m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR00158)
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
MPG
can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
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Methyltransferase-like 3 (METTL3) [WRITER]
| Representative RNA-seq result indicating the expression of this target gene regulated by METTL3 | ||
| Cell Line | Caco-2 cell line | Homo sapiens |
|
Treatment: shMETTL3 Caco-2 cells
Control: shNTC Caco-2 cells
|
GSE167075 | |
| Regulation |
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logFC: -6.00E-01 p-value: 3.04E-08 |
| More Results | Click to View More RNA-seq Results | |
| In total 1 item(s) under this regulator | ||||
| Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene | [1] | |||
| Response Summary | Two critical DNA repair genes (MGMT and DNA-3-methyladenine glycosylase (ANPG/MPG)) were m6A-modified by METTL3, whereas inhibited by METTL3 silencing or DAA-mediated total methylation inhibition, which is crucial for METTL3-improved temozolomide resistance in glioblastoma cells. | |||
| Target Regulation | Down regulation | |||
| Responsed Disease | Glioblastoma | ICD-11: 2A00.00 | ||
| Responsed Drug | Temozolomide | Approved | ||
| Pathway Response | Nucleotide excision repair | hsa03420 | ||
| Cell Process | DNA repair | |||
| In-vitro Model | U251 (Fibroblasts or fibroblast like cells) | |||
| U-87MG ATCC | Glioblastoma | Homo sapiens | CVCL_0022 | |
| In-vivo Model | Subcutaneously injected shMETTL3 or shNC-expressing U87-MG-TMZ cells into BALB/c NOD mice. After confirmation of GBM implantation, mice were treated with TMZ (66 mg/kg/d, 5 d per week, for 3 cycles). | |||
Brain cancer [ICD-11: 2A00]
| In total 1 item(s) under this disease | ||||
| Experiment 1 Reporting the m6A-centered Disease Response | [1] | |||
| Response Summary | Two critical DNA repair genes (MGMT and DNA-3-methyladenine glycosylase (ANPG/MPG)) were m6A-modified by METTL3, whereas inhibited by METTL3 silencing or DAA-mediated total methylation inhibition, which is crucial for METTL3-improved temozolomide resistance in glioblastoma cells. | |||
| Responsed Disease | Glioblastoma [ICD-11: 2A00.00] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Down regulation | |||
| Responsed Drug | Temozolomide | Approved | ||
| Pathway Response | Nucleotide excision repair | hsa03420 | ||
| Cell Process | DNA repair | |||
| In-vitro Model | U251 (Fibroblasts or fibroblast like cells) | |||
| U-87MG ATCC | Glioblastoma | Homo sapiens | CVCL_0022 | |
| In-vivo Model | Subcutaneously injected shMETTL3 or shNC-expressing U87-MG-TMZ cells into BALB/c NOD mice. After confirmation of GBM implantation, mice were treated with TMZ (66 mg/kg/d, 5 d per week, for 3 cycles). | |||
Temozolomide
[Approved]
| In total 1 item(s) under this drug | ||||
| Experiment 1 Reporting the m6A-centered Drug Response | [1] | |||
| Response Summary | Two critical DNA repair genes (MGMT and DNA-3-methyladenine glycosylase (ANPG/MPG)) were m6A-modified by METTL3, whereas inhibited by METTL3 silencing or DAA-mediated total methylation inhibition, which is crucial for METTL3-improved temozolomide resistance in glioblastoma cells. | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Down regulation | |||
| Responsed Disease | Glioblastoma | ICD-11: 2A00.00 | ||
| Pathway Response | Nucleotide excision repair | hsa03420 | ||
| Cell Process | DNA repair | |||
| In-vitro Model | U251 (Fibroblasts or fibroblast like cells) | |||
| U-87MG ATCC | Glioblastoma | Homo sapiens | CVCL_0022 | |
| In-vivo Model | Subcutaneously injected shMETTL3 or shNC-expressing U87-MG-TMZ cells into BALB/c NOD mice. After confirmation of GBM implantation, mice were treated with TMZ (66 mg/kg/d, 5 d per week, for 3 cycles). | |||
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: Methyltransferase-like 3 (METTL3)
| In total 2 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT03298 | ||
