m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00917)
Target Name Ras-related protein Rab-5A (RAB5A)
Synonyms
EC 3.6.5.2
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Gene Name RAB5A
Chromosomal Location 3p24.3
Family Small GTPase superfamily, Rab family
Function
Small GTPase which cycles between active GTP-bound and inactive GDP-bound states. In its active state, binds to a variety of effector proteins to regulate cellular responses such as of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Active GTP-bound form is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. RAB5A is required for the fusion of plasma membranes and early endosomes (PubMed:10818110, PubMed:14617813, PubMed:16410077, PubMed:15378032). Contributes to the regulation of filopodia extension (PubMed:14978216). Required for the exosomal release of SDCBP, CD63, PDCD6IP and syndecan (PubMed:22660413). Regulates maturation of apoptotic cell-containing phagosomes, probably downstream of DYN2 and PIK3C3 (By similarity).
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Gene ID 5868
Uniprot ID
RAB5A_HUMAN
HGNC ID
HGNC:9783
KEGG ID
hsa:5868
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: YTH domain-containing family protein 2 (YTHDF2)
 Regulator Info 
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03352
 Crosstalk Info 
Epigenetic Regulator Histone acetyltransferase p300 (P300)
Regulated Target Histone H3 lysine 18 lactylation (H3K18la)
Crosstalk relationship Histone modification → m6A
Disease Colorectal cancer
 Disease Info 
m6A Regulator: RNA demethylase ALKBH5 (ALKBH5)
 Regulator Info 
In total 2 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03363
 Crosstalk Info 
Epigenetic Regulator Histone deacetylase 2 (HDAC2)
Regulated Target Histone H3 lysine 27 acetylation (H3K27ac)
Crosstalk relationship Histone modification → m6A
Disease Colorectal cancer
 Disease Info 
Crosstalk ID: M6ACROT03459
 Crosstalk Info 
Epigenetic Regulator Histone deacetylase 1 (HDAC1)
Regulated Target Histone H3 lysine 27 acetylation (H3K27ac)
Crosstalk relationship Histone modification → m6A
Disease Colorectal cancer
 Disease Info 
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00917)
Ras-related protein Rab-5A (RAB5A)
Adenosine-to-Inosine editing (A-to-I)
In total 7 m6A sequence/site(s) in this target gene
mod ID: A2ISITE011593 Click to Show/Hide the Full List
mod site chr3:19951544-19951545:+ [2]
Sequence GTACTTTTTTTTGGTATTTAAGAGATGGGATCTTGCTGTCG
Transcript ID List ENST00000469122.5; ENST00000412966.5; ENST00000446547.5; ENST00000273047.9; ENST00000422242.1
External Link RMBase: RNA-editing_site_95227
mod ID: A2ISITE011594 Click to Show/Hide the Full List
mod site chr3:19952092-19952093:+ [2]
Sequence ACATGGTGGTGCATTCCTGTAGTCCCAGGTATTTGGAGGCT
Transcript ID List ENST00000422242.1; ENST00000412966.5; ENST00000273047.9; rmsk_904225; ENST00000446547.5; ENST00000469122.5
External Link RMBase: RNA-editing_site_95228
mod ID: A2ISITE011595 Click to Show/Hide the Full List
mod site chr3:19962420-19962421:+ [3]
Sequence CTACTAAAAATACAAAAATTAACCGGGCATGGTGGCGCGTG
Transcript ID List ENST00000469122.5; rmsk_904254; ENST00000412966.5; ENST00000446547.5; ENST00000273047.9; ENST00000422242.1
External Link RMBase: RNA-editing_site_95229
mod ID: A2ISITE011597 Click to Show/Hide the Full List
mod site chr3:19962886-19962887:+ [3]
Sequence CAGTGACGCTGTCATAGCTCACTGCAGCCTTGAACTCCTGG
Transcript ID List ENST00000446547.5; ENST00000469122.5; ENST00000422242.1; ENST00000412966.5; ENST00000273047.9
External Link RMBase: RNA-editing_site_95230
mod ID: A2ISITE011598 Click to Show/Hide the Full List
mod site chr3:19963083-19963084:+ [3]
Sequence CTCCCAAAGTGTTGGGATTAAAGGCATGAGCCACCATGCCC
