m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR00618)
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
AKT1S1
can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
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Methyltransferase-like 14 (METTL14) [WRITER]
| Representative RNA-seq result indicating the expression of this target gene regulated by METTL14 | ||
| Cell Line | mouse embryonic stem cells | Mus musculus |
|
Treatment: METTL14-/- ESCs
Control: Wild type ESCs
|
GSE145309 | |
| Regulation |
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logFC: 6.65E-01 p-value: 2.87E-13 |
| More Results | Click to View More RNA-seq Results | |
| In total 1 item(s) under this regulator | ||||
| Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene | [1] | |||
| Response Summary | METTL14-mediated m6A modification of circORC5 suppresses gastric cancer progression by regulating miR-30c-2-3p/Proline-rich AKT1 substrate 1 (AKT1S1) axis. METTL14 was downregulated in GC tissue samples and its low expression acted as a prognostic factor of poor survival in patients with GC. | |||
| Target Regulation | Down regulation | |||
| Responsed Disease | Gastric cancer | ICD-11: 2B72 | ||
| In-vitro Model | SGC-7901 | Gastric carcinoma | Homo sapiens | CVCL_0520 |
| MKN28 | Gastric tubular adenocarcinoma | Homo sapiens | CVCL_1416 | |
| MGC-803 | Gastric mucinous adenocarcinoma | Homo sapiens | CVCL_5334 | |
| GES-1 | Normal | Homo sapiens | CVCL_EQ22 | |
| BGC-823 | Gastric carcinoma | Homo sapiens | CVCL_3360 | |
| AGS | Gastric adenocarcinoma | Homo sapiens | CVCL_0139 | |
Gastric cancer [ICD-11: 2B72]
| In total 1 item(s) under this disease | ||||
| Experiment 1 Reporting the m6A-centered Disease Response | [1] | |||
| Response Summary | METTL14-mediated m6A modification of circORC5 suppresses gastric cancer progression by regulating miR-30c-2-3p/Proline-rich AKT1 substrate 1 (AKT1S1) axis. METTL14 was downregulated in GC tissue samples and its low expression acted as a prognostic factor of poor survival in patients with GC. | |||
| Responsed Disease | Gastric cancer [ICD-11: 2B72] | |||
| Target Regulator | Methyltransferase-like 14 (METTL14) | WRITER | ||
| Target Regulation | Down regulation | |||
| In-vitro Model | SGC-7901 | Gastric carcinoma | Homo sapiens | CVCL_0520 |
| MKN28 | Gastric tubular adenocarcinoma | Homo sapiens | CVCL_1416 | |
| MGC-803 | Gastric mucinous adenocarcinoma | Homo sapiens | CVCL_5334 | |
| GES-1 | Normal | Homo sapiens | CVCL_EQ22 | |
| BGC-823 | Gastric carcinoma | Homo sapiens | CVCL_3360 | |
| AGS | Gastric adenocarcinoma | Homo sapiens | CVCL_0139 | |
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: Methyltransferase-like 14 (METTL14)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT03497 | ||
| Regulated Target | Histone H3 lysine 18 lactylation (H3K18la) | |
| Crosstalk relationship | Histone modification → m6A | |
| Disease | Gastric cancer | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00618)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE009273 | Click to Show/Hide the Full List | ||
| mod site | chr19:49875213-49875214:- | [2] | |
| Sequence | TTAGAACAGGCCCCGGATCTAGACTTTCTGAGTCCAGGTCC | ||
| Transcript ID List | ENST00000391831.5; ENST00000391835.1; ENST00000391830.1; ENST00000391833.5; rmsk_5023401; ENST00000391834.6; ENST00000391832.7; ENST00000344175.9; ENST00000629179.1 | ||
| External Link | RMBase: RNA-editing_site_71956 | ||
N1-methyladenosine (m1A)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: M1ASITE000071 | Click to Show/Hide the Full List | ||
| mod site | chr19:49871695-49871696:- | [3] | |
