General Information of the m6A Target Gene (ID: M6ATAR00367)
Target Name Serine/threonine-protein kinase PINK1, mitochondrial (PINK1)
Synonyms
BRPK; PTEN-induced putative kinase protein 1
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Gene Name PINK1
Chromosomal Location 1p36.12
Family protein kinase superfamily; Ser/Thr protein kinase family
Function
Serine/threonine-protein kinase which protects against mitochondrial dysfunction during cellular stress by phosphorylating mitochondrial proteins such as PRKN and DNM1L, to coordinate mitochondrial quality control mechanisms that remove and replace dysfunctional mitochondrial components . Depending on the severity of mitochondrial damage and/or dysfunction, activity ranges from preventing apoptosis and stimulating mitochondrial biogenesis to regulating mitochondrial dynamics and eliminating severely damaged mitochondria via mitophagy. Mediates the translocation and activation of PRKN at the outer membrane (OMM) of dysfunctional/depolarized mitochondria. At the OMM of damaged mitochondria, phosphorylates pre-existing polyubiquitin chains at 'Ser-65', the PINK1-phosphorylated polyubiquitin then recruits PRKN from the cytosol to the OMM where PRKN is fully activated by phosphorylation at 'Ser-65' by PINK1. In damaged mitochondria, mediates the decision between mitophagy or preventing apoptosis by promoting PRKN-dependent poly- or monoubiquitination of VDAC1; polyubiquitination of VDAC1 by PRKN promotes mitophagy, while monoubiquitination of VDAC1 by PRKN decreases mitochondrial calcium influx which ultimately inhibits apoptosis. When cellular stress results in irreversible mitochondrial damage, functions with PRKN to promote clearance of damaged mitochondria via selective autophagy (mitophagy) . The PINK1-PRKN pathway also promotes fission of damaged mitochondria by phosphorylating and thus promoting the PRKN-dependent degradation of mitochondrial proteins involved in fission such as MFN2. This prevents the refusion of unhealthy mitochondria with the mitochondrial network or initiates mitochondrial fragmentation facilitating their later engulfment by autophagosomes. Also promotes mitochondrial fission independently of PRKN and ATG7-mediated mitophagy, via the phosphorylation and activation of DNM1L. Regulates motility of damaged mitochondria by promoting the ubiquitination and subsequent degradation of MIRO1 and MIRO2; in motor neurons, this likely inhibits mitochondrial intracellular anterograde transport along the axons which probably increases the chance of the mitochondria undergoing mitophagy in the soma . Required for ubiquinone reduction by mitochondrial complex I by mediating phosphorylation of complex I subunit NDUFA10 (By similarity).
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Gene ID 65018
Uniprot ID
PINK1_HUMAN
HGNC ID
HGNC:14581
KEGG ID
hsa:65018
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
PINK1 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Disease
Lung cancer [ICD-11: 2C25]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response []
Response Summary In lung squamous cell carcinoma, seven m6A-related autophagy genes were screened to construct a prognostic model: CASP4, CDKN1A, DLC1, ITGB1, Serine/threonine-protein kinase PINK1, mitochondrial (PINK1), TP63, and EIF4EBP1.
