General Information of the m6A Target Gene (ID: M6ATAR01094)
Target Name C-C motif chemokine 5 (CCL5)
Synonyms
EoCP; Eosinophil chemotactic cytokine; SIS-delta; Small-inducible cytokine A5; T cell-specific protein P228; TCP228; T-cell-specific protein RANTES; 3-68; 4-68
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Gene Name CCL5
Chromosomal Location 17q12
Family Intercrine beta (chemokine CC) family
Function
Chemoattractant for blood monocytes, memory T-helper cells and eosinophils. Causes the release of histamine from basophils and activates eosinophils. May activate several chemokine receptors including CCR1, CCR3, CCR4 and CCR5. One of the major HIV-suppressive factors produced by CD8+ T-cells. Recombinant RANTES protein induces a dose-dependent inhibition of different strains of HIV-1, HIV-2, and simian immunodeficiency virus (SIV). The processed form RANTES(3-68) acts as a natural chemotaxis inhibitor and is a more potent inhibitor of HIV-1-infection. The second processed form RANTES(4-68) exhibits reduced chemotactic and HIV-suppressive activity compared with RANTES(1-68) and RANTES(3-68) (PubMed:16791620, PubMed:1380064, PubMed:8525373, PubMed:9516414, PubMed:15923218). May also be an agonist of the G protein-coupled receptor GPR75, stimulating inositol trisphosphate production and calcium mobilization through its activation. Together with GPR75, may play a role in neuron survival through activation of a downstream signaling pathway involving the PI3, Akt and MAP kinases. By activating GPR75 may also play a role in insulin secretion by islet cells (PubMed:23979485).
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Gene ID 6352
Uniprot ID
CCL5_HUMAN
HGNC ID
HGNC:10632
KEGG ID
hsa:6352
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01094)
C-C motif chemokine 5 (CCL5)
5-methylcytidine (m5C)
In total 2 m6A sequence/site(s) in this target gene
mod ID: M5CSITE001089 Click to Show/Hide the Full List
mod site chr17:35871965-35871966:- [2]
Sequence TCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000605140.6; rmsk_4680271; ENST00000651122.1; ENST00000603197.6
External Link RMBase: m5C_site_18581
mod ID: M5CSITE001090 Click to Show/Hide the Full List
mod site chr17:35871969-35871970:- [2]
Sequence GAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAG
Seq Type List Bisulfite-seq
Transcript ID List rmsk_4680271; ENST00000651122.1; ENST00000605140.6; ENST00000603197.6
External Link RMBase: m5C_site_18582
N6-methyladenosine (m6A)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M6ASITE031975 Click to Show/Hide the Full List
mod site chr17:35872231-35872232:- [3]
Sequence ACACAGCAGCAGTTACAAAAACCTTCCCCAGGCTGGACGTG
Motif Score 2.185083333
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000605509.2; ENST00000605140.6; ENST00000603197.6; ENST00000651122.1
External Link RMBase: m6A_site_359313