m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00678)
Target Name Ly6/PLAUR domain-containing protein 1 (LYPD1)
Synonyms
Putative HeLa tumor suppressor; PHTS
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Gene Name LYPD1
Chromosomal Location 2q21.2
Function
Believed to act as a modulator of nicotinic acetylcholine receptors (nAChRs) activity. In vitro increases receptor desensitization and decreases affinity for ACh of alpha-4:beta-2-containing nAChRs. May play a role in the intracellular trafficking of alpha-4:beta-2 and alpha-7-containing nAChRs and may inhibit their expression at the cell surface. May be involved in the control of anxiety.
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Gene ID 116372
Uniprot ID
LYPD1_HUMAN
HGNC ID
HGNC:28431
KEGG ID
hsa:116372
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
LYPD1 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
RNA demethylase ALKBH5 (ALKBH5) [ERASER]
 Regulator Info 
Representative RNA-seq result indicating the expression of this target gene regulated by ALKBH5
Cell Line 143B cell line Homo sapiens
Treatment: siALKBH5 transfected 143B cells
Control: siControl 143B cells
 GSE154528
Regulation
logFC: 7.22E-01
p-value: 3.53E-02
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary ALKBH5 suppressed the proliferation and invasion capabilities of HCC cells in vitro and in vivo. Mechanistically, ALKBH5-mediated m6A demethylation led to a post-transcriptional inhibition of Ly6/PLAUR domain-containing protein 1 (LYPD1).
Target Regulation Down regulation
Responsed Disease Hepatocellular carcinoma ICD-11: 2C12.02
 Disease Info 
In-vitro Model SMMC-7721 Endocervical adenocarcinoma Homo sapiens CVCL_0534
PLC/PRF/5 Adult hepatocellular carcinoma Homo sapiens CVCL_0485
MHCC97-H Adult hepatocellular carcinoma Homo sapiens CVCL_4972
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
Hep 3B2.1-7 Childhood hepatocellular carcinoma Homo sapiens CVCL_0326
HCCLM3 Adult hepatocellular carcinoma Homo sapiens CVCL_6832
BEL-7402 Endocervical adenocarcinoma Homo sapiens CVCL_5492
Liver cancer [ICD-11: 2C12]
 Disease Info 
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary ALKBH5 suppressed the proliferation and invasion capabilities of HCC cells in vitro and in vivo. Mechanistically, ALKBH5-mediated m6A demethylation led to a post-transcriptional inhibition of Ly6/PLAUR domain-containing protein 1 (LYPD1).
Responsed Disease Hepatocellular carcinoma [ICD-11: 2C12.02]
Target Regulator RNA demethylase ALKBH5 (ALKBH5) ERASER
 Regulator Info 
Target Regulation Down regulation
In-vitro Model SMMC-7721 Endocervical adenocarcinoma Homo sapiens CVCL_0534
PLC/PRF/5 Adult hepatocellular carcinoma Homo sapiens CVCL_0485
MHCC97-H Adult hepatocellular carcinoma Homo sapiens CVCL_4972
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
Hep 3B2.1-7 Childhood hepatocellular carcinoma Homo sapiens CVCL_0326
HCCLM3 Adult hepatocellular carcinoma Homo sapiens CVCL_6832
BEL-7402 Endocervical adenocarcinoma Homo sapiens CVCL_5492
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: RNA demethylase ALKBH5 (ALKBH5)
 Regulator Info 
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03534
 Crosstalk Info 
Epigenetic Regulator WD repeat-containing protein 5 (WDR5)
Regulated Target Histone H3 lysine 4 trimethylation (H3K4me3)
Crosstalk relationship Histone modification → m6A
Disease Liver cancer
 Disease Info 
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00678)
Ly6/PLAUR domain-containing protein 1 (LYPD1)
Adenosine-to-Inosine editing (A-to-I)
In total 22 m6A sequence/site(s) in this target gene