Transcript ID List ENST00000469122.5; ENST00000412966.5; ENST00000422242.1; ENST00000446547.5; ENST00000273047.9
External Link RMBase: RNA-editing_site_95231
mod ID: A2ISITE011599 Click to Show/Hide the Full List
mod site chr3:19965298-19965299:+ [3]
Sequence GGGTGTGGTTGTGTGTGCCTATAGTCCCAACTACTCTGGAG
Transcript ID List ENST00000422242.1; ENST00000469122.5; ENST00000446547.5; ENST00000273047.9; rmsk_904262; ENST00000412966.5
External Link RMBase: RNA-editing_site_95232
mod ID: A2ISITE011600 Click to Show/Hide the Full List
mod site chr3:19971694-19971695:+ [3]
Sequence ATACCGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGAT
Transcript ID List ENST00000273047.9; ENST00000446547.5; ENST00000412966.5; ENST00000469122.5; ENST00000422242.1
External Link RMBase: RNA-editing_site_95233
5-methylcytidine (m5C)
In total 3 m6A sequence/site(s) in this target gene
mod ID: M5CSITE003053 Click to Show/Hide the Full List
mod site chr3:19947275-19947276:+ [4]
Sequence AACTCCAGCGCCGGCGGCGGCGGCGGCGGCGGAGGAGGAGA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000443878.1; ENST00000273047.9
External Link RMBase: m5C_site_31720
mod ID: M5CSITE003054 Click to Show/Hide the Full List
mod site chr3:19947278-19947279:+ [4]
Sequence TCCAGCGCCGGCGGCGGCGGCGGCGGCGGAGGAGGAGAAAG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000443878.1; ENST00000273047.9
External Link RMBase: m5C_site_31721
mod ID: M5CSITE003055 Click to Show/Hide the Full List
mod site chr3:19978397-19978398:+
Sequence TGTAAATGAAATATTCATGGCAATAGGTAAGATTAATATCT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000469122.5; ENST00000446547.5; ENST00000473608.1; ENST00000273047.9; ENST00000422242.1
External Link RMBase: m5C_site_31722
N6-methyladenosine (m6A)
In total 74 m6A sequence/site(s) in this target gene
mod ID: M6ASITE059907 Click to Show/Hide the Full List
mod site chr3:19947164-19947165:+ [5]
Sequence GAAGTGGCTCCGGCGGTGGGACTTGAGTGTTTGTGTTTTGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; A549; H1A; H1B; hESCs; HEK293T; fibroblasts; MM6; Huh7; HEK293A-TOA; MSC; TIME; TREX; iSLK; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580094
mod ID: M6ASITE059908 Click to Show/Hide the Full List
mod site chr3:19947256-19947257:+ [5]
Sequence AGGAGGAAGAATTAGTCGGAACTCCAGCGCCGGCGGCGGCG
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; HepG2; A549; U2OS; H1A; H1B; hNPCs; hESCs; HEK293T; fibroblasts; LCLs; MT4; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; MSC; iSLK; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000273047.9; ENST00000443878.1
External Link RMBase: m6A_site_580095
mod ID: M6ASITE059909 Click to Show/Hide the Full List
mod site chr3:19947441-19947442:+ [6]
Sequence CCACCACCACCGCCATAGATACACTCTCATCCTACGGGCCA
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000422242.1; ENST00000443878.1; ENST00000446547.5; ENST00000273047.9; ENST00000412966.5; ENST00000476544.1
External Link RMBase: m6A_site_580096
mod ID: M6ASITE059910 Click to Show/Hide the Full List
mod site chr3:19947529-19947530:+ [5]
Sequence CTGCGGTCTCAGGTAACCGAACCGCCCCTCCTCCTGCGCAG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; HEK293A-TOA; MSC; TREX; iSLK; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000443878.1; ENST00000273047.9; ENST00000446547.5; ENST00000412966.5; ENST00000476544.1; ENST00000422242.1
External Link RMBase: m6A_site_580097
mod ID: M6ASITE059911 Click to Show/Hide the Full List
mod site chr3:19947561-19947562:+ [5]
Sequence CCTGCGCAGCGGGGGCCTGGACCCCAGGTTATCCGCGGTCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000412966.5; ENST00000443878.1; ENST00000476544.1; ENST00000273047.9; ENST00000422242.1; ENST00000446547.5
External Link RMBase: m6A_site_580098
mod ID: M6ASITE059912 Click to Show/Hide the Full List
mod site chr3:19947613-19947614:+ [5]
