m6A-centered Crosstalk Information
Mechanism of Crosstalk between m6A Modification and Epigenetic Regulation
| Crosstalk ID |
M6ACROT05958
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[1] | |||
m6A modification
DANCR
DANCR
LRPPRC
: m6A sites
Direct
Enhancement
Non-coding RNA
DANCR
IL11
lncRNA miRNA circRNA
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| m6A Modification: | |||||
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| m6A Regulator | Leucine-rich PPR motif-containing protein, mitochondrial (LRPPRC) | READER | |||
| m6A Target | Differentiation antagonizing non-protein coding RNA (DANCR) | ||||
| Epigenetic Regulation that have Cross-talk with This m6A Modification: | |||||
| Epigenetic Regulation Type | Non-coding RNA (ncRNA) | ||||
| Epigenetic Regulator | Differentiation antagonizing non-protein coding RNA (DANCR) | LncRNA | View Details | ||
| Regulated Target | Interleukin-11 (IL11) | View Details | |||
| Crosstalk Relationship | m6A → ncRNA | Enhancement | |||
| Crosstalk Mechanism | m6A regulators directly modulate the functionality of ncRNAs through specific targeting ncRNA | ||||
| Crosstalk Summary | Differentiation antagonizing non-protein coding RNA (DANCR) activated Interleukin-11 (IL11)-STAT3 signaling and increased CCND1 and PLAU expression via guiding leucine-rich pentatricopeptide repeat containing (LRPPRC) to stabilize mRNA. | ||||
| Responsed Disease | Bladder cancer | ICD-11: 2C94 | |||
| Responsed Drug | BP-1-102 | ||||
| Pathway Response | JAK-STAT signaling pathway | hsa04630 | |||
| Cell Process | Cell migration | ||||
| Cell invasion | |||||
| Cell proliferation | |||||
| mRNA stability | |||||
In-vitro Model |
UM-UC-3 | Bladder carcinoma | Homo sapiens | CVCL_1783 | |
| T24 | Bladder carcinoma | Homo sapiens | CVCL_0554 | ||
| HEK293T | Normal | Homo sapiens | CVCL_0063 | ||
| In-vivo Model | Ten mice were included in each group, and lentivirus-transduced UM-UC-3 cells (3 × 106 cells) that stably expressed firefly luciferase were inoculated into the mice's footpads. | ||||
Full List of Potential Compound(s) Related to This m6A-centered Crosstalk
| Interleukin-11 (IL11) | 1 Compound(s) Regulating the Target | Click to Show/Hide the Full List | ||
| VM-501 | Phase 3 | [2] | ||
| Synonyms |
IL-11 agonist (thrombocytopenia, small molecule therapeutic/iv/sc), Viromed
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| MOA | Agonist | |||
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| 2C94: Bladder cancer | 83 Compound(s) Regulating the Disease | Click to Show/Hide the Full List | ||
| Enfortumab vedotin | Phase 3 | [3] | ||
| Synonyms |
Padcev
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| Atezolizumab | Approved | [4] | ||
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| Halaven | Phase 1/2 | [4] | ||
| Synonyms |
Eribulin mesylate; Eribulin (mesylate); Eribulin mesilate; UNII-AV9U0660CW; Eribulin mesylate [USAN]; 441045-17-6; AV9U0660CW; CHEBI:70710; E 7389; E7389; Eribulin mesylate (USAN); B-1939; NSC-707389; Eribulin mesilate (JAN); CHEMBL1683544; QAMYWGZHLCQOOJ-WRNBYXCMSA-N; HY-13442A; AKOS030238218; CS-2803; D08914; 2-(3-amino-2-hydroxypropyl)hexacosahydro-3-methoxy-26-methyl-20,27-bis(methylene)11,15-18,21-24,28-triepoxy-7,9-ethano-12,15-methano-9H,15H-furo(3,2-i)furo(2',3'-5,6)pyrano(4,3-b)(1,4)dioxacyclopent
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| RG-7446 | Approved | [5] | ||
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| Pemigatinib | Approved | [4] | ||
| Synonyms |
Unii-Y6BX7BL23K; Y6BX7BL23K; GTPL9767; SCHEMBL15556271; HCDMJFOHIXMBOV-UHFFFAOYSA-N; example 126 [WO2014007951]; 3-(2,6-difluoro-3,5-dimethoxyphenyl)-1-ethyl-8-(morpholin-4-ylmethyl)-4,7-dihydropyrrolo[4,5]pyrido[1,2-d]pyrimidin-2-one; 3-(2,6-difluoro-3,5-dimethoxyphenyl)-1-ethyl-8-(morpholin-4-ylmethyl)-1,3,4,7-tetrahydro-2H-pyrrolo[3',2':5,6]pyrido[4,3-d]pyrimidin-2-one; INCB54828