| Epigenetic Regulator | Histone-lysine N-methyltransferase EZH2 (EZH2) | |
| Regulated Target | Histone H3 lysine 27 acetylation (H3K27ac) | |
| Crosstalk relationship | Histone modification → m6A | |
| Disease | Brain cancer | |
| Drug | Temozolomide | |
| Crosstalk ID: M6ACROT03302 | ||
| Epigenetic Regulator | Histone-lysine N-methyltransferase EZH2 (EZH2) | |
| Regulated Target | Histone H3 lysine 27 acetylation (H3K27ac) | |
| Crosstalk relationship | Histone modification → m6A | |
| Disease | Brain cancer | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00158)
| In total 5 m6A sequence/site(s) in this target gene | |||
| mod ID: M5CSITE000493 | Click to Show/Hide the Full List | ||
| mod site | chr16:79153-79154:+ | ||
| Sequence | CCCAGGTCATGCAGCCTGGGCCCCCATGCCGTGCAGCTCGC | ||
| Cell/Tissue List | T24 | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000219431.4; ENST00000356432.7; ENST00000397817.5; ENST00000436333.5; ENST00000475280.1 | ||
| External Link | RMBase: m5C_site_14634 | ||
| mod ID: M5CSITE000494 | Click to Show/Hide the Full List | ||
| mod site | chr16:79154-79155:+ | ||
| Sequence | CCAGGTCATGCAGCCTGGGCCCCCATGCCGTGCAGCTCGCA | ||
| Cell/Tissue List | T24 | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000219431.4; ENST00000356432.7; ENST00000436333.5; ENST00000475280.1; ENST00000397817.5 | ||
| External Link | RMBase: m5C_site_14635 | ||
| mod ID: M5CSITE000495 | Click to Show/Hide the Full List | ||
| mod site | chr16:79155-79156:+ | ||
| Sequence | CAGGTCATGCAGCCTGGGCCCCCATGCCGTGCAGCTCGCAC | ||
| Cell/Tissue List | T24 | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000356432.7; ENST00000475280.1; ENST00000219431.4; ENST00000436333.5; ENST00000397817.5 | ||
| External Link | RMBase: m5C_site_14636 | ||
| mod ID: M5CSITE000496 | Click to Show/Hide the Full List | ||
| mod site | chr16:79156-79157:+ | ||
| Sequence | AGGTCATGCAGCCTGGGCCCCCATGCCGTGCAGCTCGCACA | ||
| Cell/Tissue List | T24 | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000436333.5; ENST00000397817.5; ENST00000219431.4; ENST00000356432.7; ENST00000475280.1 | ||
| External Link | RMBase: m5C_site_14637 | ||
| mod ID: M5CSITE000497 | Click to Show/Hide the Full List | ||
| mod site | chr16:83261-83262:+ | [3] | |
| Sequence | ACATCTCCAGCCAGGGTGAGCAGTGCTGGGGCACGGGGGGT | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000356432.7; ENST00000219431.4; ENST00000397817.5; ENST00000436333.5 | ||
| External Link | RMBase: m5C_site_14638 | ||
N6-methyladenosine (m6A)
| In total 22 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE025088 | Click to Show/Hide the Full List | ||
| mod site | chr16:77011-77012:+ | [4] | |
| Sequence | CCTGTTAGCCTTTCTGTAGGACCAGGTGTCACACTCATCTG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000436333.5 | ||
| External Link | RMBase: m6A_site_298328 | ||
| mod ID: M6ASITE025089 | Click to Show/Hide the Full List | ||
| mod site | chr16:77042-77043:+ | [4] | |
| Sequence | CACTCATCTGAGGGCTCCAGACACATGGCCTGTGCGTCTGT | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000397817.5; ENST00000436333.5 | ||
| External Link | RMBase: m6A_site_298329 | ||
| mod ID: M6ASITE025090 | Click to Show/Hide the Full List | ||
| mod site | chr16:78088-78089:+ | [4] | |
| Sequence | GGGCCCGGGAATCGGTCCGGACCTGGCGGTGGGCGCTGGGA | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HEK293A-TOA | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000397817.5; ENST00000356432.7; ENST00000436333.5 | ||
| External Link | RMBase: m6A_site_298330 | ||
| mod ID: M6ASITE025091 | Click to Show/Hide the Full List | ||
| mod site | chr16:79321-79322:+ | [4] | |
| Sequence | CCCGCTTTGCAGATGAAGAAACCAAAGCAGGTGGTCAGATC | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; MM6; HEK293T; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000436333.5; ENST00000219431.4; ENST00000356432.7; ENST00000475280.1; ENST00000397817.5 | ||
