the Full List
mod site chr1:35184615-35184616:- [11]
Sequence ACATCAACTACTTATAATGAACTGTTAATTACTGTTCCAAT
Motif Score 3.373380952
Cell/Tissue List CD8T
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000470472.5; ENST00000460428.5; ENST00000357214.6
External Link RMBase: m6A_site_21390
mod ID: M6ASITE015719 Click to Show/Hide the Full List
mod site chr1:35187004-35187005:- [7]
Sequence TGGTTCCATGATGGGAAGTGACATGGTAATGTATCCTGTGG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000357214.6; ENST00000470472.5; ENST00000460428.5
External Link RMBase: m6A_site_21391
mod ID: M6ASITE015720 Click to Show/Hide the Full List
mod site chr1:35187210-35187211:- [5]
Sequence GGGTGGCGGAGGAGCAATGAACATGGGAGGTAAGTGTGAAA
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; hESC-HEK293T; U2OS; hNPCs; fibroblasts; A549; LCLs; H1299; Huh7; Jurkat; endometrial
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000460428.5; ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21392
mod ID: M6ASITE015721 Click to Show/Hide the Full List
mod site chr1:35187240-35187241:- [5]
Sequence TTTCTTGCAGCGGGAAAGAGACATGCGAATGGGTGGCGGAG
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; hESC-HEK293T; BGC823; U2OS; hNPCs; hESCs; fibroblasts; A549; LCLs; H1299; Huh7; Jurkat; endometrial
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000470472.5; ENST00000460428.5; ENST00000357214.6
External Link RMBase: m6A_site_21393
mod ID: M6ASITE015722 Click to Show/Hide the Full List
mod site chr1:35187997-35187998:- [12]
Sequence GCGCCAAAGAGAGGAAAGTTACAGCCGAATGGGCTACATGG
Motif Score 2.07285119
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000460428.5; ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21394
mod ID: M6ASITE015723 Click to Show/Hide the Full List
mod site chr1:35188026-35188027:- [5]
Sequence CGTCAACGTGAGATGGAAGAACAAATGAGGCGCCAAAGAGA
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; hESC-HEK293T; BGC823; U2OS; hNPCs; hESCs; fibroblasts; A549; LCLs; H1299; Huh7; Jurkat; endometrial; AML
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; miCLIP
Transcript ID List ENST00000470472.5; ENST00000357214.6; ENST00000460428.5
External Link RMBase: m6A_site_21395
mod ID: M6ASITE015724 Click to Show/Hide the Full List
mod site chr1:35189041-35189042:- [7]
Sequence AAGACGCATGGAAGAACTTCACAATCAAGAAATGCAGAAAC
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6
External Link RMBase: m6A_site_21396
mod ID: M6ASITE015725 Click to Show/Hide the Full List
mod site chr1:35189046-35189047:- [5]
Sequence GAATTAAGACGCATGGAAGAACTTCACAATCAAGAAATGCA
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; BGC823; U2OS; hNPCs; hESCs; fibroblasts; A549; LCLs; H1299; Huh7; Jurkat; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21397
mod ID: M6ASITE015726 Click to Show/Hide the Full List
mod site chr1:35189073-35189074:- [12]
Sequence TGTTCAGATCTGATGAGACGACAGGAAGAATTAAGACGCAT
Motif Score 2.865571429
Cell/Tissue List kidney; liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6
External Link RMBase: m6A_site_21398
mod ID: M6ASITE015727 Click to Show/Hide the Full List
mod site chr1:35189210-35189211:- [5]
Sequence ATGGAAGATGCCTATCATGAACATCAGGCAAATCTTTTGCG
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HEK293T; hESC-HEK293T; BGC823; HepG2; hNPCs; fibroblasts; LCLs; H1299; Huh7; Jurkat; endometrial
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6
External Link RMBase: m6A_site_21399
mod ID: M6ASITE015728 Click to Show/Hide the Full List
mod site chr1:35189247-35189248:- [5]
Sequence AAACATGAAAGATGCAAAAGACAAATTGGAAAGTGAAATGG
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; BGC823; HepG2; hNPCs; fibroblasts; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6
External Link RMBase: m6A_site_21400
mod ID: M6ASITE015729 Click to Show/Hide the Full List
mod site chr1:35189265-35189266:- [5]
Sequence AAGGGAACAAGTTGAAAAAAACATGAAAGATGCAAAAGACA
