m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR00886)
| Target Name | Receptor-interacting serine/threonine-protein kinase 4 (RIPK4) | ||||
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| Synonyms |
EC 2.7.11.1; Ankyrin repeat domain-containing protein 3; PKC-delta-interacting protein kinase
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| Gene Name | RIPK4 | ||||
| Chromosomal Location | 21q22.3 | ||||
| Family | Protein kinase superfamily, TKL Ser/Thr protein kinase family | ||||
| Function |
Involved in stratified epithelial development. It is a direct transcriptional target of TP63. Plays a role in NF-kappa-B activation.
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| Uniprot ID | |||||
| HGNC ID | |||||
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00886)
| In total 35 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE055571 | Click to Show/Hide the Full List | ||
| mod site | chr21:41739615-41739616:- | [2] | |
| Sequence | TAGAATAAGTTTGTTGCAGAACGTGACCCTGCGTGCAAACA | ||
| Motif Score | 2.925321429 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548833 | ||
| mod ID: M6ASITE055572 | Click to Show/Hide the Full List | ||
| mod site | chr21:41740236-41740237:- | [3] | |
| Sequence | TGAAAACAATGTTTTATGCAACAAGGAACGAATGGTAGCAG | ||
| Motif Score | 2.173910714 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548835 | ||
| mod ID: M6ASITE055573 | Click to Show/Hide the Full List | ||
| mod site | chr21:41740251-41740252:- | [3] | |
| Sequence | TAGTGGGGTTGGCTTTGAAAACAATGTTTTATGCAACAAGG | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548836 | ||
| mod ID: M6ASITE055574 | Click to Show/Hide the Full List | ||
| mod site | chr21:41740306-41740307:- | [3] | |
| Sequence | ACCTGTTAAAAATGTTCATAACATTGGATAGTCTAGTCTCT | ||
| Motif Score | 2.168095238 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548837 | ||
| mod ID: M6ASITE055575 | Click to Show/Hide the Full List | ||
| mod site | chr21:41740422-41740423:- | [2] | |
| Sequence | ACTGTGTTTTTTATCTTCATACATGACGGTGGGCAGAGAGG | ||
| Motif Score | 2.110482143 | ||
| Cell/Tissue List | HEK293T; hESC-HEK293T | ||
| Seq Type List | DART-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548838 | ||
| mod ID: M6ASITE055576 | Click to Show/Hide the Full List | ||
| mod site | chr21:41740596-41740597:- | [4] | |
| Sequence | GGCACCTGCTGTCTGAAGGGACCGTGGGTCAGAATCATTTC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548839 | ||
| mod ID: M6ASITE055577 | Click to Show/Hide the Full List | ||
| mod site | chr21:41740820-41740821:- | [4] | |
| Sequence | CTAGCTGGCTGCCTGCGGAGACCGGGGGTCCACGTGGGGCT | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; Jurkat; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548840 | ||
| mod ID: M6ASITE055578 | Click to Show/Hide the Full List | ||
| mod site | chr21:41740842-41740843:- | [4] | |
| Sequence | CGCTCCTGCGGCGAAGCAAGACCTAGCTGGCTGCCTGCGGA | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; LCLs; Jurkat; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548841 | ||
| mod ID: M6ASITE055579 | Click to Show/Hide the Full List | ||
| mod site | chr21:41740935-41740936:- | [4] | |
| Sequence | GGCACGCACAGACGGTGGAGACTCTGCTCAGGCATGGGGCC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; LCLs; Jurkat; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548842 | ||
| mod ID: M6ASITE055580 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741084-41741085:- | [4] | |
| Sequence | GCTGGCCCGGGGACCCCTGAACCAGACGGCGCTGCACCTGG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; Jurkat; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548843 | ||
| mod ID: M6ASITE055581 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741092-41741093:- | [4] | |
| Sequence | GCCGATGTGCTGGCCCGGGGACCCCTGAACCAGACGGCGCT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; Jurkat; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548844 | ||
| mod ID: M6ASITE055582 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741149-41741150:- | [4] | |
| Sequence | CACCTGGCTGCCCGCAACGGACACCTGGCCACTGTCAAGCT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; Jurkat; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548845 | ||
| mod ID: M6ASITE055583 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741277-41741278:- | [4] | |
| Sequence | TCTGCAGCCTGCTGGCACAGACACCCCTGCACGTGGCCGCG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548846 | ||
| mod ID: M6ASITE055584 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741591-41741592:- | [4] | |
| Sequence | CGCCTCGGTCAACGAGGTGGACTTTGAGGGCCGGACGCCCA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; Jurkat; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548847 | ||
| mod ID: M6ASITE055585 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741634-41741635:- | [3] | |
| Sequence | AGAACGGGGACGAGTCTAGCACACGGCTGCTGTTGGAGAAG | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548848 | ||
| mod ID: M6ASITE055586 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741645-41741646:- | [2] | |
| Sequence | CTTTGCAGCCCAGAACGGGGACGAGTCTAGCACACGGCTGC | ||
| Motif Score | 3.616982143 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548849 | ||
| mod ID: M6ASITE055587 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741676-41741677:- | [4] | |