| External Link | RMBase: m6A_site_298331 | ||
| mod ID: M6ASITE025092 | Click to Show/Hide the Full List | ||
| mod site | chr16:79573-79574:+ | [4] | |
| Sequence | CCCAGGGAGCGCTGCTTGGGACCGCCCACCACTCCGGGCCC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; MM6; HEK293T; endometrial; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000219431.4; ENST00000397817.5; ENST00000356432.7; ENST00000436333.5; ENST00000475280.1 | ||
| External Link | RMBase: m6A_site_298332 | ||
| mod ID: M6ASITE025093 | Click to Show/Hide the Full List | ||
| mod site | chr16:79696-79697:+ | [5] | |
| Sequence | CTGGCCCGGGCATTTCTGGGACAGGTAATGTGAACATAGCA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000475280.1; ENST00000436333.5; ENST00000356432.7; ENST00000219431.4; ENST00000397817.5 | ||
| External Link | RMBase: m6A_site_298333 | ||
| mod ID: M6ASITE025094 | Click to Show/Hide the Full List | ||
| mod site | chr16:79709-79710:+ | [5] | |
| Sequence | TTCTGGGACAGGTAATGTGAACATAGCAGCGAGGGCCCTCC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000475280.1; ENST00000219431.4; ENST00000356432.7; ENST00000436333.5; ENST00000397817.5 | ||
| External Link | RMBase: m6A_site_298334 | ||
| mod ID: M6ASITE025095 | Click to Show/Hide the Full List | ||
| mod site | chr16:79760-79761:+ | [5] | |
| Sequence | GTCACTGCAGTTGTCCCTGAACCCCTGTCCGCTGCCTGCTG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000219431.4; ENST00000356432.7; ENST00000436333.5; ENST00000397817.5; ENST00000475280.1 | ||
| External Link | RMBase: m6A_site_298335 | ||
| mod ID: M6ASITE025096 | Click to Show/Hide the Full List | ||
| mod site | chr16:83083-83084:+ | [6] | |
| Sequence | CGACTTCCTAATGGCACAGAACTCCGAGGCCGCATCGTGGA | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; MT4; MM6; peripheral-blood; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000356432.7; ENST00000219431.4; ENST00000397817.5; ENST00000436333.5 | ||
| External Link | RMBase: m6A_site_298336 | ||
| mod ID: M6ASITE025097 | Click to Show/Hide the Full List | ||
| mod site | chr16:83105-83106:+ | [7] | |
| Sequence | TCCGAGGCCGCATCGTGGAGACCGAGGCATACCTGGGGCCA | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HepG2; HeLa; MT4; MM6; peripheral-blood; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000436333.5; ENST00000397817.5; ENST00000219431.4; ENST00000356432.7 | ||
| External Link | RMBase: m6A_site_298337 | ||
| mod ID: M6ASITE025098 | Click to Show/Hide the Full List | ||
| mod site | chr16:83162-83163:+ | [7] | |
| Sequence | ACTCAAGGGGTGGCCGGCAGACCCCCCGCAACCGAGGCATG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HepG2; HeLa; MT4; MM6; peripheral-blood; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000219431.4; ENST00000436333.5; ENST00000397817.5; ENST00000356432.7 | ||
| External Link | RMBase: m6A_site_298338 | ||
| mod ID: M6ASITE025099 | Click to Show/Hide the Full List | ||
| mod site | chr16:83198-83199:+ | [7] | |
| Sequence | GCATGTTCATGAAGCCGGGGACCCTGTACGTGTACATCATT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HepG2; HeLa; MT4; MM6; peripheral-blood; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000356432.7; ENST00000219431.4; ENST00000397817.5; ENST00000436333.5 | ||
| External Link | RMBase: m6A_site_298339 | ||
| mod ID: M6ASITE025100 | Click to Show/Hide the Full List | ||
| mod site | chr16:83241-83242:+ | [4] | |
| Sequence | CGGCATGTACTTCTGCATGAACATCTCCAGCCAGGGTGAGC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HepG2; MM6; peripheral-blood; HEK293T; endometrial; NB4 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000219431.4; ENST00000436333.5; ENST00000397817.5; ENST00000356432.7 | ||
| External Link | RMBase: m6A_site_298340 | ||
| mod ID: M6ASITE025101 | Click to Show/Hide the Full List | ||
| mod site | chr16:85453-85454:+ | [4] | |
