m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00925)
Target Name E3 ubiquitin-protein ligase TRIM68 (TRIM68)
Synonyms
EC 2.3.2.27; RING finger protein 137; RING-type E3 ubiquitin transferase TRIM68; SSA protein SS-56; SS-56; Tripartite motif-containing protein 68
    Click to Show/Hide
Gene Name TRIM68
Chromosomal Location 11p15.4
Family TRIM/RBCC family
Function
Functions as a ubiquitin E3 ligase. Acts as a coactivator of androgen receptor (AR) depending on its ubiquitin ligase activity.
    Click to Show/Hide
Gene ID 55128
Uniprot ID
TRI68_HUMAN
HGNC ID
HGNC:21161
KEGG ID
hsa:55128
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00925)
E3 ubiquitin-protein ligase TRIM68 (TRIM68)
5-methylcytidine (m5C)
In total 2 m6A sequence/site(s) in this target gene
mod ID: M5CSITE005046 Click to Show/Hide the Full List
mod site chr11:4599292-4599293:-
Sequence CATGTTAGCTAGGATGGTCTCGATCTCCTGACCTCATGATC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000300747.10; ENST00000531101.5
External Link RMBase: m5C_site_6813
mod ID: M5CSITE005047 Click to Show/Hide the Full List
mod site chr11:4599294-4599295:-
Sequence ACCATGTTAGCTAGGATGGTCTCGATCTCCTGACCTCATGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000300747.10; ENST00000531101.5
External Link RMBase: m5C_site_6814
N6-methyladenosine (m6A)
In total 24 m6A sequence/site(s) in this target gene
mod ID: M6ASITE003541 Click to Show/Hide the Full List
mod site chr11:4600184-4600185:- [2]
Sequence ACTGACAGGTATCCCCTGAAACTGAGCTGAGCCCAGTATCC
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000300747.10; ENST00000531101.5
External Link RMBase: m6A_site_128460
mod ID: M6ASITE003542 Click to Show/Hide the Full List
mod site chr11:4600212-4600213:- [2]
Sequence GCCCCCATGGGGCTTGGAGGACCGAGCCACTGACAGGTATC
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; Huh7; HEK293A-TOA; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000300747.10; ENST00000531101.5
External Link RMBase: m6A_site_128461
mod ID: M6ASITE003543 Click to Show/Hide the Full List
mod site chr11:4600279-4600280:- [2]
Sequence CTGCTCCCTGGATGGGGAGGACTAAGAAAGCTACCACCCTA
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531101.5; ENST00000300747.10
External Link RMBase: m6A_site_128462
mod ID: M6ASITE003544 Click to Show/Hide the Full List
mod site chr11:4600325-4600326:- [2]
Sequence GTCCTTGCTACAGCATTGGAACCAACAACACTGCTCCTCTG
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hESCs; GM12878; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531101.5; ENST00000300747.10
External Link RMBase: m6A_site_128463
mod ID: M6ASITE003545 Click to Show/Hide the Full List
mod site chr11:4600594-4600595:- [2]
Sequence AGTATGTAAGCAAAATGTAGACCGGAAGGAGGTGGTCTACT
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000300747.10; ENST00000531101.5
External Link RMBase: m6A_site_128464
mod ID: M6ASITE003546 Click to Show/Hide the Full List
mod site chr11:4600636-4600637:- [2]
Sequence CTGGGAGGTGGAGGTGGGAGACAGGTCTGAGTGGGGCCTGG
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; A549; GM12878; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000300747.10; ENST00000531101.5
External Link RMBase: m6A_site_128465
mod ID: M6ASITE003547 Click to Show/Hide the Full List
mod site chr11:4600726-4600727:- [2]
Sequence CACCAACCAGAAACTGCCAGACAATCCTGAGAGATTTTACC
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; U2OS; Huh7; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000300747.10; ENST00000531101.5; ENST00000526337.5
External Link RMBase: m6A_site_128466
mod ID: M6ASITE003548 Click to Show/Hide the Full List
mod site chr11:4600734-4600735:- [2]
Sequence TATGGAGACACCAACCAGAAACTGCCAGACAATCCTGAGAG
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T; U2OS; Huh7; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000526337.5; ENST00000300747.10; ENST00000531101.5
External Link RMBase: m6A_site_128467
mod ID: M6ASITE003549 Click to Show/Hide the Full List
mod site chr11:4600747-4600748:- [2]
Sequence AAAACGTGTGCACTATGGAGACACCAACCAGAAACTGCCAG
Motif Score 2.897386905
Cell/Tissue List HeLa; U2OS; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000300747.10; ENST00000526337.5; ENST00000531101.5
External Link RMBase: m6A_site_128468
mod ID: M6ASITE003550 Click to Show/Hide the Full List
mod site chr11:4600771-4600772:- [2]
Sequence CCGTCTCATCGTGTCTGAGGACAGAAAACGTGTGCACTATG
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293; U2OS
Seq Type List m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List ENST00000531101.5; ENST00000300747.10; ENST00000526337.5
External Link RMBase: m6A_site_128469
mod ID: M6ASITE003552 Click to Show/Hide the Full List
mod site chr11:4601035-4601036:- [2]
Sequence GGCTAAGAGAGATCCTGAAGACTTATGCAGGTAATGGATCC
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000531101.5; ENST00000526337.5; ENST00000300747.10; ENST00000531717.1
External Link RMBase: m6A_site_128470
mod ID: M6ASITE003553 Click to Show/Hide the Full List
