m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR01329)

Target Name	Interferon regulatory factor 4 (IRF4)
Synonyms	IRF-4; Lymphocyte-specific interferon regulatory factor; LSIRF; Multiple myeloma oncogene 1; NF-EM5 Click to Show/Hide
Gene Name	IRF4
Chromosomal Location	6p25.3
Family	IRF family
Function	Transcriptional activator. Binds to the interferon-stimulated response element (ISRE) of the MHC class I promoter. Binds the immunoglobulin lambda light chain enhancer, together with PU.1. Probably plays a role in ISRE-targeted signal transduction mechanisms specific to lymphoid cells. Involved in CD8(+) dendritic cell differentiation by forming a complex with the BATF-JUNB heterodimer in immune cells, leading to recognition of AICE sequence (5'-TGAnTCA/GAAA-3'), an immune-specific regulatory element, followed by cooperative binding of BATF and IRF4 and activation of genes (By similarity). Click to Show/Hide
Gene ID	3662
Uniprot ID	IRF4_HUMAN
HGNC ID	HGNC:6119
KEGG ID	hsa:3662

RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01329)

Interferon regulatory factor 4 (IRF4)

Adenosine-to-Inosine editing (A-to-I)

In total 1 m6A sequence/site(s) in this target gene
mod ID: A2ISITE001333		Click to Show/Hide the Full List
mod site	chr6:400715-400716:+		[2]
Sequence	GCTTACCCTTTAATGTGTGTATGTGAGTGTGTTTATATATA
Transcript ID List	ENST00000380956.9; ENST00000493114.1
External Link	RMBase: RNA-editing_site_114261

N6-methyladenosine (m6A)