Responsed Disease Lung squamous cell carcinoma [ICD-11: 2C25.2]
Pathway Response Autophagy hsa04140
Cell Process Cell proliferation and metastasis
Cell autophagy
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00367)
Serine/threonine-protein kinase PINK1, mitochondrial (PINK1)
Adenosine-to-Inosine editing (A-to-I)
In total 11 m6A sequence/site(s) in this target gene
mod ID: A2ISITE004828 Click to Show/Hide the Full List
mod site chr1:20640549-20640550:+ [2]
Sequence TGCTCAGAAAGCCTTCTCAAAGGGACAGTTTGTGCCACCTT
Transcript ID List ENST00000321556.5; ENST00000492302.1
External Link RMBase: RNA-editing_site_2184
mod ID: A2ISITE004838 Click to Show/Hide the Full List
mod site chr1:20646028-20646029:+ [3]
Sequence GACACCTGTAATCCCAACACTTTGGGAGGCTTGCTTGAGGA
Transcript ID List ENST00000321556.5; ENST00000492302.1; ENST00000400490.2; rmsk_43584
External Link RMBase: RNA-editing_site_2210
mod ID: A2ISITE004839 Click to Show/Hide the Full List
mod site chr1:20646100-20646101:+ [3]
Sequence GGGAAACAGAGTGAGATCCCTTCTCTACAAAAAAAAAATAT
Transcript ID List rmsk_43584; ENST00000321556.5; ENST00000492302.1; ENST00000400490.2
External Link RMBase: RNA-editing_site_2215
mod ID: A2ISITE004841 Click to Show/Hide the Full List
mod site chr1:20646186-20646187:+ [3]
Sequence CACCTGTAGCCCCAGCTACTTGGGAGGCTGAGGTCGGAGGA
Transcript ID List ENST00000321556.5; rmsk_43584; ENST00000400490.2; ENST00000492302.1
External Link RMBase: RNA-editing_site_2219
mod ID: A2ISITE004842 Click to Show/Hide the Full List
mod site chr1:20647194-20647195:+ [3]
Sequence GCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCACGC
Transcript ID List ENST00000321556.5; ENST00000492302.1; ENST00000400490.2
External Link RMBase: RNA-editing_site_2226
mod ID: A2ISITE004853 Click to Show/Hide the Full List
mod site chr1:20647949-20647950:+ [3]
Sequence AGCCTCCCGAGTAGCTGGGATACAGGCACACACCACCATGC
Transcript ID List ENST00000400490.2; ENST00000492302.1; ENST00000321556.5
External Link RMBase: RNA-editing_site_2249
mod ID: A2ISITE004855 Click to Show/Hide the Full List
mod site chr1:20649507-20649508:+ [3]
Sequence GACACGGTGGCTTACACCTATAATCACAGCACTTTGGGAGG
Transcript ID List ENST00000400490.2; ENST00000492302.1; rmsk_43592; ENST00000321556.5
External Link RMBase: RNA-editing_site_2252
mod ID: A2ISITE004857 Click to Show/Hide the Full List
mod site chr1:20649529-20649530:+ [3]
Sequence ATCACAGCACTTTGGGAGGCTGAGGCGGGTGGATCACTTGG
Transcript ID List ENST00000400490.2; ENST00000492302.1; rmsk_43592; ENST00000321556.5
External Link RMBase: RNA-editing_site_2255
mod ID: A2ISITE004858 Click to Show/Hide the Full List
mod site chr1:20649538-20649539:+ [3]
Sequence CTTTGGGAGGCTGAGGCGGGTGGATCACTTGGGACCAGGAG
Transcript ID List ENST00000492302.1; ENST00000400490.2; ENST00000321556.5; rmsk_43592
External Link RMBase: RNA-editing_site_2257
mod ID: A2ISITE004859 Click to Show/Hide the Full List
mod site chr1:20649616-20649617:+ [3]
Sequence TGTACTAAAAATACAAAAATTAGCTGAGTGTCGTGGCACAC
Transcript ID List ENST00000321556.5; ENST00000492302.1; rmsk_43592; ENST00000400490.2
External Link RMBase: RNA-editing_site_2261
mod ID: A2ISITE004912 Click to Show/Hide the Full List
mod site chr1:20649717-20649718:+ [3]
Sequence GAGGTTGCAGTGAGCCAAGATCGCGCCACTGCACTCTGGCC
Transcript ID List ENST00000492302.1; ENST00000321556.5; ENST00000400490.2; rmsk_43592
External Link RMBase: RNA-editing_site_2271
5-methylcytidine (m5C)
In total 2 m6A sequence/site(s) in this target gene
mod ID: M5CSITE000186 Click to Show/Hide the Full List
mod site chr1:20633488-20633489:+ [4]
Sequence CCCAAGTTTGTTGTGACCGGCGGGGGACGCCGGTGGTGGCG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000321556.5; rmsk_43555
External Link RMBase: m5C_site_1237
mod ID: M5CSITE000187 Click to Show/Hide the Full List
mod site chr1:20650538-20650539:+
Sequence ACAAGATGGTTGGCTGGCTCCTCCAACAATCGGCCGCCACT