Sequence GCGGCCCTGCCGGTACTGAGACCCCCCACCCCTTCTCCCTC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; HEK293A-TOA; iSLK; MSC; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000412966.5; ENST00000273047.9; ENST00000422242.1; ENST00000446547.5; ENST00000443878.1; ENST00000476544.1
External Link RMBase: m6A_site_580099
mod ID: M6ASITE059913 Click to Show/Hide the Full List
mod site chr3:19947653-19947654:+ [5]
Sequence CACGCGCAGCAGTGCCCTGGACCAGAGAACTATCGAACCCG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; H1B; Jurkat; HEK293A-TOA; iSLK; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000476544.1; ENST00000443878.1; ENST00000412966.5; ENST00000446547.5; ENST00000422242.1; ENST00000273047.9
External Link RMBase: m6A_site_580100
mod ID: M6ASITE059914 Click to Show/Hide the Full List
mod site chr3:19947661-19947662:+ [5]
Sequence GCAGTGCCCTGGACCAGAGAACTATCGAACCCGGCGTCTTG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; H1B; Jurkat; HEK293A-TOA; iSLK; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000273047.9; ENST00000422242.1; ENST00000412966.5; ENST00000443878.1; ENST00000446547.5; ENST00000476544.1
External Link RMBase: m6A_site_580101
mod ID: M6ASITE059915 Click to Show/Hide the Full List
mod site chr3:19947669-19947670:+ [5]
Sequence CTGGACCAGAGAACTATCGAACCCGGCGTCTTGTTCTGCCA
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; H1B; H1A; Jurkat; HEK293A-TOA; iSLK; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000476544.1; ENST00000422242.1; ENST00000443878.1; ENST00000273047.9; ENST00000446547.5; ENST00000412966.5
External Link RMBase: m6A_site_580102
mod ID: M6ASITE059916 Click to Show/Hide the Full List
mod site chr3:19947723-19947724:+ [5]
Sequence ATCCTCCAGGGGCTCTGGAGACCGGGATTTGGGGACTGACT
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; H1B; H1A; Jurkat; HEK293A-TOA; iSLK; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000443878.1; ENST00000412966.5; ENST00000476544.1; ENST00000273047.9; ENST00000446547.5; ENST00000422242.1
External Link RMBase: m6A_site_580103
mod ID: M6ASITE059917 Click to Show/Hide the Full List
mod site chr3:19947737-19947738:+ [5]
Sequence CTGGAGACCGGGATTTGGGGACTGACTGAGGGAGCGACGGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; H1B; H1A; Jurkat; HEK293A-TOA; iSLK; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000446547.5; ENST00000422242.1; ENST00000476544.1; ENST00000443878.1; ENST00000273047.9; ENST00000412966.5
External Link RMBase: m6A_site_580104
mod ID: M6ASITE059918 Click to Show/Hide the Full List
mod site chr3:19950879-19950880:+ [7]
Sequence TGAAGAGTCTGAAATTAGGGACTTATTTCAAATTTGGACAT
Motif Score 4.065041667
Cell/Tissue List HepG2; HEK293T; HeLa; A549; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000446547.5; ENST00000273047.9; ENST00000443878.1; ENST00000476544.1; ENST00000412966.5; ENST00000422242.1
External Link RMBase: m6A_site_580105
mod ID: M6ASITE059919 Click to Show/Hide the Full List
mod site chr3:19950896-19950897:+ [7]
Sequence GGGACTTATTTCAAATTTGGACATGGCTAGTCGAGGCGCAA
Motif Score 3.643047619
Cell/Tissue List HepG2; HEK293T; brain; HeLa; A549; hESC-HEK293T; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000273047.9; ENST00000446547.5; ENST00000443878.1; ENST00000422242.1; ENST00000476544.1; ENST00000412966.5
External Link RMBase: m6A_site_580106
mod ID: M6ASITE059920 Click to Show/Hide the Full List
mod site chr3:19950916-19950917:+ [8]
Sequence ACATGGCTAGTCGAGGCGCAACAAGACCCAACGGGCCAAAT
Motif Score 2.173910714
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000422242.1; ENST00000412966.5; ENST00000443878.1; ENST00000476544.1; ENST00000446547.5; ENST00000273047.9
External Link RMBase: m6A_site_580107
mod ID: M6ASITE059921 Click to Show/Hide the Full List
mod site chr3:19950921-19950922:+ [7]
