m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR00275)
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
HINT2
can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
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YTH domain-containing family protein 1 (YTHDF1) [READER]
| Representative RNA-seq result indicating the expression of this target gene regulated by YTHDF1 | ||
| Cell Line | AGS cell line | Homo sapiens |
|
Treatment: shYTHDF1 AGS
Control: shControl AGS
|
GSE159425 | |
| Regulation |
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logFC: 8.82E-01 p-value: 1.64E-04 |
| More Results | Click to View More RNA-seq Results | |
| In total 1 item(s) under this regulator | ||||
| Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene | [1] | |||
| Response Summary | YTHDF1 promoted the translation of methylated Adenosine 5'-monophosphoramidase HINT2 (HINT2) mRNA, a tumor suppressor in ocular melanoma. | |||
| Target Regulation | Up regulation | |||
| Responsed Disease | Melanoma | ICD-11: 2C30 | ||
| In-vitro Model | CM2005.1 | Conjunctival melanoma | Homo sapiens | CVCL_M592 |
| CRMM-1 | Conjunctival melanoma | Homo sapiens | CVCL_M593 | |
| HEK293T | Normal | Homo sapiens | CVCL_0063 | |
| OCM-1 | Amelanotic melanoma | Homo sapiens | CVCL_6934 | |
| OCM-1A | Amelanotic melanoma | Homo sapiens | CVCL_6935 | |
| OM431 | Uveal melanoma | Homo sapiens | CVCL_J308 | |
| PIG1 | Normal | Homo sapiens | CVCL_S410 | |
| In-vivo Model | Approximately 1 × 106 melanoma cells from each group were injected subcutaneously into the right side of the abdomen of BALB/c nude mice (male, 6 weeks old). | |||
Melanoma [ICD-11: 2C30]
| In total 1 item(s) under this disease | ||||
| Experiment 1 Reporting the m6A-centered Disease Response | [1] | |||
| Response Summary | YTHDF1 promoted the translation of methylated Adenosine 5'-monophosphoramidase HINT2 (HINT2) mRNA, a tumor suppressor in ocular melanoma. | |||
| Responsed Disease | Melanoma [ICD-11: 2C30] | |||
| Target Regulator | YTH domain-containing family protein 1 (YTHDF1) | READER | ||
| Target Regulation | Up regulation | |||
| In-vitro Model | CM2005.1 | Conjunctival melanoma | Homo sapiens | CVCL_M592 |
| CRMM-1 | Conjunctival melanoma | Homo sapiens | CVCL_M593 | |
| HEK293T | Normal | Homo sapiens | CVCL_0063 | |
| OCM-1 | Amelanotic melanoma | Homo sapiens | CVCL_6934 | |
| OCM-1A | Amelanotic melanoma | Homo sapiens | CVCL_6935 | |
| OM431 | Uveal melanoma | Homo sapiens | CVCL_J308 | |
| PIG1 | Normal | Homo sapiens | CVCL_S410 | |
| In-vivo Model | Approximately 1 × 106 melanoma cells from each group were injected subcutaneously into the right side of the abdomen of BALB/c nude mice (male, 6 weeks old). | |||
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00275)
| In total 2 m6A sequence/site(s) in this target gene | |||
| mod ID: M5CSITE004395 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813073-35813074:- | [2] | |
| Sequence | ATGTACTTGGGGGCCGGCAGCTCCAGTGGCCTCCAGGTTGA | ||
| Cell/Tissue List | liver | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000472085.5; ENST00000471774.5; ENST00000474908.5; ENST00000474848.6; ENST00000259667.6; ENST00000461169.1; ENST00000490578.1; ENST00000650284.1 | ||
| External Link | RMBase: m5C_site_42506 | ||
| mod ID: M5CSITE004396 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813713-35813714:- | [2] | |
| Sequence | GCAGGCAACTCCTGGGGGAGCAGCCCCAACCATCTTCTCCC | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000472085.5; ENST00000461169.1; ENST00000474908.5; ENST00000259667.6; ENST00000474848.6; ENST00000490578.1; ENST00000650284.1 | ||
| External Link | RMBase: m5C_site_42507 | ||
N6-methyladenosine (m6A)
| In total 28 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE087976 | Click to Show/Hide the Full List | ||
| mod site | chr9:35812973-35812974:- | [3] | |
| Sequence | GACCCTGTGATGCTAATAAAACTGTTCTCCCTTAATTATGC | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HEK293T; A549; hESCs; Jurkat; HEK293A-TOA | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000490578.1; ENST00000471774.5; ENST00000474908.5; ENST00000650284.1; ENST00000461169.1; ENST00000259667.6; ENST00000474848.6; ENST00000472085.5 | ||