| Sequence | ATGGCAGCCTGAGCGAGGAGACCCCCGCCGGCCCCCCCACC | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | m1A-seq | ||
| Transcript ID List | ENST00000391831.5; ENST00000344175.9; ENST00000391833.5; ENST00000629179.1; ENST00000391835.1; ENST00000391832.7; ENST00000391834.6 | ||
| External Link | RMBase: m1A_site_569 | ||
5-methylcytidine (m5C)
| In total 4 m6A sequence/site(s) in this target gene | |||
| mod ID: M5CSITE002107 | Click to Show/Hide the Full List | ||
| mod site | chr19:49869145-49869146:- | [4] | |
| Sequence | CGTCCACCCAAGGTGGGGGGCAGGGGCCCTCACTCTCCGGC | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000391831.5; ENST00000391834.6; ENST00000344175.9; ENST00000629179.1; ENST00000391833.5; ENST00000391835.1; ENST00000391832.7 | ||
| External Link | RMBase: m5C_site_25321 | ||
| mod ID: M5CSITE002108 | Click to Show/Hide the Full List | ||
| mod site | chr19:49869729-49869730:- | [4] | |
| Sequence | CGACCTGCCGCGCCGAGGAGCGGCATCTGTCCCGTTTCCCG | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000629179.1; ENST00000391832.7; ENST00000391833.5; ENST00000344175.9; ENST00000391835.1; ENST00000391831.5; ENST00000391834.6 | ||
| External Link | RMBase: m5C_site_25322 | ||
| mod ID: M5CSITE002109 | Click to Show/Hide the Full List | ||
| mod site | chr19:49870534-49870535:- | ||
| Sequence | GCCACATGATAAGGCAGTAACAGCTGATTATCTCAGCCCTC | ||
| Cell/Tissue List | T24 | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000391831.5; ENST00000391833.5; ENST00000391832.7; ENST00000391834.6; ENST00000391835.1; ENST00000629179.1; ENST00000344175.9 | ||
| External Link | RMBase: m5C_site_25323 | ||
| mod ID: M5CSITE002110 | Click to Show/Hide the Full List | ||
| mod site | chr19:49874777-49874778:- | ||
| Sequence | GCGGTGTGCTTACTGCCTCCCGGAAGAGCGTCTTCCGCAGC | ||
| Cell/Tissue List | T24 | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000391833.5; ENST00000391830.1; ENST00000344175.9; ENST00000391835.1; ENST00000391832.7; ENST00000391834.6; ENST00000391831.5; ENST00000629179.1 | ||
| External Link | RMBase: m5C_site_25324 | ||
N6-methyladenosine (m6A)
| In total 48 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE042144 | Click to Show/Hide the Full List | ||
| mod site | chr19:49869307-49869308:- | [5] | |
| Sequence | CCCCTCAGGGATGGCCCCAAACTGTCCCTGCCTCTGGCACC | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HEK293T; Huh7 | ||
| Seq Type List | DART-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391832.7; ENST00000391835.1; ENST00000391831.5; ENST00000391834.6; ENST00000629179.1; ENST00000344175.9; ENST00000391833.5 | ||
| External Link | RMBase: m6A_site_449482 | ||
| mod ID: M6ASITE042145 | Click to Show/Hide the Full List | ||
| mod site | chr19:49869371-49869372:- | [6] | |
| Sequence | ACGTTCTTTACACTACGGGGACTGGGGTCGTCTTTGCCCAC | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000391832.7; ENST00000391835.1; ENST00000391833.5; ENST00000391834.6; ENST00000344175.9; ENST00000629179.1; ENST00000391831.5 | ||
| External Link | RMBase: m6A_site_449483 | ||
| mod ID: M6ASITE042146 | Click to Show/Hide the Full List | ||
| mod site | chr19:49869391-49869392:- | [5] | |
| Sequence | TGGCCCGGGGCCTTCAATTTACGTTCTTTACACTACGGGGA | ||
| Motif Score | 2.046785714 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000391835.1; ENST00000629179.1; ENST00000391834.6; ENST00000391833.5; ENST00000391831.5; ENST00000391832.7; ENST00000344175.9 | ||
| External Link | RMBase: m6A_site_449484 | ||
| mod ID: M6ASITE042147 | Click to Show/Hide the Full List | ||
| mod site | chr19:49869552-49869553:- | [6] | |
| Sequence | CTCCATCCCCTAGTCGCTGGACAGCTCTTTTTTTGATTGGC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000629179.1; ENST00000344175.9; ENST00000391831.5; ENST00000391835.1; ENST00000391834.6; ENST00000391832.7; ENST00000391833.5 | ||
