m6A Target Genes of This Regulator

General Information of the m6A Regulator (ID: REG00003)
Regulator Name Heterogeneous nuclear ribonucleoproteins C1/C2 (HNRNPC)
Synonyms
hnRNP C1/C2; HNRPC
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Gene Name HNRNPC
Regulator Type ERASER READER WRITER
Regulator Link Click to View Full Information of This Regulator
Full List of Target Gene(s) of This m6A Regulator ( Full Data Download )
Protein coding
Gene with protein product
In total 3483 target gene(s)
A-kinase anchoring protein 10 (AKAP10) [1]
HGNC ID HGNC:368
Ensembl ID ENSG00000108599
Uniprot ID AKA10_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Abhydrolase domain containing 8 (ABHD8) [1]
HGNC ID HGNC:23759
Ensembl ID ENSG00000127220
Uniprot ID ABHD8_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
ABL proto-oncogene 2, non-receptor tyrosine kinase (ABL2) [1]
HGNC ID HGNC:77
Ensembl ID ENSG00000143322
Uniprot ID ABL2_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Acetyl-CoA carboxylase alpha (ACACA) [1]
HGNC ID HGNC:84
Ensembl ID ENSG00000278540
Uniprot ID ACACA_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Actin beta (ACTB) [1]
HGNC ID HGNC:132
Ensembl ID ENSG00000075624
Uniprot ID ACTB_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Activating transcription factor 4 (ATF4) [1]
HGNC ID HGNC:786
Ensembl ID ENSG00000128272
Uniprot ID ATF4_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Adaptor related protein complex 4 subunit sigma 1 (AP4S1) [1]
HGNC ID HGNC:575
Ensembl ID ENSG00000100478
Uniprot ID AP4S1_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Adenylate kinase 2 (AK2) [1]
HGNC ID HGNC:362
Ensembl ID ENSG00000004455
Uniprot ID KAD2_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Adenylosuccinate synthase 2 (ADSS) [1]
HGNC ID HGNC:292
Ensembl ID ENSG00000035687
Uniprot ID PURA2_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
ADP ribosylation factor like GTPase 5B (ARL5B) [1]
HGNC ID HGNC:23052
Ensembl ID ENSG00000165997
Uniprot ID ARL5B_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Pseudogene
Pseudogene
In total 293 target gene(s)
Glycogenin 2 pseudogene 1 (GYG2P1) [1]
HGNC ID HGNC:4701
Ensembl ID ENSG00000206159
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
GUSB pseudogene 4 (GUSBP4) [1]
HGNC ID HGNC:18220
Ensembl ID ENSG00000239650
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Importin 5 pseudogene 1 (IPO5P1) [1]
HGNC ID HGNC:49687
Ensembl ID ENSG00000269837
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Mitochondrial ribosomal protein S31 pseudogene 5 (MRPS31P5) [1]
HGNC ID HGNC:39253
Ensembl ID ENSG00000243406
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MT-RNR2 like 1 (pseudogene) (MTRNR2L1) [1]
HGNC ID HGNC:37155
Ensembl ID ENSG00000256618
Uniprot ID HMN1_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MT-RNR2 like 2 (pseudogene) (MTRNR2L2) [1]
HGNC ID HGNC:37156
Ensembl ID ENSG00000271043
Uniprot ID HMN2_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MT-RNR2 like 6 (pseudogene) (MTRNR2L6) [1]
HGNC ID HGNC:37163
Ensembl ID ENSG00000270672
Uniprot ID HMN6_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MT-RNR2 like 8 (pseudogene) (MTRNR2L8) [1]
HGNC ID HGNC:37165
Ensembl ID ENSG00000255823
Uniprot ID HMN8_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Neurotrophin receptor associated death domain, pseudogene (NRADDP) [1]
HGNC ID HGNC:19337
Ensembl ID ENSG00000236409
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
NSUN5 pseudogene 2 (NSUN5P2) [1]
HGNC ID HGNC:16609
Ensembl ID ENSG00000106133
Uniprot ID NSN5C_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Long non-coding
Long non-coding RNA
In total 284 target gene(s)
AGBL5 antisense RNA 1 (AGBL5-AS1) [1]
HGNC ID HGNC:41133
Ensembl ID ENSG00000231636
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Alu-mediated CDKN1A/p21 transcriptional regulator (APTR) [1]
HGNC ID HGNC:44173
Ensembl ID ENSG00000214293
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Apoptosis associated transcript in bladder cancer (AATBC) [1]
HGNC ID HGNC:51526
Ensembl ID ENSG00000215458
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
ARIH2 opposite strand lncRNA (ARIH2OS) [1]
HGNC ID HGNC:34425
Ensembl ID ENSG00000221883
Uniprot ID ARI2O_HUMAN
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
