General Information of the m6A Target Gene (ID: M6ATAR00177)
Target Name Aldehyde dehydrogenase 1A1 (ALDH1A1)
Synonyms
3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; ALDC; ALDH1; PUMB1
    Click to Show/Hide
Gene Name ALDH1A1
Chromosomal Location 9q21.13
Family aldehyde dehydrogenase family
Function
Cytosolic dehydrogenase that catalyzes the irreversible oxidation of a wide range of aldehydes to their corresponding carboxylic acid. Functions downstream of retinol dehydrogenases and catalyzes the oxidation of retinaldehyde into retinoic acid, the second step in the oxidation of retinol/vitamin A into retinoic acid (By similarity). This pathway is crucial to control the levels of retinol and retinoic acid, two important molecules which excess can be teratogenic and cytotoxic (By similarity). Also oxidizes aldehydes resulting from lipid peroxidation like (E)-4-hydroxynon-2-enal/HNE, malonaldehyde and hexanal that form protein adducts and are highly cytotoxic. By participating for instance to the clearance of (E)-4-hydroxynon-2-enal/HNE in the lens epithelium prevents the formation of HNE-protein adducts and lens opacification. Functions also downstream of fructosamine-3-kinase in the fructosamine degradation pathway by catalyzing the oxidation of 3-deoxyglucosone, the carbohydrate product of fructosamine 3-phosphate decomposition, which is itself a potent glycating agent that may react with lysine and arginine side-chains of proteins. Has also an aminobutyraldehyde dehydrogenase activity and is probably part of an alternative pathway for the biosynthesis of GABA/4-aminobutanoate in midbrain, thereby playing a role in GABAergic synaptic transmission (By similarity).
    Click to Show/Hide
Gene ID 216
Uniprot ID
AL1A1_HUMAN
HGNC ID
HGNC:402
KEGG ID
hsa:216
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
ALDH1A1 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) [READER]
Representative RNA-seq result indicating the expression of this target gene regulated by IGF2BP1
Cell Line A549 cell line Homo sapiens
Treatment: IGF2BP1 knockout A549 cells
Control: Wild type A549 cells
GSE146546
Regulation
logFC: -7.78E-01
p-value: 8.37E-08
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary IGF2BP1 decreases leukemia cells' tumorigenicity, promotes myeloid differentiation, increases leukemia cell death, and sensitizes acute myeloid leukemia cells to chemotherapeutic drugs. IGF2BP1 affects proliferation and tumorigenic potential of leukemia cells through critical regulators of self-renewal HOXB4 and MYB and through regulation of expression of the aldehyde dehydrogenase, Aldehyde dehydrogenase 1A1 (ALDH1A1).
Target Regulation Up regulation
Responsed Disease Acute myeloid leukaemia ICD-11: 2A60
In-vitro Model MOLT-16 T acute lymphoblastic leukemia Homo sapiens CVCL_1424
Reh B acute lymphoblastic leukemia Homo sapiens CVCL_1650
SKNO-1 Myeloid leukemia with maturation Homo sapiens CVCL_2196
Tanoue B acute lymphoblastic leukemia Homo sapiens CVCL_1852
In-vivo Model For the engraftment experiments, 1×103 1×106 cells were injected into tail veins of non-irradiated 6-10 week-old female mice in 100 uL of DPBS per mouse. No blinding or randomization was applied to mice experiments. Routinely, each in vivo experiment was performed with three technical replicates (three mice per group) and independently repeated two to three times for each cell line.
Acute myeloid leukaemia [ICD-11: 2A60]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary IGF2BP1 decreases leukemia cells' tumorigenicity, promotes myeloid differentiation, increases leukemia cell death, and sensitizes acute myeloid leukemia cells to chemotherapeutic drugs. IGF2BP1 affects proliferation and tumorigenic potential of leukemia cells through critical regulators of self-renewal HOXB4 and MYB and through regulation of expression of the aldehyde dehydrogenase, Aldehyde dehydrogenase 1A1 (ALDH1A1).
Responsed Disease Acute myeloid leukaemia [ICD-11: 2A60]
Target Regulator Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) READER
Target Regulation Up regulation
In-vitro Model MOLT-16 T acute lymphoblastic leukemia Homo sapiens CVCL_1424
Reh B acute lymphoblastic leukemia Homo sapiens CVCL_1650
SKNO-1 Myeloid leukemia with maturation Homo sapiens CVCL_2196
Tanoue B acute lymphoblastic leukemia Homo sapiens CVCL_1852
In-vivo Model For the engraftment experiments, 1×103 1×106 cells were injected into tail veins of non-irradiated 6-10 week-old female mice in 100 uL of DPBS per mouse. No blinding or randomization was applied to mice experiments. Routinely, each in vivo experiment was performed with three technical replicates (three mice per group) and independently repeated two to three times for each cell line.