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| Erdafitinib | Approved | [6] | ||
| Synonyms |
1346242-81-6; UNII-890E37NHMV; 890E37NHMV; Erdafitinib [USAN:INN]; Erdafitinib (USAN/INN); GTPL9039; SCHEMBL2583760; CHEMBL3545376; MolPort-044-560-398; JNJ-42756493 (Erdafitinib); s8401; compound 4 [WO2011135376]; ZINC168520308; AKOS030526429; CS-4988; DB12147; AC-30222; 1,2-Ethanediamine, N1-(3,5-dimethoxyphenyl)-N2-(1-methylethyl)-N1-(3-(1-methyl-1H-pyrazol-4-yl)-6-quinoxalinyl)-; HY-18708; AS-35040; KB-333716; D10927; N'-(3,5-dimethoxyphenyl)-N'-[3-(1-methylpyrazol-4-yl)quino
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| Hexyl aminolevulinate | Approved | [7] | ||
| Synonyms |
Hexvix (TN)
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| BCG vaccine | Approved | [7] | ||
| Synonyms |
OncoTice; TiceBCG; BCG vaccine, Organon
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| Valrubicin | Approved | [8] | ||
| Synonyms |
Valstar; Valrubicin [USAN]; Valstar Preservative Free; AD 32; Antibiotic AD 32; Valstar (TN); N-Trifluoroacetyladriamycin 14-valerate; N-Trifluoroacetyldoxorubicin 14-valerate; Trifluoroacetyladriamycin-14-valerate; Valrubicin (USP/INN); N-Trifluoroacetyladriamycin-14-valerate; Adriamycin, trifluoroacetyl-, 14-valerate; [2-oxo-2-[(2S,4S)-2,5,12-trihydroxy-4-[5-hydroxy-6-methyl-4-[(2,2,2-trifluoroacetyl)amino]oxan-2-yl]oxy-7-methoxy-6,11-dioxo-3,4-dihydro-1H-tetracen-2-yl]ethyl] pentanoate; (2S-cis)-2-(1,2,3,4,6,11-Hexahydro-2,5,12-trihydroxy-7-methoxy-6,11-dioxo-4-((2,3,6-trideoxy-3-((trifluoroacetyl)amino)-alpha-L-lyxo-hexopyranosyl)oxy)-2-naphthacenyl)-2-oxoethyl pentanoate; (2S-cis)-Pentanoic acid, 2-(1,2,3,4,6,11-hexahydro-2,5,12-trihydroxy-7-methoxy-6,11-dioxo-4-((2,3,6-trideoxy-3-((trifluoroacetyl)amino)-alpha-L-lyxo-hexopyranosyl)oxy)-2-naphth acenyl)-2-oxoethyl ester; (8S,10S)-8-Glycoloyl-7,8,9,10-tetrahydro-6,8,11-trihydroxy-1-methoxy-10-((2,3,6-trideoxy-3-(2,2,2-trifluoroacetamido)-alpha-L-lyxo-hexopyranosyl)oxy)-5,12-naphthacenedione 8(sup 2)-valerate; Pentanoic acid, 2-((2S,4S)-1,2,3,4,6,11-hexahydro-2,5,12-trihydroxy-7-methoxy-6,11-dioxo-4-((2,3,6-trideoxy-3-((trifluoroacetylamino)-, alpha-L-lysohexopyranoxyl)oxy)-2-naphthacenyl)-2-oxoethyl ester
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| Vicineum | Phase 3 | [9] | ||
| Synonyms |
Oportuzumab monatox
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| Sasanlimab | Phase 3 | [10] | ||
| Synonyms |
PF-06801591
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| CG0070 | Phase 3 | [11] | ||
| Synonyms |
CG-5757; Oncolytic virus therapy, Cell Genesys; Oncolytic virus therapy, Cold Genesys
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| Nadofaragene firadenovec | Phase 3 | [4] | ||
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| Oportuzumab monatox | Phase 3 | [11] | ||
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| Apaziquone | Phase 3 | [12] | ||
| Synonyms |
EOquin; 114560-48-4; Apaziquonum; NOR-701; EO 9 (pharmaceutical); EO-9; Apaziquone [USAN:INN]; NSC-382459; Apaziquonum [INN-Latin]; E 09; NSC 382459; UNII-H464ZO600O; E-85/053; E-09; EO9; NSC 382456; H464ZO600O; 5-(Azridin-1-yl)-3-(hydroxymethyl)-2-((1E)-3-hydroxyprop-1-enyl)-methyl-1H-indole-4,7-dione; (E)-5-(1-Azirinyl)-3-(hydroxymethyl)-2-(3-hydroxy-1-propenyl)-1-methyl-1H-indole-4,7-dione; E09; 1H-Indole-4,7-dione, 5-(1-aziridinyl)-3-(hydroxymethyl)-2-(3-hydroxy-1-propenyl)-1-methyl-, (E)-; Neoquin; Qapzola; EO 9; Eoquin (TN); Apaziquone (USAN/INN); E-85/050; 3-hydroxymethyl-5-aziridinyl-1-methyl-2-(1H-indole-4,7-dione)prop-beta-en-alpha-ol; 5-(aziridin-1-yl)-3-(hydroxymethyl)-2-[(E)-3-hydroxyprop-1-enyl]-1-methylindole-4,7-dione; Apaziquone/EOquin