Cell/Tissue List liver
Seq Type List Bisulfite-seq
Transcript ID List ENST00000321556.5; ENST00000492302.1; ENST00000400490.2
External Link RMBase: m5C_site_1238
N6-methyladenosine (m6A)
In total 44 m6A sequence/site(s) in this target gene
mod ID: M6ASITE001912 Click to Show/Hide the Full List
mod site chr1:20633700-20633701:+ [5]
Sequence CGTCCAGGCTGGGCCGCAGGACCGGGCGCGGAGCCTCGCAG
Motif Score 3.622404762
Cell/Tissue List HeLa; U2OS; GSC-11; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000622012.1; rmsk_43556; ENST00000321556.5
External Link RMBase: m6A_site_12011
mod ID: M6ASITE001913 Click to Show/Hide the Full List
mod site chr1:20633889-20633890:+ [5]
Sequence CTGGGCCTCATCGAGGAAAAACAGGCGGAGAGCCGGCGGGC
Motif Score 2.20572619
Cell/Tissue List HeLa; U2OS; HEK293T; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000321556.5
External Link RMBase: m6A_site_12012
mod ID: M6ASITE001914 Click to Show/Hide the Full List
mod site chr1:20637884-20637885:+ [5]
Sequence GCCGGGGCCTGACCCGTTGGACACGAGACGCTTGCAGGGCT
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; peripheral-blood
Seq Type List m6A-seq; DART-seq; MAZTER-seq
Transcript ID List ENST00000321556.5
External Link RMBase: m6A_site_12013
mod ID: M6ASITE001915 Click to Show/Hide the Full List
mod site chr1:20637982-20637983:+ [6]
Sequence TGTATGAAGCCACCATGCCTACATTGCCCCAGAACCTGGAG
Motif Score 2.078666667
Cell/Tissue List kidney; hESC-HEK293T
Seq Type List m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000321556.5
External Link RMBase: m6A_site_12014
mod ID: M6ASITE001916 Click to Show/Hide the Full List
mod site chr1:20637995-20637996:+ [5]
Sequence CATGCCTACATTGCCCCAGAACCTGGAGGTGACAAAGAGCA
Motif Score 2.930744048
Cell/Tissue List HeLa; peripheral-blood; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000321556.5
External Link RMBase: m6A_site_12015
mod ID: M6ASITE001917 Click to Show/Hide the Full List
mod site chr1:20638006-20638007:+ [7]
Sequence TGCCCCAGAACCTGGAGGTGACAAAGAGCACCGGGTTGCTT
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000321556.5
External Link RMBase: m6A_site_12016
mod ID: M6ASITE001918 Click to Show/Hide the Full List
mod site chr1:20638121-20638122:+ [5]
Sequence GGCCATCAAGATGATGTGGAACATCTCGGTAAGCACCAGGC
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T; CD4T; peripheral-blood; endometrial; HEC-1-A
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000321556.5
External Link RMBase: m6A_site_12017
mod ID: M6ASITE001919 Click to Show/Hide the Full List
mod site chr1:20638226-20638227:+ [5]
Sequence CAGGAAGTAGGTAGGAAAAGACAGATTATCCACAGGAAAGG
Motif Score 2.897386905
Cell/Tissue List HeLa; peripheral-blood; endometrial; HEC-1-A
Seq Type List m6A-seq
Transcript ID List ENST00000492302.1; ENST00000321556.5
External Link RMBase: m6A_site_12018
mod ID: M6ASITE001920 Click to Show/Hide the Full List
mod site chr1:20639919-20639920:+ [8]
Sequence CTCCAGCGAAGCCATCTTGAACACAATGAGCCAGGAGCTGG
Motif Score 2.951386905
Cell/Tissue List peripheral-blood; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000321556.5; ENST00000492302.1
External Link RMBase: m6A_site_12019
mod ID: M6ASITE001921 Click to Show/Hide the Full List
mod site chr1:20644513-20644514:+ [9]
Sequence TCCAAGAGAGGTCCCAAGCAACTAGCCCCTCACCCCAACAT
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000492302.1; ENST00000321556.5
External Link RMBase: m6A_site_12024
mod ID: M6ASITE001922 Click to Show/Hide the Full List
mod site chr1:20644530-20644531:+ [7]
Sequence GCAACTAGCCCCTCACCCCAACATCATCCGGGTTCTCCGCG
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000492302.1; ENST00000321556.5
External Link RMBase: m6A_site_12025
mod ID: M6ASITE001923 Click to Show/Hide the Full List
mod site chr1:20644593-20644594:+ [9]
Sequence GCTGCCAGGGGCCCTGGTCGACTACCCTGATGTGCTGCCCT
Motif Score 3.287565476
