m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00240)
Target Name Eukaryotic translation initiation factor 3 subunit C (EIF3C)
Synonyms
eIF3c; Eukaryotic translation initiation factor 3 subunit 8; eIF3 p110; EIF3S8
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Gene Name EIF3C
Chromosomal Location 16p11.2
Family eIF-3 subunit C family
Function
Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression.
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Gene ID 8663
Uniprot ID
EIF3C_HUMAN
HGNC ID
HGNC:3279
KEGG ID
hsa:8663
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
EIF3C can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
YTH domain-containing family protein 1 (YTHDF1) [READER]
 Regulator Info 
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [2]
Response Summary YTHDF1 augments the translation of Eukaryotic translation initiation factor 3 subunit C (EIF3C) in an m6A-dependent manner by binding to m6A-modified EIF3C mRNA and concomitantly promotes the overall translational output, thereby facilitating tumorigenesis and metastasis of ovarian cancer.
Target Regulation Up regulation
Responsed Disease Ovarian cancer ICD-11: 2C73
 Disease Info 
Pathway Response mRNA surveillance pathway hsa03015
Cell Process Tumorigenesis and metastasis
In-vitro Model A2780 Ovarian endometrioid adenocarcinoma Homo sapiens CVCL_0134
HEK293T Normal Homo sapiens CVCL_0063
SK-OV-3 Ovarian serous cystadenocarcinoma Homo sapiens CVCL_0532
In-vivo Model 5 × 106 cells in PBS were injected subcutaneously into one side of the posterior flanks of Balb/C nude mice at 6-8 weeks old.
Ovarian cancer [ICD-11: 2C73]
 Disease Info 
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [2]
Response Summary YTHDF1 augments the translation of Eukaryotic translation initiation factor 3 subunit C (EIF3C) in an m6A-dependent manner by binding to m6A-modified EIF3C mRNA and concomitantly promotes the overall translational output, thereby facilitating tumorigenesis and metastasis of ovarian cancer.
Responsed Disease Ovarian cancer [ICD-11: 2C73]
Target Regulator YTH domain-containing family protein 1 (YTHDF1) READER
 Regulator Info 
Target Regulation Up regulation
Pathway Response mRNA surveillance pathway hsa03015
Cell Process Tumorigenesis and metastasis
In-vitro Model A2780 Ovarian endometrioid adenocarcinoma Homo sapiens CVCL_0134
HEK293T Normal Homo sapiens CVCL_0063
SK-OV-3 Ovarian serous cystadenocarcinoma Homo sapiens CVCL_0532
In-vivo Model 5 × 106 cells in PBS were injected subcutaneously into one side of the posterior flanks of Balb/C nude mice at 6-8 weeks old.
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: Wilms tumor 1-associating protein (WTAP)
 Regulator Info 
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05265
 Crosstalk Info 
Epigenetic Regulator Circ_PDE5A
Regulated Target Pre-mRNA-splicing regulator WTAP (WTAP)
Crosstalk relationship ncRNA → m6A
Disease Prostate cancer
 Disease Info 
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00240)
Eukaryotic translation initiation factor 3 subunit C (EIF3C)
5-methylcytidine (m5C)
In total 3 m6A sequence/site(s) in this target gene
mod ID: M5CSITE000634 Click to Show/Hide the Full List
mod site chr16:28724708-28724709:+ [3]
Sequence TCAATGAGCTGATGGATATCCTGTTTGCAAATCCCAACATT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000566866.5; ENST00000331666.10; ENST00000395587.5; ENST00000564243.5; ENST00000565932.5; ENST00000566501.5
External Link RMBase: m5C_site_15667
mod ID: M5CSITE000635 Click to Show/Hide the Full List
mod site chr16:28724977-28724978:+ [3]
Sequence CGAATGGATGAAGAATTTACCAAAATAATGCAAAATACTGA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000565932.5; ENST00000395587.5; ENST00000564243.5; ENST00000566501.5; ENST00000331666.10; ENST00000566866.5
External Link RMBase: m5C_site_15668
mod ID: M5CSITE000636 Click to Show/Hide the Full List
mod site chr16:28727049-28727050:+ [3]
Sequence GACCAGGCAGAAAATGAGGGCGAGGACTCGGCTGTGTTGAT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000565932.5; ENST00000566866.5; ENST00000395587.5; ENST00000564243.5; ENST00000564839.1; ENST00000566519.1; ENST00000566501.5; ENST00000331666.10