| External Link | RMBase: m6A_site_449485 | ||
| mod ID: M6ASITE042148 | Click to Show/Hide the Full List | ||
| mod site | chr19:49869820-49869821:- | [7] | |
| Sequence | TAATCTGAGGCCGATCCGGGACCGGCCTCCTTGCGTCTCCC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000391833.5; ENST00000391834.6; ENST00000344175.9; ENST00000391831.5; ENST00000391835.1; ENST00000629179.1; ENST00000391832.7 | ||
| External Link | RMBase: m6A_site_449486 | ||
| mod ID: M6ASITE042149 | Click to Show/Hide the Full List | ||
| mod site | chr19:49869871-49869872:- | [5] | |
| Sequence | CCGCGTCCGCCCCGTCCCACACTACGCCCCCGCCCCACTCC | ||
| Motif Score | 2.506922619 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000629179.1; ENST00000344175.9; ENST00000391834.6; ENST00000391831.5; ENST00000391833.5; ENST00000391835.1; ENST00000391832.7 | ||
| External Link | RMBase: m6A_site_449487 | ||
| mod ID: M6ASITE042150 | Click to Show/Hide the Full List | ||
| mod site | chr19:49869992-49869993:- | [8] | |
| Sequence | GGTGCTGCGAGAGGCCGAGGACACCCAGGTCTTCGGGGACC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; A549; peripheral-blood | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000344175.9; ENST00000629179.1; ENST00000391834.6; ENST00000391832.7; ENST00000391833.5; ENST00000391835.1; ENST00000391831.5 | ||
| External Link | RMBase: m6A_site_449488 | ||
| mod ID: M6ASITE042151 | Click to Show/Hide the Full List | ||
| mod site | chr19:49870040-49870041:- | [8] | |
| Sequence | GCCCTCTTCGCCCGACCTGGACCGCATCGCGGCGAGCATGC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; A549; peripheral-blood; MM6 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000391834.6; ENST00000391835.1; ENST00000391831.5; ENST00000391832.7; ENST00000391833.5; ENST00000629179.1; ENST00000344175.9 | ||
| External Link | RMBase: m6A_site_449489 | ||
| mod ID: M6ASITE042152 | Click to Show/Hide the Full List | ||
| mod site | chr19:49871581-49871582:- | [8] | |
| Sequence | GGGGCTTCAAGGAGAAGAGGACAGAGGCGCGGTCATCAGAT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; A549; peripheral-blood; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000629179.1; ENST00000344175.9; ENST00000391832.7; ENST00000391831.5; ENST00000391833.5; ENST00000391834.6; ENST00000391835.1 | ||
| External Link | RMBase: m6A_site_449490 | ||
| mod ID: M6ASITE042153 | Click to Show/Hide the Full List | ||
| mod site | chr19:49871695-49871696:- | [8] | |
| Sequence | ATGGCAGCCTGAGCGAGGAGACCCCCGCCGGCCCCCCCACC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; U2OS; MT4; A549; H1299; MM6; Huh7; peripheral-blood; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391833.5; ENST00000391835.1; ENST00000391834.6; ENST00000629179.1; ENST00000344175.9; ENST00000391832.7; ENST00000391831.5 | ||
| External Link | RMBase: m6A_site_449491 | ||
| mod ID: M6ASITE042154 | Click to Show/Hide the Full List | ||
| mod site | chr19:49871828-49871829:- | [8] | |
| Sequence | TCCCCCCTTCTGTGAGTCAGACCCCGAGAGTACAGATGGTG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; U2OS; MT4; A549; H1299; MM6; Huh7; peripheral-blood; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391835.1; ENST00000391833.5; ENST00000391834.6; ENST00000391831.5; ENST00000344175.9; ENST00000629179.1; ENST00000391832.7 | ||
| External Link | RMBase: m6A_site_449492 | ||
| mod ID: M6ASITE042155 | Click to Show/Hide the Full List | ||
| mod site | chr19:49871852-49871853:- | [8] | |
| Sequence | TGAGGACGCCACCCTCCAGGACCTTCCCCCCTTCTGTGAGT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; U2OS; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; MSC; endometrial; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391835.1; ENST00000391833.5; ENST00000391834.6; ENST00000391831.5; ENST00000344175.9; ENST00000391832.7; ENST00000629179.1 | ||