Sequence GCTAGTCGAGGCGCAACAAGACCCAACGGGCCAAATACGGG
Motif Score 2.876744048
Cell/Tissue List HepG2; HEK293T; HeLa; A549; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000412966.5; ENST00000443878.1; ENST00000446547.5; ENST00000476544.1; ENST00000422242.1; ENST00000273047.9
External Link RMBase: m6A_site_580108
mod ID: M6ASITE059922 Click to Show/Hide the Full List
mod site chr3:19950963-19950964:+ [7]
Sequence AATAAAATATGCCAGTTCAAACTAGTACTTCTGGGAGAGTC
Motif Score 2.627720238
Cell/Tissue List HepG2; HEK293T; HeLa; A549; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000476544.1; ENST00000412966.5; ENST00000422242.1; ENST00000446547.5; ENST00000273047.9
External Link RMBase: m6A_site_580109
mod ID: M6ASITE059923 Click to Show/Hide the Full List
mod site chr3:19975617-19975618:+ [5]
Sequence CAGCTGCTTTTCTAACCCAAACTGTATGTCTTGATGACACT
Motif Score 2.627720238
Cell/Tissue List HeLa; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000473608.1; ENST00000273047.9; ENST00000446547.5; ENST00000412966.5; ENST00000469122.5; ENST00000422242.1
External Link RMBase: m6A_site_580110
mod ID: M6ASITE059924 Click to Show/Hide the Full List
mod site chr3:19975633-19975634:+ [6]
Sequence CCAAACTGTATGTCTTGATGACACTACAGTAAAGTTTGAAA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000446547.5; ENST00000273047.9; ENST00000412966.5; ENST00000422242.1; ENST00000469122.5; ENST00000473608.1
External Link RMBase: m6A_site_580111
mod ID: M6ASITE059925 Click to Show/Hide the Full List
mod site chr3:19975743-19975744:+ [6]
Sequence CCATAGTTGTATATGATATCACAAATGAGGTAAGTATGGAT
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000422242.1; ENST00000473608.1; ENST00000446547.5; ENST00000412966.5; ENST00000469122.5; ENST00000273047.9
External Link RMBase: m6A_site_580112
mod ID: M6ASITE059926 Click to Show/Hide the Full List
mod site chr3:19976081-19976082:+ [5]
Sequence GCAAAAAATTGGGTTAAAGAACTTCAGAGGCAAGCAAGTCC
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; fibroblasts; Huh7
Seq Type List m6A-seq; DART-seq; MeRIP-seq
Transcript ID List ENST00000469122.5; ENST00000412966.5; ENST00000422242.1; ENST00000446547.5; ENST00000473608.1; ENST00000273047.9
External Link RMBase: m6A_site_580113
mod ID: M6ASITE059927 Click to Show/Hide the Full List
mod site chr3:19976104-19976105:+ [6]
Sequence TCAGAGGCAAGCAAGTCCTAACATTGTAATAGCTTTATCGG
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000273047.9; ENST00000469122.5; ENST00000473608.1; ENST00000446547.5; ENST00000422242.1
External Link RMBase: m6A_site_580114
mod ID: M6ASITE059928 Click to Show/Hide the Full List
mod site chr3:19976128-19976129:+ [5]
Sequence TGTAATAGCTTTATCGGGAAACAAGGCCGACCTAGCAAATA
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; hNPCs; fibroblasts; A549; Huh7
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000469122.5; ENST00000446547.5; ENST00000473608.1; ENST00000273047.9; ENST00000422242.1
External Link RMBase: m6A_site_580115
mod ID: M6ASITE059929 Click to Show/Hide the Full List
mod site chr3:19978314-19978315:+ [9]
Sequence TTGTTCTGTAAACAGGAAGCACAGTCCTATGCAGATGACAA
Motif Score 2.830589286
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000422242.1; ENST00000469122.5; ENST00000273047.9; ENST00000473608.1; ENST00000446547.5
External Link RMBase: m6A_site_580116
mod ID: M6ASITE059930 Click to Show/Hide the Full List
mod site chr3:19978354-19978355:+ [5]
Sequence ATAGTTTATTATTCATGGAGACATCCGCTAAAACATCAATG
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; hNPCs; fibroblasts; A549; LCLs; Huh7
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000422242.1; ENST00000473608.1; ENST00000446547.5; ENST00000469122.5; ENST00000273047.9
External Link RMBase: m6A_site_580117
mod ID: M6ASITE059931 Click to Show/Hide the Full List