In total 57 m6A sequence/site(s) in this target gene
mod ID: M6ASITE073120		Click to Show/Hide the Full List
mod site	chr6:391773-391774:+		[3]
Sequence	TTTCACCGCTCGATCTTGGGACCCACCGCTGCCCTCAGCTC
Motif Score	3.622404762
Cell/Tissue List	LCLs; MT4; CD4T; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000468485.5; ENST00000495137.5; ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702901
mod ID: M6ASITE073121		Click to Show/Hide the Full List
mod site	chr6:393119-393120:+		[3]
Sequence	CAGAGCAGAGCGGGCGGAGGACCCCGGGCGCGGGCGCGGAC
Motif Score	3.622404762
Cell/Tissue List	LCLs; MT4; CD4T; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000468485.5; ENST00000380956.9; ENST00000493114.1; ENST00000495137.5; rmsk_1850229
External Link	RMBase: m6A_site_702902
mod ID: M6ASITE073122		Click to Show/Hide the Full List
mod site	chr6:393156-393157:+		[3]
Sequence	GGACGGCACGCGGGGCATGAACCTGGAGGGCGGCGGCCGAG
Motif Score	2.930744048
Cell/Tissue List	LCLs; MT4; CD4T; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000468485.5; ENST00000495137.5; ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702903
mod ID: M6ASITE073123		Click to Show/Hide the Full List
mod site	chr6:393333-393334:+		[3]
Sequence	GAAGCACGCGGGCAAGCAGGACTACAACCGCGAGGAGGACG
Motif Score	4.065041667
Cell/Tissue List	LCLs; MT4; CD4T; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000468485.5; ENST00000380956.9; ENST00000493114.1; ENST00000495137.5; ENST00000469834.1
External Link	RMBase: m6A_site_702904
mod ID: M6ASITE073124		Click to Show/Hide the Full List
mod site	chr6:394869-394870:+		[3]
Sequence	AGAAGGCATCGACAAGCCGGACCCTCCCACCTGGAAGACGC
Motif Score	3.622404762
Cell/Tissue List	LCLs; MT4; CD4T; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000493114.1; ENST00000380956.9; ENST00000495137.5; ENST00000468485.5; ENST00000469834.1
External Link	RMBase: m6A_site_702905
mod ID: M6ASITE073125		Click to Show/Hide the Full List
mod site	chr6:394908-394909:+		[4]
Sequence	GCGCCTGCGGTGCGCTTTGAACAAGAGCAATGACTTTGAGG
Motif Score	2.951386905
Cell/Tissue List	MT4; CD4T; endometrial
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000495137.5; ENST00000493114.1; ENST00000469834.1; ENST00000380956.9; ENST00000468485.5
External Link	RMBase: m6A_site_702906
mod ID: M6ASITE073126		Click to Show/Hide the Full List
mod site	chr6:394930-394931:+		[4]
Sequence	AAGAGCAATGACTTTGAGGAACTGGTTGAGCGGAGCCAGCT
Motif Score	3.373380952
Cell/Tissue List	MT4; CD4T; endometrial
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000493114.1; ENST00000469834.1; ENST00000495137.5; ENST00000468485.5; ENST00000380956.9
External Link	RMBase: m6A_site_702907
mod ID: M6ASITE073127		Click to Show/Hide the Full List
mod site	chr6:394953-394954:+		[4]
Sequence	GGTTGAGCGGAGCCAGCTGGACATCTCAGACCCGTACAAAG
Motif Score	3.643047619
Cell/Tissue List	MT4; CD4T; endometrial
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000493114.1; ENST00000495137.5; ENST00000469834.1; ENST00000380956.9; ENST00000468485.5
External Link	RMBase: m6A_site_702908
mod ID: M6ASITE073128		Click to Show/Hide the Full List
mod site	chr6:394962-394963:+		[4]
Sequence	GAGCCAGCTGGACATCTCAGACCCGTACAAAGTGTACAGGA
Motif Score	2.876744048
Cell/Tissue List	MT4; CD4T; endometrial
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000469834.1; ENST00000468485.5; ENST00000495137.5; ENST00000493114.1; ENST00000380956.9
External Link	RMBase: m6A_site_702909
mod ID: M6ASITE073130		Click to Show/Hide the Full List
mod site	chr6:395870-395871:+		[4]
Sequence	CAAGCAGCTCACCCTGGAGGACCCGCAGATGTCCATGAGCC
Motif Score	3.622404762
Cell/Tissue List	MT4; CD4T
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000493114.1; ENST00000380956.9; ENST00000495137.5; ENST00000468485.5; ENST00000469834.1
External Link	RMBase: m6A_site_702910
mod ID: M6ASITE073131		Click to Show/Hide the Full List
mod site	chr6:396003-396004:+		[4]
Sequence	GCTGCCCACATGGCCAGAGAACCACAGCAGCCCAGACAGCA
Motif Score	2.930744048
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000495137.5; ENST00000468485.5; ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702911
mod ID: M6ASITE073132		Click to Show/Hide the Full List
mod site	chr6:396018-396019:+		[4]