| External Link | RMBase: m6A_site_449493 | ||
| mod ID: M6ASITE042156 | Click to Show/Hide the Full List | ||
| mod site | chr19:49872952-49872953:- | [8] | |
| Sequence | ATGAGCCCACAGAGACAGAGACCTCCGGGGAGCAGCTGGGC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; U2OS; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; MSC; endometrial; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391832.7; ENST00000391833.5; ENST00000391834.6; ENST00000629179.1; ENST00000344175.9; ENST00000391835.1; ENST00000391831.5 | ||
| External Link | RMBase: m6A_site_449494 | ||
| mod ID: M6ASITE042157 | Click to Show/Hide the Full List | ||
| mod site | chr19:49872958-49872959:- | [8] | |
| Sequence | ACGAGGATGAGCCCACAGAGACAGAGACCTCCGGGGAGCAG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; HepG2; U2OS; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; MSC; endometrial; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391834.6; ENST00000344175.9; ENST00000629179.1; ENST00000391832.7; ENST00000391831.5; ENST00000391835.1; ENST00000391833.5 | ||
| External Link | RMBase: m6A_site_449495 | ||
| mod ID: M6ASITE042158 | Click to Show/Hide the Full List | ||
| mod site | chr19:49872990-49872991:- | [8] | |
| Sequence | GCCTACCCTGGCCAGAGAGGACAACGAGGAGGACGAGGATG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; U2OS; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; MSC; endometrial; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000344175.9; ENST00000391833.5; ENST00000391834.6; ENST00000391831.5; ENST00000391835.1; ENST00000391830.1; ENST00000629179.1; ENST00000391832.7 | ||
| External Link | RMBase: m6A_site_449496 | ||
| mod ID: M6ASITE042159 | Click to Show/Hide the Full List | ||
| mod site | chr19:49873225-49873226:- | [8] | |
| Sequence | CTGAGCGCTTCCGGGCCCGGACTGGCACGGAGCTGGTGCTG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; A549; U2OS; H1A; H1B; HEK293T; fibroblasts; H1299; MM6; Jurkat; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000344175.9; ENST00000391834.6; ENST00000391830.1; ENST00000391832.7; ENST00000391835.1; ENST00000629179.1; ENST00000391831.5; ENST00000391833.5; ENST00000599525.1 | ||
| External Link | RMBase: m6A_site_449497 | ||
| mod ID: M6ASITE042160 | Click to Show/Hide the Full List | ||
| mod site | chr19:49873416-49873417:- | [8] | |
| Sequence | GGACACACAGCACCGCTGGGACAAGGTGGGTGGAGGGTGGT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; H1B; H1A; HEK293T; peripheral-blood; GSC-11; HEK293A-TOA; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000391835.1; ENST00000344175.9; ENST00000391832.7; ENST00000391833.5; ENST00000391834.6; ENST00000599525.1; ENST00000391831.5; ENST00000391830.1; ENST00000629179.1 | ||
| External Link | RMBase: m6A_site_449498 | ||
| mod ID: M6ASITE042161 | Click to Show/Hide the Full List | ||
| mod site | chr19:49873434-49873435:- | [8] | |
| Sequence | GAGTAGCAGGTTTGGGGAGGACACACAGCACCGCTGGGACA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; H1B; H1A; HEK293T; peripheral-blood; GSC-11; HEK293A-TOA; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000344175.9; ENST00000391830.1; ENST00000391833.5; ENST00000391832.7; ENST00000629179.1; ENST00000391831.5; ENST00000599525.1; ENST00000391834.6; ENST00000391835.1 | ||
| External Link | RMBase: m6A_site_449499 | ||
| mod ID: M6ASITE042162 | Click to Show/Hide the Full List | ||
| mod site | chr19:49873476-49873477:- | [8] | |