mod site chr3:19978366-19978367:+ [5]
Sequence TCATGGAGACATCCGCTAAAACATCAATGAATGTAAATGAA
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; hNPCs; fibroblasts; A549; LCLs; Huh7
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000473608.1; ENST00000446547.5; ENST00000422242.1; ENST00000273047.9; ENST00000469122.5
External Link RMBase: m6A_site_580118
mod ID: M6ASITE059932 Click to Show/Hide the Full List
mod site chr3:19978444-19978445:+ [5]
Sequence AAATGATCAATATAAGCAAAACAAGTGTGAAGCATATTTGG
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; fibroblasts; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000422242.1; ENST00000273047.9; ENST00000469122.5; ENST00000446547.5; ENST00000473608.1
External Link RMBase: m6A_site_580119
mod ID: M6ASITE059933 Click to Show/Hide the Full List
mod site chr3:19978849-19978850:+ [5]
Sequence GACAAATTATTTTAATGTAAACATTATAAGGAAGATGATTT
Motif Score 2.20572619
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000469122.5; ENST00000446547.5; ENST00000473608.1; ENST00000422242.1; ENST00000273047.9
External Link RMBase: m6A_site_580120
mod ID: M6ASITE059934 Click to Show/Hide the Full List
mod site chr3:19983729-19983730:+ [5]
Sequence AAAAAATTGCCAAAGAATGAACCACAAAATCCAGGAGCAAA
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; hNPCs; fibroblasts; A549; LCLs; Huh7
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000273047.9; ENST00000446547.5; ENST00000473608.1; ENST00000422242.1
External Link RMBase: m6A_site_580121
mod ID: M6ASITE059935 Click to Show/Hide the Full List
mod site chr3:19983732-19983733:+ [6]
Sequence AAATTGCCAAAGAATGAACCACAAAATCCAGGAGCAAATTC
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000422242.1; ENST00000473608.1; ENST00000273047.9; ENST00000446547.5
External Link RMBase: m6A_site_580122
mod ID: M6ASITE059936 Click to Show/Hide the Full List
mod site chr3:19983773-19983774:+ [5]
Sequence TGCCAGAGGAAGAGGAGTAGACCTTACCGAACCCACACAAC
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; hNPCs; fibroblasts; A549; LCLs; Huh7; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000422242.1; ENST00000273047.9; ENST00000446547.5; ENST00000473608.1
External Link RMBase: m6A_site_580123
mod ID: M6ASITE059937 Click to Show/Hide the Full List
mod site chr3:19983783-19983784:+ [5]
Sequence AGAGGAGTAGACCTTACCGAACCCACACAACCAACCAGGAA
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; hNPCs; fibroblasts; A549; LCLs; Huh7; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000473608.1; ENST00000446547.5; ENST00000273047.9; ENST00000422242.1
External Link RMBase: m6A_site_580124
mod ID: M6ASITE059938 Click to Show/Hide the Full List
mod site chr3:19983818-19983819:+ [8]
Sequence CAGGAATCAGTGTTGTAGTAACTAAACCTCTAGTTTGAACT
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9; ENST00000473608.1; ENST00000422242.1; ENST00000446547.5
External Link RMBase: m6A_site_580125
mod ID: M6ASITE059939 Click to Show/Hide the Full List
mod site chr3:19983823-19983824:+ [5]
Sequence ATCAGTGTTGTAGTAACTAAACCTCTAGTTTGAACTAGCTG
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; hNPCs; fibroblasts; A549; LCLs; Huh7; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000473608.1; ENST00000273047.9; ENST00000422242.1; ENST00000446547.5
External Link RMBase: m6A_site_580126
mod ID: M6ASITE059940 Click to Show/Hide the Full List
mod site chr3:19983836-19983837:+ [5]
Sequence TAACTAAACCTCTAGTTTGAACTAGCTGGAATAGTCTTCTG
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; hNPCs; fibroblasts; A549; LCLs; Huh7; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000473608.1; ENST00000422242.1; ENST00000446547.5; ENST00000273047.9
External Link RMBase: m6A_site_580127
mod ID: M6ASITE059941 Click to Show/Hide the Full List