mod ID: A2ISITE009991 Click to Show/Hide the Full List
mod site chr2:132645198-132645199:- [2]
Sequence GAGGATCATGTACGCCCGGAAGTAGGACCTCGTCCAGTCGT
Transcript ID List ENST00000397463.2
External Link RMBase: RNA-editing_site_80205
mod ID: A2ISITE009992 Click to Show/Hide the Full List
mod site chr2:132645238-132645239:- [2]
Sequence TGACCGAGCTGAGGTAGAAAAACGTCTCCGAGAAGGGGAGG
Transcript ID List ENST00000397463.2
External Link RMBase: RNA-editing_site_80206
mod ID: A2ISITE009993 Click to Show/Hide the Full List
mod site chr2:132645256-132645257:- [2]
Sequence TGTACAGGAGCGGGTTGATGACCGAGCTGAGGTAGAAAAAC
Transcript ID List ENST00000397463.2
External Link RMBase: RNA-editing_site_80207
mod ID: A2ISITE009994 Click to Show/Hide the Full List
mod site chr2:132645417-132645418:- [2]
Sequence GCGCCGGGACGCGAAGAGCAACGGGCGCTGCACAAAGCGGG
Transcript ID List ENST00000397463.2
External Link RMBase: RNA-editing_site_80208
mod ID: A2ISITE009995 Click to Show/Hide the Full List
mod site chr2:132645471-132645472:- [2]
Sequence CTCGCTCTGAAAAGTGCTTAAGAAAATCTTCTCAGTTCTCC
Transcript ID List ENST00000397463.2
External Link RMBase: RNA-editing_site_80209
mod ID: A2ISITE009996 Click to Show/Hide the Full List
mod site chr2:132645472-132645473:- [2]
Sequence CCTCGCTCTGAAAAGTGCTTAAGAAAATCTTCTCAGTTCTC
Transcript ID List ENST00000397463.2
External Link RMBase: RNA-editing_site_80210
mod ID: A2ISITE009997 Click to Show/Hide the Full List
mod site chr2:132645535-132645536:- [2]
Sequence TCGCGCCTGAGTTGGGCTCTAGTGACTCGAGACTCAATGAC
Transcript ID List ENST00000397463.2
External Link RMBase: RNA-editing_site_80211
mod ID: A2ISITE009998 Click to Show/Hide the Full List
mod site chr2:132645584-132645585:- [2]
Sequence CAAACTTCATGCTCCTGAAAACCATTCTCTGCAGCAGAATT
Transcript ID List ENST00000397463.2
External Link RMBase: RNA-editing_site_80212
mod ID: A2ISITE009999 Click to Show/Hide the Full List
mod site chr2:132645679-132645680:- [2]
Sequence CCTGATGGGGGCATAGTTTGAGACTGCAGAGTGAGAGTGAC
Transcript ID List ENST00000397463.2
External Link RMBase: RNA-editing_site_80213
mod ID: A2ISITE010000 Click to Show/Hide the Full List
mod site chr2:132645685-132645686:- [2]
Sequence TCCATCCCTGATGGGGGCATAGTTTGAGACTGCAGAGTGAG
Transcript ID List ENST00000397463.2
External Link RMBase: RNA-editing_site_80214
mod ID: A2ISITE010001 Click to Show/Hide the Full List
mod site chr2:132645755-132645756:- [2]
Sequence GGCTGGCAGAGTCAGTCCTTAGAAGTCACTGAGGTGGGCAT
Transcript ID List ENST00000397463.2
External Link RMBase: RNA-editing_site_80215
mod ID: A2ISITE010002 Click to Show/Hide the Full List
mod site chr2:132645828-132645829:- [2]
Sequence TTCAGTATGTACTTGAAGGAAGGAGGTGGAGTGAAAGTTCA
Transcript ID List ENST00000397463.2; ENST00000345008.6
External Link RMBase: RNA-editing_site_80216
mod ID: A2ISITE010003 Click to Show/Hide the Full List
mod site chr2:132645842-132645843:- [2]
Sequence AGCCTGACTGAATTTTCAGTATGTACTTGAAGGAAGGAGGT
Transcript ID List ENST00000397463.2; ENST00000345008.6
External Link RMBase: RNA-editing_site_80217
mod ID: A2ISITE010004 Click to Show/Hide the Full List
mod site chr2:132645851-132645852:- [2]
Sequence AATAAATTCAGCCTGACTGAATTTTCAGTATGTACTTGAAG
Transcript ID List ENST00000345008.6; ENST00000397463.2
External Link RMBase: RNA-editing_site_80218
mod ID: A2ISITE010005 Click to Show/Hide the Full List
mod site chr2:132645881-132645882:- [2]
Sequence AATAATGAAAGAGCTCGGTAAAGCATTCTGAATAAATTCAG
Transcript ID List ENST00000345008.6; ENST00000397463.2
External Link RMBase: RNA-editing_site_80219
mod ID: A2ISITE010006 Click to Show/Hide the Full List
mod site chr2:132645901-132645902:- [2]
Sequence TTCTCTTTTGTTCCTGTGCAAATAATGAAAGAGCTCGGTAA