External Link RMBase: m5C_site_15669
N6-methyladenosine (m6A)
In total 74 m6A sequence/site(s) in this target gene
mod ID: M6ASITE026467 Click to Show/Hide the Full List
mod site chr16:28688797-28688798:+ [4]
Sequence TCTCTCCAGTGAGGTCTGAGACCCAGCCTTAACGAGGCTAC
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List rmsk_4507221; ENST00000566501.5
External Link RMBase: m6A_site_314661
mod ID: M6ASITE026468 Click to Show/Hide the Full List
mod site chr16:28711555-28711556:+ [4]
Sequence CTCGTGCTTCGTGGTGGGAGACCCAGGTCGAGGTCCGGGTG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000564243.5; ENST00000569690.5; ENST00000566501.5; ENST00000395587.5; ENST00000566866.5; ENST00000331666.10
External Link RMBase: m6A_site_314665
mod ID: M6ASITE026469 Click to Show/Hide the Full List
mod site chr16:28711714-28711715:+ [4]
Sequence GTTTTTCACCACCGGTTCGGACAGCGAGTCCGAGTCGTCCT
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000564243.5; ENST00000569690.5; ENST00000566866.5; ENST00000331666.10; ENST00000395587.5; ENST00000566501.5
External Link RMBase: m6A_site_314666
mod ID: M6ASITE026470 Click to Show/Hide the Full List
mod site chr16:28711760-28711761:+ [4]
Sequence GGGGAGGAGCTCGTCACCAAACCTGTCGGAGGCAACTATGG
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000569690.5; ENST00000564243.5; ENST00000395587.5; ENST00000566866.5; ENST00000566501.5; ENST00000331666.10
External Link RMBase: m6A_site_314667
mod ID: M6ASITE026471 Click to Show/Hide the Full List
mod site chr16:28711784-28711785:+ [4]
Sequence GTCGGAGGCAACTATGGCAAACAGTGAGTTGCGGGGGCTGT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000395587.5; ENST00000566866.5; ENST00000564243.5; ENST00000331666.10; ENST00000569690.5; ENST00000566501.5
External Link RMBase: m6A_site_314668
mod ID: M6ASITE026472 Click to Show/Hide the Full List
mod site chr16:28713759-28713760:+ [4]
Sequence AGTTGTCCGCAGTGCCAAGGACAAGAGGTAAAGCCATGGCG
Motif Score 3.643047619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000395587.5; ENST00000331666.10; ENST00000566501.5; ENST00000568426.1; ENST00000563139.5; ENST00000566866.5; ENST00000569690.5; ENST00000564243.5
External Link RMBase: m6A_site_314669
mod ID: M6ASITE026473 Click to Show/Hide the Full List
mod site chr16:28713936-28713937:+ [4]
Sequence AGCTGACCAACCTTATCCGGACCATCCGTAATGCCATGAAG
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000569690.5; ENST00000331666.10; ENST00000568426.1; ENST00000563139.5; ENST00000566501.5; ENST00000395587.5; ENST00000566866.5; ENST00000564243.5
External Link RMBase: m6A_site_314670
mod ID: M6ASITE026474 Click to Show/Hide the Full List
mod site chr16:28714033-28714034:+ [4]
Sequence GAAGGCCAAAAGCATTGTGGACAAAGAAGGTGTCCCCCGGT
Motif Score 3.643047619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000569690.5; ENST00000568426.1; ENST00000566866.5; ENST00000563139.5; ENST00000395587.5; ENST00000566501.5; ENST00000331666.10; ENST00000564243.5
External Link RMBase: m6A_site_314671
mod ID: M6ASITE026475 Click to Show/Hide the Full List
mod site chr16:28714084-28714085:+ [4]
Sequence CATCCTGGCTGACCTAGAGGACTATCTTAATGAGGTGTGAT
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000395587.5; ENST00000566866.5; ENST00000564243.5; ENST00000569690.5; ENST00000566501.5; ENST00000563139.5; ENST00000331666.10; ENST00000568426.1
External Link RMBase: m6A_site_314672
mod ID: M6ASITE026476 Click to Show/Hide the Full List
mod site chr16:28714354-28714355:+ [4]
Sequence GGAAGGGAAGAAGAAGATGAACAAGAACAATGCCAAGGCTC
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T; Huh7
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000568426.1; rmsk_4507314; ENST00000566501.5; ENST00000569690.5; ENST00000331666.10; ENST00000395587.5; ENST00000566866.5; ENST00000564243.5; ENST00000563139.5
External Link RMBase: m6A_site_314673
mod ID: M6ASITE026477 Click to Show/Hide the Full List
mod site chr16:28714360-28714361:+ [4]
Sequence GAAGAAGAAGATGAACAAGAACAATGCCAAGGCTCTGAGCA
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T; Huh7
