m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR01734)
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: YTH domain-containing family protein 1 (YTHDF1)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT05191 | ||
| Epigenetic Regulator | hsa-miR-381 | |
| Regulated Target | YTH domain-containing family protein 1 (YTHDF1) | |
| Crosstalk relationship | ncRNA → m6A | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01734)
| In total 24 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE008688 | Click to Show/Hide the Full List | ||
| mod site | chr11:112143274-112143275:- | [2] | |
| Sequence | AAAATAAAATAAATAAATAAACAAATAAAAAATTCATAATG | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | A549 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000280357.12; ENST00000525547.5; ENST00000524595.5; rmsk_3659225 | ||
| External Link | RMBase: m6A_site_163816 | ||
| mod ID: M6ASITE008689 | Click to Show/Hide the Full List | ||
| mod site | chr11:112143306-112143307:- | [2] | |
| Sequence | GCCTGGGCAACAACAGCAAAACTCCATCTCAAAAAATAAAA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | A549 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000524595.5; ENST00000280357.12; rmsk_3659225; ENST00000525547.5 | ||
| External Link | RMBase: m6A_site_163817 | ||
| mod ID: M6ASITE008690 | Click to Show/Hide the Full List | ||
| mod site | chr11:112143599-112143600:- | [3] | |
| Sequence | GTTCACTGTTCAAAACGAAGACTAGCTATTAAAATTTCATG | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; A549; Huh7; HEC-1-A | ||
| Seq Type List | m6A-seq; m6A-CLIP/IP; MeRIP-seq | ||
| Transcript ID List | ENST00000525547.5; ENST00000524595.5; ENST00000528832.1; ENST00000280357.12 | ||
| External Link | RMBase: m6A_site_163818 | ||
| mod ID: M6ASITE008691 | Click to Show/Hide the Full List | ||
| mod site | chr11:112143664-112143665:- | [3] | |
| Sequence | AAAGAGAGAGACCTTTTTAAACTCATTTTGAAAAAAGAGGA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; A549; Huh7; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000528832.1; ENST00000280357.12; ENST00000525547.5; ENST00000524595.5 | ||
| External Link | RMBase: m6A_site_163819 | ||
| mod ID: M6ASITE008692 | Click to Show/Hide the Full List | ||
| mod site | chr11:112143674-112143675:- | [3] | |
| Sequence | AGCTTGTGAAAAAGAGAGAGACCTTTTTAAACTCATTTTGA | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; A549; Huh7; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000528832.1; ENST00000524595.5; ENST00000525547.5; ENST00000280357.12 | ||
| External Link | RMBase: m6A_site_163820 | ||
| mod ID: M6ASITE008693 | Click to Show/Hide the Full List | ||
| mod site | chr11:112143745-112143746:- | [3] | |
| Sequence | TTTCAGAGAAGTGTCCCAGGACATGATAATAAGATGCAATT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000525547.5; ENST00000524595.5; ENST00000533858.5; ENST00000280357.12; ENST00000528832.1 | ||
| External Link | RMBase: m6A_site_163821 | ||
| mod ID: M6ASITE008694 | Click to Show/Hide the Full List | ||
| mod site | chr11:112148621-112148622:- | [3] | |
| Sequence | TTCAACTCTCTCCTGTGAGAACAAAATTATTTCCTTTAAGG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000528832.1; ENST00000525547.5; ENST00000280357.12; ENST00000533858.5; ENST00000524595.5 | ||
| External Link | RMBase: m6A_site_163822 | ||
| mod ID: M6ASITE008695 | Click to Show/Hide the Full List | ||
| mod site | chr11:112148721-112148722:- | [3] | |
| Sequence | TTTCAGATAATGCACCCCGGACCATATTTATTATAAGTATG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000533858.5; ENST00000525547.5; ENST00000280357.12; ENST00000528832.1; ENST00000524595.5 | ||
| External Link | RMBase: m6A_site_163823 | ||
| mod ID: M6ASITE008696 | Click to Show/Hide the Full List | ||
| mod site | chr11:112150202-112150203:- | [3] | |
| Sequence | TTTAATGTTTATTGTAGAAAACCTGGAATCAGATTACTTTG | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000524595.5; ENST00000280357.12; ENST00000525547.5; ENST00000533858.5; ENST00000528832.1 | ||
| External Link | RMBase: m6A_site_163824 | ||
| mod ID: M6ASITE008697 | Click to Show/Hide the Full List | ||
| mod site | chr11:112150447-112150448:- | [4] | |
| Sequence | GAAAACTAGAAGGGTAAGAGACCGGTCAGAAAGTAGGCTAT | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000533858.5; ENST00000528832.1; ENST00000524595.5; ENST00000280357.12; ENST00000525547.5 | ||
| External Link | RMBase: m6A_site_163825 | ||
| mod ID: M6ASITE008698 | Click to Show/Hide the Full List | ||
| mod site | chr11:112150463-112150464:- | [3] | |
| Sequence | TGGAGTAAAAGTGTAAGAAAACTAGAAGGGTAAGAGACCGG | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000533858.5; ENST00000524595.5; ENST00000528832.1; ENST00000280357.12; ENST00000525547.5 | ||
| External Link | RMBase: m6A_site_163826 | ||
