m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00201)
Target Name BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 (BNIP3)
Synonyms
NIP3
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Gene Name BNIP3
Chromosomal Location 10q26.3
Family NIP3 family
Function
Apoptosis-inducing protein that can overcome BCL2 suppression. May play a role in repartitioning calcium between the two major intracellular calcium stores in association with BCL2. Involved in mitochondrial quality control via its interaction with SPATA18/MIEAP: in response to mitochondrial damage, participates in mitochondrial protein catabolic process (also named MALM) leading to the degradation of damaged proteins inside mitochondria. The physical interaction of SPATA18/MIEAP, BNIP3 and BNIP3L/NIX at the mitochondrial outer membrane regulates the opening of a pore in the mitochondrial double membrane in order to mediate the translocation of lysosomal proteins from the cytoplasm to the mitochondrial matrix. Plays an important role in the calprotectin (S100A8/A9)-induced cell death pathway.
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Gene ID 664
Uniprot ID
BNIP3_HUMAN
HGNC ID
HGNC:1084
KEGG ID
hsa:664
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
BNIP3 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Fat mass and obesity-associated protein (FTO) [ERASER]
 Regulator Info 
Representative RNA-seq result indicating the expression of this target gene regulated by FTO
Cell Line 253J cell line Homo sapiens
Treatment: siFTO 253J cells
Control: 253J cells
 GSE150239
Regulation
logFC: 3.13E+00
p-value: 6.97E-04
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary FTO mediated m6A demethylation in the 3'UTR of BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 (BNIP3) mRNA and induced its degradation via an YTHDF2 independent mechanism. FTO serves as a novel potential therapeutic target for breast cancer.
Target Regulation Up regulation
Responsed Disease Breast cancer ICD-11: 2C60
 Disease Info 
Cell Process Cell proliferation
Cell colony formation
Cell metastasis
In-vitro Model 4 T1 (Mouse breast cancer cells)
MCF-7 Invasive breast carcinoma Homo sapiens CVCL_0031
MDA-MB-231 Breast adenocarcinoma Homo sapiens CVCL_0062
In-vivo Model For the subcutaneous implantation model, 5 4-week-old female Balb/c mice were randomly grouped and injected with 1 × 106 shCtrl, shFTO or shFTO/shBNIP3 KD 4 T1 cells. For tumor metastasis mouse model, 5 4-week-old female Balb/c mice were randomly grouped and injected with 1 × 106 shCtrl, shFTO or shFTO/shBNIP3 KD 4 T1 cells via tail vein. For orthotopic xenograft mouse model, 5 4-week-old female NOD/SCID mice were randomly grouped.
Breast cancer [ICD-11: 2C60]
 Disease Info 
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary FTO mediated m6A demethylation in the 3'UTR of BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 (BNIP3) mRNA and induced its degradation via an YTHDF2 independent mechanism. FTO serves as a novel potential therapeutic target for breast cancer.
Responsed Disease Breast cancer [ICD-11: 2C60]
Target Regulator Fat mass and obesity-associated protein (FTO) ERASER
 Regulator Info 
Target Regulation Up regulation
Cell Process Cell proliferation
Cell colony formation
Cell metastasis
In-vitro Model 4 T1 (Mouse breast cancer cells)
MCF-7 Invasive breast carcinoma Homo sapiens CVCL_0031
MDA-MB-231 Breast adenocarcinoma Homo sapiens CVCL_0062
In-vivo Model For the subcutaneous implantation model, 5 4-week-old female Balb/c mice were randomly grouped and injected with 1 × 106 shCtrl, shFTO or shFTO/shBNIP3 KD 4 T1 cells. For tumor metastasis mouse model, 5 4-week-old female Balb/c mice were randomly grouped and injected with 1 × 106 shCtrl, shFTO or shFTO/shBNIP3 KD 4 T1 cells via tail vein. For orthotopic xenograft mouse model, 5 4-week-old female NOD/SCID mice were randomly grouped.