| External Link | RMBase: m6A_site_821345 | ||
| mod ID: M6ASITE087977 | Click to Show/Hide the Full List | ||
| mod site | chr9:35812992-35812993:- | [3] | |
| Sequence | GGATGGAAAGGGAAAAATGGACCCTGTGATGCTAATAAAAC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HEK293T; A549; hESCs; HEK293A-TOA | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000461169.1; ENST00000471774.5; ENST00000474848.6; ENST00000259667.6; ENST00000490578.1; ENST00000472085.5; ENST00000474908.5; ENST00000650284.1 | ||
| External Link | RMBase: m6A_site_821346 | ||
| mod ID: M6ASITE087978 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813025-35813026:- | [3] | |
| Sequence | AACTGATTAAAGGACACCAGACTCTGGATGCTTGGATGGAA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HEK293T; hESCs; A549; HEK293A-TOA | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000472085.5; ENST00000474848.6; ENST00000461169.1; ENST00000259667.6; ENST00000474908.5; ENST00000471774.5; ENST00000490578.1; ENST00000650284.1 | ||
| External Link | RMBase: m6A_site_821347 | ||
| mod ID: M6ASITE087979 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813032-35813033:- | [3] | |
| Sequence | ACCTGCCAACTGATTAAAGGACACCAGACTCTGGATGCTTG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HEK293T; hESC-HEK293T; hESCs; A549; HEK293A-TOA | ||
| Seq Type List | m6A-seq; MeRIP-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000461169.1; ENST00000490578.1; ENST00000259667.6; ENST00000474848.6; ENST00000474908.5; ENST00000471774.5; ENST00000472085.5; ENST00000650284.1 | ||
| External Link | RMBase: m6A_site_821348 | ||
| mod ID: M6ASITE087980 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813052-35813053:- | [3] | |
| Sequence | TCCAGTGGCCTCCAGGTTGAACCTGCCAACTGATTAAAGGA | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HEK293T; hESCs; A549; HEK293A-TOA; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000490578.1; ENST00000461169.1; ENST00000474908.5; ENST00000471774.5; ENST00000472085.5; ENST00000259667.6; ENST00000650284.1; ENST00000474848.6 | ||
| External Link | RMBase: m6A_site_821349 | ||
| mod ID: M6ASITE087982 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813099-35813100:- | [4] | |
| Sequence | ACAATCTGTGTATCATCTGCACATTCATGTACTTGGGGGCC | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000490578.1; ENST00000474848.6; ENST00000461169.1; ENST00000259667.6; ENST00000471774.5; ENST00000650284.1; ENST00000474908.5; ENST00000472085.5 | ||
| External Link | RMBase: m6A_site_821350 | ||
| mod ID: M6ASITE087983 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813119-35813120:- | [4] | |
| Sequence | AACGATGGGAAGCTGGGTGCACAATCTGTGTATCATCTGCA | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000472085.5; ENST00000650284.1; ENST00000471774.5; ENST00000474848.6; ENST00000461169.1; ENST00000259667.6; ENST00000474908.5; ENST00000490578.1 | ||
| External Link | RMBase: m6A_site_821351 | ||
| mod ID: M6ASITE087984 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813189-35813190:- | [5] | |
| Sequence | AATATGATCTTCATTCTTCGACCTCTGCCATGATCCTGACT | ||
| Motif Score | 2.844928571 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000472085.5; ENST00000650284.1; ENST00000474848.6; ENST00000471774.5; ENST00000474908.5; ENST00000490578.1; ENST00000461169.1; ENST00000259667.6 | ||
| External Link | RMBase: m6A_site_821352 | ||
| mod ID: M6ASITE087985 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813304-35813305:- | [6] | |
| Sequence | TACTCCTTGTGGCCAAGCAGACAGCAAAGGCTGAGGGCCTG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | peripheral-blood; endometrial; NB4 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000461169.1; ENST00000472085.5; ENST00000471774.5; ENST00000474848.6; ENST00000650284.1; ENST00000259667.6; ENST00000490578.1; ENST00000474908.5 | ||
| External Link | RMBase: m6A_site_821353 | ||
| mod ID: M6ASITE087986 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813329-35813330:- | [3] | |
