m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00878)

Target Name	Neuronal regeneration-related protein (NREP)
Synonyms	Neuronal protein 3.1; Protein p311 Click to Show/Hide
Gene Name	NREP
Chromosomal Location	5q22.1
Function	May have roles in neural function. Ectopic expression augments motility of gliomas. Promotes also axonal regeneration (By similarity). May also have functions in cellular differentiation (By similarity). Induces differentiation of fibroblast into myofibroblast and myofibroblast ameboid migration. Increases retinoic-acid regulation of lipid-droplet biogenesis (By similarity). Down-regulates the expression of TGFB1 and TGFB2 but not of TGFB3 (By similarity). May play a role in the regulation of alveolar generation. Click to Show/Hide
Gene ID	9315
Uniprot ID	NREP_HUMAN
HGNC ID	HGNC:16834
KEGG ID	hsa:9315

RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00878)

Neuronal regeneration-related protein (NREP)

2'-O-Methylation (2'-O-Me)

In total 4 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000367		Click to Show/Hide the Full List
mod site	chr5:111722519-111722520:-		[2]
Sequence	CTCATAGAAAGAGAATTCTAATCGCTTCTCGGCCTTTTGGC
Seq Type List	RiboMeth-seq
Transcript ID List	ENST00000514515.5; ENST00000509025.5; rmsk_1715282
External Link	RMBase: Nm_site_5474
mod ID: 2OMSITE000364		Click to Show/Hide the Full List
mod site	chr5:111722508-111722509:-		[2]
Sequence	AGAATTCTAATCGCTTCTCGGCCTTTTGGCTAAGAACAAGT
Seq Type List	RiboMeth-seq
Transcript ID List	ENST00000509025.5; ENST00000514515.5; rmsk_1715282
External Link	RMBase: Nm_site_5471
mod ID: 2OMSITE000365		Click to Show/Hide the Full List
mod site	chr5:111722509-111722510:-		[2]
Sequence	GAGAATTCTAATCGCTTCTCGGCCTTTTGGCTAAGAACAAG
Seq Type List	RiboMeth-seq
Transcript ID List	ENST00000514515.5; rmsk_1715282; ENST00000509025.5
External Link	RMBase: Nm_site_5472
mod ID: 2OMSITE000366		Click to Show/Hide the Full List
mod site	chr5:111722518-111722519:-		[2]
Sequence	TCATAGAAAGAGAATTCTAATCGCTTCTCGGCCTTTTGGCT
Seq Type List	RiboMeth-seq
Transcript ID List	rmsk_1715282; ENST00000509025.5; ENST00000514515.5
External Link	RMBase: Nm_site_5473

Other RNA modification (m2,2,7Gpp(pN))

In total 1 m6A sequence/site(s) in this target gene
mod ID: RNASITE000013		Click to Show/Hide the Full List
mod site	chr5:111722520-111722521:-		[3]
Sequence	CCTCATAGAAAGAGAATTCTAATCGCTTCTCGGCCTTTTGG
Transcript ID List	ENST00000514515.5; ENST00000509025.5
External Link	RMBase: otherMod_site_758

5-methylcytidine (m5C)

In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE003538		Click to Show/Hide the Full List
mod site	chr5:111730978-111730979:-
Sequence	GACAAACGCTGCCTCCCTGACTCCACTGGGCAGCAGTGAAC
Cell/Tissue List	frontalcortex
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000455559.6; ENST00000379671.7; ENST00000395634.7; ENST00000447165.6; ENST00000514515.5; ENST00000257435.11; ENST00000419114.6; ENST00000450761.6; ENST00000453526.6; ENST00000509025.5; ENST00000504018.1; ENST00000446294.6; ENST00000509427.5; ENST00000515855.5; ENST00000509979.5; ENST00000507742.5; ENST00000508870.5; ENST00000513100.5
External Link	RMBase: m5C_site_35460

N6-methyladenosine (m6A)