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00201)
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 (BNIP3)
Adenosine-to-Inosine editing (A-to-I)
In total 2 m6A sequence/site(s) in this target gene
mod ID: A2ISITE004485 Click to Show/Hide the Full List
mod site chr10:131974541-131974542:- [6]
Sequence TAAAAAAAATAGCCAGGAGTAGTGGTGCATGCCTGTAGTTC
Transcript ID List ENST00000631806.1; ENST00000633835.1; ENST00000368636.8; ENST00000540159.3; rmsk_3454009
External Link RMBase: RNA-editing_site_19371
mod ID: A2ISITE004486 Click to Show/Hide the Full List
mod site chr10:131976867-131976868:- [7]
Sequence TATTAGCAGTGTACTCCAAAAGTGCTCCTTGGTTAACCATT
Transcript ID List ENST00000633835.1; ENST00000368636.8; ENST00000631806.1; ENST00000540159.3
External Link RMBase: RNA-editing_site_19372
5-methylcytidine (m5C)
In total 5 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004805 Click to Show/Hide the Full List
mod site chr10:131968541-131968542:-
Sequence ATTGGAAGGCGTCTGACAACCTCCACCAGCACCTTTTGATG
Cell/Tissue List frontalcortex; heart; HEK293T; liver; testis
Seq Type List Bisulfite-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m5C_site_6136
mod ID: M5CSITE004806 Click to Show/Hide the Full List
mod site chr10:131969926-131969927:-
Sequence CAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000633835.1; ENST00000368636.8; ENST00000540159.3
External Link RMBase: m5C_site_6137
mod ID: M5CSITE004807 Click to Show/Hide the Full List
mod site chr10:131973945-131973946:- [8]
Sequence GCCCCTTTTTTTGTCCCCATCAGGCTCCTGGGTAGAACTGC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000540159.3; ENST00000631806.1; ENST00000633835.1; ENST00000368636.8
External Link RMBase: m5C_site_6138
mod ID: M5CSITE004808 Click to Show/Hide the Full List
mod site chr10:131981935-131981936:- [8]
Sequence GAGTTCCTCCGGCCGGGCTGCGGGGCTCCGCTCAGTCCGGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000631806.1; ENST00000368636.8; ENST00000633835.1
External Link RMBase: m5C_site_6139
mod ID: M5CSITE004809 Click to Show/Hide the Full List
mod site chr10:131981938-131981939:- [8]
Sequence TGTGAGTTCCTCCGGCCGGGCTGCGGGGCTCCGCTCAGTCC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000631806.1; ENST00000633835.1; ENST00000368636.8
External Link RMBase: m5C_site_6140
N6-methyladenosine (m6A)
In total 69 m6A sequence/site(s) in this target gene
mod ID: M6ASITE002753 Click to Show/Hide the Full List
mod site chr10:131966463-131966464:- [9]
Sequence GACATTTTATTAAAAATGAAACAAGTTTGATGTGTGTGCGT
Motif Score 2.20572619
Cell/Tissue List fibroblasts; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123921
mod ID: M6ASITE002754 Click to Show/Hide the Full List
mod site chr10:131966482-131966483:- [9]
Sequence TCGTTAGATTGTAACATTAGACATTTTATTAAAAATGAAAC
Motif Score 2.897386905
Cell/Tissue List fibroblasts; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123922
mod ID: M6ASITE002755 Click to Show/Hide the Full List
mod site chr10:131966532-131966533:- [10]
Sequence GTGCTTTAGACAGATGGGAGACCAAGAATCAAGTTTTCTGG
Motif Score 2.876744048
Cell/Tissue List HeLa; H1A; fibroblasts; GM12878; Jurkat; MSC; TIME; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123923
mod ID: M6ASITE002756 Click to Show/Hide the Full List
mod site chr10:131966543-131966544:- [10]
Sequence CTGGGACTGGAGTGCTTTAGACAGATGGGAGACCAAGAATC
Motif Score 2.897386905
Cell/Tissue List HeLa; H1A; fibroblasts; GM12878; Jurkat; MSC; TIME; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123924
mod ID: M6ASITE002757 Click to Show/Hide the Full List
mod site chr10:131966558-131966559:- [10]
Sequence TCAGAAAAAACAACTCTGGGACTGGAGTGCTTTAGACAGAT
Motif Score 4.065041667
Cell/Tissue List HeLa; H1A; fibroblasts; GM12878; Jurkat; MSC; TIME; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123925
mod ID: M6ASITE002758 Click to Show/Hide the Full List
mod site chr10:131966569-131966570:- [10]