| Sequence | CAGGGTCTGGGCCTGCGAGGACTGGATGGTGAGAATCCTGG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; H1A; H1B; HEK293T; peripheral-blood; GSC-11; HEK293A-TOA; endometrial; MM6 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000344175.9; ENST00000391833.5; ENST00000391831.5; ENST00000391834.6; ENST00000629179.1; ENST00000391832.7; ENST00000599525.1; ENST00000391835.1; ENST00000391830.1 | ||
| External Link | RMBase: m6A_site_449500 | ||
| mod ID: M6ASITE042163 | Click to Show/Hide the Full List | ||
| mod site | chr19:49873625-49873626:- | [8] | |
| Sequence | TGCTAGGACTCTCTGCTAGGACTCCCTGCCTTTCCAGTACT | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; Huh7; HEK293A-TOA | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391835.1; ENST00000391832.7; ENST00000391833.5; ENST00000391831.5; ENST00000391830.1; ENST00000344175.9; ENST00000599525.1; ENST00000629179.1; ENST00000391834.6 | ||
| External Link | RMBase: m6A_site_449501 | ||
| mod ID: M6ASITE042164 | Click to Show/Hide the Full List | ||
| mod site | chr19:49873638-49873639:- | [8] | |
| Sequence | TTAGAGGCCTCTCTGCTAGGACTCTCTGCTAGGACTCCCTG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; Huh7; HEK293A-TOA | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000629179.1; ENST00000391832.7; ENST00000344175.9; ENST00000391834.6; ENST00000391835.1; ENST00000599525.1; ENST00000391831.5; ENST00000391833.5; ENST00000391830.1 | ||
| External Link | RMBase: m6A_site_449502 | ||
| mod ID: M6ASITE042165 | Click to Show/Hide the Full List | ||
| mod site | chr19:49873858-49873859:- | [8] | |
| Sequence | TGGAATTCTAAATTTTCTAGACACCATGTTAAAAGAGTAAA | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; H1B; H1A; peripheral-blood; HEK293A-TOA | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000391833.5; ENST00000391830.1; ENST00000391832.7; ENST00000391834.6; ENST00000391835.1; ENST00000391831.5; ENST00000344175.9; ENST00000629179.1 | ||
| External Link | RMBase: m6A_site_449503 | ||
| mod ID: M6ASITE042166 | Click to Show/Hide the Full List | ||
| mod site | chr19:49873949-49873950:- | [8] | |
| Sequence | CCCCCTGGGCCTTGTGCAGGACACTCTTGACGGGATGGCTG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; H1A; H1B; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391830.1; ENST00000391831.5; ENST00000391834.6; ENST00000391835.1; ENST00000391833.5; ENST00000629179.1; ENST00000344175.9; ENST00000391832.7 | ||
| External Link | RMBase: m6A_site_449504 | ||
| mod ID: M6ASITE042167 | Click to Show/Hide the Full List | ||
| mod site | chr19:49873970-49873971:- | [8] | |
| Sequence | CAGCTCCGGGTGCTGAAGGAACCCCCTGGGCCTTGTGCAGG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2; H1B; H1A; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391832.7; ENST00000391835.1; ENST00000391831.5; ENST00000391830.1; ENST00000391833.5; ENST00000344175.9; ENST00000629179.1; ENST00000391834.6 | ||
| External Link | RMBase: m6A_site_449505 | ||
| mod ID: M6ASITE042168 | Click to Show/Hide the Full List | ||
| mod site | chr19:49874010-49874011:- | [8] | |
| Sequence | CTCCAGGGCCTGCCCTGAGGACTATGGCGAGGAGTAGCATC | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; H1B; H1A; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391833.5; ENST00000629179.1; ENST00000344175.9; ENST00000391832.7; ENST00000391834.6; ENST00000391831.5; ENST00000391830.1; ENST00000391835.1 | ||
| External Link | RMBase: m6A_site_449506 | ||
| mod ID: M6ASITE042169 | Click to Show/Hide the Full List | ||
| mod site | chr19:49874041-49874042:- | [8] | |
| Sequence | AGGAGCTGGGGATGGCCAGAACACCTAGAGCCTCCAGGGCC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HEK293T; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; TREX; endometrial; HEC-1-A; GSCs | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391833.5; ENST00000391832.7; ENST00000344175.9; ENST00000629179.1; ENST00000391834.6; ENST00000391830.1; ENST00000391835.1; ENST00000391831.5 | ||