B4GAT1 divergent transcript (LOC102724064) [1]
HGNC ID HGNC:56070
Ensembl ID ENSG00000255468
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
cell fate and sterol metabolism associated divergent transcript of MOCOS (LOC101927809) [1]
HGNC ID HGNC:51610
Ensembl ID ENSG00000260552
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
CMKLR2 antisense RNA (GPR1-AS) [1]
HGNC ID HGNC:48602
Ensembl ID ENSG00000279220
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
CNTNAP2 antisense RNA 1 (LOC101928700) [1]
HGNC ID HGNC:40657
Ensembl ID ENSG00000236795
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
EMC3 antisense RNA 1 (EMC3-AS1) [1]
HGNC ID HGNC:49223
Ensembl ID ENSG00000180385
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
GPR107 adjacent cis regulating lncRNA (LOC401554) [1]
HGNC ID HGNC:53957
Ensembl ID ENSG00000196979
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Short non-coding
Micro RNA
In total 51 target gene(s)
microRNA 10a (MIR10A) [1]
HGNC ID HGNC:31497
Ensembl ID ENSG00000284038
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 1227 (MIR1227) [1]
HGNC ID HGNC:33932
Ensembl ID ENSG00000221411
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 1278 (MIR1278) [1]
HGNC ID HGNC:35356
Ensembl ID ENSG00000221680
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
microRNA 1306 (MIR1306) [1]
HGNC ID HGNC:35371
Ensembl ID ENSG00000284464
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 148a (MIR148A) [1]
HGNC ID HGNC:31535
Ensembl ID ENSG00000199085
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 16-2 (MIR16-2) [1]
HGNC ID HGNC:31546
Ensembl ID ENSG00000198987
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
microRNA 1914 (MIR1914) [1]
HGNC ID HGNC:35398
Ensembl ID ENSG00000284433
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
microRNA 19b-1 (MIR19B1) [1]
HGNC ID HGNC:31575
Ensembl ID ENSG00000284375
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 3190 (MIR3190) [1]
HGNC ID HGNC:38190
Ensembl ID ENSG00000265134
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 3620 (MIR3620) [1]
HGNC ID HGNC:38917
Ensembl ID ENSG00000284163
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Ribosomal RNA
In total 4 target gene(s)
RNA, 18S ribosomal 5 (RNA18S5) [1]
HGNC ID HGNC:37657
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 28S ribosomal 5 (RNA28S5) [1]
HGNC ID HGNC:37659
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5.8S ribosomal 5 (RNA5-8S5) [1]
HGNC ID HGNC:37660
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5S ribosomal 9 (RNA5S9) [1]
HGNC ID HGNC:34370
Ensembl ID ENSG00000201321
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Small nuclear RNA
In total 6 target gene(s)
RNA, U2 small nuclear 1 (RNU2-1) [1]
HGNC ID HGNC:10142
Ensembl ID ENSG00000274585
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U4atac small nuclear (RNU4ATAC) [1]
HGNC ID HGNC:34016
Ensembl ID ENSG00000264229
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U5A small nuclear 1 (RNU5A-1) [1]
HGNC ID HGNC:10211
Ensembl ID ENSG00000199568
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U1 small nuclear 4 (RNU1-4) [4]
HGNC ID HGNC:10128
Ensembl ID ENSG00000207389
Method RNA-seq GSE140679
Condition knock out
Evidence logFC: -0.870458171; p-value: 0.001106155
Cell Line SKOV3.ip1 cell line Ovarian cancer Homo sapiens CVCL_0C84
RNA, U6 small nuclear 1 (RNU6-1) [4]
HGNC ID HGNC:10227
Ensembl ID ENSG00000206625
Method RNA-seq GSE140679
Condition knock out
Evidence logFC: 1.102486143; p-value: 0.001064149
Cell Line SKOV3.ip1 cell line Ovarian cancer Homo sapiens CVCL_0C84
RNA, variant U1 small nuclear 6 (RNVU1-6) [4]
HGNC ID HGNC:48314
Ensembl ID ENSG00000201558
Method RNA-seq GSE140679
Condition knock out
Evidence logFC: 1.081674962; p-value: 0.01746193
Cell Line SKOV3.ip1 cell line Ovarian cancer Homo sapiens CVCL_0C84
Click to Download All Target Gene of This Genetic Class
Small nucleolar RNA
In total 57 target gene(s)
Small Cajal body-specific RNA 18B (SCARNA18B) [1]
HGNC ID HGNC:52236
Ensembl ID ENSG00000238754
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small Cajal body-specific RNA 23 (SCARNA23) [1]
HGNC ID HGNC:32581
Ensembl ID ENSG00000251869
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 100 (SNORD100) [1]
HGNC ID HGNC:32763
Ensembl ID ENSG00000221500
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 101 (SNORD101) [1]