Sequence AAGACCCTGTTTCAGAAAAAACAACTCTGGGACTGGAGTGC
Motif Score 2.20572619
Cell/Tissue List HeLa; H1A; fibroblasts; GM12878; Jurkat; MSC; TIME; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List rmsk_3454003; ENST00000368636.8
External Link RMBase: m6A_site_123926
mod ID: M6ASITE002759 Click to Show/Hide the Full List
mod site chr10:131966586-131966587:- [10]
Sequence ACGGCCTGAGCAAGAGCAAGACCCTGTTTCAGAAAAAACAA
Motif Score 2.876744048
Cell/Tissue List HeLa; H1A; fibroblasts; GM12878; Jurkat; MSC; TIME; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List rmsk_3454003; ENST00000368636.8
External Link RMBase: m6A_site_123927
mod ID: M6ASITE002760 Click to Show/Hide the Full List
mod site chr10:131966669-131966670:- [10]
Sequence TAGCCCCAGCTACTTGGTAGACTGAGGCAGGAGGATCCCTT
Motif Score 3.319380952
Cell/Tissue List HeLa; fibroblasts; GM12878; Jurkat; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List rmsk_3454003; ENST00000368636.8
External Link RMBase: m6A_site_123928
mod ID: M6ASITE002761 Click to Show/Hide the Full List
mod site chr10:131966743-131966744:- [10]
Sequence GCCTGGGGGAGCATAGCAAGACCCTGTCTCTACACAAAATA
Motif Score 2.876744048
Cell/Tissue List HeLa; U2OS; fibroblasts; GM12878; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; rmsk_3454003
External Link RMBase: m6A_site_123929
mod ID: M6ASITE002762 Click to Show/Hide the Full List
mod site chr10:131966767-131966768:- [10]
Sequence CACAAGTCCAGAAGTTCGAGACCAGCCTGGGGGAGCATAGC
Motif Score 2.876744048
Cell/Tissue List HeLa; U2OS; fibroblasts; GM12878; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; rmsk_3454003
External Link RMBase: m6A_site_123930
mod ID: M6ASITE002763 Click to Show/Hide the Full List
mod site chr10:131966852-131966853:- [10]
Sequence TGGAGGTACTAAGCTCTGGGACTGGGCCAGTGTGATGGCTC
Motif Score 4.065041667
Cell/Tissue List HeLa; fibroblasts; Jurkat; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123931
mod ID: M6ASITE002764 Click to Show/Hide the Full List
mod site chr10:131966881-131966882:- [10]
Sequence TCTCAAAAAAAAAAAAAAAAACAACCAGTTGGAGGTACTAA
Motif Score 2.20572619
Cell/Tissue List HeLa; fibroblasts; endometrial
Seq Type List m6A-seq
Transcript ID List rmsk_3454004; ENST00000368636.8
External Link RMBase: m6A_site_123932
mod ID: M6ASITE002765 Click to Show/Hide the Full List
mod site chr10:131966907-131966908:- [10]
Sequence AGCCTGGGAGGGAGAACGAGACTCCATCTCAAAAAAAAAAA
Motif Score 3.319380952
Cell/Tissue List HeLa; fibroblasts; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000368636.8; rmsk_3454004
External Link RMBase: m6A_site_123933
mod ID: M6ASITE002766 Click to Show/Hide the Full List
mod site chr10:131966976-131966977:- [10]
Sequence GAGGCAGGAGAACCGCTGGAACCCAGAAGGCAGAGGTTGCA
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000368636.8; rmsk_3454004
External Link RMBase: m6A_site_123934
mod ID: M6ASITE002767 Click to Show/Hide the Full List
mod site chr10:131966985-131966986:- [10]
Sequence TGGGAGGCTGAGGCAGGAGAACCGCTGGAACCCAGAAGGCA
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000368636.8; rmsk_3454004
External Link RMBase: m6A_site_123935
mod ID: M6ASITE002768 Click to Show/Hide the Full List
mod site chr10:131967184-131967185:- [9]
Sequence ATGGCTGAACTCTGAGTGAAACCACCTGTATGGCCGGGCAC
Motif Score 2.185083333
Cell/Tissue List fibroblasts
Seq Type List m6A-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123936
mod ID: M6ASITE002769 Click to Show/Hide the Full List
mod site chr10:131967196-131967197:- [9]
Sequence TCACAGATGACAATGGCTGAACTCTGAGTGAAACCACCTGT
Motif Score 3.373380952
Cell/Tissue List fibroblasts
Seq Type List m6A-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123937
mod ID: M6ASITE002770 Click to Show/Hide the Full List
mod site chr10:131967726-131967727:- [10]
Sequence ATCTGTGTCTACTTTAAAAAACTGGAAATGGAAAAAAAAAT
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123938
