General Information of the m6A Target Gene (ID: M6ATAR00629)
Target Name Sphingosine kinase 1 (SPHK1)
Synonyms
SK 1; SPK 1; Acetyltransferase SPHK1
    Click to Show/Hide
Gene Name SPHK1
Chromosomal Location 17q25.1
Function
Catalyzes the phosphorylation of sphingosine to form sphingosine 1-phosphate (SPP), a lipid mediator with both intra- and extracellular functions. Also acts on D-erythro-sphingosine and to a lesser extent sphinganine, but not other lipids, such as D,L-threo-dihydrosphingosine, N,N-dimethylsphingosine, diacylglycerol, ceramide, or phosphatidylinositol. In contrast to proapoptotic SPHK2, has a negative effect on intracellular ceramide levels, enhances cell growth and inhibits apoptosis. Involved in the regulation of inflammatory response and neuroinflammation. Via the product sphingosine 1-phosphate, stimulates TRAF2 E3 ubiquitin ligase activity, and promotes activation of NF-kappa-B in response to TNF signaling leading to IL17 secretion. In response to TNF and in parallel to NF-kappa-B activation, negatively regulates RANTES induction through p38 MAPK signaling pathway. Involved in endocytic membrane trafficking induced by sphingosine, recruited to dilate endosomes, also plays a role on later stages of endosomal maturation and membrane fusion independently of its kinase activity. In Purkinje cells, seems to be also involved in the regulation of autophagosome-lysosome fusion upon VEGFA; FUNCTION: Has serine acetyltransferase activity on PTGS2/COX2 in an acetyl-CoA dependent manner. The acetyltransferase activity increases in presence of the kinase substrate, sphingosine. During neuroinflammation, through PTGS2 acetylation, promotes neuronal secretion of specialized preresolving mediators (SPMs), especially 15-R-lipoxin A4, which results in an increase of phagocytic microglia.
    Click to Show/Hide
Gene ID 8877
Uniprot ID
SPHK1_HUMAN
HGNC ID
HGNC:11240
KEGG ID
hsa:8877
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
SPHK1 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
RNA demethylase ALKBH5 (ALKBH5) [ERASER]
Representative RNA-seq result indicating the expression of this target gene regulated by ALKBH5
Cell Line 143B cell line Homo sapiens
Treatment: siALKBH5 transfected 143B cells
Control: siControl 143B cells
GSE154528
Regulation
logFC: 1.71E+00
p-value: 1.04E-14
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary The study aimed to find the role of m6A RNA demethylase alkB homolog 5 (ALKBH5) in ECs angiogenesis during ischemic injury. ALKBH5 helps in the maintenance of angiogenesis in endothelial cells following acute ischemic stress via reduced SPHK1 m6A methylation and downstream eNOS-AKT signaling.
Target Regulation Up regulation
Responsed Disease Diseases of the circulatory system ICD-11: BE2Z
Pathway Response Vascular smooth muscle contraction hsa04270
In-vitro Model HUVEC-C Normal Homo sapiens CVCL_2959
HMVE (human microvascular endothelial cells (HMVE) were obtained from ATCC (ATCC-CRL1730))
Diseases of the circulatory system [ICD-11: BE2Z]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary The study aimed to find the role of m6A RNA demethylase alkB homolog 5 (ALKBH5) in ECs angiogenesis during ischemic injury. ALKBH5 helps in the maintenance of angiogenesis in endothelial cells following acute ischemic stress via reduced SPHK1 m6A methylation and downstream eNOS-AKT signaling.