HGNC ID HGNC:32764
Ensembl ID ENSG00000206754
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 110 (SNORD110) [1]
HGNC ID HGNC:32775
Ensembl ID ENSG00000221116
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 117 (SNORD117) [1]
HGNC ID HGNC:32742
Ensembl ID ENSG00000201785
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 135 (SNORD135) [1]
HGNC ID HGNC:50416
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 141A (SNORD141A) [1]
HGNC ID HGNC:51406
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 14D (SNORD14D) [1]
HGNC ID HGNC:30353
Ensembl ID ENSG00000207118
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 15B (SNORD15B) [1]
HGNC ID HGNC:16649
Ensembl ID ENSG00000207445
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Y RNA
In total 1 target gene(s)
RNA, Ro60-associated Y4 (RNY4) [1]
HGNC ID HGNC:10244
Ensembl ID ENSG00000252316
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Other
Complex locus constituent
In total 2 target gene(s)
UDP glucuronosyltransferase family 1 member A10 (UGT1A10) [3]
HGNC ID HGNC:12531
Ensembl ID ENSG00000242515
Uniprot ID UD110_HUMAN
Method RNA-seq GSE199483
Condition knock down
Evidence logFC: -1.75169915; p-value: 0.000870187
Cell Line H1299 cell lines Lung large cell carcinoma Homo sapiens CVCL_0060
UDP glucuronosyltransferase family 1 member A8 (UGT1A8) [3]
HGNC ID HGNC:12540
Ensembl ID ENSG00000242366
Uniprot ID UD18_HUMAN
Method RNA-seq GSE199483
Condition knock down
Evidence logFC: 0.637137183; p-value: 0.000284632
Cell Line H1299 cell lines Lung large cell carcinoma Homo sapiens CVCL_0060
Click to Download All Target Gene of This Genetic Class
Endogenous retrovirus
In total 3 target gene(s)
Endogenous retrovirus group K13 member 1 (ERVK13-1) [2]
HGNC ID HGNC:27548
Ensembl ID ENSG00000260565
Uniprot ID ENK13_HUMAN
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -0.912350412; p-value: 0.001378029
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Endogenous retrovirus group K3 member 1 (ERVK3-1) [2]
HGNC ID HGNC:30466
Ensembl ID ENSG00000142396
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -0.703776285; p-value: 0.00012269
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Endogenous retrovirus group K9, member 11 (ERVK9-11) [2]
HGNC ID HGNC:51160
Ensembl ID ENSG00000269486
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -0.804564723; p-value: 0.006078701
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Click to Download All Target Gene of This Genetic Class
Protocadherin
In total 5 target gene(s)
Protocadherin gamma subfamily A, 6 (PCDHGA6) [2]
HGNC ID HGNC:8704
Ensembl ID ENSG00000253731
Uniprot ID PCDG6_HUMAN
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -0.746592546; p-value: 0.027959275
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Protocadherin gamma subfamily B, 3 (PCDHGB3) [2]
HGNC ID HGNC:8710
Ensembl ID ENSG00000262209
Uniprot ID PCDGF_HUMAN
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -0.694722837; p-value: 0.010462664
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Protocadherin gamma subfamily C, 3 (PCDHGC3) [2]
HGNC ID HGNC:8716
Ensembl ID ENSG00000240184
Uniprot ID PCDGK_HUMAN
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -1.18733963; p-value: 0.001307679
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Protocadherin gamma subfamily C, 4 (PCDHGC4) [2]
HGNC ID HGNC:8717
Ensembl ID ENSG00000242419
Uniprot ID PCDGL_HUMAN
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -0.666731741; p-value: 0.009386146
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Protocadherin gamma subfamily C, 5 (PCDHGC5) [2]
HGNC ID HGNC:8718
Ensembl ID ENSG00000240764
Uniprot ID PCDGM_HUMAN
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -1.173689153; p-value: 0.006161255
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Click to Download All Target Gene of This Genetic Class
Readthrough
In total 19 target gene(s)
PMF1-BGLAP readthrough (PMF1-BGLAP) [1]
HGNC ID HGNC:42953
Ensembl ID ENSG00000260238
Method PARCLIP-seq GSE56010
Cell Line HEK293T Normal Homo sapiens CVCL_0063
ARHGAP19-SLIT1 readthrough (NMD candidate) (ARHGAP19-SLIT1) [2]
HGNC ID HGNC:48348
Ensembl ID ENSG00000269891
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -0.728823473; p-value: 0.005204562
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