| Sequence | CTCTCTCTATAGCTTCTAGGACACCTACTCCTTGTGGCCAA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; hESC-HEK293T; peripheral-blood; endometrial | ||
| Seq Type List | m6A-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000474908.5; ENST00000650284.1; ENST00000474848.6; ENST00000471774.5; ENST00000490578.1; ENST00000472085.5; ENST00000461169.1; ENST00000259667.6 | ||
| External Link | RMBase: m6A_site_821354 | ||
| mod ID: M6ASITE087987 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813400-35813401:- | [3] | |
| Sequence | TGGCTGGGAGGAGCCCCTGGACCCAGCTAGAGGTCTTGCTC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000461169.1; ENST00000471774.5; ENST00000474848.6; ENST00000472085.5; ENST00000259667.6; ENST00000490578.1; ENST00000650284.1; ENST00000474908.5 | ||
| External Link | RMBase: m6A_site_821355 | ||
| mod ID: M6ASITE087988 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813434-35813435:- | [3] | |
| Sequence | AAGACCAGCAGGTGGGAAGAACAGGGCCAGGGTTTGGCTGG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000259667.6; ENST00000461169.1; ENST00000490578.1; ENST00000472085.5; ENST00000471774.5; ENST00000474848.6; ENST00000474908.5; ENST00000650284.1 | ||
| External Link | RMBase: m6A_site_821356 | ||
| mod ID: M6ASITE087989 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813451-35813452:- | [3] | |
| Sequence | TAGCCAGGCTGAAGAAGAAGACCAGCAGGTGGGAAGAACAG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; peripheral-blood; HEK293T; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000259667.6; ENST00000461169.1; ENST00000472085.5; ENST00000471774.5; ENST00000474908.5; ENST00000474848.6; ENST00000490578.1; ENST00000650284.1 | ||
| External Link | RMBase: m6A_site_821357 | ||
| mod ID: M6ASITE087990 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813626-35813627:- | [3] | |
| Sequence | GCAGGTGGGGTGCTCTTAGGACCTATCCCCTTAGGAATGTT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; A549; Jurkat; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; MM6 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000650284.1; ENST00000259667.6; ENST00000474908.5; ENST00000490578.1; ENST00000461169.1; ENST00000471774.5; ENST00000472085.5; ENST00000474848.6 | ||
| External Link | RMBase: m6A_site_821358 | ||
| mod ID: M6ASITE087991 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813650-35813651:- | [3] | |
| Sequence | AGCTGACATTCTCTATGAGGACCAGCAGGTGGGGTGCTCTT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; A549; Jurkat; peripheral-blood; GSC-11; HEK293T; iSLK; endometrial; HEC-1-A; GSCs; MM6 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000259667.6; ENST00000650284.1; ENST00000472085.5; ENST00000474908.5; ENST00000474848.6; ENST00000471774.5; ENST00000461169.1; ENST00000490578.1 | ||
| External Link | RMBase: m6A_site_821359 | ||
| mod ID: M6ASITE087993 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813665-35813666:- | [4] | |
| Sequence | GGACAAGAGCCTCCCAGCTGACATTCTCTATGAGGACCAGC | ||
| Motif Score | 2.859755952 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000474848.6; ENST00000259667.6; ENST00000474908.5; ENST00000650284.1; ENST00000471774.5; ENST00000490578.1; ENST00000461169.1; ENST00000472085.5 | ||
| External Link | RMBase: m6A_site_821360 | ||
| mod ID: M6ASITE087994 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813683-35813684:- | [3] | |
| Sequence | CATCTTCTCCCGGATCCTGGACAAGAGCCTCCCAGCTGACA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; A549; U2OS; MM6; Jurkat; peripheral-blood; GSC-11; HEK293T; iSLK; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000474848.6; ENST00000471774.5; ENST00000650284.1; ENST00000472085.5; ENST00000461169.1; ENST00000474908.5; ENST00000490578.1; ENST00000259667.6 | ||
| External Link | RMBase: m6A_site_821361 | ||
| mod ID: M6ASITE087995 | Click to Show/Hide the Full List | ||
| mod site | chr9:35813896-35813897:- | [3] | |
| Sequence | TGGTGCTCTGAAATTCAGGAACTTTCCTCCTGGGTGGGAAC | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; H1A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000259667.6; ENST00000474848.6; ENST00000472085.5; ENST00000650284.1; ENST00000461169.1; ENST00000474908.5 | ||