Responsed Disease Diseases of the circulatory system [ICD-11: BE2Z]
Target Regulator RNA demethylase ALKBH5 (ALKBH5) ERASER
Target Regulation Up regulation
Pathway Response Vascular smooth muscle contraction hsa04270
In-vitro Model HUVEC-C Normal Homo sapiens CVCL_2959
HMVE (human microvascular endothelial cells (HMVE) were obtained from ATCC (ATCC-CRL1730))
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00629)
Sphingosine kinase 1 (SPHK1)
5-methylcytidine (m5C)
In total 5 m6A sequence/site(s) in this target gene
mod ID: M5CSITE001282 Click to Show/Hide the Full List
mod site chr17:76383301-76383302:+ [2]
Sequence CCGATACGCGCGCGGAGCTGCGGCCCCAGGGACCCCGCGTC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000591762.1; ENST00000591651.5; ENST00000545180.5; ENST00000588682.5
External Link RMBase: m5C_site_19983
mod ID: M5CSITE001283 Click to Show/Hide the Full List
mod site chr17:76383304-76383305:+ [2]
Sequence ATACGCGCGCGGAGCTGCGGCCCCAGGGACCCCGCGTCCCA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000591651.5; ENST00000545180.5; ENST00000591762.1; ENST00000588682.5
External Link RMBase: m5C_site_19984
mod ID: M5CSITE001284 Click to Show/Hide the Full List
mod site chr17:76383305-76383306:+ [2]
Sequence TACGCGCGCGGAGCTGCGGCCCCAGGGACCCCGCGTCCCAG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000588682.5; ENST00000545180.5; ENST00000591651.5; ENST00000591762.1
External Link RMBase: m5C_site_19985
mod ID: M5CSITE001285 Click to Show/Hide the Full List
mod site chr17:76383306-76383307:+ [2]
Sequence ACGCGCGCGGAGCTGCGGCCCCAGGGACCCCGCGTCCCAGC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000588682.5; ENST00000545180.5; ENST00000591762.1; ENST00000591651.5
External Link RMBase: m5C_site_19986
mod ID: M5CSITE001286 Click to Show/Hide the Full List
mod site chr17:76383307-76383308:+ [2]
Sequence CGCGCGCGGAGCTGCGGCCCCAGGGACCCCGCGTCCCAGCC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000588682.5; ENST00000591762.1; ENST00000545180.5; ENST00000591651.5
External Link RMBase: m5C_site_19987
N6-methyladenosine (m6A)
In total 50 m6A sequence/site(s) in this target gene
mod ID: M6ASITE035448 Click to Show/Hide the Full List
mod site chr17:76376794-76376795:+ [3]
Sequence TCTTCCCTTGAGGTCTCTGAACCAGGGCACCCATGCAGGTA
Motif Score 2.930744048
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000545180.5; ENST00000591651.5
External Link RMBase: m6A_site_383730
mod ID: M6ASITE035449 Click to Show/Hide the Full List
mod site chr17:76379438-76379439:+ [3]
Sequence GGGGACGACGCAGCAGCAAGACACGGATGACCAAAGGCTGT
Motif Score 2.897386905
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000545180.5; rmsk_4768203; ENST00000591651.5
External Link RMBase: m6A_site_383731
mod ID: M6ASITE035450 Click to Show/Hide the Full List
mod site chr17:76379465-76379466:+ [3]
Sequence TGACCAAAGGCTGTCGGCAAACCACCAGGACACAGGCCTGG
Motif Score 2.185083333
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000591651.5; rmsk_4768203; ENST00000545180.5
External Link RMBase: m6A_site_383732
mod ID: M6ASITE035451 Click to Show/Hide the Full List
mod site chr17:76379474-76379475:+ [3]
Sequence GCTGTCGGCAAACCACCAGGACACAGGCCTGGGACAGAGTC
Motif Score 3.643047619
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000591651.5; ENST00000545180.5; rmsk_4768203
External Link RMBase: m6A_site_383733
mod ID: M6ASITE035452 Click to Show/Hide the Full List
mod site chr17:76379487-76379488:+ [4]
Sequence CACCAGGACACAGGCCTGGGACAGAGTCACAGCCTCAGAAG
Motif Score 3.643047619
Cell/Tissue List HepG2; GSC-11
Seq Type List m6A-seq
Transcript ID List ENST00000591651.5; ENST00000545180.5; rmsk_4768203