Transcript ID List ENST00000345008.6; ENST00000397463.2
External Link RMBase: RNA-editing_site_80220
mod ID: A2ISITE010007 Click to Show/Hide the Full List
mod site chr2:132645939-132645940:- [2]
Sequence GGTGTCCTTTTATTCTGGGTAGGGAGCGGGAGTCCGTGTTC
Transcript ID List ENST00000397463.2; ENST00000345008.6
External Link RMBase: RNA-editing_site_80221
mod ID: A2ISITE010008 Click to Show/Hide the Full List
mod site chr2:132645948-132645949:- [2]
Sequence TTTCTTCTGGGTGTCCTTTTATTCTGGGTAGGGAGCGGGAG
Transcript ID List ENST00000397463.2; ENST00000345008.6
External Link RMBase: RNA-editing_site_80222
mod ID: A2ISITE010009 Click to Show/Hide the Full List
mod site chr2:132646037-132646038:- [2]
Sequence CGGCACACTGCTGAAGCTGAAGGAGATGCCACCCCCTCCTG
Transcript ID List ENST00000397463.2; ENST00000345008.6
External Link RMBase: RNA-editing_site_80223
mod ID: A2ISITE010010 Click to Show/Hide the Full List
mod site chr2:132646072-132646073:- [2]
Sequence CACCACCATCCTGTTCCTCAAATTAGCCCTCTTCTCGGCAC
Transcript ID List ENST00000345008.6; ENST00000397463.2
External Link RMBase: RNA-editing_site_80224
mod ID: A2ISITE010011 Click to Show/Hide the Full List
mod site chr2:132646150-132646151:- [2]
Sequence CTGCAACACCCCTCTTTGTAACGGGCCAAGGCCCAAGAAAA
Transcript ID List ENST00000397463.2; ENST00000345008.6
External Link RMBase: RNA-editing_site_80225
mod ID: A2ISITE010012 Click to Show/Hide the Full List
mod site chr2:132646194-132646195:- [2]
Sequence TCCTTCTGCTCCCCAGGGAAACTGAACTCAGTTTGCATCAG
Transcript ID List ENST00000397463.2; ENST00000345008.6
External Link RMBase: RNA-editing_site_80226
N6-methyladenosine (m6A)
In total 31 m6A sequence/site(s) in this target gene
mod ID: M6ASITE047326 Click to Show/Hide the Full List
mod site chr2:132644858-132644859:- [3]
Sequence AAGACCATTAAATGCTTTAGACAGTGTATTTATACCAGTTG
Motif Score 2.897386905
Cell/Tissue List HeLa; A549
Seq Type List m6A-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493511
mod ID: M6ASITE047327 Click to Show/Hide the Full List
mod site chr2:132644875-132644876:- [3]
Sequence GTTGGCTGTGTTAAAGAAAGACCATTAAATGCTTTAGACAG
Motif Score 2.876744048
Cell/Tissue List HeLa; A549
Seq Type List m6A-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493512
mod ID: M6ASITE047328 Click to Show/Hide the Full List
mod site chr2:132644905-132644906:- [3]
Sequence AGAATTTAACACTGTTTCAAACCCGGGGGAGTTGGCTGTGT
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; A549; hNPCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493513
mod ID: M6ASITE047329 Click to Show/Hide the Full List
mod site chr2:132644956-132644957:- [3]
Sequence TACCAATTTTTCAGTGTTGGACTTGACAGCTTCTTTTGCCA
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; hNPCs; fibroblasts; HEK293A-TOA; endometrial
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493514
mod ID: M6ASITE047330 Click to Show/Hide the Full List
mod site chr2:132645026-132645027:- [3]
Sequence GAACACAGTAAATGAATAAAACCATAAAATATTTAGCCCCT
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; hNPCs; fibroblasts; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493515
mod ID: M6ASITE047331 Click to Show/Hide the Full List
mod site chr2:132645044-132645045:- [3]
Sequence AAGAAAAACACAGCATGAGAACACAGTAAATGAATAAAACC
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; hNPCs; fibroblasts; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493516
mod ID: M6ASITE047332 Click to Show/Hide the Full List
mod site chr2:132645057-132645058:- [3]
Sequence GAGAGACAGAGAAAAGAAAAACACAGCATGAGAACACAGTA
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; hNPCs; fibroblasts; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493517