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| Tesetaxel | Phase 2 | [13] | ||
| Synonyms |
DJ-927; 333754-36-2; UNII-UG97LO5M8Y; UG97LO5M8Y; Tesetaxel [INN]; DJ927; DJ 927; CHEMBL2107787; SCHEMBL12060837; DB12019; Z-3104; (2AS,2BR,3S,4S,6S,8AR,10R,11AS,11BR,13AR)-2A-ACETOXY-6-(((2R,3S)-3-((TERT-BUTOXYCARBONYL)AMINO)-3-(3-FLUOROPYRIDIN-2-YL)-2-HYDROXYPROPANOYL)OXY)-10-((DIMETHYLAMINO)METHYL)-4-HYDROXY-7,11B,14,14-TETRAMETHYL-2A,2B,3,4,5,6,8A,11A,11B,12,13,13A-DODECAHYDRO-2H-4,8-METHANOOXETO[3'',2'':3',4']BENZO[1',2':3,4]CYCLODECA[1,2-D][1,3]DIOXOL-3-YL BENZOATE
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| EN3488 | Phase 3 | [14] | ||
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| NKTR 214 | Phase 3 | [11] | ||
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| Ramucirumab | Phase 3 | [4] | ||
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| Vicinium | Phase 3 | [4] | ||
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| ICP-192 | Phase 2 | [15] | ||
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| Inodiftagene vixteplasmid | Phase 2 | [16] | ||
| Synonyms |
BC-819
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| CPX-POM | Phase 2 | [17] | ||
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| LY3012212 | Phase 2 | [18] | ||
| Synonyms |
Icrucumab
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| CV-301 | Phase 2 | [4] | ||
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| ABI-009 | Phase 2 | [4] | ||
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| ALT-801 | Phase 2 | [11] | ||
| Synonyms |
ALT-801 (donor lymphocyte infusion, cancer); ALT-801 (donor lymphocyte infusion, cancer), Altor; STAR IL-2 conjugate (donor lymphocyte infusion, cancer), Altor; STAR-Ck (donor lymphocyte infusion, cancer), Altor; Soluble T-cell Antigen Receptor IL-2 conjugate (donor lymphocyte infusion, cancer), Altor
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| INO-5401 | Phase 2 | [4] | ||
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| RX-3117 | Phase 2 | [4] | ||
| Synonyms |
Antimetabolite (cancer), Rexahn; Antimetabolite (cancer), Rexahn/ Teva
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| BC-819 | Phase 2 | [19] | ||
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| IPI-549 | Phase 2 | [20] | ||
| Synonyms |
XUMALORDVCFWKV-IBGZPJMESA-N; IPI549; 1693758-51-8; CHEMBL3984425; GTPL9563; SCHEMBL16629991; IPI 549; MolPort-044-756-207; EX-A1057; s8330; BDBM50192880; ZINC584906867; AKOS030627132; CS-6106; compound 26 [PMID: 27660692]; AC-29898; HY-100716; Pyrazolo[1,5-a]pyrimidine-3-carboxamide, 2-amino-N-[(1S)-1-[1,2-dihydro-8-[2-(1-methyl-1H-pyrazol-4-yl)ethynyl]-1-oxo-2-phenyl-3-isoquinolinyl]ethyl]-; 2-amino-N-[(1S)-1-[8-[2-(1-methylpyrazol-4-yl)ethynyl]-1-oxo-2-phenylisoquinolin-3-yl]ethyl]pyrazolo[1,5-a]pyrimidine-3-carboxamide; (S)-2-amino-N-(1-(8-((
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| B-701 | Phase 2 | [4] | ||
| Synonyms |
VKRFJPYJBOIVPD-UHFFFAOYSA-N; B 701; NSC 46406; 78218-88-9; Phosphorodiamidic acid, N,N-bis(2-chloroethyl)-N'-(3-hydroxypropyl)-, (3-chloropropyl) ester; AC1L3VIX; AC1Q6T2K; NSC46406; NSC-46406; 3-chloropropyl n,n-bis(2-chloroethyl)-n'-(3-hydroxypropyl)phosphorodiamidate; LS-107974; 3-[[bis(2-chloroethyl)amino-(3-chloropropoxy)phosphoryl]amin; 3-[[bis(2-chloroethyl)amino-(3-chloropropoxy)phosphoryl]amino]propan-1-ol; Phosphorodiamidic acid,N-bis(2-chloroethyl)-N'-(3-hydroxypropyl)-, 3-chloropropyl ester
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| NC-6004 | Phase 2 | [4] | ||
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| ALT-803 | Phase 2 | [4] | ||
| Synonyms |
IL-15 agonist/ IL-15R alpha-Fc fusion complex (cancer), Altor BioScience