External Link RMBase: m6A_site_383734
mod ID: M6ASITE035453 Click to Show/Hide the Full List
mod site chr17:76379510-76379511:+ [4]
Sequence GAGTCACAGCCTCAGAAGGAACCAACCCTGCCAACACCGTG
Motif Score 2.930744048
Cell/Tissue List HepG2; GSC-11
Seq Type List m6A-seq
Transcript ID List ENST00000545180.5; rmsk_4768203; ENST00000591651.5
External Link RMBase: m6A_site_383735
mod ID: M6ASITE035454 Click to Show/Hide the Full List
mod site chr17:76379538-76379539:+ [3]
Sequence TGCCAACACCGTGATCGTAGACTTCCCAACCTCCAAAACTG
Motif Score 3.319380952
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000545180.5; ENST00000591651.5; rmsk_4768203
External Link RMBase: m6A_site_383736
mod ID: M6ASITE035455 Click to Show/Hide the Full List
mod site chr17:76379555-76379556:+ [3]
Sequence TAGACTTCCCAACCTCCAAAACTGTGAGACAGTCAATTTCT
Motif Score 2.627720238
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000545180.5; rmsk_4768203; ENST00000591651.5
External Link RMBase: m6A_site_383737
mod ID: M6ASITE035456 Click to Show/Hide the Full List
mod site chr17:76379563-76379564:+ [3]
Sequence CCAACCTCCAAAACTGTGAGACAGTCAATTTCTGTTGTCTA
Motif Score 2.897386905
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000545180.5; rmsk_4768203; ENST00000591651.5
External Link RMBase: m6A_site_383738
mod ID: M6ASITE035457 Click to Show/Hide the Full List
mod site chr17:76379594-76379595:+ [5]
Sequence CTGTTGTCTACGCCACCAGGACACTAATACAAATGCCTATA
Motif Score 3.643047619
Cell/Tissue List HepG2; A549
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000591651.5; ENST00000545180.5
External Link RMBase: m6A_site_383739
mod ID: M6ASITE035458 Click to Show/Hide the Full List
mod site chr17:76379636-76379637:+ [3]
Sequence ATGCTGGGCAGGCAGCTGAGACAAATGGAGTGGGTAGGGCT
Motif Score 2.897386905
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000591651.5; ENST00000545180.5
External Link RMBase: m6A_site_383740
mod ID: M6ASITE035459 Click to Show/Hide the Full List
mod site chr17:76383091-76383092:+ [6]
Sequence GGGGGGCTCGGAGGTGCAGGACCCATCATTCCGACACGCGC
Motif Score 3.622404762
Cell/Tissue List HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000545180.5; ENST00000591651.5; ENST00000588682.5; ENST00000591762.1
External Link RMBase: m6A_site_383741
mod ID: M6ASITE035460 Click to Show/Hide the Full List
mod site chr17:76383234-76383235:+ [4]
Sequence ACGCGCTCGGGACGCTCTGGACCCAGCGGGGACTGCCCGGG
Motif Score 3.622404762
Cell/Tissue List HepG2; GSC-11; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000591651.5; ENST00000545180.5; ENST00000588682.5; ENST00000591762.1
External Link RMBase: m6A_site_383742
mod ID: M6ASITE035461 Click to Show/Hide the Full List
mod site chr17:76383245-76383246:+ [4]
Sequence ACGCTCTGGACCCAGCGGGGACTGCCCGGGGGCCGCGCAAG
Motif Score 4.065041667
Cell/Tissue List HepG2; GSC-11; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000591651.5; ENST00000591762.1; ENST00000545180.5; ENST00000588682.5
External Link RMBase: m6A_site_383743
mod ID: M6ASITE035462 Click to Show/Hide the Full List
mod site chr17:76383312-76383313:+ [4]
Sequence GCGGAGCTGCGGCCCCAGGGACCCCGCGTCCCAGCCAGTGC
Motif Score 3.622404762
Cell/Tissue List HepG2; GSC-11; HEK293T; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000545180.5; ENST00000588682.5; ENST00000591762.1; ENST00000591651.5
External Link RMBase: m6A_site_383744
mod ID: M6ASITE035463 Click to Show/Hide the Full List
mod site chr17:76383351-76383352:+ [4]
Sequence GCCCCCCGACCCGCCCGGGGACTCTCGGGTCCCGCCCGTCT
Motif Score 4.065041667
Cell/Tissue List HepG2; GSC-11
Seq Type List m6A-seq