In total 38 m6A sequence/site(s) in this target gene
mod ID: M6ASITE069746		Click to Show/Hide the Full List
mod site	chr5:111729468-111729469:-		[4]
Sequence	TGTGTAAATAGAGCAAGAAAACAGTATTCTGCATCTGTGGC
Motif Score	2.20572619
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000379671.7; ENST00000514515.5; ENST00000446294.6; ENST00000447165.6; ENST00000257435.11; ENST00000509025.5
External Link	RMBase: m6A_site_679405
mod ID: M6ASITE069747		Click to Show/Hide the Full List
mod site	chr5:111729598-111729599:-		[4]
Sequence	GTTTCGCTTCTGACTGTTAAACACCGATGACGCATGCACTG
Motif Score	2.20572619
Cell/Tissue List	HeLa; hESC-HEK293T
Seq Type List	m6A-seq; MAZTER-seq
Transcript ID List	ENST00000257435.11; ENST00000379671.7; ENST00000447165.6; ENST00000509025.5; ENST00000514515.5; ENST00000446294.6
External Link	RMBase: m6A_site_679407
mod ID: M6ASITE069748		Click to Show/Hide the Full List
mod site	chr5:111729621-111729622:-		[4]
Sequence	CAGGGCAGGCCTTGTTCTGAACTGTTTCGCTTCTGACTGTT
Motif Score	3.373380952
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000509025.5; ENST00000447165.6; ENST00000257435.11; ENST00000446294.6; ENST00000514515.5; ENST00000379671.7
External Link	RMBase: m6A_site_679409
mod ID: M6ASITE069749		Click to Show/Hide the Full List
mod site	chr5:111729740-111729741:-		[4]
Sequence	GCTCCCAACGAAATGGATAAACAAAAATAAATTACCATCTA
Motif Score	2.20572619
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000447165.6; ENST00000379671.7; ENST00000509025.5; ENST00000446294.6; ENST00000514515.5; ENST00000257435.11
External Link	RMBase: m6A_site_679412
mod ID: M6ASITE069750		Click to Show/Hide the Full List
mod site	chr5:111729774-111729775:-		[5]
Sequence	GATAAGCAAGGTGTAGATTTACATTTTTGTCCTTGCTCCCA
Motif Score	2.07285119
Cell/Tissue List	brain; hESC-HEK293T
Seq Type List	m6A-REF-seq; MAZTER-seq
Transcript ID List	ENST00000446294.6; ENST00000514515.5; ENST00000257435.11; ENST00000447165.6; ENST00000509025.5; ENST00000379671.7
External Link	RMBase: m6A_site_679413
mod ID: M6ASITE069751		Click to Show/Hide the Full List
mod site	chr5:111729847-111729848:-		[6]
Sequence	TAAATTGGAAAACAAGGTCTACAAAATCATGATACTTTTTT
Motif Score	2.078666667
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000514515.5; ENST00000509025.5; ENST00000446294.6; ENST00000447165.6; ENST00000379671.7; ENST00000257435.11
External Link	RMBase: m6A_site_679414
mod ID: M6ASITE069752		Click to Show/Hide the Full List
mod site	chr5:111729856-111729857:-		[4]
Sequence	TCCAAATATTAAATTGGAAAACAAGGTCTACAAAATCATGA
Motif Score	2.20572619
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000379671.7; ENST00000509025.5; ENST00000447165.6; ENST00000257435.11; ENST00000514515.5; ENST00000446294.6
External Link	RMBase: m6A_site_679415
mod ID: M6ASITE069753		Click to Show/Hide the Full List
mod site	chr5:111729915-111729916:-		[4]
Sequence	CCCCTGGAAAAAAACCCAAAACACTGGCATCTGAGTGGGAA
Motif Score	2.20572619
Cell/Tissue List	HeLa; hESC-HEK293T; hNPCs
Seq Type List	m6A-seq; MAZTER-seq
Transcript ID List	ENST00000447165.6; ENST00000257435.11; ENST00000379671.7; ENST00000509025.5; ENST00000446294.6; ENST00000514515.5
External Link	RMBase: m6A_site_679416
mod ID: M6ASITE069754		Click to Show/Hide the Full List
mod site	chr5:111729922-111729923:-		[4]