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000566866.5; ENST00000568426.1; rmsk_4507314; ENST00000569690.5; ENST00000566501.5; ENST00000331666.10; ENST00000564243.5; ENST00000395587.5; ENST00000563139.5
External Link RMBase: m6A_site_314674
mod ID: M6ASITE026478 Click to Show/Hide the Full List
mod site chr16:28714405-28714406:+ [5]
Sequence GCGTCAGAAGATCCGAAAATACAACCGTGATTTCGAGTCCC
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000395587.5; ENST00000563139.5; ENST00000566501.5; ENST00000566866.5; ENST00000564243.5; ENST00000568426.1; ENST00000331666.10; ENST00000569690.5
External Link RMBase: m6A_site_314675
mod ID: M6ASITE026479 Click to Show/Hide the Full List
mod site chr16:28714438-28714439:+ [5]
Sequence CGAGTCCCATATCACAAGCTACAAGCAGGTGGGGAGGCTAG
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000568426.1; ENST00000564243.5; ENST00000566866.5; ENST00000331666.10; ENST00000566501.5; ENST00000395587.5
External Link RMBase: m6A_site_314676
mod ID: M6ASITE026480 Click to Show/Hide the Full List
mod site chr16:28715319-28715320:+ [4]
Sequence CTCTAAGGATGAAGATGAGGACTCAGAAGATTCCGAAGATG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000564243.5; ENST00000566501.5; ENST00000331666.10; ENST00000395587.5; ENST00000566866.5
External Link RMBase: m6A_site_314677
mod ID: M6ASITE026481 Click to Show/Hide the Full List
mod site chr16:28715346-28715347:+ [4]
Sequence AGATTCCGAAGATGATGAAGACTGGGACACAGGTTCCACAT
Motif Score 3.319380952
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000566501.5; ENST00000566866.5; ENST00000395587.5; ENST00000331666.10; ENST00000564243.5
External Link RMBase: m6A_site_314678
mod ID: M6ASITE026482 Click to Show/Hide the Full List
mod site chr16:28715352-28715353:+ [4]
Sequence CGAAGATGATGAAGACTGGGACACAGGTTCCACATCTTCCG
Motif Score 3.643047619
Cell/Tissue List HeLa; hESC-HEK293T; Huh7
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000566866.5; ENST00000331666.10; ENST00000395587.5; ENST00000564243.5; ENST00000566501.5
External Link RMBase: m6A_site_314679
mod ID: M6ASITE026483 Click to Show/Hide the Full List
mod site chr16:28715401-28715402:+ [4]
Sequence TCAGAGGAGGAAGAAGGGAAACAAACCGCGCTGGCCTCAAG
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T; Huh7
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000395587.5; ENST00000331666.10; ENST00000566501.5; ENST00000566866.5; ENST00000564243.5
External Link RMBase: m6A_site_314680
mod ID: M6ASITE026484 Click to Show/Hide the Full List
mod site chr16:28720524-28720525:+ [4]
Sequence TTTATATAGGAGAAAGAGGAACAAGGAGAGAGGGCAAAACC
Motif Score 2.951386905
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000564243.5; ENST00000565099.1; ENST00000395587.5; ENST00000566501.5; ENST00000566866.5; ENST00000331666.10
External Link RMBase: m6A_site_314681
mod ID: M6ASITE026485 Click to Show/Hide the Full List
mod site chr16:28720542-28720543:+ [4]
Sequence GAACAAGGAGAGAGGGCAAAACCACAGAACAGTGGATTCTG
Motif Score 2.185083333
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395587.5; ENST00000566866.5; ENST00000331666.10; ENST00000566501.5; ENST00000564243.5; ENST00000565099.1
External Link RMBase: m6A_site_314682
mod ID: M6ASITE026486 Click to Show/Hide the Full List
mod site chr16:28720550-28720551:+ [4]
Sequence AGAGAGGGCAAAACCACAGAACAGTGGATTCTGTTTGCCCG
Motif Score 2.951386905
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395587.5; ENST00000331666.10; ENST00000565099.1; ENST00000564243.5; ENST00000566501.5; ENST00000566866.5
External Link RMBase: m6A_site_314683
mod ID: M6ASITE026487 Click to Show/Hide the Full List
mod site chr16:28720584-28720585:+ [4]
Sequence TTGCCCGTTTTTCTGTGTAAACTCTGATATTAACTCTCCTT
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000564243.5; ENST00000566866.5; ENST00000331666.10; ENST00000395587.5; ENST00000566501.5; ENST00000565099.1
External Link RMBase: m6A_site_314684
mod ID: M6ASITE026488 Click to Show/Hide the Full List
mod site chr16:28720641-28720642:+ [4]
Sequence GTTGGTGGATGCTCTAGAAAACACGATAGGCCCTCTGCCAG
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000331666.10; ENST00000565099.1; ENST00000566866.5; ENST00000564243.5; ENST00000395587.5; ENST00000566501.5