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; BGC823; HepG2; hNPCs; fibroblasts; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6
External Link RMBase: m6A_site_21401
mod ID: M6ASITE015730 Click to Show/Hide the Full List
mod site chr1:35189279-35189280:- [5]
Sequence ATGGAAAAACAGCAAAGGGAACAAGTTGAAAAAAACATGAA
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; BGC823; HepG2; hNPCs; fibroblasts; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21402
mod ID: M6ASITE015731 Click to Show/Hide the Full List
mod site chr1:35189291-35189292:- [5]
Sequence TCTTTGGATGAAATGGAAAAACAGCAAAGGGAACAAGTTGA
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; liver; BGC823; HepG2; hNPCs; fibroblasts; endometrial
Seq Type List m6A-seq; m6A-REF-seq
Transcript ID List ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21403
mod ID: M6ASITE015732 Click to Show/Hide the Full List
mod site chr1:35189371-35189372:- [5]
Sequence GTATTGTTAGGGAGAGAGAAACCCCTCCTCGTTTTGCCCAG
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6
External Link RMBase: m6A_site_21404
mod ID: M6ASITE015733 Click to Show/Hide the Full List
mod site chr1:35190526-35190527:- [5]
Sequence GAAGATGGTCTTCCTGAAAAACTTGCCCAGAAGAATCCAAT
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21405
mod ID: M6ASITE015734 Click to Show/Hide the Full List
mod site chr1:35190559-35190560:- [5]
Sequence GTCATTGTGGAACCACTTGAACAACTAGATGATGAAGATGG
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000357214.6; ENST00000470472.5
External Link RMBase: m6A_site_21406
mod ID: M6ASITE015735 Click to Show/Hide the Full List
mod site chr1:35190568-35190569:- [5]
Sequence CCTCGTCCAGTCATTGTGGAACCACTTGAACAACTAGATGA
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6
External Link RMBase: m6A_site_21407
mod ID: M6ASITE015736 Click to Show/Hide the Full List
mod site chr1:35190694-35190695:- [7]
Sequence AAGGTGTTTTCTTACTGACGACGTAAGTTGTCTTGTTTATT
Motif Score 2.839505952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21408
mod ID: M6ASITE015737 Click to Show/Hide the Full List
mod site chr1:35190857-35190858:- [5]
Sequence TCACCTTATGTTTCCAATGAACTGTTGGAAGAAGCCTTTAG
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; hESCs; fibroblasts; A549; LCLs; CD8T; H1299; MSC; TIME; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21409
mod ID: M6ASITE015744 Click to Show/Hide the Full List
mod site chr1:35190910-35190911:- [7]
Sequence AGCTTCGAGTTCGCTTTGCCACACATGCTGCTGCCCTTTCT
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21410
mod ID: M6ASITE015749 Click to Show/Hide the Full List
mod site chr1:35190932-35190933:- [5]
Sequence GATACACCCATGAGAGGTAGACAGCTTCGAGTTCGCTTTGC
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; HepG2; U2OS; hESCs; fibroblasts; A549; LCLs; H1299; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21411
mod ID: M6ASITE015756 Click to Show/Hide the Full List
mod site chr1:35190949-35190950:- [7]
Sequence CCAAAGCCGAACTGGATGATACACCCATGAGAGGTAGACAG
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21412
mod ID: M6ASITE015762 Click to Show/Hide the Full List
mod site chr1:35190959-35190960:- [5]
Sequence GCTGAAATTGCCAAAGCCGAACTGGATGATACACCCATGAG
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; hESCs; fibroblasts; A549; H1299; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21413
mod ID: M6ASITE015768 Click to Show/Hide the Full List
mod site chr1:35191371-35191372:- [7]
Sequence ACCAGGAGAAGTTTTTATCAACAAAGGCAAAGGATTCGGAT
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21414
mod ID: M6ASITE015779 Click to Show/Hide the Full List
mod site chr1:35191391-35191392:- [5]
Sequence CTATTTGCTAAATATGGAGAACCAGGAGAAGTTTTTATCAA
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; U2OS; A549; H1299; MM6; Huh7; Jurkat
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21415
mod ID: M6ASITE015790 Click to Show/Hide the Full List
mod site chr1:35191412-35191413:- [5]