Sequence	TAAACTCCCCCTGGAAAAAAACCCAAAACACTGGCATCTGA
Motif Score	2.185083333
Cell/Tissue List	HeLa; hNPCs
Seq Type List	m6A-seq
Transcript ID List	ENST00000447165.6; ENST00000446294.6; ENST00000379671.7; ENST00000257435.11; ENST00000509025.5; ENST00000514515.5
External Link	RMBase: m6A_site_679417
mod ID: M6ASITE069755		Click to Show/Hide the Full List
mod site	chr5:111729939-111729940:-		[4]
Sequence	AGCAAAACCGTTTTAAATAAACTCCCCCTGGAAAAAAACCC
Motif Score	2.627720238
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000514515.5; ENST00000509025.5; ENST00000379671.7; ENST00000446294.6; ENST00000257435.11; ENST00000447165.6
External Link	RMBase: m6A_site_679418
mod ID: M6ASITE069756		Click to Show/Hide the Full List
mod site	chr5:111729953-111729954:-		[4]
Sequence	TTGTCGAAAAAAAGAGCAAAACCGTTTTAAATAAACTCCCC
Motif Score	2.185083333
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000379671.7; ENST00000257435.11; ENST00000446294.6; ENST00000514515.5; ENST00000509025.5; ENST00000447165.6
External Link	RMBase: m6A_site_679419
mod ID: M6ASITE069757		Click to Show/Hide the Full List
mod site	chr5:111730104-111730105:-		[6]
Sequence	TCACGGTAGCGGGAGCAATCACAAAACTGTAATTTACTTAC
Motif Score	2.047297619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000446294.6; ENST00000509025.5; ENST00000447165.6; ENST00000379671.7; ENST00000257435.11; ENST00000514515.5; ENST00000395634.7
External Link	RMBase: m6A_site_679420
mod ID: M6ASITE069758		Click to Show/Hide the Full List
mod site	chr5:111730132-111730133:-		[6]
Sequence	TCGTTGGCTGGCGCTCACGGACATGCAGTCACGGTAGCGGG
Motif Score	3.643047619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000514515.5; ENST00000447165.6; ENST00000395634.7; ENST00000509025.5; ENST00000446294.6; ENST00000257435.11; ENST00000379671.7
External Link	RMBase: m6A_site_679421
mod ID: M6ASITE069759		Click to Show/Hide the Full List
mod site	chr5:111730377-111730378:-		[5]
Sequence	ATGCTGCCACAGGACCTGAGACACTGATGAATGGTGCTATT
Motif Score	2.897386905
Cell/Tissue List	brain
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000446294.6; ENST00000379671.7; ENST00000514515.5; ENST00000447165.6; ENST00000257435.11; ENST00000395634.7; ENST00000509025.5
External Link	RMBase: m6A_site_679422
mod ID: M6ASITE069760		Click to Show/Hide the Full List
mod site	chr5:111730511-111730512:-		[4]
Sequence	TTTTCATTTAGATGTAACAAACCTAGTAGTTTATGTTCATC
Motif Score	2.185083333
Cell/Tissue List	HeLa; HEK293T; MT4; Huh7
Seq Type List	m6A-seq; DART-seq; MeRIP-seq
Transcript ID List	ENST00000446294.6; ENST00000509025.5; ENST00000379671.7; ENST00000257435.11; ENST00000395634.7; ENST00000447165.6; ENST00000514515.5
External Link	RMBase: m6A_site_679423
mod ID: M6ASITE069761		Click to Show/Hide the Full List
mod site	chr5:111730515-111730516:-		[7]
Sequence	TTTTTTTTCATTTAGATGTAACAAACCTAGTAGTTTATGTT
Motif Score	2.168095238
Cell/Tissue List	HEK293T; hESC-HEK293T
Seq Type List	DART-seq; MAZTER-seq
Transcript ID List	ENST00000395634.7; ENST00000379671.7; ENST00000509025.5; ENST00000257435.11; ENST00000447165.6; ENST00000446294.6; ENST00000514515.5
External Link	RMBase: m6A_site_679424
mod ID: M6ASITE069762		Click to Show/Hide the Full List
mod site	chr5:111730630-111730631:-		[4]
Sequence	CAATGTCTTCCACAACTCAAACTCCCACCGCGCTCACACAA