External Link RMBase: m6A_site_314685
mod ID: M6ASITE026489 Click to Show/Hide the Full List
mod site chr16:28721278-28721279:+ [4]
Sequence TGTTTTTGTTTTTTAAGTGAACCCCAGGATCTCTAGTGAGA
Motif Score 2.930744048
Cell/Tissue List HeLa; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000566501.5; ENST00000566866.5; ENST00000331666.10; ENST00000565932.5; ENST00000395587.5; ENST00000564243.5; ENST00000565099.1
External Link RMBase: m6A_site_314686
mod ID: M6ASITE026490 Click to Show/Hide the Full List
mod site chr16:28721298-28721299:+ [4]
Sequence ACCCCAGGATCTCTAGTGAGACTGAATGTCCGAGTTAGGAT
Motif Score 3.319380952
Cell/Tissue List HeLa; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000565099.1; ENST00000566501.5; ENST00000395587.5; ENST00000331666.10; ENST00000566866.5; ENST00000565932.5; ENST00000564243.5
External Link RMBase: m6A_site_314687
mod ID: M6ASITE026491 Click to Show/Hide the Full List
mod site chr16:28723173-28723174:+ [6]
Sequence CTGTCGGCAGGGCACCCACCACAGATGAGGACAAGAAGGCA
Motif Score 2.053113095
Cell/Tissue List HEK293
Seq Type List m6A-REF-seq
Transcript ID List ENST00000566501.5; ENST00000395587.5; ENST00000564243.5; ENST00000566866.5; ENST00000331666.10; ENST00000565099.1; ENST00000565932.5
External Link RMBase: m6A_site_314688
mod ID: M6ASITE026492 Click to Show/Hide the Full List
mod site chr16:28723183-28723184:+ [4]
Sequence GGCACCCACCACAGATGAGGACAAGAAGGCAGCCGAGAAGA
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; H1A; H1B; hNPCs; hESCs; fibroblasts; A549; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000565932.5; ENST00000564243.5; ENST00000331666.10; ENST00000565099.1; ENST00000566501.5; ENST00000395587.5; ENST00000566866.5
External Link RMBase: m6A_site_314689
mod ID: M6ASITE026493 Click to Show/Hide the Full List
mod site chr16:28723213-28723214:+ [4]
Sequence AGCCGAGAAGAAACGGGAGGACAAAGCTAAGAAGAAGCACG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; H1A; H1B; hNPCs; hESCs; fibroblasts; A549; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000565099.1; ENST00000566501.5; ENST00000331666.10; ENST00000395587.5; ENST00000566866.5; ENST00000564243.5; ENST00000565932.5
External Link RMBase: m6A_site_314690
mod ID: M6ASITE026494 Click to Show/Hide the Full List
mod site chr16:28723270-28723271:+ [4]
Sequence CCTGGATGAGGAGGAGGAGGACAATGAAGGCGGGGAGTGGG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; hESC-HEK293T; H1A; H1B; hNPCs; hESCs; fibroblasts; A549; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000566501.5; ENST00000564243.5; ENST00000331666.10; ENST00000566866.5; ENST00000565932.5; ENST00000395587.5
External Link RMBase: m6A_site_314691
mod ID: M6ASITE026495 Click to Show/Hide the Full List
mod site chr16:28723474-28723475:+ [4]
Sequence CAAAAATGTTTGCCAAGGGAACTGAGATCACCCATGCTGTT
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; H1A; H1B; hNPCs; hESCs; fibroblasts; A549; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000564243.5; ENST00000565932.5; ENST00000566866.5; ENST00000395587.5; ENST00000566501.5; ENST00000331666.10
External Link RMBase: m6A_site_314692
mod ID: M6ASITE026496 Click to Show/Hide the Full List
mod site chr16:28723506-28723507:+ [4]
Sequence CATGCTGTTGTTATCAAGAAACTGAATGAGATCCTACAGGC
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T; fibroblasts; H1299; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000566501.5; ENST00000331666.10; ENST00000565932.5; ENST00000395587.5; ENST00000566866.5; ENST00000564243.5
External Link RMBase: m6A_site_314693
mod ID: M6ASITE026497 Click to Show/Hide the Full List
mod site chr16:28723521-28723522:+ [6]
Sequence AAGAAACTGAATGAGATCCTACAGGCACGAGGCAAGAAGGG
Motif Score 2.078666667
Cell/Tissue List HEK293
Seq Type List m6A-REF-seq
Transcript ID List ENST00000566866.5; ENST00000331666.10; ENST00000564243.5; ENST00000566501.5; ENST00000395587.5; ENST00000565932.5
External Link RMBase: m6A_site_314694
mod ID: M6ASITE026498 Click to Show/Hide the Full List
mod site chr16:28723543-28723544:+ [4]
Sequence AGGCACGAGGCAAGAAGGGAACTGATCGGTAAGATTCGTGG