mod ID: M6ASITE002771 Click to Show/Hide the Full List
mod site chr10:131967848-131967849:- [11]
Sequence GTTTTCTGCTGAAGGCACCTACTCAGTATCTTTTCCTCTTT
Motif Score 2.500660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123939
mod ID: M6ASITE002772 Click to Show/Hide the Full List
mod site chr10:131967935-131967936:- [10]
Sequence CTGTACAGTTCGTACACTAAACTCTTCTTGCTTTTGCATTA
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123940
mod ID: M6ASITE002773 Click to Show/Hide the Full List
mod site chr10:131967942-131967943:- [12]
Sequence AACTCAGCTGTACAGTTCGTACACTAAACTCTTCTTGCTTT
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123941
mod ID: M6ASITE002774 Click to Show/Hide the Full List
mod site chr10:131967961-131967962:- [10]
Sequence AAACCAAGATAGAGCTACAAACTCAGCTGTACAGTTCGTAC
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123942
mod ID: M6ASITE002775 Click to Show/Hide the Full List
mod site chr10:131967979-131967980:- [10]
Sequence ATTGTTCATAATCAACAGAAACCAAGATAGAGCTACAAACT
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123943
mod ID: M6ASITE002776 Click to Show/Hide the Full List
mod site chr10:131967985-131967986:- [13]
Sequence ATGCTAATTGTTCATAATCAACAGAAACCAAGATAGAGCTA
Motif Score 2.173910714
Cell/Tissue List HEK293
Seq Type List m6A-REF-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123944
mod ID: M6ASITE002777 Click to Show/Hide the Full List
mod site chr10:131968008-131968009:- [11]
Sequence CTAAAGAAAGATTATATATAACTATGCTAATTGTTCATAAT
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123945
mod ID: M6ASITE002778 Click to Show/Hide the Full List
mod site chr10:131968029-131968030:- [11]
Sequence TAAATGGATGCAGGTTGTCTACTAAAGAAAGATTATATATA
Motif Score 2.500660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123946
mod ID: M6ASITE002779 Click to Show/Hide the Full List
mod site chr10:131968075-131968076:- [11]
Sequence ATTGTGGCCTTATATATCACACTATTGTAGAAAGTATTATT
Motif Score 2.506922619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123947
mod ID: M6ASITE002780 Click to Show/Hide the Full List
mod site chr10:131968077-131968078:- [12]
Sequence ATATTGTGGCCTTATATATCACACTATTGTAGAAAGTATTA
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123948
mod ID: M6ASITE002781 Click to Show/Hide the Full List
mod site chr10:131968142-131968143:- [12]
Sequence ATATTTCAAAAGAATGAATAACATTGATAATAAAATCGCTA
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123949
mod ID: M6ASITE002782 Click to Show/Hide the Full List
mod site chr10:131968186-131968187:- [11]
Sequence TATTTTAAAAATTATCTGCAACCTTAATTCAGCTGAAGTAC
Motif Score 2.153267857
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000368636.8
External Link RMBase: m6A_site_123950
mod ID: M6ASITE002783 Click to Show/Hide the Full List
mod site chr10:131968340-131968341:- [12]
Sequence AATCATGTTGATCTATAATTACACCTATGGGATCAATAAGC
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123951
mod ID: M6ASITE002784 Click to Show/Hide the Full List
mod site chr10:131968365-131968366:- [11]
Sequence AGTAAAATAAAAGAATAGACACTAAAATCATGTTGATCTAT
Motif Score 2.506922619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123952
mod ID: M6ASITE002785 Click to Show/Hide the Full List
mod site chr10:131968367-131968368:- [11]
Sequence TTAGTAAAATAAAAGAATAGACACTAAAATCATGTTGATCT
Motif Score 2.897386905
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123953
mod ID: M6ASITE002786 Click to Show/Hide the Full List
mod site chr10:131968470-131968471:- [13]
Sequence GGATTACTTCTGAGCTTGCAACATAGCTCACTGAAGAGCTG
Motif Score 2.173910714
Cell/Tissue List liver; hESC-HEK293T
Seq Type List m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123954
mod ID: M6ASITE002787 Click to Show/Hide the Full List
mod site chr10:131968546-131968547:- [12]
Sequence TCTATATTGGAAGGCGTCTGACAACCTCCACCAGCACCTTT
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123955