Motif Score	2.627720238
Cell/Tissue List	HeLa; MT4; Huh7; iSLK; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000257435.11; ENST00000514515.5; ENST00000509025.5; ENST00000379671.7; ENST00000395634.7; ENST00000447165.6; ENST00000446294.6; ENST00000515855.5
External Link	RMBase: m6A_site_679425
mod ID: M6ASITE069763		Click to Show/Hide the Full List
mod site	chr5:111730710-111730711:-		[6]
Sequence	GTGAAAACGCTCAGAATTTCACACTGTGAATCCACGTTTAC
Motif Score	2.047297619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000515855.5; ENST00000509979.5; ENST00000446294.6; ENST00000447165.6; ENST00000509025.5; ENST00000257435.11; ENST00000379671.7; ENST00000419114.6; ENST00000514515.5; ENST00000507742.5; ENST00000450761.6; ENST00000395634.7
External Link	RMBase: m6A_site_679426
mod ID: M6ASITE069764		Click to Show/Hide the Full List
mod site	chr5:111730756-111730757:-		[4]
Sequence	GGACAAATAGGTGTCATCAAACCAGTTTTTAATCATTCTGA
Motif Score	2.185083333
Cell/Tissue List	HeLa; HEK293T; U2OS; hNPCs; hESCs; fibroblasts; A549; GM12878; LCLs; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000379671.7; ENST00000515855.5; ENST00000450761.6; ENST00000419114.6; ENST00000446294.6; ENST00000509025.5; ENST00000453526.6; ENST00000447165.6; ENST00000509979.5; ENST00000395634.7; ENST00000514515.5; ENST00000257435.11; ENST00000507742.5; ENST00000509427.5
External Link	RMBase: m6A_site_679427
mod ID: M6ASITE069765		Click to Show/Hide the Full List
mod site	chr5:111730774-111730775:-		[4]
Sequence	CTTTAGAGAATTTACAGTGGACAAATAGGTGTCATCAAACC
Motif Score	3.643047619
Cell/Tissue List	HeLa; HEK293T; hESC-HEK293T; U2OS; hNPCs; hESCs; fibroblasts; A549; GM12878; LCLs; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List	ENST00000514515.5; ENST00000257435.11; ENST00000419114.6; ENST00000446294.6; ENST00000509979.5; ENST00000447165.6; ENST00000450761.6; ENST00000509427.5; ENST00000453526.6; ENST00000379671.7; ENST00000509025.5; ENST00000507742.5; ENST00000395634.7; ENST00000515855.5
External Link	RMBase: m6A_site_679428
mod ID: M6ASITE069766		Click to Show/Hide the Full List
mod site	chr5:111730781-111730782:-		[5]
Sequence	AGCCTTGCTTTAGAGAATTTACAGTGGACAAATAGGTGTCA
Motif Score	2.07285119
Cell/Tissue List	brain
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000447165.6; ENST00000509979.5; ENST00000509427.5; ENST00000515855.5; ENST00000419114.6; ENST00000257435.11; ENST00000450761.6; ENST00000446294.6; ENST00000514515.5; ENST00000379671.7; ENST00000509025.5; ENST00000395634.7; ENST00000507742.5; ENST00000453526.6
External Link	RMBase: m6A_site_679429
mod ID: M6ASITE069767		Click to Show/Hide the Full List
mod site	chr5:111730807-111730808:-		[4]
Sequence	GTATAAGAAGAAACTATGGGACTCTGAGCCTTGCTTTAGAG
Motif Score	4.065041667
Cell/Tissue List	HeLa; HEK293T; U2OS; hNPCs; hESCs; fibroblasts; A549; GM12878; LCLs; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000455559.6; ENST00000379671.7; ENST00000453526.6; ENST00000447165.6; ENST00000257435.11; ENST00000514515.5; ENST00000507742.5; ENST00000515855.5; ENST00000446294.6; ENST00000395634.7; ENST00000509427.5; ENST00000509979.5; ENST00000419114.6; ENST00000509025.5; ENST00000450761.6
External Link	RMBase: m6A_site_679430
mod ID: M6ASITE069768		Click to Show/Hide the Full List