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; fibroblasts; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000564243.5; ENST00000565932.5; ENST00000331666.10; ENST00000395587.5; ENST00000566866.5; ENST00000566501.5
External Link RMBase: m6A_site_314695
mod ID: M6ASITE026499 Click to Show/Hide the Full List
mod site chr16:28724371-28724372:+ [4]
Sequence GGTTCAGATTGCAGCGGAAAACAACCTGGGAGAGGGCGTCA
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000565932.5; ENST00000395587.5; ENST00000566501.5; ENST00000566866.5; ENST00000564243.5; ENST00000331666.10
External Link RMBase: m6A_site_314696
mod ID: M6ASITE026500 Click to Show/Hide the Full List
mod site chr16:28724434-28724435:+ [5]
Sequence CATCGCCTCTCTCTATGACTACAACCCCAACCTGGCAACCT
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000566866.5; ENST00000566501.5; ENST00000331666.10; ENST00000395587.5; ENST00000565932.5; ENST00000564243.5
External Link RMBase: m6A_site_314697
mod ID: M6ASITE026501 Click to Show/Hide the Full List
mod site chr16:28724455-28724456:+ [6]
Sequence CAACCCCAACCTGGCAACCTACATGAAGGTGAGAGCAGTGA
Motif Score 2.078666667
Cell/Tissue List brain; kidney; hESC-HEK293T
Seq Type List m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000395587.5; ENST00000566501.5; ENST00000566866.5; ENST00000564243.5; ENST00000331666.10; ENST00000565932.5
External Link RMBase: m6A_site_314698
mod ID: M6ASITE026502 Click to Show/Hide the Full List
mod site chr16:28724682-28724683:+ [4]
Sequence GATGTGGGGGAAGTGCCTGGACTGCATCAATGAGCTGATGG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000564243.5; ENST00000565932.5; ENST00000566501.5; ENST00000395587.5; ENST00000566866.5; ENST00000331666.10
External Link RMBase: m6A_site_314699
mod ID: M6ASITE026503 Click to Show/Hide the Full List
mod site chr16:28724724-28724725:+ [5]
Sequence TATCCTGTTTGCAAATCCCAACATTTTTGTTGGAGAGAATA
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000331666.10; ENST00000565932.5; ENST00000566501.5; ENST00000564243.5; ENST00000395587.5; ENST00000566866.5
External Link RMBase: m6A_site_314700
mod ID: M6ASITE026504 Click to Show/Hide the Full List
mod site chr16:28724763-28724764:+ [4]
Sequence TATTCTGGAAGAGAGTGAGAACCTGCACAACGCTGACCAGG
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000395587.5; ENST00000565932.5; ENST00000564243.5; ENST00000566866.5; ENST00000331666.10; ENST00000566501.5
External Link RMBase: m6A_site_314701
mod ID: M6ASITE026505 Click to Show/Hide the Full List
mod site chr16:28724769-28724770:+ [5]
Sequence GGAAGAGAGTGAGAACCTGCACAACGCTGACCAGGTAAAGG
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000395587.5; ENST00000331666.10; ENST00000566866.5; ENST00000564243.5; ENST00000565932.5; ENST00000566501.5
External Link RMBase: m6A_site_314702
mod ID: M6ASITE026506 Click to Show/Hide the Full List
mod site chr16:28726264-28726265:+ [4]
Sequence AGGGGAAGAATCAGCTGAAGACAGCGCCTGACAGGAGGAGC
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000564839.1; ENST00000566866.5; ENST00000566501.5; ENST00000395587.5; ENST00000565932.5; ENST00000564243.5; ENST00000331666.10
External Link RMBase: m6A_site_314703
mod ID: M6ASITE026507 Click to Show/Hide the Full List
mod site chr16:28726727-28726728:+ [5]
Sequence CTACCTGCTGCGCATCCTGCACACCTACTACAAGTTTGATT
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000565932.5; ENST00000566501.5; ENST00000395587.5; ENST00000566866.5; ENST00000564243.5; ENST00000564839.1; ENST00000331666.10; ENST00000566519.1
External Link RMBase: m6A_site_314704
mod ID: M6ASITE026508 Click to Show/Hide the Full List
mod site chr16:28727030-28727031:+ [4]
Sequence TCCTCCCCAGTCTGAGCAAGACCAGGCAGAAAATGAGGGCG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000565932.5; ENST00000331666.10; ENST00000564839.1; ENST00000564243.5; ENST00000395587.5; ENST00000566501.5; ENST00000566866.5; ENST00000566519.1
External Link RMBase: m6A_site_314705
mod ID: M6ASITE026509 Click to Show/Hide the Full List
mod site chr16:28727054-28727055:+ [4]
Sequence GGCAGAAAATGAGGGCGAGGACTCGGCTGTGTTGATGGAGA