Transcript ID List ENST00000588682.5; ENST00000591651.5; ENST00000591762.1; ENST00000545180.5
External Link RMBase: m6A_site_383745
mod ID: M6ASITE035464 Click to Show/Hide the Full List
mod site chr17:76383428-76383429:+ [3]
Sequence TGGGTCCTCCGGAAGAGAAGACACCGCGGAGGCGTGCCGGA
Motif Score 2.897386905
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000591762.1; ENST00000591651.5; ENST00000545180.5; ENST00000588682.5
External Link RMBase: m6A_site_383746
mod ID: M6ASITE035465 Click to Show/Hide the Full List
mod site chr17:76383492-76383493:+ [3]
Sequence TGGCTGCGTGCTCCTCCTGGACCTGCCTCTTCTCGACTTTA
Motif Score 3.622404762
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000588682.5; ENST00000545180.5; ENST00000591651.5; ENST00000591762.1
External Link RMBase: m6A_site_383747
mod ID: M6ASITE035466 Click to Show/Hide the Full List
mod site chr17:76383950-76383951:+ [7]
Sequence TGTCGCCTGCTCTACCCGGGACAGCGCGCTAGGCGGCCTCA
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000545180.5; ENST00000590379.5; ENST00000591762.1; ENST00000591651.5; ENST00000588682.5
External Link RMBase: m6A_site_383748
mod ID: M6ASITE035467 Click to Show/Hide the Full List
mod site chr17:76384792-76384793:+ [7]
Sequence CGGTGGCGCCTCCCCAGCAAACCGGACCGACTGGGTAGGGC
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; MM6; CD4T; GSC-11; HEK293T; iSLK; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000588682.5; ENST00000323374.8; ENST00000590959.5; ENST00000590379.5; ENST00000592299.5; ENST00000591762.1; ENST00000591651.5; ENST00000545180.5
External Link RMBase: m6A_site_383750
mod ID: M6ASITE035468 Click to Show/Hide the Full List
mod site chr17:76384797-76384798:+ [7]
Sequence GCGCCTCCCCAGCAAACCGGACCGACTGGGTAGGGCCGCCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; MM6; CD4T; GSC-11; HEK293T; iSLK; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000591762.1; ENST00000590959.5; ENST00000591651.5; ENST00000592299.5; ENST00000545180.5; ENST00000588682.5; ENST00000590379.5; ENST00000323374.8
External Link RMBase: m6A_site_383751
mod ID: M6ASITE035469 Click to Show/Hide the Full List
mod site chr17:76384876-76384877:+ [7]
Sequence GCCCTCGCGGGGCCCCGGGAACTGGGCCACTTGTCGCTTGG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; GSC-11; HEK293T; iSLK; MSC; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000591762.1; ENST00000592299.5; ENST00000323374.8; ENST00000590959.5; ENST00000590379.5; ENST00000545180.5; ENST00000588682.5; ENST00000591651.5
External Link RMBase: m6A_site_383752
mod ID: M6ASITE035470 Click to Show/Hide the Full List
mod site chr17:76385048-76385049:+ [4]
Sequence TCTGGAGCTCCGGGCAGGGGACACGGCAACCTGGATGGCTG
Motif Score 3.643047619
Cell/Tissue List HepG2; GSC-11; HEK293T; iSLK; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000588682.5; ENST00000591651.5; ENST00000545180.5; ENST00000323374.8; ENST00000590959.5; ENST00000591762.1; ENST00000590379.5; ENST00000592299.5
External Link RMBase: m6A_site_383753
mod ID: M6ASITE035471 Click to Show/Hide the Full List
mod site chr17:76385090-76385091:+ [4]
Sequence GGCAGGGATCCTCTCCCAGAACTTCGTGCCCAGCAATGTCC
Motif Score 3.373380952
Cell/Tissue List HepG2; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000588682.5; ENST00000590959.5; ENST00000591762.1; ENST00000323374.8; ENST00000592299.5; ENST00000545180.5; ENST00000591651.5; ENST00000590379.5
External Link RMBase: m6A_site_383754
mod ID: M6ASITE035472 Click to Show/Hide the Full List
mod site chr17:76385141-76385142:+ [6]
Sequence TGGGATTTTTACGCAGCTGGACTCCCCTCCCCCTGGCAGCC
Motif Score 4.065041667