mod site chr3:19983874-19983875:+ [6]
Sequence CTGCTTCCTAAATGTTAATAACAATGGAATTGGAGCATTTA
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000446547.5; ENST00000473608.1; ENST00000422242.1; ENST00000273047.9
External Link RMBase: m6A_site_580128
mod ID: M6ASITE059942 Click to Show/Hide the Full List
mod site chr3:19983909-19983910:+ [8]
Sequence CATTTAACCAGCCCAGTATGACTTCCAAAAGAAGAGACTTA
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9; ENST00000446547.5; ENST00000473608.1; ENST00000422242.1
External Link RMBase: m6A_site_580129
mod ID: M6ASITE059943 Click to Show/Hide the Full List
mod site chr3:19983925-19983926:+ [5]
Sequence TATGACTTCCAAAAGAAGAGACTTATGATAGAGTCAAGTTT
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; hNPCs; fibroblasts; A549; LCLs; Huh7; HEK293A-TOA; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000446547.5; ENST00000473608.1; ENST00000422242.1; ENST00000273047.9
External Link RMBase: m6A_site_580130
mod ID: M6ASITE059944 Click to Show/Hide the Full List
mod site chr3:19983951-19983952:+ [8]
Sequence GATAGAGTCAAGTTTCTAATACAGAATTATTTTAAGTGTTT
Motif Score 2.110482143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000422242.1; ENST00000446547.5; ENST00000473608.1; ENST00000273047.9
External Link RMBase: m6A_site_580131
mod ID: M6ASITE059945 Click to Show/Hide the Full List
mod site chr3:19983975-19983976:+ [5]
Sequence AATTATTTTAAGTGTTTTGAACTTAATTTTTAATAACATGC
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; hNPCs; fibroblasts; A549; Huh7; HEK293A-TOA; iSLK
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000446547.5; ENST00000473608.1; ENST00000273047.9; ENST00000422242.1
External Link RMBase: m6A_site_580132
mod ID: M6ASITE059946 Click to Show/Hide the Full List
mod site chr3:19983990-19983991:+ [8]
Sequence TTTGAACTTAATTTTTAATAACATGCATGGGTCCCTCTCAC
Motif Score 2.168095238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000422242.1; ENST00000273047.9; ENST00000473608.1; ENST00000446547.5
External Link RMBase: m6A_site_580133
mod ID: M6ASITE059947 Click to Show/Hide the Full List
mod site chr3:19984021-19984022:+ [8]
Sequence TCCCTCTCACTAATGTTTCAACAATAGGGAAAAATGAGAAC
Motif Score 2.173910714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000422242.1; ENST00000273047.9; ENST00000473608.1; ENST00000446547.5
External Link RMBase: m6A_site_580134
mod ID: M6ASITE059948 Click to Show/Hide the Full List
mod site chr3:19984040-19984041:+ [5]
Sequence AACAATAGGGAAAAATGAGAACTATGTGGACACTTGTTTCA
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; fibroblasts; A549; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000446547.5; ENST00000273047.9; ENST00000422242.1; ENST00000473608.1
External Link RMBase: m6A_site_580135
mod ID: M6ASITE059949 Click to Show/Hide the Full List
mod site chr3:19984049-19984050:+ [5]
Sequence GAAAAATGAGAACTATGTGGACACTTGTTTCATTGGAAGGT
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; fibroblasts; A549; Huh7
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000446547.5; ENST00000422242.1; ENST00000473608.1; ENST00000273047.9
External Link RMBase: m6A_site_580136
mod ID: M6ASITE059950 Click to Show/Hide the Full List
mod site chr3:19984104-19984105:+ [5]
Sequence TCTCATCACTAGGAATATAGACAAATGACTGTCTGGGCCCA
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; A549; Huh7
Seq Type List m6A-seq; DART-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000473608.1; ENST00000446547.5; ENST00000273047.9; ENST00000422242.1
External Link RMBase: m6A_site_580137
mod ID: M6ASITE059951 Click to Show/Hide the Full List
mod site chr3:19984111-19984112:+ [8]
Sequence ACTAGGAATATAGACAAATGACTGTCTGGGCCCACACAGTT
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9; ENST00000422242.1; ENST00000473608.1; ENST00000446547.5
External Link RMBase: m6A_site_580138