mod site	chr5:111730815-111730816:-		[4]
Sequence	ATCATCAAGTATAAGAAGAAACTATGGGACTCTGAGCCTTG
Motif Score	2.627720238
Cell/Tissue List	HeLa; HEK293T; U2OS; hNPCs; hESCs; fibroblasts; A549; GM12878; LCLs; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000395634.7; ENST00000509427.5; ENST00000379671.7; ENST00000446294.6; ENST00000507742.5; ENST00000515855.5; ENST00000419114.6; ENST00000257435.11; ENST00000509025.5; ENST00000450761.6; ENST00000514515.5; ENST00000447165.6; ENST00000453526.6; ENST00000509979.5; ENST00000455559.6
External Link	RMBase: m6A_site_679431
mod ID: M6ASITE069769		Click to Show/Hide the Full List
mod site	chr5:111730897-111730898:-		[6]
Sequence	GTAACACCTCCATTTGTATTACATATGGTGTATGGGTATTG
Motif Score	2.07285119
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000509427.5; ENST00000419114.6; ENST00000455559.6; ENST00000379671.7; ENST00000515855.5; ENST00000395634.7; ENST00000257435.11; ENST00000447165.6; ENST00000450761.6; ENST00000508870.5; ENST00000507742.5; ENST00000514515.5; ENST00000509025.5; ENST00000453526.6; ENST00000446294.6; ENST00000509979.5
External Link	RMBase: m6A_site_679432
mod ID: M6ASITE069770		Click to Show/Hide the Full List
mod site	chr5:111730914-111730915:-		[6]
Sequence	CTCCACTTTTTTTAATCGTAACACCTCCATTTGTATTACAT
Motif Score	2.168095238
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000509427.5; ENST00000509025.5; ENST00000507742.5; ENST00000515855.5; ENST00000450761.6; ENST00000509979.5; ENST00000257435.11; ENST00000453526.6; ENST00000508870.5; ENST00000419114.6; ENST00000455559.6; ENST00000395634.7; ENST00000446294.6; ENST00000447165.6; ENST00000379671.7; ENST00000514515.5
External Link	RMBase: m6A_site_679433
mod ID: M6ASITE069771		Click to Show/Hide the Full List
mod site	chr5:111730959-111730960:-		[8]
Sequence	ACTCCACTGGGCAGCAGTGAACTCCGCTCCCCAAGAATCAG
Motif Score	3.373380952
Cell/Tissue List	HEK293T; HeLa; MT4
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000509025.5; ENST00000509979.5; ENST00000419114.6; ENST00000450761.6; ENST00000395634.7; ENST00000379671.7; ENST00000257435.11; ENST00000514515.5; ENST00000507742.5; ENST00000504018.1; ENST00000509427.5; ENST00000455559.6; ENST00000447165.6; ENST00000508870.5; ENST00000513100.5; ENST00000515855.5; ENST00000446294.6; ENST00000453526.6
External Link	RMBase: m6A_site_679434
mod ID: M6ASITE069772		Click to Show/Hide the Full List
mod site	chr5:111730997-111730998:-		[6]
Sequence	ACCGCAAGAAGAACGATGAGACAAACGCTGCCTCCCTGACT
Motif Score	2.897386905
Cell/Tissue List	hESC-HEK293T; HeLa; MT4
Seq Type List	MAZTER-seq; m6A-seq; MeRIP-seq
Transcript ID List	ENST00000453526.6; ENST00000419114.6; ENST00000455559.6; ENST00000379671.7; ENST00000513100.5; ENST00000509025.5; ENST00000447165.6; ENST00000509427.5; ENST00000509979.5; ENST00000395634.7; ENST00000507742.5; ENST00000508870.5; ENST00000504018.1; ENST00000446294.6; ENST00000515855.5; ENST00000514515.5; ENST00000257435.11; ENST00000450761.6
External Link	RMBase: m6A_site_679435
mod ID: M6ASITE069773		Click to Show/Hide the Full List
mod site	chr5:111731017-111731018:-		[8]
Sequence	TCCTGTCCCAAAGGAAGTGAACCGCAAGAAGAACGATGAGA
Motif Score	2.930744048