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000395587.5; ENST00000565932.5; ENST00000564243.5; ENST00000331666.10; ENST00000566501.5; ENST00000564839.1; ENST00000566866.5; ENST00000566519.1
External Link RMBase: m6A_site_314706
mod ID: M6ASITE026510 Click to Show/Hide the Full List
mod site chr16:28727076-28727077:+ [4]
Sequence TCGGCTGTGTTGATGGAGAGACTGTGCAAGTACATCTACGC
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000566519.1; ENST00000565932.5; ENST00000564243.5; ENST00000331666.10; ENST00000566501.5; ENST00000566866.5; ENST00000395587.5
External Link RMBase: m6A_site_314707
mod ID: M6ASITE026511 Click to Show/Hide the Full List
mod site chr16:28727087-28727088:+ [5]
Sequence GATGGAGAGACTGTGCAAGTACATCTACGCCAAGGACCGCA
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000564243.5; ENST00000566501.5; ENST00000395587.5; ENST00000565932.5; ENST00000566519.1; ENST00000566866.5; ENST00000331666.10
External Link RMBase: m6A_site_314708
mod ID: M6ASITE026512 Click to Show/Hide the Full List
mod site chr16:28727102-28727103:+ [4]
Sequence CAAGTACATCTACGCCAAGGACCGCACAGACCGGATCCGCA
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000566866.5; ENST00000566501.5; ENST00000566519.1; ENST00000564243.5; ENST00000395587.5; ENST00000565932.5; ENST00000331666.10
External Link RMBase: m6A_site_314709
mod ID: M6ASITE026513 Click to Show/Hide the Full List
mod site chr16:28727111-28727112:+ [4]
Sequence CTACGCCAAGGACCGCACAGACCGGATCCGCACATGTGCCA
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000331666.10; ENST00000395587.5; ENST00000566501.5; ENST00000565932.5; ENST00000566866.5; ENST00000566519.1; ENST00000564243.5
External Link RMBase: m6A_site_314710
mod ID: M6ASITE026514 Click to Show/Hide the Full List
mod site chr16:28727122-28727123:+ [6]
Sequence ACCGCACAGACCGGATCCGCACATGTGCCATCCTCTGCCAC
Motif Score 2.830589286
Cell/Tissue List kidney; liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000564243.5; ENST00000566501.5; ENST00000566866.5; ENST00000395587.5; ENST00000566519.1; ENST00000331666.10; ENST00000565932.5
External Link RMBase: m6A_site_314711
mod ID: M6ASITE026515 Click to Show/Hide the Full List
mod site chr16:28727141-28727142:+ [5]
Sequence CACATGTGCCATCCTCTGCCACATCTACCACCATGCTCTGC
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000566519.1; ENST00000566866.5; ENST00000395587.5; ENST00000331666.10; ENST00000566501.5; ENST00000565932.5; ENST00000564243.5
External Link RMBase: m6A_site_314712
mod ID: M6ASITE026516 Click to Show/Hide the Full List
mod site chr16:28727213-28727214:+ [4]
Sequence GCTCATGAGCCACTTGCAGGACAACATTCAGCATGCAGACC
Motif Score 3.643047619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000566866.5; ENST00000564243.5; ENST00000566519.1; ENST00000395587.5; ENST00000566501.5; ENST00000565932.5; ENST00000331666.10
External Link RMBase: m6A_site_314713
mod ID: M6ASITE026517 Click to Show/Hide the Full List
mod site chr16:28727231-28727232:+ [4]
Sequence GGACAACATTCAGCATGCAGACCCGCCAGTGCAGGTAGGAT
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000566866.5; ENST00000564243.5; ENST00000331666.10; ENST00000565932.5; ENST00000566519.1; ENST00000395587.5; ENST00000566501.5
External Link RMBase: m6A_site_314714
mod ID: M6ASITE026518 Click to Show/Hide the Full List
mod site chr16:28731835-28731836:+ [5]
Sequence CCTTTGCCCCCAGATCCTTTACAACCGCACCATGGTGCAGC
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000564243.5; ENST00000331666.10; ENST00000566866.5; ENST00000565932.5; ENST00000566501.5; ENST00000395587.5
External Link RMBase: m6A_site_314715
mod ID: M6ASITE026519 Click to Show/Hide the Full List
mod site chr16:28731896-28731897:+ [5]
Sequence CAAGGCCTGACCAAGGACGCACACAACGCCCTGCTGGACAT
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000564243.5; ENST00000331666.10; ENST00000566501.5; ENST00000395587.5; ENST00000565932.5; ENST00000566866.5
External Link RMBase: m6A_site_314716
mod ID: M6ASITE026520 Click to Show/Hide the Full List
mod site chr16:28731913-28731914:+ [4]
Sequence CGCACACAACGCCCTGCTGGACATCCAGTCGAGTGGCCGAG
Motif Score 3.643047619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000564243.5; ENST00000566501.5; ENST00000331666.10; ENST00000566866.5; ENST00000395587.5; ENST00000565932.5
