m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR01078)
Target Name Cyclin-dependent kinase 2-associated protein 2 (CDK2AP2)
Synonyms
CDK2-associated protein 2; DOC-1-related protein; DOC-1R
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Gene Name CDK2AP2
Chromosomal Location 11q13.2
Family CDK2AP family
Function
Acts as a component of the histone deacetylase NuRD complex which participates in the remodeling of chromatin (PubMed:33283408). Inhibits cell cycle G1/S phase transition by repressing CDK2 expression and activation; represses CDK2 activation by inhibiting its interaction with cyclin E and A (PubMed:23781148). Plays a role in regulating the self-renewal of embryonic stem cells (ESCs) and in maintaining cell survival during terminal differentiation of ESCs (By similarity). Regulates microtubule organization of metaphase II oocytes (By similarity).
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Gene ID 10263
Uniprot ID
CDKA2_HUMAN
HGNC ID
HGNC:30833
KEGG ID
hsa:10263
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01078)
Cyclin-dependent kinase 2-associated protein 2 (CDK2AP2)
N6-methyladenosine (m6A)
In total 24 m6A sequence/site(s) in this target gene
mod ID: M6ASITE007643 Click to Show/Hide the Full List
mod site chr11:67506571-67506572:- [2]
Sequence TTGTGTCCTGAGCCATAGTGACTCTTTTATCTGTGTGTCTT
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000301488.7; ENST00000525402.5
External Link RMBase: m6A_site_151562
mod ID: M6ASITE007644 Click to Show/Hide the Full List
mod site chr11:67506693-67506694:- [3]
Sequence CGACAGTGTTGCCCACCGGAACTTTTGTGGCCCCTACCGCT
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; hESCs; A549; LCLs; MT4; MM6; Huh7; CD4T; peripheral-blood; HEK293A-TOA; iSLK; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000525402.5; ENST00000531178.1; ENST00000301488.7
External Link RMBase: m6A_site_151563
mod ID: M6ASITE007645 Click to Show/Hide the Full List
mod site chr11:67506772-67506773:- [3]
Sequence TCCAGGTGGCAGCACTAAGGACACCCCCCCACAACAAGAGT
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; MT4; MM6; Huh7; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531178.1; ENST00000301488.7; ENST00000525402.5
External Link RMBase: m6A_site_151564
mod ID: M6ASITE007646 Click to Show/Hide the Full List
mod site chr11:67506807-67506808:- [3]
Sequence TTGGTGGGTCCCCTCCAGGAACCAAGGAGTGGCCCTCCAGG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; MT4; A549; MM6; Huh7; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000301488.7; ENST00000525402.5; ENST00000531178.1
External Link RMBase: m6A_site_151565
mod ID: M6ASITE007647 Click to Show/Hide the Full List
mod site chr11:67506860-67506861:- [2]
Sequence TGGCCTTCATCCCGAGTTGCACTAACCATCCTGGGCTTCCT
Motif Score 3.252583333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000301488.7; ENST00000525402.5; ENST00000531178.1
External Link RMBase: m6A_site_151566
mod ID: M6ASITE007648 Click to Show/Hide the Full List
mod site chr11:67506915-67506916:- [3]
Sequence GCCTCGGCCTCAGCGTCTGGACCTATCCGGCCACTGCAGAG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; LCLs; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000301488.7; ENST00000531178.1; ENST00000525402.5
External Link RMBase: m6A_site_151567
mod ID: M6ASITE007649 Click to Show/Hide the Full List
mod site chr11:67506957-67506958:- [2]
Sequence CCTGGCAGAGACAGAGCGGAACGCCCGCACGTAACAGGAAG
Motif Score 2.925321429
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000531178.1; ENST00000525402.5; ENST00000301488.7
External Link RMBase: m6A_site_151568
mod ID: M6ASITE007650 Click to Show/Hide the Full List
mod site chr11:67506967-67506968:- [3]
Sequence TCAGAGAGTGCCTGGCAGAGACAGAGCGGAACGCCCGCACG
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; kidney; HEK293T; LCLs; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; m6A-REF-seq; DART-seq; MeRIP-seq
Transcript ID List ENST00000525402.5; ENST00000301488.7; ENST00000531178.1
External Link RMBase: m6A_site_151569
mod ID: M6ASITE007651 Click to Show/Hide the Full List
mod site chr11:67507150-67507151:- [3]
Sequence CAACCTTGAGGATTAACCAAACCTCTAATTTCATCTAGCCG
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; A549; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531178.1; ENST00000301488.7; ENST00000525402.5; ENST00000531506.1
External Link RMBase: m6A_site_151570
mod ID: M6ASITE007652 Click to Show/Hide the Full List
mod site chr11:67507296-67507297:- [3]
Sequence CCTTCATGAGGGAAGGAAGGACATCTGGAGGCCACCTGAGC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000525402.5; ENST00000301488.7; ENST00000531178.1; ENST00000526447.1; ENST00000531506.1
External Link RMBase: m6A_site_151571
mod ID: M6ASITE007653 Click to Show/Hide the Full List
mod site chr11:67507321-67507322:- [3]