Cell/Tissue List	HeLa; MT4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000455559.6; ENST00000508870.5; ENST00000509979.5; ENST00000395634.7; ENST00000507742.5; ENST00000515855.5; ENST00000504018.1; ENST00000513100.5; ENST00000419114.6; ENST00000257435.11; ENST00000509427.5; ENST00000447165.6; ENST00000446294.6; ENST00000509025.5; ENST00000453526.6; ENST00000514515.5; ENST00000379671.7; ENST00000450761.6
External Link	RMBase: m6A_site_679436
mod ID: M6ASITE069774		Click to Show/Hide the Full List
mod site	chr5:111731040-111731041:-		[9]
Sequence	CTGCCTGCTTTGCAGGGAAGACTTCCTGTCCCAAAGGAAGT
Motif Score	3.319380952
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000447165.6; ENST00000507742.5; ENST00000504018.1; ENST00000379671.7; ENST00000455559.6; ENST00000395634.7; ENST00000508870.5; ENST00000515855.5; ENST00000509025.5; ENST00000513100.5; ENST00000514515.5; ENST00000450761.6; ENST00000508161.5; ENST00000509427.5; ENST00000446294.6; ENST00000419114.6; ENST00000257435.11; ENST00000453526.6; ENST00000509979.5
External Link	RMBase: m6A_site_679437
mod ID: M6ASITE069775		Click to Show/Hide the Full List
mod site	chr5:111734523-111734524:-		[9]
Sequence	GCAGTTTGCACTGAAAGAAAACAATCTTAAATCACTTTTAA
Motif Score	2.20572619
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000509025.5; ENST00000455559.6; ENST00000257435.11; ENST00000450761.6; ENST00000453526.6; ENST00000515855.5; ENST00000379671.7; ENST00000447165.6; ENST00000395634.7; ENST00000419114.6; ENST00000509427.5; ENST00000509979.5; ENST00000513100.5; ENST00000508161.5; ENST00000504018.1; ENST00000514515.5; ENST00000446294.6; ENST00000508870.5; ENST00000507742.5; ENST00000503429.1
External Link	RMBase: m6A_site_679445
mod ID: M6ASITE069776		Click to Show/Hide the Full List
mod site	chr5:111735451-111735452:-		[6]
Sequence	AGAACCATTTCCAAACAAGGACATGGAGGGAAGGCTTCCTA
Motif Score	3.643047619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000455559.6; ENST00000446294.6; ENST00000514515.5; ENST00000379671.7; ENST00000507742.5; ENST00000503429.1; ENST00000504018.1; ENST00000508870.5; ENST00000453526.6; ENST00000509427.5; ENST00000515855.5; ENST00000447165.6; ENST00000450761.6; ENST00000508161.5; ENST00000509979.5; ENST00000395634.7; ENST00000513100.5; ENST00000419114.6; ENST00000257435.11; ENST00000505864.5; ENST00000509025.5
External Link	RMBase: m6A_site_679446
mod ID: M6ASITE069777		Click to Show/Hide the Full List
mod site	chr5:111755763-111755764:-		[4]
Sequence	AAGATTCTCAAAATGGTAAGACTTGGTCATCAGAGGAGATT
Motif Score	3.319380952
Cell/Tissue List	HeLa; fibroblasts
Seq Type List	m6A-seq
Transcript ID List	ENST00000509025.5; ENST00000453526.6; ENST00000505864.5; ENST00000447165.6; ENST00000515855.5; ENST00000509979.5; ENST00000509427.5; ENST00000508161.5; ENST00000395634.7; ENST00000257435.11; ENST00000503429.1; ENST00000507742.5; ENST00000513100.5; ENST00000513684.1; ENST00000508870.5; ENST00000450761.6; ENST00000419114.6; ENST00000507032.2; ENST00000504018.1; ENST00000455559.6; ENST00000446294.6; ENST00000379671.7; ENST00000514515.5
External Link	RMBase: m6A_site_679449
mod ID: M6ASITE069779		Click to Show/Hide the Full List
mod site	chr5:111755786-111755787:-		[4]
Sequence	AGGGAGAATAGAAGCCCAAGACTAAGATTCTCAAAATGGTA
Motif Score	3.319380952
Cell/Tissue List	HeLa; hESCs; fibroblasts
Seq Type List	m6A-seq