mod ID: M6ASITE002788 Click to Show/Hide the Full List
mod site chr10:131968738-131968739:- [14]
Sequence ACAAAATACATATTGATAAAACACTAGATAAAAGATCACAG
Motif Score 2.20572619
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000368636.8; ENST00000540159.3
External Link RMBase: m6A_site_123956
mod ID: M6ASITE002789 Click to Show/Hide the Full List
mod site chr10:131968823-131968824:- [10]
Sequence CAGAAGCTTTCTGTGTGGAAACAGCATTCGGTTTGGTGATC
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; LCLs; Huh7; Jurkat; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123957
mod ID: M6ASITE002790 Click to Show/Hide the Full List
mod site chr10:131968849-131968850:- [10]
Sequence TCCCCCAGCACTGAGTTGGAACAAAGCAGAAGCTTTCTGTG
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; LCLs; Huh7; Jurkat; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123958
mod ID: M6ASITE002791 Click to Show/Hide the Full List
mod site chr10:131968902-131968903:- [10]
Sequence GGTGAGGCTGGTGGTGATGAACTAGCAACACCATCTTGCCC
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; LCLs; Huh7; Jurkat; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123959
mod ID: M6ASITE002792 Click to Show/Hide the Full List
mod site chr10:131968964-131968965:- [10]
Sequence TCTCCCACTACCAAACTTAAACCACATGAGGGCAGGGGCTT
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; LCLs; Huh7; Jurkat; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123960
mod ID: M6ASITE002793 Click to Show/Hide the Full List
mod site chr10:131968970-131968971:- [10]
Sequence GACATCTCTCCCACTACCAAACTTAAACCACATGAGGGCAG
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T; LCLs; Huh7; Jurkat; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123961
mod ID: M6ASITE002794 Click to Show/Hide the Full List
mod site chr10:131968989-131968990:- [10]
Sequence TCCTGCATCTTTAGTTTGGGACATCTCTCCCACTACCAAAC
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; LCLs; Huh7; Jurkat; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; ENST00000540159.3
External Link RMBase: m6A_site_123962
mod ID: M6ASITE002795 Click to Show/Hide the Full List
mod site chr10:131969091-131969092:- [10]
Sequence GATTCTGCCCTTTCCTGGAGACCCATCCTCCTCCCTCCGGG
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; LCLs; MT4; Huh7; Jurkat; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123963
mod ID: M6ASITE002796 Click to Show/Hide the Full List
mod site chr10:131969209-131969210:- [10]
Sequence CCCCTCAGCTGCTTTTCAGAACCACACGATAAAATCTGCCC
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; MT4; Huh7; Jurkat; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; ENST00000540159.3
External Link RMBase: m6A_site_123964
mod ID: M6ASITE002797 Click to Show/Hide the Full List
mod site chr10:131969380-131969381:- [15]
Sequence TTTCCAGAACTGTCAAGCAGACTCTGGGGGCAAGGCCTCGG
Motif Score 3.319380952
Cell/Tissue List HEK293T; Jurkat
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000368636.8; rmsk_3454005; ENST00000540159.3
External Link RMBase: m6A_site_123965
mod ID: M6ASITE002798 Click to Show/Hide the Full List
mod site chr10:131969392-131969393:- [15]
Sequence TTTCTGGAGCCTTTTCCAGAACTGTCAAGCAGACTCTGGGG
Motif Score 3.373380952
Cell/Tissue List HEK293T; Jurkat
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8; rmsk_3454005
External Link RMBase: m6A_site_123966
mod ID: M6ASITE002799 Click to Show/Hide the Full List
mod site chr10:131969440-131969441:- [15]
Sequence TTTGGGAGTCAGACCTACAGACTGCATCAGCATCACCAGGC
Motif Score 3.319380952
Cell/Tissue List HEK293T; Jurkat
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000368636.8; ENST00000540159.3
External Link RMBase: m6A_site_123967
mod ID: M6ASITE002800 Click to Show/Hide the Full List
mod site chr10:131969448-131969449:- [10]
Sequence CTGGTGCTTTTGGGAGTCAGACCTACAGACTGCATCAGCAT
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; Jurkat