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000492302.1; ENST00000321556.5
External Link RMBase: m6A_site_12026
mod ID: M6ASITE001924 Click to Show/Hide the Full List
mod site chr1:20645594-20645595:+ [5]
Sequence GCGCCAGTACCTTTGTGTGAACACACCCAGCCCCCGCCTCG
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000400490.2; ENST00000321556.5; ENST00000492302.1
External Link RMBase: m6A_site_12027
mod ID: M6ASITE001925 Click to Show/Hide the Full List
mod site chr1:20645651-20645652:+ [5]
Sequence GCAGCTGCTGGAAGGCGTGGACCATCTGGTTCAACAGGGCA
Motif Score 3.622404762
Cell/Tissue List HeLa; peripheral-blood; HEK293T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000321556.5; ENST00000400490.2; ENST00000492302.1
External Link RMBase: m6A_site_12028
mod ID: M6ASITE001926 Click to Show/Hide the Full List
mod site chr1:20645664-20645665:+ [6]
Sequence GGCGTGGACCATCTGGTTCAACAGGGCATCGCGCACAGAGA
Motif Score 2.173910714
Cell/Tissue List liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000492302.1; ENST00000321556.5; ENST00000400490.2
External Link RMBase: m6A_site_12030
mod ID: M6ASITE001927 Click to Show/Hide the Full List
mod site chr1:20645678-20645679:+ [6]
Sequence GGTTCAACAGGGCATCGCGCACAGAGACCTGAAATCCGACA
Motif Score 2.830589286
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000400490.2; ENST00000492302.1; ENST00000321556.5
External Link RMBase: m6A_site_12031
mod ID: M6ASITE001928 Click to Show/Hide the Full List
mod site chr1:20645684-20645685:+ [5]
Sequence ACAGGGCATCGCGCACAGAGACCTGAAATCCGACAACATCC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; peripheral-blood; HEK293T; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000321556.5; ENST00000492302.1; ENST00000400490.2
External Link RMBase: m6A_site_12032
mod ID: M6ASITE001929 Click to Show/Hide the Full List
mod site chr1:20645717-20645718:+ [5]
Sequence CAACATCCTTGTGGAGCTGGACCCAGGTAGGAACCTGCTGC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; GM12878; peripheral-blood; HEK293T; MSC; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000492302.1; ENST00000321556.5; ENST00000400490.2
External Link RMBase: m6A_site_12033
mod ID: M6ASITE001996 Click to Show/Hide the Full List
mod site chr1:20648697-20648698:+ [5]
Sequence ATGTCCACTGAATGCAGGAGACTCGATGCCTTGTGATAACC
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; A549; HEK293T; H1A; H1B; fibroblasts; GM12878; MM6; Huh7; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000492302.1; ENST00000321556.5; ENST00000400490.2
External Link RMBase: m6A_site_12040
mod ID: M6ASITE002047 Click to Show/Hide the Full List
mod site chr1:20648829-20648830:+ [5]
Sequence ATGCAAGTCCTGTCACATAAACCAGGTGGTCTAAGCAGACC
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; fibroblasts; GM12878; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000400490.2; ENST00000321556.5; ENST00000492302.1
External Link RMBase: m6A_site_12045
mod ID: M6ASITE002068 Click to Show/Hide the Full List
mod site chr1:20648847-20648848:+ [5]
Sequence AAACCAGGTGGTCTAAGCAGACCCCTTCTGGGTCTGAGCCA
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; fibroblasts; GM12878; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000400490.2; ENST00000321556.5; ENST00000492302.1
External Link RMBase: m6A_site_12047
mod ID: M6ASITE002084 Click to Show/Hide the Full List
mod site chr1:20648897-20648898:+ [5]
Sequence CAAGCTCTGGGTTCCTTGGGACAGAGTTCAGATTAGCCCAT
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; fibroblasts; GM12878; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000400490.2; ENST00000321556.5; ENST00000492302.1
External Link RMBase: m6A_site_12050
mod ID: M6ASITE002085 Click to Show/Hide the Full List
mod site chr1:20648937-20648938:+ [5]
Sequence TGGATCAGGTGATGTGCAGGACATGAAAAGGTTAGATGGGC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; GM12878; peripheral-blood; HEK293A-TOA; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000321556.5; ENST00000492302.1; ENST00000400490.2