Sequence	AGAGAACCACAGCAGCCCAGACAGCAGAACTTGCCATTTGC
Motif Score	2.897386905
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000493114.1; ENST00000468485.5; ENST00000495137.5
External Link	RMBase: m6A_site_702912
mod ID: M6ASITE073133		Click to Show/Hide the Full List
mod site	chr6:396026-396027:+		[4]
Sequence	ACAGCAGCCCAGACAGCAGAACTTGCCATTTGCTATGGCTG
Motif Score	3.373380952
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000493114.1; ENST00000495137.5; ENST00000380956.9; ENST00000468485.5
External Link	RMBase: m6A_site_702913
mod ID: M6ASITE073134		Click to Show/Hide the Full List
mod site	chr6:396065-396066:+		[4]
Sequence	TGCTCCAACAGCCCAGAAAAACCCCAGGTCACTGAACGAAT
Motif Score	2.185083333
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000495137.5; ENST00000493114.1; ENST00000468485.5
External Link	RMBase: m6A_site_702914
mod ID: M6ASITE073135		Click to Show/Hide the Full List
mod site	chr6:397153-397154:+		[4]
Sequence	CCTCGACCGAAGCTGGAGGGACTACGTCCCGGATCAGCCAC
Motif Score	4.065041667
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000493114.1; ENST00000380956.9; ENST00000495137.5
External Link	RMBase: m6A_site_702915
mod ID: M6ASITE073136		Click to Show/Hide the Full List
mod site	chr6:397211-397212:+		[4]
Sequence	CAATGTCCCATGACGTTTGGACCCCGCGGCCACCACTGGCA
Motif Score	3.622404762
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000493114.1; ENST00000495137.5; ENST00000380956.9
External Link	RMBase: m6A_site_702916
mod ID: M6ASITE073137		Click to Show/Hide the Full List
mod site	chr6:397485-397486:+		[4]
Sequence	CTTCGTGGGATCTTATTTAAACACCACAGAGATCACTCCAG
Motif Score	2.20572619
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000493114.1; ENST00000380956.9; ENST00000495137.5
External Link	RMBase: m6A_site_702917
mod ID: M6ASITE073138		Click to Show/Hide the Full List
mod site	chr6:397516-397517:+		[4]
Sequence	ATCACTCCAGGCAGTGGAAAACAGCCCCCCACTTTTTATAT
Motif Score	2.20572619
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000495137.5; ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702918
mod ID: M6ASITE073139		Click to Show/Hide the Full List
mod site	chr6:398844-398845:+		[4]
Sequence	CAGGTTGCCAGGTGACAGGAACCTTTTATGCTTGTGCCCCA
Motif Score	2.930744048
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000493114.1; ENST00000380956.9
External Link	RMBase: m6A_site_702919
mod ID: M6ASITE073141		Click to Show/Hide the Full List
mod site	chr6:401514-401515:+		[5]
Sequence	GGCTGCCGGATCTCCCATGGACATACGTATGACGCCAGCAA
Motif Score	3.643047619
Cell/Tissue List	CD4T; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702920
mod ID: M6ASITE073142		Click to Show/Hide the Full List
mod site	chr6:401540-401541:+		[3]
Sequence	GTATGACGCCAGCAACCTGGACCAGGTCCTGTTCCCCTACC
Motif Score	3.622404762
Cell/Tissue List	LCLs; CD4T; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702921
mod ID: M6ASITE073143		Click to Show/Hide the Full List
mod site	chr6:401567-401568:+		[3]
Sequence	CCTGTTCCCCTACCCAGAGGACAATGGCCAGAGGAAAAACA
Motif Score	3.643047619
Cell/Tissue List	LCLs; CD4T; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702922
mod ID: M6ASITE073144		Click to Show/Hide the Full List
mod site	chr6:401585-401586:+		[3]
Sequence	GGACAATGGCCAGAGGAAAAACATTGAGAAGCTGCTGAGCC
Motif Score	2.20572619
Cell/Tissue List	LCLs; CD4T; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000493114.1; ENST00000380956.9
External Link	RMBase: m6A_site_702923
mod ID: M6ASITE073145		Click to Show/Hide the Full List
mod site	chr6:401661-401662:+		[3]
Sequence	GACGGGCTCTATGCGAAAAGACTGTGCCAGAGCAGGATCTA
Motif Score	3.319380952
Cell/Tissue List	LCLs; CD8T; CD4T; TREX; endometrial
Seq Type List	m6A-seq; m6A-CLIP/IP; MeRIP-seq
Transcript ID List	ENST00000493114.1; ENST00000380956.9
External Link	RMBase: m6A_site_702924
mod ID: M6ASITE073146		Click to Show/Hide the Full List
mod site	chr6:401724-401725:+		[3]
Sequence	TGCAACGACCGGCCCAACAAACTGGAGAGAGACCAGACCTG
Motif Score	2.627720238
Cell/Tissue List	LCLs; CD4T; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702925
mod ID: M6ASITE073147		Click to Show/Hide the Full List
mod site	chr6:401735-401736:+		[3]
Sequence	GCCCAACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTG
Motif Score	2.876744048