| External Link | RMBase: m6A_site_821362 | ||
| mod ID: M6ASITE087996 | Click to Show/Hide the Full List | ||
| mod site | chr9:35814013-35814014:- | ||
| Sequence | AACAGTGCTATATTTCGTGGACACATGAGCAGGAATCAATT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000474848.6; ENST00000474908.5; ENST00000472085.5; ENST00000650284.1; ENST00000461169.1; ENST00000259667.6 | ||
| External Link | RMBase: m6A_site_821363 | ||
| mod ID: M6ASITE087997 | Click to Show/Hide the Full List | ||
| mod site | chr9:35814032-35814033:- | ||
| Sequence | ATTCTAGATCCTTTCCCTAAACAGTGCTATATTTCGTGGAC | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000474908.5; ENST00000461169.1; ENST00000474848.6; ENST00000650284.1; ENST00000259667.6; ENST00000472085.5 | ||
| External Link | RMBase: m6A_site_821364 | ||
| mod ID: M6ASITE087998 | Click to Show/Hide the Full List | ||
| mod site | chr9:35814234-35814235:- | [7] | |
| Sequence | CAAGGCTTAAAGATCAGAAAACAAGTAACGGAAATAAGTGG | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000650284.1; ENST00000474908.5; ENST00000259667.6; ENST00000461169.1; ENST00000474848.6; ENST00000472085.5 | ||
| External Link | RMBase: m6A_site_821365 | ||
| mod ID: M6ASITE087999 | Click to Show/Hide the Full List | ||
| mod site | chr9:35814262-35814263:- | [7] | |
| Sequence | TGCATTAAAACTTAAATAAAACAGGCGACAAGGCTTAAAGA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000474848.6; ENST00000650284.1; ENST00000472085.5; ENST00000259667.6; ENST00000474908.5; ENST00000461169.1 | ||
| External Link | RMBase: m6A_site_821366 | ||
| mod ID: M6ASITE088000 | Click to Show/Hide the Full List | ||
| mod site | chr9:35814273-35814274:- | [7] | |
| Sequence | AACAGGGCGATTGCATTAAAACTTAAATAAAACAGGCGACA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000650284.1; ENST00000472085.5; ENST00000474908.5; ENST00000461169.1; ENST00000474848.6; ENST00000259667.6 | ||
| External Link | RMBase: m6A_site_821367 | ||
| mod ID: M6ASITE088001 | Click to Show/Hide the Full List | ||
| mod site | chr9:35814675-35814676:- | [3] | |
| Sequence | GCCGGGGCGCCGAGGTCGGGACAGGGTCAGTGCAGCGGCTG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HEK293T | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000474848.6; ENST00000472085.5; ENST00000650284.1; ENST00000461169.1; ENST00000474908.5; ENST00000259667.6 | ||
| External Link | RMBase: m6A_site_821368 | ||
| mod ID: M6ASITE088002 | Click to Show/Hide the Full List | ||
| mod site | chr9:35814743-35814744:- | [3] | |
| Sequence | GGGCTGTGTGGTGAGGTCGAACTGGTGGCTCCGGAGAACGA | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HEK293T | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000650284.1; ENST00000472085.5; ENST00000474848.6; ENST00000474908.5; ENST00000461169.1; ENST00000259667.6 | ||
| External Link | RMBase: m6A_site_821369 | ||
| mod ID: M6ASITE088004 | Click to Show/Hide the Full List | ||
| mod site | chr9:35815218-35815219:- | [3] | |
| Sequence | CACACGGACTAGAAGACGAAACCAATGGAATGGAAAATTGT | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; HEK293T; H1B; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000474908.5; ENST00000650284.1; ENST00000474848.6 | ||
| External Link | RMBase: m6A_site_821375 | ||
| mod ID: M6ASITE088005 | Click to Show/Hide the Full List | ||
| mod site | chr9:35815231-35815232:- | [3] | |
| Sequence | GGAAAAGAACGTTCACACGGACTAGAAGACGAAACCAATGG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HEK293T; H1B; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000474848.6; ENST00000650284.1; ENST00000474908.5 | ||
| External Link | RMBase: m6A_site_821376 | ||
| mod ID: M6ASITE088006 | Click to Show/Hide the Full List | ||
| mod site | chr9:35815271-35815272:- | [7] | |
| Sequence | GAAGTTTCTCTCACAGAGAAACTAGTAAGGGGATCCAATGG | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HEK293T; Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000650284.1; ENST00000474908.5; ENST00000474848.6 | ||
| External Link | RMBase: m6A_site_821377 | ||
References