| External Link | RMBase: m6A_site_449507 | ||
| mod ID: M6ASITE042170 | Click to Show/Hide the Full List | ||
| mod site | chr19:49874124-49874125:- | [8] | |
| Sequence | ACAAGTCATCAAGGTCAGGGACCACGTTTTCTGAAGGCCTC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; peripheral-blood | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000344175.9; ENST00000391834.6; ENST00000391832.7; ENST00000391831.5; ENST00000391835.1; ENST00000391833.5; ENST00000629179.1; ENST00000391830.1 | ||
| External Link | RMBase: m6A_site_449508 | ||
| mod ID: M6ASITE042171 | Click to Show/Hide the Full List | ||
| mod site | chr19:49874217-49874218:- | [8] | |
| Sequence | TGGGACCCCCTATGGAGCAGACTGGCTGGATCTATGGGCGA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; peripheral-blood | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000391832.7; ENST00000391834.6; ENST00000344175.9; ENST00000629179.1; ENST00000391833.5; ENST00000391831.5; ENST00000391830.1; ENST00000391835.1 | ||
| External Link | RMBase: m6A_site_449509 | ||
| mod ID: M6ASITE042172 | Click to Show/Hide the Full List | ||
| mod site | chr19:49874233-49874234:- | [8] | |
| Sequence | GGCCACTCAGACAGTGTGGGACCCCCTATGGAGCAGACTGG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; peripheral-blood | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000629179.1; ENST00000391833.5; ENST00000391830.1; ENST00000391831.5; ENST00000391835.1; ENST00000391834.6; ENST00000391832.7; ENST00000344175.9 | ||
| External Link | RMBase: m6A_site_449510 | ||
| mod ID: M6ASITE042173 | Click to Show/Hide the Full List | ||
| mod site | chr19:49874243-49874244:- | [8] | |
| Sequence | CTGGGAAGGTGGCCACTCAGACAGTGTGGGACCCCCTATGG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; peripheral-blood; HEK293T | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000391831.5; ENST00000629179.1; ENST00000391835.1; ENST00000391830.1; ENST00000344175.9; ENST00000391833.5; ENST00000391832.7; ENST00000391834.6 | ||
| External Link | RMBase: m6A_site_449511 | ||
| mod ID: M6ASITE042174 | Click to Show/Hide the Full List | ||
| mod site | chr19:49874293-49874294:- | [8] | |
| Sequence | TCTGAGGCCTCAGTCATAGAACCAGCCAGTTCCCTCTGGAA | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; peripheral-blood; HEK293T; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000391830.1; ENST00000344175.9; ENST00000391831.5; ENST00000391834.6; ENST00000391832.7; ENST00000391835.1; ENST00000391833.5; ENST00000629179.1 | ||
| External Link | RMBase: m6A_site_449512 | ||
| mod ID: M6ASITE042175 | Click to Show/Hide the Full List | ||
| mod site | chr19:49874386-49874387:- | [8] | |
| Sequence | ACAACAGAGGACCTGCCAGAACAGTCTTGTAGGAAAAGCCG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; peripheral-blood; HEK293T; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000391834.6; ENST00000629179.1; ENST00000391832.7; ENST00000391830.1; ENST00000391835.1; ENST00000344175.9; ENST00000391833.5; ENST00000391831.5 | ||
| External Link | RMBase: m6A_site_449513 | ||
| mod ID: M6ASITE042176 | Click to Show/Hide the Full List | ||
| mod site | chr19:49874396-49874397:- | [8] | |
| Sequence | GGGATCAGGGACAACAGAGGACCTGCCAGAACAGTCTTGTA | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HEK293T | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000391830.1; ENST00000344175.9; ENST00000391832.7; ENST00000391834.6; ENST00000391831.5; ENST00000391835.1; ENST00000391833.5; ENST00000629179.1 | ||
| External Link | RMBase: m6A_site_449514 | ||
| mod ID: M6ASITE042177 | Click to Show/Hide the Full List | ||