mod ID: M6ASITE059952 Click to Show/Hide the Full List
mod site chr3:19984212-19984213:+ [6]
Sequence CTAATTTGGGCTTTTCAAAAACATTCTTTGTTTAGAAGGAG
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000422242.1; ENST00000273047.9
External Link RMBase: m6A_site_580139
mod ID: M6ASITE059953 Click to Show/Hide the Full List
mod site chr3:19984311-19984312:+ [8]
Sequence GGTACCTGTATTTAAAATGTACATTCCACATTTTAATAAAT
Motif Score 2.856142857
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000422242.1; ENST00000273047.9
External Link RMBase: m6A_site_580140
mod ID: M6ASITE059954 Click to Show/Hide the Full List
mod site chr3:19984318-19984319:+ [8]
Sequence GTATTTAAAATGTACATTCCACATTTTAATAAATTAACCAC
Motif Score 2.053113095
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9; ENST00000422242.1
External Link RMBase: m6A_site_580141
mod ID: M6ASITE059955 Click to Show/Hide the Full List
mod site chr3:19984337-19984338:+ [8]
Sequence CACATTTTAATAAATTAACCACAAGAAAATAATCCCACATA
Motif Score 2.053113095
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000422242.1; ENST00000273047.9
External Link RMBase: m6A_site_580142
mod ID: M6ASITE059956 Click to Show/Hide the Full List
mod site chr3:19984359-19984360:+ [6]
Sequence AAGAAAATAATCCCACATATACAAGGTCAGGGGTGGGGAAG
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000273047.9; ENST00000422242.1
External Link RMBase: m6A_site_580143
mod ID: M6ASITE059957 Click to Show/Hide the Full List
mod site chr3:19984477-19984478:+ [5]
Sequence TTGTTTTAGGAATTTTGAGAACTAATAAATGCACCTTAATG
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580144
mod ID: M6ASITE059958 Click to Show/Hide the Full List
mod site chr3:19984515-19984516:+ [5]
Sequence ATGGTCAGTGTTCCTTTCAAACATGTGAGTTCTTTAACAAA
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580145
mod ID: M6ASITE059959 Click to Show/Hide the Full List
mod site chr3:19984546-19984547:+ [5]
Sequence CTTTAACAAAAATGAAATAAACCAGGTGTCTGTGATTTCTA
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580146
mod ID: M6ASITE059960 Click to Show/Hide the Full List
mod site chr3:19984587-19984588:+ [8]
Sequence ATTAATCACCGCTGGCCATTACACAGGTTTTGTTGTTTGGG
Motif Score 2.07285119
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580147
mod ID: M6ASITE059961 Click to Show/Hide the Full List
mod site chr3:19984589-19984590:+ [8]
Sequence TAATCACCGCTGGCCATTACACAGGTTTTGTTGTTTGGGGT
Motif Score 2.084928571
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580148
mod ID: M6ASITE059962 Click to Show/Hide the Full List
mod site chr3:19984636-19984637:+ [8]
Sequence GGGGCTTTTGTTCCCTTTTGACATAATATAGTCAATGCACT
Motif Score 2.859755952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580149
mod ID: M6ASITE059963 Click to Show/Hide the Full List
mod site chr3:19984654-19984655:+ [8]
Sequence TGACATAATATAGTCAATGCACTAACAATTATGTATATTCA
Motif Score 3.252583333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580150
mod ID: M6ASITE059964 Click to Show/Hide the Full List
mod site chr3:19984658-19984659:+ [9]
Sequence ATAATATAGTCAATGCACTAACAATTATGTATATTCAAACT
Motif Score 2.168095238
Cell/Tissue List liver; HEK293T; hESC-HEK293T
Seq Type List m6A-REF-seq; DART-seq; MAZTER-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580151
mod ID: M6ASITE059965 Click to Show/Hide the Full List
mod site chr3:19984676-19984677:+ [8]
Sequence TAACAATTATGTATATTCAAACTTGATTATTTTAAATTCGA
Motif Score 2.627720238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580152
mod ID: M6ASITE059966 Click to Show/Hide the Full List
mod site chr3:19984708-19984709:+ [8]
Sequence TAAATTCGATCTTCAGCTGTACTGTAAATAGGGTACTGCAT
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580153
mod ID: M6ASITE059967 Click to Show/Hide the Full List
mod site chr3:19984722-19984723:+ [8]