External Link RMBase: m6A_site_314717
mod ID: M6ASITE026521 Click to Show/Hide the Full List
mod site chr16:28732036-28732037:+ [5]
Sequence TCAGGTCCCCTTCCACCTGCACATCAACCTGGAGCTGCTGG
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000395587.5; ENST00000564243.5; ENST00000566866.5; ENST00000566501.5; ENST00000565932.5; ENST00000331666.10
External Link RMBase: m6A_site_314718
mod ID: M6ASITE026522 Click to Show/Hide the Full List
mod site chr16:28732099-28732100:+ [5]
Sequence CATGCTCCTGGAGATCCCCTACATGGCCGCCCATGAGAGCG
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000566866.5; ENST00000565932.5; ENST00000395587.5; ENST00000564243.5; ENST00000566501.5; ENST00000331666.10
External Link RMBase: m6A_site_314719
mod ID: M6ASITE026523 Click to Show/Hide the Full List
mod site chr16:28732178-28732179:+ [6]
Sequence CAGCTGCGCGTGGGCGAGCGACAGCCCCTGCTGGGTGAGTG
Motif Score 2.865571429
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000564243.5; ENST00000331666.10; ENST00000395587.5; ENST00000566866.5; ENST00000565932.5; ENST00000569005.5; ENST00000566501.5
External Link RMBase: m6A_site_314720
mod ID: M6ASITE026524 Click to Show/Hide the Full List
mod site chr16:28734541-28734542:+ [4]
Sequence CCCCCTGAGTCCATGCGGGAACATGTGGTCGCTGCCTCCAA
Motif Score 2.951386905
Cell/Tissue List HeLa; kidney; hESC-HEK293T
Seq Type List m6A-seq; m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000565932.5; ENST00000564243.5; ENST00000569005.5; ENST00000395587.5; ENST00000566866.5; ENST00000331666.10; ENST00000566501.5
External Link RMBase: m6A_site_314721
mod ID: M6ASITE026525 Click to Show/Hide the Full List
mod site chr16:28734587-28734588:+ [4]
Sequence TGAAGATGGGTGACTGGAAGACCTGTCACAGTTTTATCATC
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000566501.5; ENST00000565932.5; ENST00000331666.10; ENST00000395587.5; ENST00000566866.5; ENST00000564243.5; ENST00000569005.5
External Link RMBase: m6A_site_314722
mod ID: M6ASITE026526 Click to Show/Hide the Full List
mod site chr16:28734636-28734637:+ [4]
Sequence GATGAATGGGAAAGTGTGGGACCTTTTCCCCGAGGCTGACA
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000569005.5; ENST00000331666.10; ENST00000566501.5; ENST00000395587.5; ENST00000565932.5; ENST00000566866.5; ENST00000564243.5
External Link RMBase: m6A_site_314723
mod ID: M6ASITE026527 Click to Show/Hide the Full List
mod site chr16:28734654-28734655:+ [5]
Sequence GGACCTTTTCCCCGAGGCTGACAAAGTCCGCACCATGCTGG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000395587.5; ENST00000331666.10; ENST00000566866.5; ENST00000566501.5; ENST00000564243.5; ENST00000565932.5; ENST00000569005.5
External Link RMBase: m6A_site_314724
mod ID: M6ASITE026528 Click to Show/Hide the Full List
mod site chr16:28734687-28734688:+ [4]
Sequence CATGCTGGTTAGGTGAGCAGACAGAGAGGCCGTGATGGGTC
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000565932.5; ENST00000569005.5; ENST00000395587.5; ENST00000566501.5; ENST00000331666.10; ENST00000564243.5; ENST00000566866.5
External Link RMBase: m6A_site_314725
mod ID: M6ASITE026529 Click to Show/Hide the Full List
mod site chr16:28734948-28734949:+ [5]
Sequence CAGCATGGAGACGCTGTCAGACATGTTTGAGCTGGATCTGC
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000564243.5; ENST00000569005.5; ENST00000331666.10; ENST00000566501.5; ENST00000565932.5; ENST00000566866.5; ENST00000395587.5; ENST00000566086.1
External Link RMBase: m6A_site_314726
mod ID: M6ASITE026530 Click to Show/Hide the Full List
mod site chr16:28735182-28735183:+ [4]
Sequence CGCCTGTCAGGCCTCCCTGGACCAGCCAACACAGACAGTGG
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000566866.5; ENST00000395587.5; ENST00000564243.5; ENST00000566086.1; ENST00000331666.10; ENST00000565932.5; ENST00000566501.5; ENST00000569005.5
External Link RMBase: m6A_site_314727
mod ID: M6ASITE026531 Click to Show/Hide the Full List
mod site chr16:28735190-28735191:+ [5]
Sequence AGGCCTCCCTGGACCAGCCAACACAGACAGTGGTGATGCAC
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000566086.1; ENST00000565932.5; ENST00000564243.5; ENST00000566501.5; ENST00000331666.10; ENST00000569005.5; ENST00000395587.5; ENST00000566866.5