| mod ID: M6ASITE008699 | Click to Show/Hide the Full List | ||
| mod site | chr11:112150494-112150495:- | [3] | |
| Sequence | AGATGTTGTGAAATTTAAGAACACATAGAGTTGGAGTAAAA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000533858.5; ENST00000528832.1; ENST00000525547.5; ENST00000280357.12; ENST00000524595.5 | ||
| External Link | RMBase: m6A_site_163827 | ||
| mod ID: M6ASITE008700 | Click to Show/Hide the Full List | ||
| mod site | chr11:112150520-112150521:- | [3] | |
| Sequence | GGAAATACAAGAGTCAGGAGACTGGAAGATGTTGTGAAATT | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000528832.1; ENST00000533858.5; ENST00000525547.5; ENST00000280357.12; ENST00000524595.5 | ||
| External Link | RMBase: m6A_site_163828 | ||
| mod ID: M6ASITE008701 | Click to Show/Hide the Full List | ||
| mod site | chr11:112150594-112150595:- | [4] | |
| Sequence | CAAAATGGTAGACAAAATGAACTCTGAGATCCAGCTGCACA | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000280357.12; ENST00000525547.5; ENST00000533858.5; ENST00000528832.1; ENST00000524595.5 | ||
| External Link | RMBase: m6A_site_163829 | ||
| mod ID: M6ASITE008702 | Click to Show/Hide the Full List | ||
| mod site | chr11:112150603-112150604:- | [4] | |
| Sequence | ATATCCTGGCAAAATGGTAGACAAAATGAACTCTGAGATCC | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000280357.12; ENST00000524595.5; ENST00000533858.5; ENST00000525547.5; ENST00000528832.1 | ||
| External Link | RMBase: m6A_site_163830 | ||
| mod ID: M6ASITE008703 | Click to Show/Hide the Full List | ||
| mod site | chr11:112150643-112150644:- | [4] | |
| Sequence | TGGAGTTTTGTAGCAGAAAGACAAATAAGTTAGGGATTTAA | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000524595.5; ENST00000525547.5; ENST00000533858.5; ENST00000528832.1; ENST00000280357.12 | ||
| External Link | RMBase: m6A_site_163831 | ||
| mod ID: M6ASITE008704 | Click to Show/Hide the Full List | ||
| mod site | chr11:112150754-112150755:- | [3] | |
| Sequence | AGAGAGTGCTGAACTGGAAAACAAAAGAAGTATTGACAATT | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000280357.12; ENST00000525547.5; ENST00000533858.5; ENST00000524595.5; ENST00000528832.1 | ||
| External Link | RMBase: m6A_site_163832 | ||
| mod ID: M6ASITE008705 | Click to Show/Hide the Full List | ||
| mod site | chr11:112150762-112150763:- | [3] | |
| Sequence | GCTATGGAAGAGAGTGCTGAACTGGAAAACAAAAGAAGTAT | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000524595.5; ENST00000533858.5; ENST00000528832.1; ENST00000280357.12; ENST00000525547.5 | ||
| External Link | RMBase: m6A_site_163833 | ||
| mod ID: M6ASITE008706 | Click to Show/Hide the Full List | ||
| mod site | chr11:112153086-112153087:- | [3] | |
| Sequence | GAGGCCAAAAGCTGAAAGAAACCATGGCATTTATGATGAAT | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000534225.1; ENST00000533858.5; ENST00000528832.1; ENST00000280357.12; ENST00000524595.5 | ||
| External Link | RMBase: m6A_site_163834 | ||
| mod ID: M6ASITE008707 | Click to Show/Hide the Full List | ||
| mod site | chr11:112153116-112153117:- | [3] | |
| Sequence | GGAATGGGTGGGGCAAGAAGACCACATTCAGAGGCCAAAAG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000533858.5; ENST00000528832.1; ENST00000534225.1; ENST00000524595.5; ENST00000280357.12 | ||
| External Link | RMBase: m6A_site_163835 | ||
| mod ID: M6ASITE008708 | Click to Show/Hide the Full List | ||
| mod site | chr11:112153341-112153342:- | [4] | |
| Sequence | TCTTAGAATCTACAAAATAGACTTTGCCTGTTTCATAGGTC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000524595.5; ENST00000533858.5; ENST00000534225.1; ENST00000280357.12; ENST00000528832.1 | ||
| External Link | RMBase: m6A_site_163836 | ||
| mod ID: M6ASITE008709 | Click to Show/Hide the Full List | ||
| mod site | chr11:112153407-112153408:- | [3] | |
| Sequence | CATAAGAGATACAAAGAAGAACCTCTAGCAAAAGATGCTTC | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000534225.1; ENST00000524595.5; ENST00000533858.5; ENST00000528832.1; ENST00000280357.12 | ||
| External Link | RMBase: m6A_site_163837 | ||
| mod ID: M6ASITE008710 | Click to Show/Hide the Full List | ||
| mod site | chr11:112153459-112153460:- | [3] | |
| Sequence | CTGCCTTCAAAGAAATGTGGACTCAGTAGCACAGCTTTGGA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000533858.5; ENST00000280357.12; ENST00000534225.1; ENST00000524595.5; ENST00000528832.1 | ||
| External Link | RMBase: m6A_site_163838 | ||
| mod ID: M6ASITE008711 | Click to Show/Hide the Full List | ||
| mod site | chr11:112153539-112153540:- | [3] | |
| Sequence | AAACTAAGTATCTGCTTGAGACACATCTATCTCACCATTGT | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000280357.12; ENST00000534225.1; ENST00000528832.1; ENST00000533858.5; ENST00000524595.5 | ||
| External Link | RMBase: m6A_site_163839 | ||
References