Cell/Tissue List	LCLs; CD4T; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000493114.1; ENST00000380956.9
External Link	RMBase: m6A_site_702926
mod ID: M6ASITE073148		Click to Show/Hide the Full List
mod site	chr6:401740-401741:+		[3]
Sequence	ACAAACTGGAGAGAGACCAGACCTGCAAGCTCTTTGACACA
Motif Score	2.876744048
Cell/Tissue List	LCLs; CD4T; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702927
mod ID: M6ASITE073149		Click to Show/Hide the Full List
mod site	chr6:405095-405096:+		[5]
Sequence	CTTTGGAGAGGAGTTTCCAGACCCTCAGAGGCAAAGAAAGC
Motif Score	2.876744048
Cell/Tissue List	CD4T; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702928
mod ID: M6ASITE073150		Click to Show/Hide the Full List
mod site	chr6:406875-406876:+		[6]
Sequence	GTAAATTCAGGAAAAGCTGAACATTAAGGCGTTTTTGTTTT
Motif Score	2.951386905
Cell/Tissue List	GM12878; MT4; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702929
mod ID: M6ASITE073152		Click to Show/Hide the Full List
mod site	chr6:407459-407460:+		[6]
Sequence	AATCTCTTATTAAAGGTAGAACCTCTGCTAGCCAGACAACT
Motif Score	2.930744048
Cell/Tissue List	GM12878; LCLs; MT4; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702930
mod ID: M6ASITE073153		Click to Show/Hide the Full List
mod site	chr6:407474-407475:+		[6]
Sequence	GTAGAACCTCTGCTAGCCAGACAACTATATTATTTTGCTCA
Motif Score	2.897386905
Cell/Tissue List	GM12878; LCLs; MT4; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000493114.1; ENST00000380956.9
External Link	RMBase: m6A_site_702931
mod ID: M6ASITE073154		Click to Show/Hide the Full List
mod site	chr6:407500-407501:+		[6]
Sequence	ATATTATTTTGCTCAACAAAACAGTGGACATTTCCTGAGGG
Motif Score	2.20572619
Cell/Tissue List	GM12878; LCLs; MT4; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702932
mod ID: M6ASITE073155		Click to Show/Hide the Full List
mod site	chr6:407507-407508:+		[7]
Sequence	TTTGCTCAACAAAACAGTGGACATTTCCTGAGGGGCTACGA
Motif Score	3.643047619
Cell/Tissue List	hESC-HEK293T; GM12878; LCLs; CD8T; MT4; TREX
Seq Type List	MAZTER-seq; m6A-seq; m6A-CLIP/IP; MeRIP-seq
Transcript ID List	ENST00000380956.9; ENST00000493114.1
External Link	RMBase: m6A_site_702933
mod ID: M6ASITE073156		Click to Show/Hide the Full List
mod site	chr6:407537-407538:+		[6]
Sequence	AGGGGCTACGATTTACCAGAACACATCAGCAATCCAGAAGA
Motif Score	2.951386905
Cell/Tissue List	GM12878; LCLs; MT4; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000493114.1; ENST00000380956.9
External Link	RMBase: m6A_site_702934
mod ID: M6ASITE073157		Click to Show/Hide the Full List
mod site	chr6:407742-407743:+		[6]
Sequence	CCGCCTCCTGGGTTCAAGAGACTCTCCTGCCTCAGCCTCCC
Motif Score	3.319380952
Cell/Tissue List	GM12878; LCLs; CD4T; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702935
mod ID: M6ASITE073158		Click to Show/Hide the Full List
mod site	chr6:407806-407807:+		[6]
Sequence	AGCCACTGCACCCACCCAAGACAAGTGATTTTCATTGTAAA
Motif Score	2.897386905
Cell/Tissue List	GM12878; LCLs; CD4T; HEK293A-TOA; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702936
mod ID: M6ASITE073159		Click to Show/Hide the Full List
mod site	chr6:407856-407857:+		[8]
Sequence	TTAGTGAAAGCGTCCAATTGACTGCCCTCTTACTGTTTTGA
Motif Score	3.28175
Cell/Tissue List	CD8T
Seq Type List	m6A-CLIP/IP
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702937
mod ID: M6ASITE073160		Click to Show/Hide the Full List
mod site	chr6:407929-407930:+		[9]
Sequence	TTGAGGAGAATTGCGGCGAGACAAGCATGGAAAATCAGTGA
Motif Score	2.897386905
Cell/Tissue List	H1A; GM12878; LCLs; CD4T; HEK293A-TOA; iSLK; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702938
mod ID: M6ASITE073161		Click to Show/Hide the Full List
mod site	chr6:408015-408016:+		[6]
Sequence	GCATTTCTTGTGTTCTGTAGACTGCCATCATTGATGATCAC
Motif Score	3.319380952
Cell/Tissue List	GM12878; LCLs; CD8T; CD4T; TREX
Seq Type List	m6A-seq; m6A-CLIP/IP; MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702939
mod ID: M6ASITE073163		Click to Show/Hide the Full List
mod site	chr6:408116-408117:+		[6]
Sequence	AGATTAGGTCTTGCTGGAAGACAGAGAAAACTTGCCTTTCA
Motif Score	2.897386905
Cell/Tissue List	GM12878; LCLs; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702940
mod ID: M6ASITE073164		Click to Show/Hide the Full List
mod site	chr6:408125-408126:+		[6]