mod site chr11:4602245-4602246:- [2]
Sequence CATGCAGAAACTGGAGTTGAACCATAGCGAGCTCATCCAGC
Motif Score 2.930744048
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531101.5; ENST00000532108.1; ENST00000300747.10; ENST00000533021.1; ENST00000531644.5; ENST00000526337.5
External Link RMBase: m6A_site_128471
mod ID: M6ASITE003554 Click to Show/Hide the Full List
mod site chr11:4602256-4602257:- [2]
Sequence GCAGCGGAGACCATGCAGAAACTGGAGTTGAACCATAGCGA
Motif Score 2.627720238
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531644.5; ENST00000300747.10; ENST00000533021.1; ENST00000532108.1; ENST00000526337.5; ENST00000531101.5
External Link RMBase: m6A_site_128472
mod ID: M6ASITE003555 Click to Show/Hide the Full List
mod site chr11:4602267-4602268:- [2]
Sequence TACAGCGGGAGGCAGCGGAGACCATGCAGAAACTGGAGTTG
Motif Score 2.876744048
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000300747.10; ENST00000531644.5; ENST00000533021.1; ENST00000526337.5; ENST00000531101.5; ENST00000532108.1
External Link RMBase: m6A_site_128473
mod ID: M6ASITE003556 Click to Show/Hide the Full List
mod site chr11:4602352-4602353:- [3]
Sequence TTTGAAAAATACCAGCGATTACTAGAGAAAAAGCAGCCACC
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000531101.5; ENST00000526337.5; ENST00000531644.5; ENST00000300747.10; ENST00000532108.1; ENST00000533021.1
External Link RMBase: m6A_site_128474
mod ID: M6ASITE003557 Click to Show/Hide the Full List
mod site chr11:4602391-4602392:- [2]
Sequence ATACAGGTGGAAACCCGAAAACAGAGTATTGTATGGGAGTT
Motif Score 2.20572619
Cell/Tissue List HeLa; CD4T
Seq Type List m6A-seq
Transcript ID List ENST00000526337.5; ENST00000531644.5; ENST00000531101.5; ENST00000533021.1; ENST00000532108.1; ENST00000300747.10
External Link RMBase: m6A_site_128475
mod ID: M6ASITE003558 Click to Show/Hide the Full List
mod site chr11:4602399-4602400:- [2]
Sequence CTCCACAGATACAGGTGGAAACCCGAAAACAGAGTATTGTA
Motif Score 2.185083333
Cell/Tissue List HeLa; CD4T
Seq Type List m6A-seq
Transcript ID List ENST00000533021.1; ENST00000300747.10; ENST00000531644.5; ENST00000532108.1; ENST00000531101.5; ENST00000526337.5
External Link RMBase: m6A_site_128476
mod ID: M6ASITE003559 Click to Show/Hide the Full List
mod site chr11:4603258-4603259:- [2]
Sequence AAGTTGGTGAAAGGAAACGAACTGCCACCTGGAAGGCAGGT
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000531101.5; ENST00000531644.5; ENST00000526337.5; ENST00000533021.1; ENST00000532108.1; ENST00000300747.10
External Link RMBase: m6A_site_128477
mod ID: M6ASITE003560 Click to Show/Hide the Full List
mod site chr11:4603316-4603317:- [2]
Sequence GAACTTCATGAGGCCCTCGAACATCTGAAGAAAGAGCAAGA
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T; Jurkat
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000531101.5; ENST00000526337.5; ENST00000532108.1; ENST00000531644.5; ENST00000300747.10; ENST00000533021.1
External Link RMBase: m6A_site_128478
mod ID: M6ASITE003561 Click to Show/Hide the Full List
mod site chr11:4603334-4603335:- [2]
Sequence TTTTGTCTCTTGCAGTGGGAACTTCATGAGGCCCTCGAACA
Motif Score 3.373380952
Cell/Tissue List HeLa; Jurkat
Seq Type List m6A-seq
Transcript ID List ENST00000300747.10; ENST00000526337.5; ENST00000533021.1; ENST00000532108.1; ENST00000531101.5; ENST00000531644.5
External Link RMBase: m6A_site_128479
mod ID: M6ASITE003563 Click to Show/Hide the Full List
mod site chr11:4605301-4605302:- [2]
Sequence AGCTCCTGTCCAGCCAAGGAACCTGCGGCCTAATTGGCAGC
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; A549; HepG2; H1A; H1B; GM12878; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531644.5; ENST00000526337.5; ENST00000300747.10; ENST00000533021.1; ENST00000532108.1; ENST00000531101.5
External Link RMBase: m6A_site_128480
mod ID: M6ASITE003564 Click to Show/Hide the Full List
mod site chr11:4605349-4605350:- [2]
Sequence GATCCCAGGAGAATCCCAGAACTGGGGTTACACCTGTCCCC
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; H1A; H1B; GM12878; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531101.5; ENST00000532108.1; ENST00000526337.5; ENST00000300747.10; ENST00000533021.1; ENST00000531644.5
External Link RMBase: m6A_site_128481
mod ID: M6ASITE003565 Click to Show/Hide the Full List
mod site chr11:4605378-4605379:- [2]
Sequence TGCCACAGCTGTCTCTCTGGACTCTGGGAGATCCCAGGAGA
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; HepG2; H1A; H1B; hNPCs; GM12878; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000533021.1; ENST00000531644.5; ENST00000531101.5; ENST00000532108.1; ENST00000300747.10; ENST00000526337.5
External Link RMBase: m6A_site_128482
mod ID: M6ASITE003566 Click to Show/Hide the Full List
mod site chr11:4605506-4605507:- [2]
Sequence TGAGGAGGGTGTGAGAAGGAACCATGGATCCCACAGCCTTG
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293A-TOA
Seq Type List m6A-seq
Transcript ID List ENST00000526337.5; ENST00000532108.1; ENST00000533021.1; ENST00000531644.5; ENST00000531101.5; ENST00000300747.10
External Link RMBase: m6A_site_128483