| mod site | chr19:49874406-49874407:- | [8] | |
| Sequence | TGCACCCTGGGGGATCAGGGACAACAGAGGACCTGCCAGAA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HEK293T | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000344175.9; ENST00000391831.5; ENST00000391830.1; ENST00000391834.6; ENST00000391833.5; ENST00000391835.1; ENST00000629179.1; ENST00000391832.7 | ||
| External Link | RMBase: m6A_site_449515 | ||
| mod ID: M6ASITE042178 | Click to Show/Hide the Full List | ||
| mod site | chr19:49876683-49876684:- | [5] | |
| Sequence | TGCGGAGAGGAGGCGGGGCAACTGCGCGGACGTGACGCAAG | ||
| Motif Score | 2.595904762 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000391834.6; ENST00000629179.1; ENST00000391830.1; ENST00000391832.7; ENST00000344175.9; ENST00000482622.1; ENST00000391835.1 | ||
| External Link | RMBase: m6A_site_449516 | ||
| mod ID: M6ASITE042179 | Click to Show/Hide the Full List | ||
| mod site | chr19:49876999-49877000:- | [5] | |
| Sequence | GAGGGAGGGAGAGCCAATATACACTATGGGCTGATTAAGCC | ||
| Motif Score | 2.110482143 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000391835.1; ENST00000391834.6; ENST00000391832.7; ENST00000344175.9; ENST00000482622.1; ENST00000629179.1; ENST00000391830.1 | ||
| External Link | RMBase: m6A_site_449517 | ||
| mod ID: M6ASITE042180 | Click to Show/Hide the Full List | ||
| mod site | chr19:49877084-49877085:- | [8] | |
| Sequence | GCCATTTTGAAGCCTGGCAAACCGAAGCAAGAAATGCTGCC | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391835.1; ENST00000629179.1; ENST00000482622.1; ENST00000344175.9; ENST00000391830.1; ENST00000391834.6; ENST00000391832.7 | ||
| External Link | RMBase: m6A_site_449518 | ||
| mod ID: M6ASITE042181 | Click to Show/Hide the Full List | ||
| mod site | chr19:49877189-49877190:- | [5] | |
| Sequence | GCACTGAGGGACTCAGGATAACGGGATGAAGCCGTCAGTGC | ||
| Motif Score | 2.142029762 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000391830.1; ENST00000344175.9; ENST00000391835.1; ENST00000629179.1; ENST00000482622.1; ENST00000391834.6; ENST00000391832.7 | ||
| External Link | RMBase: m6A_site_449519 | ||
| mod ID: M6ASITE042182 | Click to Show/Hide the Full List | ||
| mod site | chr19:49877199-49877200:- | [8] | |
| Sequence | ACCACAAGAGGCACTGAGGGACTCAGGATAACGGGATGAAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq; m6A-CLIP/IP | ||
| Transcript ID List | ENST00000391832.7; ENST00000482622.1; ENST00000344175.9; ENST00000629179.1; ENST00000391830.1; ENST00000391835.1; ENST00000391834.6 | ||
| External Link | RMBase: m6A_site_449520 | ||
| mod ID: M6ASITE042183 | Click to Show/Hide the Full List | ||
| mod site | chr19:49877455-49877456:- | [8] | |
| Sequence | GCCCTCTCGCCACGAAGTAAACAAGTGGGAGGGTCTGAGAG | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; A549; GM12878; MM6; iSLK; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391835.1; ENST00000391830.1; ENST00000391834.6; ENST00000629179.1; ENST00000482622.1 | ||
| External Link | RMBase: m6A_site_449522 | ||
| mod ID: M6ASITE042184 | Click to Show/Hide the Full List | ||
| mod site | chr19:49877555-49877556:- | [8] | |
| Sequence | AAGGGGGTTATTCCACTGGAACCTCGAGGGTGGATCGGAGT | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; GM12878; MM6; HEK293A-TOA; iSLK; TREX; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000629179.1; ENST00000391830.1; ENST00000391834.6; ENST00000391835.1; ENST00000482622.1 | ||
| External Link | RMBase: m6A_site_449524 | ||
| mod ID: M6ASITE042185 | Click to Show/Hide the Full List | ||
| mod site | chr19:49877587-49877588:- | [8] | |