Transcript ID List	ENST00000395634.7; ENST00000514515.5; ENST00000509025.5; ENST00000507032.2; ENST00000513684.1; ENST00000513100.5; ENST00000379671.7; ENST00000450761.6; ENST00000505864.5; ENST00000455559.6; ENST00000508161.5; ENST00000515855.5; ENST00000419114.6; ENST00000453526.6; ENST00000446294.6; ENST00000257435.11; ENST00000503429.1; ENST00000507742.5; ENST00000447165.6; ENST00000509427.5; ENST00000509979.5; ENST00000504018.1; ENST00000508870.5
External Link	RMBase: m6A_site_679450
mod ID: M6ASITE069780		Click to Show/Hide the Full List
mod site	chr5:111755815-111755816:-		[4]
Sequence	TTGCAGGTTGGTCTCCCTGGACTGAAGAGAGGGAGAATAGA
Motif Score	4.065041667
Cell/Tissue List	HeLa; hESCs; fibroblasts
Seq Type List	m6A-seq
Transcript ID List	ENST00000508870.5; ENST00000507032.2; ENST00000509427.5; ENST00000507742.5; ENST00000513684.1; ENST00000455559.6; ENST00000446294.6; ENST00000504018.1; ENST00000395634.7; ENST00000515855.5; ENST00000509979.5; ENST00000508161.5; ENST00000503429.1; ENST00000450761.6; ENST00000447165.6; ENST00000505864.5; ENST00000379671.7; ENST00000453526.6; ENST00000514515.5; ENST00000257435.11; ENST00000513100.5; ENST00000419114.6; ENST00000509025.5
External Link	RMBase: m6A_site_679451
mod ID: M6ASITE069781		Click to Show/Hide the Full List
mod site	chr5:111755842-111755843:-		[4]
Sequence	GATGTGTCTACTGTATTTAAACATATTTTGCAGGTTGGTCT
Motif Score	2.20572619
Cell/Tissue List	HeLa; hESCs; fibroblasts
Seq Type List	m6A-seq
Transcript ID List	ENST00000455559.6; ENST00000515855.5; ENST00000509025.5; ENST00000447165.6; ENST00000507032.2; ENST00000513684.1; ENST00000513100.5; ENST00000379671.7; ENST00000395634.7; ENST00000514515.5; ENST00000508161.5; ENST00000509427.5; ENST00000505864.5; ENST00000507742.5; ENST00000509979.5; ENST00000453526.6; ENST00000508870.5; ENST00000504018.1; ENST00000257435.11; ENST00000450761.6; ENST00000419114.6; ENST00000503429.1; ENST00000446294.6
External Link	RMBase: m6A_site_679452
mod ID: M6ASITE069782		Click to Show/Hide the Full List
mod site	chr5:111757156-111757157:-		[10]
Sequence	GTAGAGAGGAGAGAGAGTGAACAGGGAGCGGGGCTTTTGTC
Motif Score	2.951386905
Cell/Tissue List	hESCs; fibroblasts
Seq Type List	m6A-seq
Transcript ID List	ENST00000505864.5; ENST00000509025.5; ENST00000257435.11; ENST00000507032.2; ENST00000503429.1; ENST00000509427.5; ENST00000515855.5; ENST00000513684.1; ENST00000455559.6; ENST00000379671.7; ENST00000507742.5; ENST00000395634.7; ENST00000508870.5; ENST00000514515.5; ENST00000450761.6; ENST00000509979.5; ENST00000513100.5; ENST00000446294.6; ENST00000508161.5; ENST00000419114.6; ENST00000453526.6
External Link	RMBase: m6A_site_679453
mod ID: M6ASITE069783		Click to Show/Hide the Full List
mod site	chr5:111976851-111976852:-		[11]
Sequence	TTTATCAAAAGAAACATTGGACAATCAGAATGGGCTGCAGA
Motif Score	3.643047619
Cell/Tissue List	MSC
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000395634.7; ENST00000450761.6
External Link	RMBase: m6A_site_679454
mod ID: M6ASITE069784		Click to Show/Hide the Full List
mod site	chr5:111976858-111976859:-		[11]
Sequence	CATGCTATTTATCAAAAGAAACATTGGACAATCAGAATGGG
Motif Score	2.20572619
Cell/Tissue List	MSC
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000395634.7; ENST00000450761.6
External Link	RMBase: m6A_site_679455