Cell/Tissue List HEK293T; HEK293A-TOA; iSLK; MSC; TIME; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000323374.8; ENST00000588682.5; ENST00000591651.5; ENST00000545180.5; ENST00000591762.1; ENST00000592299.5; ENST00000590379.5; ENST00000590959.5
External Link RMBase: m6A_site_383755
mod ID: M6ASITE035473 Click to Show/Hide the Full List
mod site chr17:76385325-76385326:+ [7]
Sequence GGCGCCCTCGGAGGCACCGGACCTCAGCTCTCTGGACTTCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; HEK293A-TOA; iSLK; MSC; TIME; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000392496.3; ENST00000545180.5; ENST00000590959.5; ENST00000590379.5; ENST00000588682.5; ENST00000591651.5; ENST00000323374.8; ENST00000592299.5; ENST00000591762.1
External Link RMBase: m6A_site_383756
mod ID: M6ASITE035474 Click to Show/Hide the Full List
mod site chr17:76385340-76385341:+ [7]
Sequence ACCGGACCTCAGCTCTCTGGACTTCCCGGGAACCTGGCTCC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; A549; HEK293A-TOA; iSLK; MSC; TIME; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000392496.3; ENST00000591762.1; ENST00000590379.5; ENST00000592299.5; ENST00000588682.5; ENST00000323374.8; ENST00000545180.5; ENST00000591651.5; ENST00000590959.5
External Link RMBase: m6A_site_383757
mod ID: M6ASITE035475 Click to Show/Hide the Full List
mod site chr17:76385351-76385352:+ [7]
Sequence GCTCTCTGGACTTCCCGGGAACCTGGCTCCCCGCGCGTGGT
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; A549; HEK293A-TOA; iSLK; MSC; TIME; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000592299.5; ENST00000591651.5; ENST00000392496.3; ENST00000591762.1; ENST00000545180.5; ENST00000590379.5; ENST00000323374.8; ENST00000590959.5; ENST00000588682.5
External Link RMBase: m6A_site_383758
mod ID: M6ASITE035476 Click to Show/Hide the Full List
mod site chr17:76385420-76385421:+ [7]
Sequence TCTGGCAGCTGCGGCCCCGGACTCCGCCAGCGCTGTCTTCT
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; A549; iSLK; MSC; TIME; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000590959.5; ENST00000545180.5; ENST00000323374.8; ENST00000392496.3; ENST00000591762.1; ENST00000590379.5; ENST00000591651.5; ENST00000592299.5; ENST00000588682.5
External Link RMBase: m6A_site_383759
mod ID: M6ASITE035477 Click to Show/Hide the Full List
mod site chr17:76385611-76385612:+ [5]
Sequence GCGCCCCCACAGCGCCAGGGACCCCCTGGCAGCGGGAGCCG
Motif Score 3.622404762
Cell/Tissue List HepG2; HeLa; MSC; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000545180.5; ENST00000590959.5; ENST00000591762.1; ENST00000392496.3; ENST00000591651.5; ENST00000323374.8; ENST00000590379.5; ENST00000588682.5; ENST00000592299.5
External Link RMBase: m6A_site_383760
mod ID: M6ASITE035478 Click to Show/Hide the Full List
mod site chr17:76385759-76385760:+ [7]
Sequence GCTGTGGACGATCGGGAGAAACATTATCCCTCACGAGGCCA
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; MM6; HEK293A-TOA
Seq Type List m6A-seq
Transcript ID List ENST00000591762.1; ENST00000392496.3; ENST00000590959.5; ENST00000323374.8; ENST00000590379.5; ENST00000592299.5; ENST00000591651.5; ENST00000545180.5; ENST00000588682.5
External Link RMBase: m6A_site_383761
mod ID: M6ASITE035479 Click to Show/Hide the Full List
mod site chr17:76386038-76386039:+ [7]
Sequence CCGCGTGCTGGTGCTGCTGAACCCGCGCGGCGGCAAGGGCA
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000392496.3; ENST00000590379.5; ENST00000545180.5; ENST00000587167.1; ENST00000590959.5; ENST00000591762.1; ENST00000323374.8; ENST00000592299.5; ENST00000588682.5
External Link RMBase: m6A_site_383762
mod ID: M6ASITE035480 Click to Show/Hide the Full List
mod site chr17:76386229-76386230:+ [7]