mod ID: M6ASITE047333 Click to Show/Hide the Full List
mod site chr2:132645072-132645073:- [3]
Sequence GACACGAGCAGGAGGGAGAGACAGAGAAAAGAAAAACACAG
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; hNPCs; fibroblasts; peripheral-blood; GSC-11; HEK293A-TOA; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493518
mod ID: M6ASITE047334 Click to Show/Hide the Full List
mod site chr2:132645091-132645092:- [3]
Sequence CAACAATCAGCCCTGGGCAGACACGAGCAGGAGGGAGAGAC
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; hNPCs; fibroblasts; peripheral-blood; GSC-11; HEK293A-TOA; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493519
mod ID: M6ASITE047335 Click to Show/Hide the Full List
mod site chr2:132645192-132645193:- [3]
Sequence CATGTACGCCCGGAAGTAGGACCTCGTCCAGTCGTGCTTGG
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; hNPCs; fibroblasts; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493521
mod ID: M6ASITE047336 Click to Show/Hide the Full List
mod site chr2:132645282-132645283:- [3]
Sequence CCGCCGAAACTGCTGCGAGGACACCGTGTACAGGAGCGGGT
Motif Score 3.643047619
Cell/Tissue List HeLa; A549; HEK293T; U2OS; H1B; hNPCs; fibroblasts; GSC-11; HEK293A-TOA; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493522
mod ID: M6ASITE047337 Click to Show/Hide the Full List
mod site chr2:132645294-132645295:- [3]
Sequence CTGCACGAACACCCGCCGAAACTGCTGCGAGGACACCGTGT
Motif Score 2.627720238
Cell/Tissue List HeLa; A549; HEK293T; U2OS; H1B; hNPCs; fibroblasts; GSC-11; HEK293A-TOA; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493523
mod ID: M6ASITE047338 Click to Show/Hide the Full List
mod site chr2:132645306-132645307:- [3]
Sequence GCAGCACAGCACCTGCACGAACACCCGCCGAAACTGCTGCG
Motif Score 2.951386905
Cell/Tissue List HeLa; A549; HEK293T; U2OS; H1B; hNPCs; fibroblasts; GSC-11; HEK293A-TOA; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493524
mod ID: M6ASITE047339 Click to Show/Hide the Full List
mod site chr2:132645441-132645442:- [3]
Sequence CTCAGTTCTCCTTGCAGAGGACTGGCGCCGGGACGCGAAGA
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; hNPCs; fibroblasts; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493525
mod ID: M6ASITE047340 Click to Show/Hide the Full List
mod site chr2:132645504-132645505:- [3]
Sequence ACTCAATGACTGGGACTTAGACTGGGGCTCGGCCTCGCTCT
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493527
mod ID: M6ASITE047341 Click to Show/Hide the Full List
mod site chr2:132645510-132645511:- [3]
Sequence CTCGAGACTCAATGACTGGGACTTAGACTGGGGCTCGGCCT
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493528
mod ID: M6ASITE047342 Click to Show/Hide the Full List
mod site chr2:132645516-132645517:- [4]
Sequence TAGTGACTCGAGACTCAATGACTGGGACTTAGACTGGGGCT
Motif Score 3.28175
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493529
mod ID: M6ASITE047343 Click to Show/Hide the Full List
mod site chr2:132645524-132645525:- [3]
Sequence TTGGGCTCTAGTGACTCGAGACTCAATGACTGGGACTTAGA
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493530
mod ID: M6ASITE047344 Click to Show/Hide the Full List
mod site chr2:132645584-132645585:- [3]
Sequence CAAACTTCATGCTCCTGAAAACCATTCTCTGCAGCAGAATT
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; MSC; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493532
mod ID: M6ASITE047345 Click to Show/Hide the Full List
mod site chr2:132645601-132645602:- [3]
Sequence CTCCCTCGCTTGACATTCAAACTTCATGCTCCTGAAAACCA
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; fibroblasts; H1299; Huh7; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493533
mod ID: M6ASITE047346 Click to Show/Hide the Full List
