m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR01615)
Target Name long intergenic non-protein coding RNA 115 (LINC00115)
Synonyms
FLJ22639; NCRNA00115; non-protein coding RNA 115
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Gene Name LINC00115
Chromosomal Location 1p36.33
Gene ID 79854
HGNC ID
HGNC:26211
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: RNA demethylase ALKBH5 (ALKBH5)
 Regulator Info 
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03104
 Crosstalk Info 
Epigenetic Regulator Histone-lysine N-methyltransferase SETDB1 (SETDB1)
Regulated Target Polo like kinase 3 (PLK3)
Crosstalk relationship Histone modification → m6A
Disease Triple-negative breast cancer
 Disease Info 
Drug Acetaminophen
 Drug Info 
m6A Regulator: YTH domain-containing family protein 2 (YTHDF2)
 Regulator Info 
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03105
 Crosstalk Info 
Epigenetic Regulator Histone-lysine N-methyltransferase SETDB1 (SETDB1)
Regulated Target Polo like kinase 3 (PLK3)
Crosstalk relationship Histone modification → m6A
Disease Triple-negative breast cancer
 Disease Info 
Drug Acetaminophen
 Drug Info 
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01615)
long intergenic non-protein coding RNA 115 (LINC00115)
N6-methyladenosine (m6A)
In total 10 m6A sequence/site(s) in this target gene
mod ID: M6ASITE008768 Click to Show/Hide the Full List
mod site chr1:826650-826651:- [2]
Sequence AATCAGCAGAGATATGGAGGACAGAATACAATGAGGAGGCC
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000635509.2; ENST00000473798.1; ENST00000634337.2
External Link RMBase: m6A_site_165
mod ID: M6ASITE009130 Click to Show/Hide the Full List
mod site chr1:826680-826681:- [2]
Sequence AGTGGGGTAAATGGAAATAGACAAAATGGGAATCAGCAGAG
Motif Score 2.897386905
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000634337.2; ENST00000473798.1; ENST00000635509.2
External Link RMBase: m6A_site_166
mod ID: M6ASITE009403 Click to Show/Hide the Full List
mod site chr1:826741-826742:- [2]
Sequence GATGGGTCTGAGGAATTTGAACAAACACCGACAGTGAAGGA
Motif Score 2.951386905
Cell/Tissue List HeLa; Huh7; Jurkat; peripheral-blood; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000635509.2; ENST00000634337.2; ENST00000473798.1
External Link RMBase: m6A_site_167
mod ID: M6ASITE009450 Click to Show/Hide the Full List
mod site chr1:826824-826825:- [2]
Sequence GGCAGGAGAGTGAGGAGAAAACAGAGAGGAGGGAGGTAGAG
Motif Score 2.20572619
Cell/Tissue List HeLa; Jurkat; GSC-11; endometrial; GSCs
Seq Type List m6A-seq
Transcript ID List ENST00000634337.2; ENST00000473798.1; ENST00000635509.2
External Link RMBase: m6A_site_168
mod ID: M6ASITE009602 Click to Show/Hide the Full List
mod site chr1:826997-826998:- [2]
Sequence GTCCGAGACTGGGGTAGGGGACCTGCCCGATCCTGTAACAA
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000634337.2; ENST00000635509.2; ENST00000473798.1
External Link RMBase: m6A_site_170
mod ID: M6ASITE009742 Click to Show/Hide the Full List
mod site chr1:827010-827011:- [2]
Sequence GACAGGACCCTGAGTCCGAGACTGGGGTAGGGGACCTGCCC
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000634337.2; ENST00000635509.2; ENST00000473798.1
External Link RMBase: m6A_site_171
mod ID: M6ASITE009958 Click to Show/Hide the Full List
mod site chr1:827024-827025:- [2]
Sequence GGGTGGCCGCCTCAGACAGGACCCTGAGTCCGAGACTGGGG
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000635509.2; ENST00000473798.1; ENST00000634337.2
External Link RMBase: m6A_site_172
mod ID: M6ASITE010084 Click to Show/Hide the Full List
mod site chr1:827029-827030:- [2]
Sequence CTTCGGGGTGGCCGCCTCAGACAGGACCCTGAGTCCGAGAC
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000635509.2; ENST00000473798.1; ENST00000634337.2
External Link RMBase: m6A_site_173
mod ID: M6ASITE010296 Click to Show/Hide the Full List
mod site chr1:827057-827058:- [2]
Sequence CAGGCCCTACGTCTCCGCAAACCCCACGCTTCGGGGTGGCC
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000473798.1; ENST00000634337.2; ENST00000635509.2
External Link RMBase: m6A_site_174
mod ID: M6ASITE010513 Click to Show/Hide the Full List
mod site chr1:827454-827455:- [2]
Sequence CCTCCGCTTTTTGTGGCCAAACCCAGCCACGCAGTCCCCTC
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000635509.2; ENST00000634337.2; ENST00000473798.1
External Link RMBase: m6A_site_175