Sequence TCTCCCTGCAGAGCGGCGGAACCACGCGCGGGAGCTGGTGC
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; MM6; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000590959.5; ENST00000545180.5; ENST00000392496.3; ENST00000590379.5; ENST00000591762.1; ENST00000588682.5; ENST00000323374.8; ENST00000587167.1; ENST00000592299.5
External Link RMBase: m6A_site_383763
mod ID: M6ASITE035481 Click to Show/Hide the Full List
mod site chr17:76386321-76386322:+ [7]
Sequence GGCTGATGCACGAGGTGAGGACCGCACTGCGCGGCTAGGCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; MM6; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000592299.5; ENST00000588682.5; ENST00000590959.5; ENST00000323374.8; ENST00000392496.3; ENST00000590379.5; ENST00000587167.1; ENST00000591762.1; ENST00000545180.5
External Link RMBase: m6A_site_383764
mod ID: M6ASITE035482 Click to Show/Hide the Full List
mod site chr17:76386428-76386429:+ [4]
Sequence TGGAGCGGCCTGACTGGGAGACCGCCATCCAGAAGCCCCTG
Motif Score 2.876744048
Cell/Tissue List HepG2; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000587167.1; ENST00000545180.5; ENST00000590959.5; ENST00000323374.8; ENST00000592299.5; ENST00000588682.5; ENST00000590379.5; ENST00000591762.1; ENST00000392496.3
External Link RMBase: m6A_site_383765
mod ID: M6ASITE035483 Click to Show/Hide the Full List
mod site chr17:76386495-76386496:+ [7]
Sequence CGCGCTGGCAGCTTCCTTGAACCATTATGCTGGGTGAGAGC
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000545180.5; ENST00000392496.3; ENST00000591762.1; ENST00000587167.1; ENST00000592299.5; ENST00000323374.8; ENST00000590959.5; ENST00000588682.5
External Link RMBase: m6A_site_383766
mod ID: M6ASITE035484 Click to Show/Hide the Full List
mod site chr17:76386828-76386829:+ [7]
Sequence TGAGCAGGTCACCAATGAAGACCTCCTGACCAACTGCACGC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293A-TOA
Seq Type List m6A-seq
Transcript ID List ENST00000590959.5; ENST00000592299.5; ENST00000545180.5; ENST00000392496.3; ENST00000588682.5; ENST00000591762.1; ENST00000323374.8
External Link RMBase: m6A_site_383767
mod ID: M6ASITE035485 Click to Show/Hide the Full List
mod site chr17:76386882-76386883:+ [7]
Sequence CCGGCTGCTGTCACCCATGAACCTGCTGTCTCTGCACACGG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; MM6; Huh7; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000545180.5; ENST00000591762.1; ENST00000323374.8; ENST00000590959.5; ENST00000592299.5; ENST00000392496.3; ENST00000588682.5
External Link RMBase: m6A_site_383768
mod ID: M6ASITE035486 Click to Show/Hide the Full List
mod site chr17:76386963-76386964:+ [7]
Sequence GGGCTTCATTGCTGATGTGGACCTAGAGAGTGAGAAGTATC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; fibroblasts; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000323374.8; ENST00000545180.5; ENST00000592299.5; ENST00000590959.5; ENST00000392496.3; ENST00000591762.1
External Link RMBase: m6A_site_383769
mod ID: M6ASITE035487 Click to Show/Hide the Full List
mod site chr17:76387094-76387095:+ [7]
Sequence TAGGAAGAGTGGGTTCCAAGACACCTGCCTCCCCCGTTGTG
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; fibroblasts; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000392496.3; ENST00000592299.5; ENST00000323374.8; ENST00000545180.5; ENST00000591762.1; ENST00000590959.5
External Link RMBase: m6A_site_383770
mod ID: M6ASITE035488 Click to Show/Hide the Full List
mod site chr17:76387178-76387179:+ [7]
Sequence AGCCAGTGCCCTCTCACTGGACAGTGGTGCCCGACGAGGAC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; fibroblasts; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000592299.5; ENST00000392496.3; ENST00000323374.8; ENST00000590959.5; ENST00000545180.5; ENST00000591762.1