External Link RMBase: m6A_site_12052
mod ID: M6ASITE002095 Click to Show/Hide the Full List
mod site chr1:20649191-20649192:+ [10]
Sequence TCAGTGCCTCCAGACGTGAGACAGTTGGTGAGGGCACTGCT
Motif Score 2.897386905
Cell/Tissue List HepG2; peripheral-blood; HEK293T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000400490.2; ENST00000492302.1; ENST00000321556.5
External Link RMBase: m6A_site_12055
mod ID: M6ASITE002136 Click to Show/Hide the Full List
mod site chr1:20650435-20650436:+ [8]
Sequence CTTCCCTTCCTGTTGCAGAGACCATCTGCCCGAGTAGCCGC
Motif Score 2.876744048
Cell/Tissue List peripheral-blood; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000321556.5; ENST00000400490.2; ENST00000492302.1
External Link RMBase: m6A_site_12060
mod ID: M6ASITE002137 Click to Show/Hide the Full List
mod site chr1:20650486-20650487:+ [11]
Sequence CATCTAAGCCTCTGGGGTGAACATATTCTAGCCCTGAAGAA
Motif Score 2.951386905
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000492302.1; ENST00000400490.2; ENST00000321556.5
External Link RMBase: m6A_site_12061
mod ID: M6ASITE002138 Click to Show/Hide the Full List
mod site chr1:20650569-20650570:+ [6]
Sequence GGCCGCCACTTTGTTGGCCAACAGGCTCACAGAGAAGTGTT
Motif Score 2.173910714
Cell/Tissue List liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000400490.2; ENST00000492302.1; ENST00000321556.5
External Link RMBase: m6A_site_12062
mod ID: M6ASITE002139 Click to Show/Hide the Full List
mod site chr1:20650598-20650599:+ [7]
Sequence CAGAGAAGTGTTGTGTGGAAACAAAAATGAAGATGCTCTTT
Motif Score 2.20572619
Cell/Tissue List HEK293T; hESC-HEK293T; HeLa
Seq Type List MeRIP-seq; MAZTER-seq; m6A-seq
Transcript ID List ENST00000321556.5; ENST00000492302.1; ENST00000400490.2
External Link RMBase: m6A_site_12063
mod ID: M6ASITE002140 Click to Show/Hide the Full List
mod site chr1:20650716-20650717:+ [9]
Sequence CTGCATGGAGCTGGTGAATTACTAAAAGAACATGGCATCCT
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000321556.5; ENST00000400490.2; ENST00000492302.1
External Link RMBase: m6A_site_12065
mod ID: M6ASITE002141 Click to Show/Hide the Full List
mod site chr1:20650725-20650726:+ [5]
Sequence GCTGGTGAATTACTAAAAGAACATGGCATCCTCTGTGTCGT
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; liver; A549; hESC-HEK293T; HepG2; U2OS; hNPCs; hESCs; fibroblasts; H1299; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000492302.1; ENST00000400490.2; ENST00000321556.5
External Link RMBase: m6A_site_12066
mod ID: M6ASITE002142 Click to Show/Hide the Full List
mod site chr1:20650781-20650782:+ [5]
Sequence GTGAGGGTGGGAGTCAGGAGACAAGACAGCGCAGAGAGGGC
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1B; hNPCs; hESCs; fibroblasts; H1299; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000400490.2; ENST00000321556.5; ENST00000492302.1
External Link RMBase: m6A_site_12068
mod ID: M6ASITE002143 Click to Show/Hide the Full List
mod site chr1:20650786-20650787:+ [5]
Sequence GGTGGGAGTCAGGAGACAAGACAGCGCAGAGAGGGCTGGTT
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1B; hNPCs; hESCs; fibroblasts; H1299; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000321556.5; ENST00000492302.1; ENST00000400490.2
External Link RMBase: m6A_site_12069
mod ID: M6ASITE002144 Click to Show/Hide the Full List
mod site chr1:20650842-20650843:+ [5]
Sequence CGGGCTTGGCAAATGGAAGAACTTGAGTGAGAGTTCAGTCT
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1B; H1A; hNPCs; hESCs; fibroblasts; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000492302.1; ENST00000321556.5; ENST00000400490.2
External Link RMBase: m6A_site_12070
mod ID: M6ASITE002145 Click to Show/Hide the Full List
mod site chr1:20650881-20650882:+ [5]
Sequence CTGCAGTCCTCTGCTCACAGACATCTGAAAAGTGAATGGCC