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; ENST00000540159.3
External Link RMBase: m6A_site_123968
mod ID: M6ASITE002801 Click to Show/Hide the Full List
mod site chr10:131969576-131969577:- [10]
Sequence ACTGAGTTTCCTGGGCCGGGACCTGAGCGCTGCCCGTGTCT
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; A549; H1A; H1B; LCLs; MM6; Jurkat; iSLK; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123969
mod ID: M6ASITE002802 Click to Show/Hide the Full List
mod site chr10:131969680-131969681:- [10]
Sequence GTGTTGGACAGACTGGAAAGACCGGAATGCCACTGGGGGCA
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; LCLs; MM6; Jurkat; GSC-11; HEK293A-TOA; iSLK; TIME; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000540159.3; ENST00000633835.1; ENST00000368636.8
External Link RMBase: m6A_site_123970
mod ID: M6ASITE002803 Click to Show/Hide the Full List
mod site chr10:131969693-131969694:- [10]
Sequence CTGTGGCTGCCGTGTGTTGGACAGACTGGAAAGACCGGAAT
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; LCLs; MM6; Jurkat; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; ENST00000633835.1; ENST00000540159.3
External Link RMBase: m6A_site_123971
mod ID: M6ASITE002804 Click to Show/Hide the Full List
mod site chr10:131969721-131969722:- [10]
Sequence GCTCTAGTCCTGGCGTGCAGACAGTGTTCTGTGGCTGCCGT
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; U2OS; H1A; H1B; MM6; Jurkat; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; ENST00000540159.3; ENST00000633835.1
External Link RMBase: m6A_site_123972
mod ID: M6ASITE002805 Click to Show/Hide the Full List
mod site chr10:131969861-131969862:- [10]
Sequence ACCCTGCAGAAAACACAGAGACCAGGCAGGCGCCGCTGTGG
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293A-TOA
Seq Type List m6A-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8; ENST00000633835.1
External Link RMBase: m6A_site_123973
mod ID: M6ASITE002806 Click to Show/Hide the Full List
mod site chr10:131970200-131970201:- [10]
Sequence TAACTCTCAGCAATGAAGGAACCAATGCAGTCTCCGACTTT
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000540159.3; ENST00000633835.1; ENST00000368636.8
External Link RMBase: m6A_site_123974
mod ID: M6ASITE002807 Click to Show/Hide the Full List
mod site chr10:131970233-131970234:- [10]
Sequence CTGTACTTCCTCCAGACAGGACTGTTGTTCTAGTAACTCTC
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293A-TOA; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000540159.3; ENST00000368636.8; ENST00000633835.1
External Link RMBase: m6A_site_123975
mod ID: M6ASITE002808 Click to Show/Hide the Full List
mod site chr10:131970238-131970239:- [10]
Sequence ACCTGCTGTACTTCCTCCAGACAGGACTGTTGTTCTAGTAA
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293A-TOA; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; ENST00000633835.1; ENST00000540159.3
External Link RMBase: m6A_site_123976
mod ID: M6ASITE002809 Click to Show/Hide the Full List
mod site chr10:131970479-131970480:- [10]
Sequence GTCACTGTTCAGGTCCAGAAACCACCAGCCTGCAGCCCCCA
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; A549; HepG2; H1B; H1A; HEK293A-TOA; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000540159.3; ENST00000633835.1; ENST00000368636.8
External Link RMBase: m6A_site_123977
mod ID: M6ASITE002810 Click to Show/Hide the Full List
mod site chr10:131970510-131970511:- [10]
Sequence AGCTTGGTGCATTTTCACAAACACCCACGTAGTCACTGTTC
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; HEK293T; A549; HepG2; H1B; H1A; HEK293A-TOA; iSLK; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; ENST00000540159.3; ENST00000633835.1
External Link RMBase: m6A_site_123978
mod ID: M6ASITE002811 Click to Show/Hide the Full List
mod site chr10:131970736-131970737:- [12]
Sequence GGCCACCCTCAGCATGAGGAACACGAGCGTCATGAAGAAAG
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T; LCLs; Huh7
Seq Type List MAZTER-seq; m6A-seq; MeRIP-seq