External Link RMBase: m6A_site_383771
mod ID: M6ASITE035489 Click to Show/Hide the Full List
mod site chr17:76387197-76387198:+ [7]
Sequence GACAGTGGTGCCCGACGAGGACTTTGTGCTAGTCCTGGCAC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; fibroblasts; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000392496.3; ENST00000590959.5; ENST00000591762.1; ENST00000323374.8; ENST00000545180.5; ENST00000592299.5
External Link RMBase: m6A_site_383772
mod ID: M6ASITE035490 Click to Show/Hide the Full List
mod site chr17:76387296-76387297:+ [8]
Sequence TGGCGTCATGCATCTGTTCTACGTGCGGGCGGGAGTGTCTC
Motif Score 2.05260119
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000392496.3; ENST00000592299.5; ENST00000591762.1; ENST00000545180.5; ENST00000323374.8; ENST00000590959.5
External Link RMBase: m6A_site_383773
mod ID: M6ASITE035491 Click to Show/Hide the Full List
mod site chr17:76387500-76387501:+ [7]
Sequence GCAGGGCCAGGTGCACCCAAACTACTTCTGGATGGTCAGCG
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; MM6; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000591762.1; ENST00000590959.5; ENST00000592299.5; ENST00000545180.5; ENST00000323374.8; ENST00000392496.3
External Link RMBase: m6A_site_383774
mod ID: M6ASITE035492 Click to Show/Hide the Full List
mod site chr17:76387615-76387616:+ [8]
Sequence CGCGCTGTGCCTTAGTGTCTACTTGCAGGACCCTTCCTCCT
Motif Score 2.500660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000591762.1; ENST00000590959.5; ENST00000323374.8; ENST00000592299.5; ENST00000392496.3; ENST00000545180.5
External Link RMBase: m6A_site_383775
mod ID: M6ASITE035493 Click to Show/Hide the Full List
mod site chr17:76387624-76387625:+ [7]
Sequence CCTTAGTGTCTACTTGCAGGACCCTTCCTCCTTCCCTAGGG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; MM6; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000590959.5; ENST00000323374.8; ENST00000591762.1; ENST00000545180.5; ENST00000592299.5; ENST00000392496.3
External Link RMBase: m6A_site_383776
mod ID: M6ASITE035494 Click to Show/Hide the Full List
mod site chr17:76387684-76387685:+ [7]
Sequence CTCCTGTGGGGGTGGAGGAGACTCCTCTGGAGAAGGGTGAG
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000323374.8; ENST00000592299.5; ENST00000591762.1; ENST00000590959.5; ENST00000392496.3; ENST00000545180.5
External Link RMBase: m6A_site_383777
mod ID: M6ASITE035495 Click to Show/Hide the Full List
mod site chr17:76387730-76387731:+ [4]
Sequence GGAGGCTATGCTTTGGGGGGACAGGCCAGAATGAAGTCCTG
Motif Score 3.643047619
Cell/Tissue List HepG2; MM6; Huh7; peripheral-blood; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000392496.3; ENST00000323374.8; ENST00000590959.5; ENST00000545180.5; ENST00000591762.1; ENST00000592299.5
External Link RMBase: m6A_site_383778
mod ID: M6ASITE035496 Click to Show/Hide the Full List
mod site chr17:76387812-76387813:+ [9]
Sequence GCCTTCTAGTTTGTTCTGAGACCCCCACCCCACGAACCAAA
Motif Score 2.876744048
Cell/Tissue List MM6; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000590959.5; ENST00000392496.3; ENST00000323374.8; ENST00000591762.1; ENST00000592299.5; ENST00000545180.5
External Link RMBase: m6A_site_383779
mod ID: M6ASITE035497 Click to Show/Hide the Full List
mod site chr17:76387827-76387828:+ [9]
Sequence CTGAGACCCCCACCCCACGAACCAAATCCAAATAAAGTGAC
Motif Score 2.930744048
Cell/Tissue List MM6; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000545180.5; ENST00000592299.5; ENST00000591762.1; ENST00000323374.8; ENST00000590959.5; ENST00000392496.3
External Link RMBase: m6A_site_383780