ARMCX5-GPRASP2 readthrough (ARMCX5-GPRASP2) [2]
HGNC ID HGNC:42000
Ensembl ID ENSG00000271147
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -1.117005038; p-value: 0.029417498
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
ATP6V1G2-DDX39B readthrough (NMD candidate) (ATP6V1G2-DDX39B) [2]
HGNC ID HGNC:41999
Ensembl ID ENSG00000254870
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -0.611162971; p-value: 0.029176901
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
BCL2L2-PABPN1 readthrough (BCL2L2-PABPN1) [2]
HGNC ID HGNC:42959
Ensembl ID ENSG00000258643
Uniprot ID B2CL2_HUMAN
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: 0.700810802; p-value: 5.89E-06
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
BMS1P4-AGAP5 readthrough (BMS1P4-AGAP5) [2]
HGNC ID HGNC:55636
Ensembl ID ENSG00000242288
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: 2.155950385; p-value: 0.002871511
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
HSPE1-MOB4 readthrough (HSPE1-MOB4) [2]
HGNC ID HGNC:49184
Ensembl ID ENSG00000270757
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: 1.338971859; p-value: 0.009379849
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
NDUFC2-KCTD14 readthrough (NDUFC2-KCTD14) [3]
HGNC ID HGNC:42956
Ensembl ID ENSG00000259112
Uniprot ID NDUCR_HUMAN
Method RNA-seq GSE199483
Condition knock down
Evidence logFC: 0.832925924; p-value: 0.003812473
Cell Line H1299 cell lines Lung large cell carcinoma Homo sapiens CVCL_0060
PEDS1-UBE2V1 readthrough (PEDS1-UBE2V1) [2]
HGNC ID HGNC:33521
Ensembl ID ENSG00000124208
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: 0.774955762; p-value: 5.32E-05
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
PRR5-ARHGAP8 readthrough (PRR5-ARHGAP8) [2]
HGNC ID HGNC:34512
Ensembl ID ENSG00000248405
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -0.627710011; p-value: 0.016544954
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Click to Download All Target Gene of This Genetic Class
Unknown
In total 6 target gene(s)
Acidic nuclear phosphoprotein 32 family member C (ANP32C) [4]
HGNC ID HGNC:16675
Ensembl ID ENSG00000248546
Uniprot ID AN32C_HUMAN
Method RNA-seq GSE140679
Condition knock out
Evidence logFC: 1.158584183; p-value: 0.004374217
Cell Line SKOV3.ip1 cell line Ovarian cancer Homo sapiens CVCL_0C84
ArfGAP with GTPase domain, ankyrin repeat and PH domain 11 (AGAP11) [2]
HGNC ID HGNC:29421
Ensembl ID ENSG00000261011
Uniprot ID AGA11_HUMAN
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: -0.848210518; p-value: 3.54E-05
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Chromosome 1 putative open reading frame 220 (C1orf220) [2]
HGNC ID HGNC:33805
Ensembl ID ENSG00000213057
Uniprot ID CA220_HUMAN
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: 0.631630723; p-value: 0.000658175
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Chromosome 19 putative open reading frame 48 (C19orf48) [2]
HGNC ID HGNC:29667
Ensembl ID ENSG00000167747
Uniprot ID CS048_HUMAN
Method RNA-seq GSE63086
Condition knock down
Evidence logFC: 0.823116542; p-value: 0.021890172
Cell Line MG63 cell line Osteosarcoma Homo sapiens CVCL_0426
Chromosome 22 putative open reading frame 46 (C22orf46) [3]
HGNC ID HGNC:26294
Ensembl ID ENSG00000184208
Uniprot ID CV046_HUMAN
Method RNA-seq GSE199483
Condition knock down
Evidence logFC: -1.262796863; p-value: 0.002121173
Cell Line H1299 cell lines Lung large cell carcinoma Homo sapiens CVCL_0060
NBPF member 8 (NBPF8) [3]
HGNC ID HGNC:31990
Ensembl ID ENSG00000270231
Uniprot ID NBPF8_HUMAN
Method RNA-seq GSE199483
Condition knock down
Evidence logFC: 0.770609693; p-value: 0.002575993
Cell Line H1299 cell lines Lung large cell carcinoma Homo sapiens CVCL_0060
Click to Download All Target Gene of This Genetic Class
References
Ref 1 N(6)-methyladenosine-dependent RNA structural switches regulate RNA-protein interactions. Nature. 2015 Feb 26;518(7540):560-4. doi: 10.1038/nature14234.
Ref 2 Concerted effects of heterogeneous nuclear ribonucleoprotein C1/C2 to control vitamin D-directed gene transcription and RNA splicing in human bone cells. Nucleic Acids Res. 2017 Jan 25;45(2):606-618.
Ref 3 RNA-seq in H1299 cell lines
Ref 4 RBFOX2 alters splicing outcome in distinct binding modes with multiple protein partners. Nucleic Acids Res. 2021 Aug 20;49(14):8370-8383.