| Sequence | CCAAGGATGAGGACCAGTGGACAGCCCTCCACTTTGCAGCC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; kidney; A549; H1A; H1B; hESCs; Jurkat; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq; m6A-REF-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548850 | ||
| mod ID: M6ASITE055588 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741684-41741685:- | [4] | |
| Sequence | TGTCAACGCCAAGGATGAGGACCAGTGGACAGCCCTCCACT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; Jurkat; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548851 | ||
| mod ID: M6ASITE055589 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741765-41741766:- | [3] | |
| Sequence | TAGGGGCTCCACCCCGTTGCACATGGCCGTGGAGAGGAGGG | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548852 | ||
| mod ID: M6ASITE055590 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741813-41741814:- | [3] | |
| Sequence | CGCCAAGTGGCTGCTGCTCAACAATGCCAACCCCAACCTGA | ||
| Motif Score | 2.173910714 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548853 | ||
| mod ID: M6ASITE055591 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741885-41741886:- | [4] | |
| Sequence | GGACGTGGACCTGGCACTGGACAGCGGTGCCAGCCTGCTGC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HEK293T; HepG2; H1A; H1B; Jurkat; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548854 | ||
| mod ID: M6ASITE055592 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741897-41741898:- | [4] | |
| Sequence | CCTGCAGCCGCAGGACGTGGACCTGGCACTGGACAGCGGTG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HEK293T; HepG2; H1A; H1B; Jurkat; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548855 | ||
| mod ID: M6ASITE055593 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741929-41741930:- | [4] | |
| Sequence | GTGTCCGGGGACACCAGCAAACTGATGAAGATCCTGCAGCC | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HEK293T; HepG2; H1B; HEK293A-TOA | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548856 | ||
| mod ID: M6ASITE055594 | Click to Show/Hide the Full List | ||
| mod site | chr21:41741939-41741940:- | [4] | |
| Sequence | GGATGCCATCGTGTCCGGGGACACCAGCAAACTGATGAAGA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HEK293T; HepG2; H1B; HEK293A-TOA | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548857 | ||
| mod ID: M6ASITE055595 | Click to Show/Hide the Full List | ||
| mod site | chr21:41743894-41743895:- | [4] | |
| Sequence | TCGCTGTCCTTTGAGCGGGAACCTTCAACCAGCGGTGAGTG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548858 | ||
| mod ID: M6ASITE055596 | Click to Show/Hide the Full List | ||
| mod site | chr21:41743943-41743944:- | [4] | |
| Sequence | CTCGGGGGTGTCCTCGGTGGACTCCGCCTTCTCTTCCAGAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548859 | ||
| mod ID: M6ASITE055597 | Click to Show/Hide the Full List | ||
| mod site | chr21:41746761-41746762:- | [5] | |
| Sequence | TCCCTTGGCAGATGAGAAGAACATCCTGCACATCATGGTGA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HepG2; HEK293T | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548860 | ||
| mod ID: M6ASITE055598 | Click to Show/Hide the Full List | ||
| mod site | chr21:41751117-41751118:- | [3] | |
| Sequence | GGAGAAGAGCCGGCTCTTCGACACCAAGCACGATGTATACA | ||
| Motif Score | 2.865571429 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548861 | ||
| mod ID: M6ASITE055599 | Click to Show/Hide the Full List | ||
| mod site | chr21:41751169-41751170:- | [3] | |
| Sequence | GCATGGATGGCCTGTTTGGCACAATCGCCTACCTCCCTCCA | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548862 | ||
| mod ID: M6ASITE055600 | Click to Show/Hide the Full List | ||
| mod site | chr21:41756555-41756556:- | [4] | |
| Sequence | CCTGGACCTCAAGCCCGCGAACATCCTGCTGGATGCCCACT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HEK293T; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548863 | ||
| mod ID: M6ASITE055601 | Click to Show/Hide the Full List | ||
| mod site | chr21:41756570-41756571:- | [4] | |
| Sequence | CCCGCCACTCCTGCACCTGGACCTCAAGCCCGCGAACATCC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548864 | ||
| mod ID: M6ASITE055602 | Click to Show/Hide the Full List | ||
| mod site | chr21:41756609-41756610:- | [4] | |
| Sequence | CGAGACGGCGGTGGGCATGAACTTCCTGCACTGCATGGCCC | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548865 | ||
| mod ID: M6ASITE055603 | Click to Show/Hide the Full List | ||
| mod site | chr21:41756728-41756729:- | [4] | |
| Sequence | GTGTATGGCATCTGCCGCGAACCTGTCGGCCTGGTCATGGA | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548866 | ||
| mod ID: M6ASITE055604 | Click to Show/Hide the Full List | ||
| mod site | chr21:41766905-41766906:- | [4] | |
| Sequence | TGCGCCATGTCCACTGGAAGACCTGGCTGGCCATCAAGTGC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; A549; Jurkat; HEK293T; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000332512.8; ENST00000352483.3 | ||
| External Link | RMBase: m6A_site_548867 | ||
| mod ID: M6ASITE055605 | Click to Show/Hide the Full List | ||
| mod site | chr21:41767022-41767023:- | [4] | |
| Sequence | CGATGGAGGGCGACGGCGGGACCCCATGGGCCCTGGCGCTG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; H1B; A549; Jurkat; HEK293T; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000352483.3; ENST00000332512.8 | ||
| External Link | RMBase: m6A_site_548868 | ||
References