Sequence AGCTGTACTGTAAATAGGGTACTGCATTGTAGTCTCCATAT
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580154
mod ID: M6ASITE059968 Click to Show/Hide the Full List
mod site chr3:19984750-19984751:+ [8]
Sequence GTAGTCTCCATATCTGTATTACTTTTCTGTAATATTTAAGA
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580155
mod ID: M6ASITE059969 Click to Show/Hide the Full List
mod site chr3:19984786-19984787:+ [8]
Sequence TAAGAGTTGCTTAAAAGCATACAAAATGTACTGTTACTAAA
Motif Score 2.110482143
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580156
mod ID: M6ASITE059970 Click to Show/Hide the Full List
mod site chr3:19984795-19984796:+ [8]
Sequence CTTAAAAGCATACAAAATGTACTGTTACTAAAACAGCTAAT
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580157
mod ID: M6ASITE059971 Click to Show/Hide the Full List
mod site chr3:19984801-19984802:+ [8]
Sequence AGCATACAAAATGTACTGTTACTAAAACAGCTAATTATTTC
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580158
mod ID: M6ASITE059972 Click to Show/Hide the Full List
mod site chr3:19984836-19984837:+ [8]
Sequence TATTTCTCTCTCCCCCTTTGACAGGAAGGGGCTTCAGTTGT
Motif Score 2.859755952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580159
mod ID: M6ASITE059973 Click to Show/Hide the Full List
mod site chr3:19984882-19984883:+ [6]
Sequence CATGGCTAGAACCATAATAAACAATGTACCCGTAATTTGTA
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580160
mod ID: M6ASITE059974 Click to Show/Hide the Full List
mod site chr3:19984889-19984890:+ [8]
Sequence AGAACCATAATAAACAATGTACCCGTAATTTGTAACATAAA
Motif Score 2.8355
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580161
mod ID: M6ASITE059975 Click to Show/Hide the Full List
mod site chr3:19984929-19984930:+ [6]
Sequence AGTATTGCAATATGTTAGTAACAATCTTGCAGCCTTCCTTT
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580162
mod ID: M6ASITE059976 Click to Show/Hide the Full List
mod site chr3:19985024-19985025:+ [8]
Sequence ATTTTCATTATATGAAAGCTACCATGTGTCAGAGATGATTT
Motif Score 2.05802381
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580163
mod ID: M6ASITE059977 Click to Show/Hide the Full List
mod site chr3:19985063-19985064:+ [5]
Sequence TTAATCTATTTAAGTGTTGGACTGCTAGGAGAACTTGTACA
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; AML
Seq Type List m6A-seq; DART-seq; miCLIP
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580164
mod ID: M6ASITE059978 Click to Show/Hide the Full List
mod site chr3:19985075-19985076:+ [5]
Sequence AGTGTTGGACTGCTAGGAGAACTTGTACATTTATGATAATG
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580165
mod ID: M6ASITE059979 Click to Show/Hide the Full List
mod site chr3:19985081-19985082:+ [8]
Sequence GGACTGCTAGGAGAACTTGTACATTTATGATAATGCAGAAT
Motif Score 2.856142857
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580166
mod ID: M6ASITE059980 Click to Show/Hide the Full List
mod site chr3:19985109-19985110:+ [8]
Sequence GATAATGCAGAATTAGGAAAACGGTTCACCAGTGTTTAGTT
Motif Score 2.179660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000273047.9
External Link RMBase: m6A_site_580167
N7-methylguanosine (m7G)
In total 2 m6A sequence/site(s) in this target gene
mod ID: m7GSITE000097 Click to Show/Hide the Full List
mod site chr3:19947317-19947318:+ [10]
Sequence AGGAAAGAGGAAGGGGGAGCGGCGAGAGGCGGAGACGGAGC
Cell/Tissue List A549; HeLa; HepG2
Seq Type List BoRed-seq&m7G-RIP-seq; m7G-seq
Transcript ID List ENST00000273047.9; ENST00000443878.1
External Link RMBase: m7G_site_632
mod ID: m7GSITE000098 Click to Show/Hide the Full List
mod site chr3:19947318-19947319:+ [10]
Sequence GGAAAGAGGAAGGGGGAGCGGCGAGAGGCGGAGACGGAGCC
Cell/Tissue List A549; HeLa; HepG2
Seq Type List BoRed-seq&m7G-RIP-seq; m7G-seq
Transcript ID List ENST00000273047.9; ENST00000443878.1
External Link RMBase: m7G_site_633