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00177)
Aldehyde dehydrogenase 1A1 (ALDH1A1)
N6-methyladenosine (m6A)
In total 12 m6A sequence/site(s) in this target gene
mod ID: M6ASITE088115 Click to Show/Hide the Full List
mod site chr9:72900884-72900885:- [2]
Sequence AATAATTTTATAGAAAAGGAACAGTTGCATTTAGCTTCTTT
Motif Score 2.951386905
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000297785.8
External Link RMBase: m6A_site_824290
mod ID: M6ASITE088116 Click to Show/Hide the Full List
mod site chr9:72901157-72901158:- [2]
Sequence CAATAGCTAAGCATCTCCTTACAGTCACTAATATAGTAGAT
Motif Score 2.07285119
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000297785.8
External Link RMBase: m6A_site_824291
mod ID: M6ASITE088117 Click to Show/Hide the Full List
mod site chr9:72912110-72912111:- [3]
Sequence TTCAAATAGATTGACAAGGAACAATATGATAAAATACTTGA
Motif Score 2.951386905
Cell/Tissue List CD34
Seq Type List m6A-seq
Transcript ID List ENST00000297785.8
External Link RMBase: m6A_site_824292
mod ID: M6ASITE088118 Click to Show/Hide the Full List
mod site chr9:72917100-72917101:- [4]
Sequence GAATGTCTTCTTCGCAGTGGACAATGCTGTTGAATTTGCAC
Motif Score 3.643047619
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000376939.5; ENST00000297785.8
External Link RMBase: m6A_site_824293
mod ID: M6ASITE088119 Click to Show/Hide the Full List
mod site chr9:72923878-72923879:- [4]
Sequence TTACTTATTTTAGCCTTCAAACATATGGATAGAATATAAGC
Motif Score 2.20572619
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000482210.5; ENST00000376939.5; ENST00000297785.8
External Link RMBase: m6A_site_824294
mod ID: M6ASITE088120 Click to Show/Hide the Full List
mod site chr9:72924058-72924059:- [2]
Sequence AGGGGCAGCCATTTCTTCTCACATGGATATAGACAAAGTAG
Motif Score 2.047297619
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000482210.5; ENST00000419959.5; ENST00000297785.8; ENST00000376939.5
External Link RMBase: m6A_site_824295
mod ID: M6ASITE088121 Click to Show/Hide the Full List
mod site chr9:72928994-72928995:- [4]
Sequence GAGTCAATGAATGGTGGAAAACTCTATTCCAATGCATATCT
Motif Score 2.627720238
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000446946.1; ENST00000297785.8; ENST00000376939.5; ENST00000482210.5; ENST00000419959.5; ENST00000493113.1
External Link RMBase: m6A_site_824296
mod ID: M6ASITE088122 Click to Show/Hide the Full List
mod site chr9:72930986-72930987:- [5]
Sequence AAGGCAGTGAAGGCCGCAAGACAGGCTTTTCAGATTGGATC
Motif Score 2.897386905
Cell/Tissue List HepG2; brain; kidney; liver; Huh7; endometrial
Seq Type List m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List ENST00000446946.1; ENST00000482210.5; ENST00000297785.8; ENST00000376939.5; ENST00000493113.1; ENST00000419959.5
External Link RMBase: m6A_site_824297
mod ID: M6ASITE088123 Click to Show/Hide the Full List
mod site chr9:72940241-72940242:- [6]
Sequence ATCTCTACAGATCTTCATAAACAATGAATGGCATGATTCAG
Motif Score 2.20572619
Cell/Tissue List HepG2; fibroblasts; A549; Huh7; iSLK; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000419959.5; ENST00000493113.1; ENST00000446946.1; ENST00000482210.5; ENST00000376939.5; ENST00000297785.8
External Link RMBase: m6A_site_824298
mod ID: M6ASITE088124 Click to Show/Hide the Full List
mod site chr9:72952977-72952978:- [5]
Sequence GTCATCCTCAGGCACGCCAGACTTACCTGTCCTACTCACCG
Motif Score 3.319380952
Cell/Tissue List HepG2; A549; fibroblasts; Huh7; iSLK; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000297785.8; ENST00000446946.1; ENST00000419959.5; ENST00000376939.5
External Link RMBase: m6A_site_824299
mod ID: M6ASITE088125 Click to Show/Hide the Full List
mod site chr9:72953046-72953047:- [5]
Sequence AAGCCAAGTGCTCTATCAGAACCAAATTGCTGAGCCAGTCA
Motif Score 2.930744048
Cell/Tissue List HepG2; A549; fibroblasts; Huh7; iSLK; endometrial
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000419959.5; ENST00000446946.1; ENST00000376939.5; ENST00000297785.8
External Link RMBase: m6A_site_824300
mod ID: M6ASITE088126 Click to Show/Hide the Full List
mod site chr9:73038597-73038598:- [7]
Sequence TGATCTTTGAAGAAAGCAAGACAGAAGAAGGGAGATGGAAA
Motif Score 2.897386905
Cell/Tissue List A549
Seq Type List m6A-seq
Transcript ID List ENST00000446946.1; ENST00000419959.5
External Link RMBase: m6A_site_824301