| Sequence | CTAGAGAAGGAGCGGGTGAAACCATTTTTCAGAAGGGGGTT | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; GM12878; MM6; HEK293A-TOA; iSLK; TREX; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391834.6; ENST00000391830.1; ENST00000629179.1; ENST00000391835.1; ENST00000482622.1 | ||
| External Link | RMBase: m6A_site_449525 | ||
| mod ID: M6ASITE042186 | Click to Show/Hide the Full List | ||
| mod site | chr19:49877631-49877632:- | [8] | |
| Sequence | ACAGTTCCCCTCCGGGCCGGACAGTGGTAGCGGCCCGACCC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; GM12878; GSC-11; HEK293A-TOA; TREX; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391830.1; ENST00000391835.1; ENST00000629179.1; ENST00000391834.6; ENST00000482622.1 | ||
| External Link | RMBase: m6A_site_449526 | ||
| mod ID: M6ASITE042187 | Click to Show/Hide the Full List | ||
| mod site | chr19:49877651-49877652:- | [8] | |
| Sequence | TGTTGTCACTTCCGGAGAAAACAGTTCCCCTCCGGGCCGGA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; GM12878; GSC-11; HEK293A-TOA; TREX; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000629179.1; ENST00000391835.1; ENST00000391834.6; ENST00000482622.1; ENST00000391830.1 | ||
| External Link | RMBase: m6A_site_449528 | ||
| mod ID: M6ASITE042188 | Click to Show/Hide the Full List | ||
| mod site | chr19:49878016-49878017:- | [9] | |
| Sequence | GGGAGGGCCATTGCCCCGGGACCAAGGCGGGGAGAATGGTC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | CD4T; GSC-11; iSLK; TIME; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391830.1; ENST00000482622.1; ENST00000629179.1; ENST00000391834.6; ENST00000391835.1 | ||
| External Link | RMBase: m6A_site_449529 | ||
| mod ID: M6ASITE042189 | Click to Show/Hide the Full List | ||
| mod site | chr19:49878293-49878294:- | [10] | |
| Sequence | AGCTGCCGCCTGCATCCCAGACCGCCTGCATCCCGCTCGGA | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | GSC-11; iSLK; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000391830.1; ENST00000629179.1; ENST00000391834.6; ENST00000482622.1 | ||
| External Link | RMBase: m6A_site_449532 | ||
| mod ID: M6ASITE042190 | Click to Show/Hide the Full List | ||
| mod site | chr19:49878321-49878322:- | [11] | |
| Sequence | ACTGCTGACCGCCAGACCAAACTCCTACAGCTGCCGCCTGC | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | iSLK; endometrial | ||
| Seq Type List | MeRIP-seq; m6A-seq | ||
| Transcript ID List | ENST00000629179.1; ENST00000391834.6; ENST00000391830.1; ENST00000482622.1 | ||
| External Link | RMBase: m6A_site_449533 | ||
| mod ID: M6ASITE042191 | Click to Show/Hide the Full List | ||
| mod site | chr19:49878326-49878327:- | [11] | |
| Sequence | GTCCCACTGCTGACCGCCAGACCAAACTCCTACAGCTGCCG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | iSLK; endometrial | ||
| Seq Type List | MeRIP-seq; m6A-seq | ||
| Transcript ID List | ENST00000629179.1; ENST00000391834.6; ENST00000482622.1; ENST00000391830.1 | ||
| External Link | RMBase: m6A_site_449534 | ||
Pseudouridine (Pseudo)
| In total 2 m6A sequence/site(s) in this target gene | |||
| mod ID: PSESITE000133 | Click to Show/Hide the Full List | ||
| mod site | chr19:49869642-49869643:- | [12] | |
| Sequence | AAGGGATTGGCTCGCTGAGTTCTAAGCTCTAAATGGGTCAA | ||
| Transcript ID List | ENST00000391831.5; ENST00000629179.1; ENST00000391834.6; ENST00000391835.1; ENST00000391833.5; ENST00000344175.9; ENST00000391832.7 | ||
| External Link | RMBase: Pseudo_site_2526 | ||
| mod ID: PSESITE000134 | Click to Show/Hide the Full List | ||
| mod site | chr19:49869643-49869644:- | [12] | |
| Sequence | TAAGGGATTGGCTCGCTGAGTTCTAAGCTCTAAATGGGTCA | ||
| Transcript ID List | ENST00000629179.1; ENST00000391834.6; ENST00000344175.9; ENST00000391835.1; ENST00000391833.5; ENST00000391831.5; ENST00000391832.7 | ||
| External Link | RMBase: Pseudo_site_2527 | ||
References