Sequence GCTCAGGAAACCGACACTGGACTATCCTTCATGAGGGAAGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; LCLs; A549; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000525402.5; ENST00000526447.1; ENST00000531178.1; ENST00000531506.1; ENST00000301488.7
External Link RMBase: m6A_site_151572
mod ID: M6ASITE007654 Click to Show/Hide the Full List
mod site chr11:67507332-67507333:- [3]
Sequence CAGGCCGCCCTGCTCAGGAAACCGACACTGGACTATCCTTC
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; LCLs; A549; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531178.1; ENST00000301488.7; ENST00000531506.1; ENST00000525402.5; ENST00000526447.1
External Link RMBase: m6A_site_151573
mod ID: M6ASITE007655 Click to Show/Hide the Full List
mod site chr11:67507450-67507451:- [3]
Sequence CTCCCAGAGCACCTACACGGACCTGCTGTCAGTCATAGAGG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; iSLK; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000301488.7; ENST00000531178.1; ENST00000525402.5; ENST00000526447.1; ENST00000531506.1
External Link RMBase: m6A_site_151574
mod ID: M6ASITE007656 Click to Show/Hide the Full List
mod site chr11:67507615-67507616:- [3]
Sequence CCGCTGTTTAACGACTTTGGACCGCCTTCCATGGGCTACGT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; iSLK; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000526447.1; ENST00000531178.1; ENST00000525402.5; ENST00000301488.7; ENST00000531506.1
External Link RMBase: m6A_site_151575
mod ID: M6ASITE007657 Click to Show/Hide the Full List
mod site chr11:67507636-67507637:- [3]
Sequence GGAGCCGGCGCTCCTTTCAGACCGCTGTTTAACGACTTTGG
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; A549; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; iSLK; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000301488.7; ENST00000525402.5; ENST00000531506.1; ENST00000531178.1; ENST00000526447.1
External Link RMBase: m6A_site_151576
mod ID: M6ASITE007658 Click to Show/Hide the Full List
mod site chr11:67507767-67507768:- [3]
Sequence CTTTGGAGGGAATCGGGCGAACCCGGTCCTGGGCTTGGAAA
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; Jurkat; CD4T; iSLK; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531178.1; ENST00000301488.7; ENST00000526447.1; ENST00000531506.1; ENST00000525402.5
External Link RMBase: m6A_site_151577
mod ID: M6ASITE007659 Click to Show/Hide the Full List
mod site chr11:67508070-67508071:- [3]
Sequence GAGTTGGGGATGTCCTACAAACCCATCGCCCCTGCTCCCAG
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531506.1; ENST00000525402.5; ENST00000301488.7; ENST00000526447.1; ENST00000531178.1
External Link RMBase: m6A_site_151578
mod ID: M6ASITE007660 Click to Show/Hide the Full List
mod site chr11:67508196-67508197:- [4]
Sequence CCGCTCGCCCTTCCGGCCAGACCTCTATTTACCAGGGGCGT
Motif Score 2.876744048
Cell/Tissue List A549; HEK293T; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000301488.7; ENST00000525402.5
External Link RMBase: m6A_site_151579
mod ID: M6ASITE007661 Click to Show/Hide the Full List
mod site chr11:67508344-67508345:- [3]
Sequence CACCGCCCAATCCGGAGCAGACAGGTGCGAGGTCCGGAAGG
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; A549; H1B; H1A; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000525402.5; ENST00000301488.7
External Link RMBase: m6A_site_151580
mod ID: M6ASITE007662 Click to Show/Hide the Full List
mod site chr11:67508390-67508391:- [3]
Sequence CGCGCCGGCCCGGGCCGCGAACTCGCCAATTGCGGAGGGCG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; A549; H1B; H1A; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000301488.7; ENST00000525402.5
External Link RMBase: m6A_site_151581
mod ID: M6ASITE007663 Click to Show/Hide the Full List
mod site chr11:67508427-67508428:- [3]
Sequence CCCGCCTCTAGGGCCTGGGGACTAATCGGATTGAGAGCGCG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; A549; H1A; H1B; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000525402.5; ENST00000301488.7
External Link RMBase: m6A_site_151582
mod ID: M6ASITE007664 Click to Show/Hide the Full List
mod site chr11:67508483-67508484:- [3]
Sequence GGGAAGACCCCTCGGCGCGAACCGGCAGCCCAGCCCCGGGT
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; A549; H1A; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000525402.5; ENST00000301488.7
External Link RMBase: m6A_site_151583
mod ID: M6ASITE007665 Click to Show/Hide the Full List
mod site chr11:67508497-67508498:- [3]
Sequence TAGCGCCCGCGCCCGGGAAGACCCCTCGGCGCGAACCGGCA
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; A549; H1A; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000301488.7; ENST00000525402.5
External Link RMBase: m6A_site_151584
mod ID: M6ASITE007666 Click to Show/Hide the Full List
mod site chr11:67508568-67508569:- [3]
Sequence GCAACCCCTGCTGGGCCGAAACTGGGCAGAGCGGAGCAGAC
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; A549; H1A; Jurkat; CD4T; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000301488.7; ENST00000525402.5
External Link RMBase: m6A_site_151585