mod site chr2:132645677-132645678:- [3]
Sequence TGATGGGGGCATAGTTTGAGACTGCAGAGTGAGAGTGACGT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; fibroblasts; H1299; Huh7; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2
External Link RMBase: m6A_site_493535
mod ID: M6ASITE047347 Click to Show/Hide the Full List
mod site chr2:132646165-132646166:- [5]
Sequence AGTTTGCATCAGCTGCTGCAACACCCCTCTTTGTAACGGGC
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000397463.2; ENST00000345008.6
External Link RMBase: m6A_site_493549
mod ID: M6ASITE047348 Click to Show/Hide the Full List
mod site chr2:132646189-132646190:- [3]
Sequence CTGCTCCCCAGGGAAACTGAACTCAGTTTGCATCAGCTGCT
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; A549; U2OS; H1A; H1B; hESCs; fibroblasts; H1299; Huh7; iSLK; MSC; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000345008.6; ENST00000397463.2
External Link RMBase: m6A_site_493551
mod ID: M6ASITE047349 Click to Show/Hide the Full List
mod site chr2:132646194-132646195:- [3]
Sequence TCCTTCTGCTCCCCAGGGAAACTGAACTCAGTTTGCATCAG
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; A549; U2OS; H1A; H1B; hESCs; fibroblasts; H1299; Huh7; iSLK; MSC; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2; ENST00000345008.6
External Link RMBase: m6A_site_493552
mod ID: M6ASITE047350 Click to Show/Hide the Full List
mod site chr2:132663073-132663074:- [3]
Sequence ACCTTGCTCTTCGAGATGAGACATTTTGCCAAGCAGTTGAC
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; A549; U2OS; H1B; H1A; H1299; Huh7; iSLK; MSC; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000449209.1; ENST00000397463.2; ENST00000345008.6
External Link RMBase: m6A_site_493562
mod ID: M6ASITE047351 Click to Show/Hide the Full List
mod site chr2:132663099-132663100:- [6]
Sequence CCTTTCCAGACACTAAAAGAACAAACACCTTGCTCTTCGAG
Motif Score 2.951386905
Cell/Tissue List HepG2; A549; U2OS; H1A; H1B; H1299; Huh7; iSLK; MSC; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397463.2; ENST00000449209.1; ENST00000345008.6
External Link RMBase: m6A_site_493563
mod ID: M6ASITE047352 Click to Show/Hide the Full List
mod site chr2:132668434-132668435:- [5]
Sequence TTGCACGGTGAACGTTCAAGACATGTGTCAGAAAGAAGTGA
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000397463.2; ENST00000449209.1; ENST00000345008.6
External Link RMBase: m6A_site_493564
mod ID: M6ASITE047353 Click to Show/Hide the Full List
mod site chr2:132668488-132668489:- [5]
Sequence GTGTGAAGAATTCCAGCTGAACAACGACTGCTCCTCCCCCG
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000397463.2; ENST00000345008.6; ENST00000449209.1
External Link RMBase: m6A_site_493565
mod ID: M6ASITE047354 Click to Show/Hide the Full List
mod site chr2:132669942-132669943:- [3]
Sequence TGCCCTCTCCCGGCCCCGGGACTCCGGGAGAATGTGGGTCC
Motif Score 4.065041667
Cell/Tissue List HeLa; GSC-11; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000397463.2; ENST00000449209.1; ENST00000345008.6
External Link RMBase: m6A_site_493566
mod ID: M6ASITE047355 Click to Show/Hide the Full List
mod site chr2:132670135-132670136:- [3]
Sequence CGCGAGCGGGAGGAGCAGAGACCCGCAGCCGGGAGCCCGAG
Motif Score 2.876744048
Cell/Tissue List HeLa; A549; fibroblasts; GSC-11; HEK293T; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000449209.1; ENST00000397463.2; ENST00000345008.6
External Link RMBase: m6A_site_493567
mod ID: M6ASITE047356 Click to Show/Hide the Full List
mod site chr2:132671466-132671467:- [3]
Sequence TCATTTAAGCCCCTTTACAGACCAGCTCTGCTGGGAGGATG
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293A-TOA
Seq Type List m6A-seq
Transcript ID List ENST00000345008.6
External Link RMBase: m6A_site_493568