Sequence	CTTGCTGGAAGACAGAGAAAACTTGCCTTTCAGTATTGACA
Motif Score	2.627720238
Cell/Tissue List	GM12878; LCLs; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702941
mod ID: M6ASITE073165		Click to Show/Hide the Full List
mod site	chr6:408275-408276:+		[6]
Sequence	AGCTGCAGTTCTTGTGGAAGACACTTGCTGAGTGAAGGAAA
Motif Score	2.897386905
Cell/Tissue List	GM12878; LCLs; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702942
mod ID: M6ASITE073166		Click to Show/Hide the Full List
mod site	chr6:408439-408440:+		[6]
Sequence	TCCTGGAAGCCAGTTAGTAAACTTCCTATTTTCTTGAGTCA
Motif Score	2.627720238
Cell/Tissue List	GM12878
Seq Type List	m6A-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702943
mod ID: M6ASITE073167		Click to Show/Hide the Full List
mod site	chr6:408464-408465:+		[6]
Sequence	CTATTTTCTTGAGTCAAAAAACATGAGCGCTACTCTTGGAT
Motif Score	2.20572619
Cell/Tissue List	GM12878
Seq Type List	m6A-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702944
mod ID: M6ASITE073168		Click to Show/Hide the Full List
mod site	chr6:408488-408489:+		[6]
Sequence	GAGCGCTACTCTTGGATGGGACATTTTTGTCTGTCCTACAA
Motif Score	3.643047619
Cell/Tissue List	GM12878
Seq Type List	m6A-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702945
mod ID: M6ASITE073169		Click to Show/Hide the Full List
mod site	chr6:408616-408617:+		[6]
Sequence	AAAGAAGAAGAAATTAAGGAACATAAATCTTAATACTTGAA
Motif Score	2.951386905
Cell/Tissue List	GM12878
Seq Type List	m6A-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702946
mod ID: M6ASITE073170		Click to Show/Hide the Full List
mod site	chr6:408636-408637:+		[6]
Sequence	ACATAAATCTTAATACTTGAACTGTTGCCCTTCTGTCCAAG
Motif Score	3.373380952
Cell/Tissue List	GM12878
Seq Type List	m6A-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702947
mod ID: M6ASITE073171		Click to Show/Hide the Full List
mod site	chr6:408755-408756:+		[6]
Sequence	TAAAGGAGGAGGAGCCGGGGACTCCCAGGCTGGAGAGCACT
Motif Score	4.065041667
Cell/Tissue List	GM12878; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702948
mod ID: M6ASITE073172		Click to Show/Hide the Full List
mod site	chr6:408782-408783:+		[6]
Sequence	GGCTGGAGAGCACTGCCAGGACCCACCACTGGAAGCAGGAT
Motif Score	3.622404762
Cell/Tissue List	GM12878; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702949
mod ID: M6ASITE073174		Click to Show/Hide the Full List
mod site	chr6:408818-408819:+		[6]
Sequence	AGGATGGAGCTGACTACGGAACTGCACACTCAGTGGGCTGT
Motif Score	3.373380952
Cell/Tissue List	GM12878; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702950
mod ID: M6ASITE073175		Click to Show/Hide the Full List
mod site	chr6:410454-410455:+		[8]
Sequence	TGGGTATGAACTAAAAAGAGACTGTGCCATGGTGAGAAAAA
Motif Score	3.319380952
Cell/Tissue List	CD8T
Seq Type List	m6A-CLIP/IP
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702951
mod ID: M6ASITE073176		Click to Show/Hide the Full List
mod site	chr6:411030-411031:+		[4]
Sequence	GATTTTCACAGCTTTGAGGAACATGCATAAGAAATGTAGCT
Motif Score	2.951386905
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702952
mod ID: M6ASITE073177		Click to Show/Hide the Full List
mod site	chr6:411128-411129:+		[4]
Sequence	AAATTCCCGTGTTGCTTCAAACTGAGACAGATGGGACTTAA
Motif Score	2.627720238
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702953
mod ID: M6ASITE073178		Click to Show/Hide the Full List
mod site	chr6:411134-411135:+		[4]
Sequence	CCGTGTTGCTTCAAACTGAGACAGATGGGACTTAACAGGCA
Motif Score	2.897386905
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702954
mod ID: M6ASITE073179		Click to Show/Hide the Full List
mod site	chr6:411143-411144:+		[4]
Sequence	TTCAAACTGAGACAGATGGGACTTAACAGGCAATGGGGTCC
Motif Score	4.065041667
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702955
mod ID: M6ASITE073180		Click to Show/Hide the Full List
mod site	chr6:411211-411212:+		[4]
Sequence	CCCCACTTTCTGCTGAAAGAACTGCCAGCAGGTAGGACCCC
Motif Score	3.373380952
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702956
mod ID: M6ASITE073181		Click to Show/Hide the Full List
mod site	chr6:411227-411228:+		[4]
Sequence	AAGAACTGCCAGCAGGTAGGACCCCAGAGGCCCCCAAATGA
Motif Score	3.622404762
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000380956.9
External Link	RMBase: m6A_site_702957