Sequence ACGGAGGATGAATTCAAAAGACTATTTGCTAAATATGGAGA
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HEK293T; U2OS; A549; MT4; H1299; MM6; Huh7; Jurkat
Seq Type List m6A-seq; MeRIP-seq; DART-seq; m6A-CLIP/IP
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21416
mod ID: M6ASITE015801 Click to Show/Hide the Full List
mod site chr1:35191479-35191480:- [7]
Sequence GAGGCCTGGAGAGAAAACTTACACACAGCGATGTCGGTTGT
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21417
mod ID: M6ASITE015812 Click to Show/Hide the Full List
mod site chr1:35191483-35191484:- [5]
Sequence TGAGGAGGCCTGGAGAGAAAACTTACACACAGCGATGTCGG
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HEK293T; U2OS; A549; MT4; H1299; MM6; Huh7; Jurkat
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21418
mod ID: M6ASITE015823 Click to Show/Hide the Full List
mod site chr1:35192228-35192229:- [5]
Sequence CAGCGAGGAGAAGATCTCGGACTCGGAGGTGAGTGTCTATG
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; U2OS; MT4; A549; H1299; MM6; Huh7; Jurkat; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21419
mod ID: M6ASITE015834 Click to Show/Hide the Full List
mod site chr1:35192520-35192521:- [7]
Sequence CAAGCAGCGGGGTCCCTACCACACCTCCTCAGGCCGGAGGC
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21420
mod ID: M6ASITE015845 Click to Show/Hide the Full List
mod site chr1:35192707-35192708:- [5]
Sequence AAGCCCGTCGTTGCTCAGGGACCCGGCCCCGCTCCCGGAGT
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; U2OS; H1A; H1B; hESCs; LCLs; MT4; A549; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; iSLK; MSC; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21421
mod ID: M6ASITE015856 Click to Show/Hide the Full List
mod site chr1:35192735-35192736:- [5]
Sequence GCCGCCGCCACCGCCGCAGGACTCTTCCAAGCCCGTCGTTG
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; U2OS; H1A; H1B; hESCs; LCLs; MT4; A549; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; iSLK; MSC; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21422
mod ID: M6ASITE015867 Click to Show/Hide the Full List
mod site chr1:35192854-35192855:- [7]
Sequence CCGATCCCGCCACCGCCTCCACACCAACAGCAGCAACAGCC
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21423
mod ID: M6ASITE015878 Click to Show/Hide the Full List
mod site chr1:35193050-35193051:- [5]
Sequence CGACCGCCCCTTGACCACAGACATGTCTCGGGATCGGTTCC
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; hESC-HEK293T; peripheral-blood; endometrial
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000357214.6
External Link RMBase: m6A_site_21424
N7-methylguanosine (m7G)
In total 1 m6A sequence/site(s) in this target gene
mod ID: m7GSITE000019 Click to Show/Hide the Full List
mod site chr1:35188066-35188067:- [13]
Sequence AGAGGAGGAACGACGTAGAAGAGAGGAAGAGATGATGATTC
Cell/Tissue List A549; HeLa; HepG2
Seq Type List BoRed-seq&m7G-RIP-seq; m7G-seq
Transcript ID List ENST00000357214.6; ENST00000470472.5
External Link RMBase: m7G_site_24
2'-O-Methylation (2'-O-Me)
In total 2 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000072 Click to Show/Hide the Full List
mod site chr1:35188038-35188039:- [14]
Sequence GAGATGATGATTCGTCAACGTGAGATGGAAGAACAAATGAG
Cell/Tissue List HEK293; HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000470472.5; ENST00000357214.6; ENST00000460428.5
External Link RMBase: Nm_site_142
mod ID: 2OMSITE000073 Click to Show/Hide the Full List
mod site chr1:35190950-35190951:- [14]
Sequence GCCAAAGCCGAACTGGATGATACACCCATGAGAGGTAGACA
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000357214.6
External Link RMBase: Nm_site_143
Pseudouridine (Pseudo)
In total 1 m6A sequence/site(s) in this target gene
mod ID: PSESITE000027 Click to Show/Hide the Full List
mod site chr1:35184093-35184094:- [15]
Sequence ATCTTCAACTTTGCCATTCATGCTTCTATGCATATTAGGCT
Transcript ID List ENST00000460428.5; ENST00000470472.5; ENST00000357214.6
External Link RMBase: Pseudo_site_125