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1B; H1A; hNPCs; hESCs; fibroblasts; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000321556.5; ENST00000400490.2; ENST00000492302.1
External Link RMBase: m6A_site_12074
mod ID: M6ASITE002146 Click to Show/Hide the Full List
mod site chr1:20650927-20650928:+ [5]
Sequence GGTCTAGTAGATGAGGCTGGACTGAGGAGGGGTAGGCCTGC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; Brain; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000400490.2; ENST00000321556.5; ENST00000492302.1
External Link RMBase: m6A_site_12076
mod ID: M6ASITE002157 Click to Show/Hide the Full List
mod site chr1:20650952-20650953:+ [6]
Sequence GGAGGGGTAGGCCTGCATCCACAGAGAGGATCCAGGCCAAG
Motif Score 2.053113095
Cell/Tissue List liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000321556.5; ENST00000400490.2; ENST00000492302.1
External Link RMBase: m6A_site_12077
mod ID: M6ASITE002178 Click to Show/Hide the Full List
mod site chr1:20651018-20651019:+ [6]
Sequence GGCTGTGACCTTTGCCCCTAACACGAGGAACTCGTTTGAAG
Motif Score 2.168095238
Cell/Tissue List kidney; hESC-HEK293T
Seq Type List m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000492302.1; ENST00000400490.2; ENST00000321556.5
External Link RMBase: m6A_site_12079
mod ID: M6ASITE002189 Click to Show/Hide the Full List
mod site chr1:20651027-20651028:+ [5]
Sequence CTTTGCCCCTAACACGAGGAACTCGTTTGAAGGGGGCAGCG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; Brain; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000321556.5; ENST00000400490.2; ENST00000492302.1
External Link RMBase: m6A_site_12080
mod ID: M6ASITE002209 Click to Show/Hide the Full List
mod site chr1:20651082-20651083:+ [5]
Sequence TGCCACCTGGATGAAGGCAGACATCAACATGGGTCAGCACG
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hESCs; fibroblasts; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000400490.2; ENST00000321556.5; ENST00000492302.1
External Link RMBase: m6A_site_12082
mod ID: M6ASITE002210 Click to Show/Hide the Full List
mod site chr1:20651088-20651089:+ [9]
Sequence CTGGATGAAGGCAGACATCAACATGGGTCAGCACGTTCAGT
Motif Score 2.173910714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000492302.1; ENST00000400490.2; ENST00000321556.5
External Link RMBase: m6A_site_12083
mod ID: M6ASITE002211 Click to Show/Hide the Full List
mod site chr1:20651126-20651127:+ [7]
Sequence AGTTACGGGAGTGGGAAATTACATGAGGCCTGGGCCTCTGC
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000321556.5; ENST00000492302.1; ENST00000400490.2
External Link RMBase: m6A_site_12084
mod ID: M6ASITE002212 Click to Show/Hide the Full List
mod site chr1:20651169-20651170:+ [12]
Sequence TCCCAAGCTGTGCGTTCTGGACCAGCTACTGAATTATTAAT
Motif Score 3.622404762
Cell/Tissue List CD34; HeLa; A549; HEK293T; HepG2; U2OS; H1A; H1B; H1299; peripheral-blood; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000492302.1; ENST00000400490.2; ENST00000321556.5
External Link RMBase: m6A_site_12085
mod ID: M6ASITE002213 Click to Show/Hide the Full List
mod site chr1:20651207-20651208:+ [9]
Sequence AATCTCACTTAGCGAAAGTGACGGATGAGCAGTAAGTAAGT
Motif Score 2.833690476
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000492302.1; ENST00000321556.5; ENST00000400490.2
External Link RMBase: m6A_site_12086
mod ID: M6ASITE002214 Click to Show/Hide the Full List
mod site chr1:20651244-20651245:+ [13]
Sequence AAGTAAGTGTGGGGATTTAAACTTGAGGGTTTCCCTCCTGA
Motif Score 2.627720238
Cell/Tissue List HeLa; A549
Seq Type List MeRIP-seq
Transcript ID List ENST00000400490.2; ENST00000321556.5; ENST00000492302.1
External Link RMBase: m6A_site_12087
Pseudouridine (Pseudo)
In total 1 m6A sequence/site(s) in this target gene
mod ID: PSESITE000305 Click to Show/Hide the Full List
mod site chr1:20637905-20637906:+ [14]
Sequence CACGAGACGCTTGCAGGGCTTTCGGCTGGAGGAGTATCTGA
Transcript ID List ENST00000321556.5
External Link RMBase: Pseudo_site_73