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| Vesigenurtacel-L | Phase 2 | [21] | ||
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| BAY1163877 | Phase 2 | [22] | ||
| Synonyms |
Rogaratinib
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| Coxsackievirus A21 | Phase 1/2 | [11] | ||
| Synonyms |
Cavatak (TN)
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| OGX-427 | Phase 2 | [23] | ||
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| PIRITREXIM | Phase 2 | [24] | ||
| Synonyms |
72732-56-0; Piritrexim [INN]; Piritreximum [Latin]; Piritrexime [French]; 6-(2,5-dimethoxybenzyl)-5-methylpyrido[2,3-d]pyrimidine-2,4-diamine; Piritrexima [Spanish]; BW 301U; UNII-MK2A783ZUT; BW-301U; TCMDC-137235; BRN 5768301; MK2A783ZUT; CHEMBL7492; 2,4-Diamino-5-methyl-6-(2,5-dimethoxybenzyl)pyrido(2,3-d)pyrimidine; 6-(2,5-DIMETHOXY-BENZYL)-5-METHYL-PYRIDO[2,3-D]PYRIMIDINE-2,4-DIAMINE; 6-((2,5-Dimethoxyphenyl)methyl)-5-methylpyrido(2,3-d)pyrimidine-2,4-diamine
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| VesiGel | Phase 2 | [4] | ||
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| Instiladrin | Phase 2 | [25] | ||
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| CDX-1307 | Phase 2 | [26] | ||
| Synonyms |
BHCG-VAC; BetaHCG-VAC; MDX-1307; Dendritic cell targeted hCG-beta vaccine, Medarex; B11-hCG-beta, Medarex; Antigen-presenting cell-targeted vaccine (injectable, cancer), Celldex Therapeutics; Antigen-presenting cell-targeted vaccine (intradermal, cancer), Celldex Therapeutics; Antigen-presenting cell-targeted vaccine (iv, cancer), Celldex Therapeutics
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| APR-246 | Phase 2 | [27] | ||
| Synonyms |
Eprenetapopt
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| MV-NIS | Phase 1 | [4] | ||
| Synonyms |
MV-NIS (intratumoral, SCCHN); Measles virus encoding thyroidal sodium iodide symporter (intratumoral, Head and neck tumor), Nisco International Inc; MV-NIS (intratumoral, SCCHN), Nisco International Inc
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| 4SCAR-PSMA | Phase 1/2 | [28] | ||
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| MAGE-A10 TCR | Phase 1/2 | [4] | ||
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| Lx-TB-PstS1 | Phase 1/2 | [29] | ||
| Synonyms |
Lx-Bladder
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| 4SCAR-FRa | Phase 1/2 | [28] | ||
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| ABY-025 | Phase 1/2 | [30] | ||
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| ADP-A2M10 | Phase 1 | [31] | ||
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| TAR-200 | Phase 1 | [4] | ||
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| ASG-15ME | Phase 1 | [32] | ||
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| Vesimune | Phase 2 | [33] | ||
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| NEO-PV-01 | Phase 1 | [4] | ||
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| Neo-Urinary Conduit | Phase 1 | [34] | ||
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| FPA144 | Phase 1 | [11] | ||
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| Ad-IFN-alpha | Phase 1 | [35] | ||
| Synonyms |
Ad-IFN-alpha (cancer); Ad-IFN-alpha (cancer), MD Anderson Cancer Center/NCI; Adenoviral-mediated IFN-alpha (gene therapy, cancer), MD Anderson Cancer Center/NCI
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| LNK-754 | Phase 1 | [36] | ||
| Synonyms |
LNK 754; 439153-64-7; OSI 754; CP 609754; CP-609,754; DTXSID60195986; 2(1H)-Quinolinone, 6-((4-chlorophenyl)hydroxy(1-methyl-1H-imidazol-5-yl)methyl)-4-(3-ethynylphenyl)-1-methyl-
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| example 7 [US8664233] | Clinical trial | [37] | ||
| Synonyms |