External Link RMBase: m6A_site_314728
mod ID: M6ASITE026532 Click to Show/Hide the Full List
mod site chr16:28735196-28735197:+ [4]
Sequence CCCTGGACCAGCCAACACAGACAGTGGTGATGCACCGCACT
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000395587.5; ENST00000566501.5; ENST00000331666.10; ENST00000565932.5; ENST00000569005.5; ENST00000564243.5; ENST00000566866.5; ENST00000566086.1
External Link RMBase: m6A_site_314729
mod ID: M6ASITE026533 Click to Show/Hide the Full List
mod site chr16:28735236-28735237:+ [4]
Sequence TGAGCCCACTGCCCAGCAGAACCTGGCTCTGCAGCTGGCCG
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000565932.5; ENST00000564243.5; ENST00000566501.5; ENST00000569005.5; ENST00000566086.1; ENST00000566866.5; ENST00000331666.10; ENST00000395587.5
External Link RMBase: m6A_site_314730
mod ID: M6ASITE026534 Click to Show/Hide the Full List
mod site chr16:28735281-28735282:+ [4]
Sequence GCTGGGCAGCCTGGTGGAGAACAACGAACGGGTGTTTGACC
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000566501.5; ENST00000565932.5; ENST00000564243.5; ENST00000331666.10; ENST00000566866.5; ENST00000569005.5; ENST00000566086.1; ENST00000395587.5
External Link RMBase: m6A_site_314731
mod ID: M6ASITE026535 Click to Show/Hide the Full List
mod site chr16:28735302-28735303:+ [6]
Sequence CAACGAACGGGTGTTTGACCACAAGCAGGGCACCTACGGGG
Motif Score 2.053113095
Cell/Tissue List liver; hESC-HEK293T
Seq Type List m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000565932.5; ENST00000566501.5; ENST00000564243.5; ENST00000566086.1; ENST00000395587.5; ENST00000331666.10; ENST00000566866.5; ENST00000569005.5
External Link RMBase: m6A_site_314732
mod ID: M6ASITE026536 Click to Show/Hide the Full List
mod site chr16:28735463-28735464:+ [5]
Sequence CTACCGCAAAAACGAGGGCTACATGCGCCGCGGTGGCTACC
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000566501.5; ENST00000395587.5; ENST00000564243.5; ENST00000566086.1; ENST00000331666.10; ENST00000565932.5; ENST00000566866.5
External Link RMBase: m6A_site_314733
mod ID: M6ASITE026537 Click to Show/Hide the Full List
mod site chr16:28735561-28735562:+ [4]
Sequence ATCCAACCTTGAAGTCCTAAACCACACCTCAGTCACTAAAG
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000395587.5; ENST00000566086.1; ENST00000566501.5; ENST00000566866.5; ENST00000331666.10; ENST00000564243.5; ENST00000565932.5
External Link RMBase: m6A_site_314734
mod ID: M6ASITE026538 Click to Show/Hide the Full List
mod site chr16:28735564-28735565:+ [5]
Sequence CAACCTTGAAGTCCTAAACCACACCTCAGTCACTAAAGGTC
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000566866.5; ENST00000564243.5; ENST00000565932.5; ENST00000331666.10; ENST00000566086.1; ENST00000395587.5; ENST00000566501.5
External Link RMBase: m6A_site_314735
mod ID: M6ASITE026539 Click to Show/Hide the Full List
mod site chr16:28735619-28735620:+ [5]
Sequence CTGGTTGATTGCTTGTTGCCACAAAGGTGTGTTGAGCCCAT
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000395587.5; ENST00000331666.10
External Link RMBase: m6A_site_314736
mod ID: M6ASITE026540 Click to Show/Hide the Full List
mod site chr16:28735672-28735673:+ [5]
Sequence TATATTTCTGAGCTGCTACCACATGACAGACACAAGGCTCA
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000331666.10; ENST00000395587.5
External Link RMBase: m6A_site_314737
Pseudouridine (Pseudo)
In total 2 m6A sequence/site(s) in this target gene
mod ID: PSESITE000072 Click to Show/Hide the Full List
mod site chr16:28727086-28727087:+ [7]
Sequence TGATGGAGAGACTGTGCAAGTACATCTACGCCAAGGACCGC
Transcript ID List ENST00000395587.5; ENST00000566501.5; ENST00000566519.1; ENST00000566866.5; ENST00000565932.5; ENST00000564243.5; ENST00000331666.10
External Link RMBase: Pseudo_site_1768
mod ID: PSESITE000073 Click to Show/Hide the Full List
mod site chr16:28727092-28727093:+ [8]
Sequence AGAGACTGTGCAAGTACATCTACGCCAAGGACCGCACAGAC
Transcript ID List ENST00000566501.5; ENST00000566519.1; ENST00000331666.10; ENST00000395587.5; ENST00000564243.5; ENST00000565932.5; ENST00000566866.5
External Link RMBase: Pseudo_site_1769