Ref 1	Co-administration of proton pump inhibitors delays elimination of plasma methotrexate in high-dose methotrexate therapy. Br J Clin Pharmacol. 2009 Jan;67(1):44-9. doi: 10.1111/j.1365-2125.2008.03303.x. Epub 2008 Nov 17.
Ref 2	Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome. Nat Biotechnol. 2012 Feb 12;30(3):253-60. doi: 10.1038/nbt.2122.
Ref 3	N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection. Cell Host Microbe. 2016 Nov 9;20(5):654-665. doi: 10.1016/j.chom.2016.09.015. Epub 2016 Oct 20.
Ref 4	Dynamics of the human and viral m(6)A RNA methylomes during HIV-1 infection of T cells. Nat Microbiol. 2016 Feb 22;1:16011. doi: 10.1038/nmicrobiol.2016.11.
Ref 5	N(6)-methyladenosine of HIV-1 RNA regulates viral infection and HIV-1 Gag protein expression. Elife. 2016 Jul 2;5:e15528. doi: 10.7554/eLife.15528.
Ref 6	Structure and thermodynamics of N6-methyladenosine in RNA: a spring-loaded base modification. J Am Chem Soc. 2015 Feb 11;137(5):2107-15. doi: 10.1021/ja513080v. Epub 2015 Feb 2.
Ref 7	Deciphering the "m(6)A Code" via Antibody-Independent Quantitative Profiling. Cell. 2019 Jul 25;178(3):731-747.e16. doi: 10.1016/j.cell.2019.06.013. Epub 2019 Jun 27.
Ref 8	A majority of m6A residues are in the last exons, allowing the potential for 3' UTR regulation. Genes Dev. 2015 Oct 1;29(19):2037-53. doi: 10.1101/gad.269415.115. Epub 2015 Sep 24.
Ref 9	m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells. Cell Stem Cell. 2014 Dec 4;15(6):707-19. doi: 10.1016/j.stem.2014.09.019. Epub 2014 Oct 16.

m6A Target Gene Information

Cite M6AREG

Correspondence

Prof. Feng ZHU

Prof. Shuiping Liu

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