SCHEMBL977927; GTPL8283; HFGHRUCCKVYFKL-UHFFFAOYSA-N; SB19793; 4-ethoxy-2-(piperazin-1-yl)-7-(pyridin-4-yl)-5H-pyrimido[5,4-b]indole; 4-ethoxy-2-piperazin-1-yl-7-pyridin-4-yl-5H-pyrimido[5,4-b]indole
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| (S)-DRF-1042 | Clinical trial | [38] | ||
| Synonyms |
5(S)-(2'-hydroxyethoxy)-20(S)-camptothecin; 5(S)-(2'-hydroxyethoxy)-20(S)-CPT
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| Larotaxel | Discontinued in Phase 3 | [39] | ||
| Synonyms |
Benzenepropanoic acid; PNU 100940; XRP 9881; XRP9881
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| Keyhole limpet hemocyanin | Discontinued in Phase 3 | [40] | ||
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| IDM-2 | Discontinued in Phase 2/3 | [41] | ||
| Synonyms |
Bexidem; MAK anticancer agents (2), Immuno-Designed Molecules/IDM Pharma
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| NKS-01 | Discontinued in Phase 2 | [42] | ||
| Synonyms |
14alpha-Hydroxy-4-androstene-3,6,17-trione
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| S-288310 | Discontinued in Phase 1/2 | [43] | ||
| Synonyms |
Peptide vaccine (bladder cancer), OncoTherapy Science; Peptide vaccine (bladder cancer), Shionogi
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| Capzola | Application submitted | [4] | ||
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| MINAMESTANE | Terminated | [44] | ||
| Synonyms |
FCE-24928; 4-Aminoandrosta-1,4,6-triene-3,17-dione
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| CG-8840 | Terminated | [45] | ||
| Synonyms |
CV-884
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| ET-009 | Investigative | [46] | ||
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| TD-6989 | Investigative | [46] | ||
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| SL-601 | Investigative | [46] | ||
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| ASC-JMZ1 | Investigative | [46] | ||
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| TD-3633 | Investigative | [46] | ||
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| CEL-011 | Investigative | [46] | ||
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| Debio-1141 | Investigative | [46] | ||
| Synonyms |
PLK-1 targeting UsiRNA (liposomal, cancer), Marina; PLK1-targeting UsiRNA (liposomal, cancer), MDRNA; PLK-1 targeting UsiRNA (liposomal, bladder cancer), Marina/Debiopharm
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| TD-1770 | Investigative | [46] | ||
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| Chitosan/IL-12 | Investigative | [46] | ||
| Synonyms |
Chitosan/IL-12 immunotherapy (intravesical, cancer), National Cancer Institute
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| BAMLET | Investigative | [46] | ||
| Synonyms |
BAMLET (liquid formulation, bladder cancer); BAMLET instillation (bladder cancer), NatImmune; BAMLET (liquid formulation, bladder cancer), NatImmune; Bovine alpha-lactalbumin-lipid complex (liquid formulation, bladder cancer), NatImmune
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| TMX-202 | Investigative | [47] | ||
| Synonyms |
TMX-20X
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| SX-MTR1 | Investigative | [48] | ||
| Synonyms |
MTOR modulators (small peptide mimetics, bladder cancer), Serometrix
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| AP-300 | Investigative | [46] | ||
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| BC-821 | Investigative | [46] | ||
| Synonyms |
IGF2-DTA; Diphtheria toxin A conjugated insulin-like growth factor 2 (cancer), BioCancell
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| OGX-427 + Paclitaxel | Investigative | [49] | ||
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References
: m6A sites