Pseudouridine (Pseudo)

In total 3 m6A sequence/site(s) in this target gene
mod ID: PSESITE000214		Click to Show/Hide the Full List
mod site	chr5:111722505-111722506:-		[3]
Sequence	ATTCTAATCGCTTCTCGGCCTTTTGGCTAAGAACAAGTGTA
Transcript ID List	ENST00000514515.5; ENST00000509025.5; rmsk_1715282
External Link	RMBase: Pseudo_site_3931
mod ID: PSESITE000215		Click to Show/Hide the Full List
mod site	chr5:111722513-111722514:-		[12]
Sequence	GAAAGAGAATTCTAATCGCTTCTCGGCCTTTTGGCTAAGAA
Transcript ID List	ENST00000509025.5; ENST00000514515.5; rmsk_1715282
External Link	RMBase: Pseudo_site_3932
mod ID: PSESITE000216		Click to Show/Hide the Full List
mod site	chr5:111722514-111722515:-		[3]
Sequence	AGAAAGAGAATTCTAATCGCTTCTCGGCCTTTTGGCTAAGA
Transcript ID List	ENST00000514515.5; rmsk_1715282; ENST00000509025.5
External Link	RMBase: Pseudo_site_3933

Ref 1	The PPAR-gamma agonist, darglitazone, restores acute inflammatory responses to cerebral hypoxia-ischemia in the diabetic ob/ob mouse. J Cereb Blood Flow Metab. 2010 February; 30(2): 352-360.
Ref 2	Substoichiometric ribose methylations in spliceosomal snRNAs. Org Biomol Chem. 2017 Oct 31;15(42):8872-8876. doi: 10.1039/c7ob02317k.
Ref 3	MODOMICS: a database of RNA modification pathways. 2017 update. Nucleic Acids Res. 2018 Jan 4;46(D1):D303-D307. doi: 10.1093/nar/gkx1030.
Ref 4	VIRMA mediates preferential m(6)A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Cell Discov. 2018 Feb 27;4:10. doi: 10.1038/s41421-018-0019-0. eCollection 2018.
Ref 5	Single-base mapping of m(6)A by an antibody-independent method. Sci Adv. 2019 Jul 3;5(7):eaax0250. doi: 10.1126/sciadv.aax0250. eCollection 2019 Jul.
Ref 6	Deciphering the "m(6)A Code" via Antibody-Independent Quantitative Profiling. Cell. 2019 Jul 25;178(3):731-747.e16. doi: 10.1016/j.cell.2019.06.013. Epub 2019 Jun 27.
Ref 7	DART-seq: an antibody-free method for global m(6)A detection. Nat Methods. 2019 Dec;16(12):1275-1280. doi: 10.1038/s41592-019-0570-0. Epub 2019 Sep 23.
Ref 8	N6-methyladenosine-dependent regulation of messenger RNA stability. Nature. 2014 Jan 2;505(7481):117-20. doi: 10.1038/nature12730. Epub 2013 Nov 27.
Ref 9	Dynamics of the human and viral m(6)A RNA methylomes during HIV-1 infection of T cells. Nat Microbiol. 2016 Feb 22;1:16011. doi: 10.1038/nmicrobiol.2016.11.
Ref 10	Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites. Cell Rep. 2014 Jul 10;8(1):284-96. doi: 10.1016/j.celrep.2014.05.048. Epub 2014 Jun 26.
Ref 11	Viral and cellular N(6)-methyladenosine and N(6),2'-O-dimethyladenosine epitranscriptomes in the KSHV life cycle. Nat Microbiol. 2018 Jan;3(1):108-120. doi: 10.1038/s41564-017-0056-8. Epub 2017 Nov 6.
Ref 12	snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D158-62. doi: 10.1093/nar/gkj002.

m6A Target Gene Information

Cite M6AREG

Correspondence

Prof. Feng ZHU

Prof. Shuiping Liu

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