| Sequence | AGCCCCTGGAAGGTCTGGAGACCATGCGTCAGCTTCGCAGC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; MM6; peripheral-blood; GSC-11; HEK293T; endometrial; NB4 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000397817.5; ENST00000436333.5; ENST00000219431.4; ENST00000356432.7 | ||
| External Link | RMBase: m6A_site_298346 | ||
| mod ID: M6ASITE025102 | Click to Show/Hide the Full List | ||
| mod site | chr16:85511-85512:+ | [4] | |
| Sequence | CGCCAGCCGTGTCCTCAAGGACCGCGAGCTCTGCAGTGGCC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; H1A; A549; MM6; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; MSC; TIME; TREX; endometrial; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000397817.5; ENST00000436333.5; ENST00000356432.7; ENST00000219431.4 | ||
| External Link | RMBase: m6A_site_298348 | ||
| mod ID: M6ASITE025103 | Click to Show/Hide the Full List | ||
| mod site | chr16:85583-85584:+ | [4] | |
| Sequence | CAAGAGCTTTGACCAGAGGGACCTGGCACAGGATGAAGCTG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; H1A; H1B; A549; MM6; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; MSC; TIME; TREX; iSLK; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000397817.5; ENST00000356432.7; ENST00000436333.5; ENST00000219431.4 | ||
| External Link | RMBase: m6A_site_298349 | ||
| mod ID: M6ASITE025104 | Click to Show/Hide the Full List | ||
| mod site | chr16:85698-85699:+ | [4] | |
| Sequence | GCAGGGGAGTGGGCCCGGAAACCCCTCCGCTTCTATGTCCG | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; HepG2; LCLs; A549; MM6; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; MSC; TIME; TREX; iSLK; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000397817.5; ENST00000219431.4; ENST00000356432.7 | ||
| External Link | RMBase: m6A_site_298351 | ||
| mod ID: M6ASITE025105 | Click to Show/Hide the Full List | ||
| mod site | chr16:85745-85746:+ | [8] | |
| Sequence | CCCCTGGGTCAGTGTGGTCGACAGAGTGGCTGAGCAGGACA | ||
| Motif Score | 2.865571429 | ||
| Cell/Tissue List | CD8T | ||
| Seq Type List | m6A-CLIP/IP | ||
| Transcript ID List | ENST00000219431.4; ENST00000356432.7; ENST00000397817.5 | ||
| External Link | RMBase: m6A_site_298353 | ||
| mod ID: M6ASITE025106 | Click to Show/Hide the Full List | ||
| mod site | chr16:85763-85764:+ | [4] | |
| Sequence | CGACAGAGTGGCTGAGCAGGACACACAGGCCTGAGCAAAGG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; A549; LCLs; MM6; CD4T; peripheral-blood; GSC-11; HEK293T; TREX; iSLK; MSC; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq; m6A-CLIP/IP | ||
| Transcript ID List | ENST00000356432.7; ENST00000219431.4; ENST00000397817.5 | ||
| External Link | RMBase: m6A_site_298354 | ||
| mod ID: M6ASITE025107 | Click to Show/Hide the Full List | ||
| mod site | chr16:85794-85795:+ | [4] | |
| Sequence | TGAGCAAAGGGCCTGCCCAGACAAGATTTTTTAATTGTTTA | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; LCLs; MM6; CD4T; peripheral-blood; GSC-11; TREX; iSLK; MSC; endometrial; NB4 | ||
| Seq Type List | m6A-seq; DART-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000356432.7; ENST00000219431.4; ENST00000397817.5 | ||
| External Link | RMBase: m6A_site_298355 | ||
| mod ID: M6ASITE025108 | Click to Show/Hide the Full List | ||
| mod site | chr16:85818-85819:+ | [4] | |
| Sequence | GATTTTTTAATTGTTTAAAAACCGAATAAATGTTTTATTTC | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; HepG2; A549; LCLs; MM6; CD4T; peripheral-blood; GSC-11; HEK293T; TREX; iSLK; MSC; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000397817.5; ENST00000356432.7; ENST00000219431.4 | ||
| External Link | RMBase: m6A_site_298357 | ||
| mod ID: M6ASITE025109 | Click to Show/Hide the Full List | ||
| mod site | chr16:85845-85846:+ | [4] | |
| Sequence | AAATGTTTTATTTCTAGAAAACTGTGCCTTAGCCAGAGCTC | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; A549; LCLs; MM6; peripheral-blood; MSC; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000356432.7; ENST00000397817.5 | ||
| External Link | RMBase: m6A_site_298359 | ||
References