Transcript ID List ENST00000633835.1; ENST00000368636.8; ENST00000540159.3
External Link RMBase: m6A_site_123979
mod ID: M6ASITE002812 Click to Show/Hide the Full List
mod site chr10:131970771-131970772:- [12]
Sequence CTCAGGGAGTTCCTCTTTAAACACCCGAAGCGCACGGCCAC
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T; LCLs; Huh7; endometrial
Seq Type List MAZTER-seq; m6A-seq; MeRIP-seq
Transcript ID List ENST00000540159.3; ENST00000633835.1; ENST00000368636.8
External Link RMBase: m6A_site_123980
mod ID: M6ASITE002813 Click to Show/Hide the Full List
mod site chr10:131970914-131970915:- [10]
Sequence TGAAAGCATCTTGAAGAAAAACTCAGATTGGATATGGGATT
Motif Score 2.627720238
Cell/Tissue List HeLa; hNPCs; fibroblasts; LCLs; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; ENST00000633835.1; ENST00000540159.3
External Link RMBase: m6A_site_123981
mod ID: M6ASITE002814 Click to Show/Hide the Full List
mod site chr10:131973043-131973044:- [10]
Sequence CCATAGCATTGGAGAGAAAAACAGCTCACAGGTAAGCTGGA
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; fibroblasts; LCLs; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; ENST00000540159.3; ENST00000633835.1
External Link RMBase: m6A_site_123988
mod ID: M6ASITE002815 Click to Show/Hide the Full List
mod site chr10:131973071-131973072:- [10]
Sequence ATACCAACAGAGCTTCTGAAACAGATACCCATAGCATTGGA
Motif Score 2.20572619
Cell/Tissue List HeLa; brain; HEK293T; fibroblasts; LCLs; Huh7; endometrial
Seq Type List m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List ENST00000633835.1; ENST00000368636.8; ENST00000540159.3
External Link RMBase: m6A_site_123989
mod ID: M6ASITE002816 Click to Show/Hide the Full List
mod site chr10:131973101-131973102:- [10]
Sequence CAAGCCCACCTCGCTCGCAGACACCACAAGATACCAACAGA
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; fibroblasts; LCLs; MT4; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000633835.1; ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123990
mod ID: M6ASITE002817 Click to Show/Hide the Full List
mod site chr10:131973795-131973796:- [13]
Sequence CTCCAAGAGCTCTCACTGTGACAGGTAGGCGCGCATCAACA
Motif Score 2.859755952
Cell/Tissue List liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000631806.1; ENST00000633835.1; ENST00000540159.3; ENST00000368636.8
External Link RMBase: m6A_site_123992
mod ID: M6ASITE002818 Click to Show/Hide the Full List
mod site chr10:131973864-131973865:- [16]
Sequence GGTTTCTATTTATAATGGAGACATGGAAAAAATACTGCTGG
Motif Score 2.897386905
Cell/Tissue List HepG2; HeLa; A549; hESC-HEK293T; MT4; Jurkat; iSLK; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000368636.8; ENST00000631806.1; ENST00000633835.1; ENST00000540159.3
External Link RMBase: m6A_site_123993
mod ID: M6ASITE002819 Click to Show/Hide the Full List
mod site chr10:131973929-131973930:- [16]
Sequence CCATCAGGCTCCTGGGTAGAACTGCACTTCAGCAATAATGG
Motif Score 3.373380952
Cell/Tissue List HepG2; HeLa; A549; MT4; MM6; Jurkat; GSC-11; HEK293T; iSLK; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000633835.1; ENST00000540159.3; ENST00000368636.8; ENST00000631806.1
External Link RMBase: m6A_site_123994
mod ID: M6ASITE002820 Click to Show/Hide the Full List
mod site chr10:131981836-131981837:- [10]
Sequence CATCCCGCAGCCCGGCGCGGACTCCGATCGCCGCAGTTGCC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; A549; fibroblasts; MM6; Jurkat; GSC-11; HEK293T; iSLK; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000368636.8; ENST00000631806.1; ENST00000633835.1; ENST00000540159.3
External Link RMBase: m6A_site_123995
mod ID: M6ASITE002821 Click to Show/Hide the Full List
mod site chr10:131981857-131981858:- [12]
Sequence CCACCGCCCGCAGCTGAAGCACATCCCGCAGCCCGGCGCGG
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000368636.8; ENST00000540159.3; ENST00000631806.1; ENST00000633835.1
External Link RMBase: m6A_site_123996