m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR01332)
Target Name Large ribosomal subunit protein bL12m (MRPL12)
Synonyms
39S ribosomal protein L12, mitochondrial; L12mt; MRP-L12; 5c5-2
    Click to Show/Hide
Gene Name MRPL12
Chromosomal Location 17q25.3
Family Bacterial ribosomal protein bL12 family
Function
As a component of the mitochondrial large ribosomal subunit, it plays a role in mitochondrial translation (PubMed:23603806). Associates with mitochondrial RNA polymerase to activate transcription.
    Click to Show/Hide
Gene ID 6182
Uniprot ID
RM12_HUMAN
HGNC ID
HGNC:10378
KEGG ID
hsa:6182
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01332)
Large ribosomal subunit protein bL12m (MRPL12)
Adenosine-to-Inosine editing (A-to-I)
In total 1 m6A sequence/site(s) in this target gene
mod ID: A2ISITE008559 Click to Show/Hide the Full List
mod site chr17:81706287-81706288:+ [2]
Sequence TATTTATGAAACCGAGTCTCACTCTGTCACCCAGGCTGGAG
Transcript ID List ENST00000333676.8; ENST00000571730.1
External Link RMBase: RNA-editing_site_61859
5-methylcytidine (m5C)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE001364 Click to Show/Hide the Full List
mod site chr17:81704381-81704382:+ [3]
Sequence CAGCAGCTGGTCCAGGACATCGCCAGCCTCACTCTCTTGGA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000333676.8; ENST00000571730.1
External Link RMBase: m5C_site_20477
N6-methyladenosine (m6A)
In total 13 m6A sequence/site(s) in this target gene
mod ID: M6ASITE036013 Click to Show/Hide the Full List
mod site chr17:81703471-81703472:+ [4]
Sequence GCGTCGCCTCCTCCCGGGGAACCGCGTGTGACCTTCCAGCC
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000333676.8; ENST00000571730.1
External Link RMBase: m6A_site_389015
mod ID: M6ASITE036014 Click to Show/Hide the Full List
mod site chr17:81703497-81703498:+ [4]
Sequence TGTGACCTTCCAGCCCGCGGACCGATGCTGCCGGCGGCCGC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000333676.8; ENST00000571730.1
External Link RMBase: m6A_site_389016
mod ID: M6ASITE036015 Click to Show/Hide the Full List
mod site chr17:81704377-81704378:+ [4]
Sequence GATACAGCAGCTGGTCCAGGACATCGCCAGCCTCACTCTCT
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293; A549; MT4; MM6; peripheral-blood; HEK293T; iSLK; endometrial; NB4
Seq Type List m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List ENST00000571730.1; ENST00000333676.8
External Link RMBase: m6A_site_389017
mod ID: M6ASITE036016 Click to Show/Hide the Full List
mod site chr17:81704410-81704411:+ [4]
Sequence CACTCTCTTGGAAATCTCAGACCTCAACGAGCTCCTGAAGG
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; MT4; A549; MM6; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000571730.1; ENST00000333676.8
External Link RMBase: m6A_site_389018
mod ID: M6ASITE036017 Click to Show/Hide the Full List
mod site chr17:81706941-81706942:+ [4]
Sequence TCCCCATAGCGAAAGAACGGACACATTTCACCGTCCGCCTG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; A549; H1299; MM6; Huh7; CD4T; peripheral-blood; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000571730.1; ENST00000333676.8
External Link RMBase: m6A_site_389019
mod ID: M6ASITE036018 Click to Show/Hide the Full List
mod site chr17:81706962-81706963:+ [5]
Sequence CACATTTCACCGTCCGCCTGACCGAGGCGAAGCCCGTGGAC
Motif Score 2.839113095
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000333676.8; ENST00000571730.1
External Link RMBase: m6A_site_389020
mod ID: M6ASITE036019 Click to Show/Hide the Full List
mod site chr17:81706981-81706982:+ [4]
Sequence GACCGAGGCGAAGCCCGTGGACAAAGTGAAGCTGATCAAGG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; hNPCs; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000333676.8; ENST00000571730.1
External Link RMBase: m6A_site_389021
mod ID: M6ASITE036020 Click to Show/Hide the Full List
mod site chr17:81707011-81707012:+ [4]
Sequence GCTGATCAAGGAAATCAAGAACTACATCCAAGGCATCAACC
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; U2OS; hNPCs; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000571730.1; ENST00000333676.8
External Link RMBase: m6A_site_389022
mod ID: M6ASITE036021 Click to Show/Hide the Full List
mod site chr17:81707255-81707256:+ [4]
Sequence AGTAGCCTCCAGCTCGGAGGACTTGTGTTCAGGGGTCCTGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000571730.1; ENST00000333676.8
External Link RMBase: m6A_site_389023
mod ID: M6ASITE036022 Click to Show/Hide the Full List
mod site chr17:81707382-81707383:+ [4]
Sequence GCGCCACGCAGCGGGGCCGGACAGGCCGCACAGACCTACTG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; DART-seq; miCLIP
Transcript ID List ENST00000333676.8; ENST00000571730.1
External Link RMBase: m6A_site_389024
mod ID: M6ASITE036023 Click to Show/Hide the Full List
mod site chr17:81707395-81707396:+ [4]
Sequence GGGCCGGACAGGCCGCACAGACCTACTGTGGCGGGAGGGAG
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000333676.8; ENST00000571730.1
External Link RMBase: m6A_site_389025
mod ID: M6ASITE036024 Click to Show/Hide the Full List
mod site chr17:81707399-81707400:+ [6]
Sequence CGGACAGGCCGCACAGACCTACTGTGGCGGGAGGGAGGGGC
Motif Score 2.500660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000571730.1; ENST00000333676.8
External Link RMBase: m6A_site_389026
mod ID: M6ASITE036025 Click to Show/Hide the Full List
mod site chr17:81707435-81707436:+ [6]
Sequence GGGGCGGCTGCTGCCTGGTGACGGCACCCGGAGGCCCACCA
Motif Score 2.833690476
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000571730.1; ENST00000333676.8
External Link RMBase: m6A_site_389027
2'-O-Methylation (2'-O-Me)
In total 1 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000169 Click to Show/Hide the Full List
mod site chr17:81704639-81704640:+ [7]
Sequence TCTATCTCTGCAGAAAACGTTGAAGATCCAGGATGTCGGGC
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000571730.1; ENST00000333676.8
External Link RMBase: Nm_site_2592