m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00113)
Target Name Small nucleolar RNA host gene 4 (SNHG4)
Synonyms
SNHG4; small nucleolar RNA host gene 4 (non-protein coding); U19H; NCRNA00059; non-protein coding RNA 59
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Gene Name SNHG4
Chromosomal Location 5q31.2
Family Small nucleolar RNA non-coding host genes
Gene ID 724102
HGNC ID
HGNC:32964
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
SNHG4 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Disease
Liver cancer [ICD-11: 2C12]
 Disease Info 
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response []
Response Summary The study demonstrated that the 9 m6A-related lncRNA signature serves as a novel predictor in the prognosis of hepatocellular Carcinoma and optimize (ICIs) therapy. Small nucleolar RNA host gene 4 (SNHG4) plays an oncogenic role in hepatocellular Carcinoma.
Responsed Disease Hepatocellular carcinoma [ICD-11: 2C12.02]
In-vitro Model ()
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RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00113)
Small nucleolar RNA host gene 4 (SNHG4)
Adenosine-to-Inosine editing (A-to-I)
In total 10 m6A sequence/site(s) in this target gene
mod ID: A2ISITE000992 Click to Show/Hide the Full List
mod site chr5:139274654-139274655:+ [1]
Sequence AAATTATAATGGTGACTGTGAGGCCGGGCGCGTGGCTCACG
Transcript ID List ENST00000514694.5; ENST00000506188.5; ENST00000361059.7; ENST00000505522.6; ENST00000502929.5; ENST00000509644.5; ENST00000507197.5; ENST00000394800.6; ENST00000514110.5; ENST00000508735.5; ENST00000507692.5; ENST00000505016.2; ENST00000513259.5; ENST00000506147.5; ENST00000448190.6; ENST00000509990.5; ENST00000504203.5; ENST00000648842.1; ENST00000512107.5
External Link RMBase: RNA-editing_site_112106
mod ID: A2ISITE000993 Click to Show/Hide the Full List
mod site chr5:139282848-139282849:+ [2]
Sequence TTTTTGTTTGTTTGTTTTTGAGACGGAGTCTCTGTCATCCA
Transcript ID List ENST00000505522.6; ENST00000502394.1; ENST00000514694.5; ENST00000506188.5; ENST00000512107.5; ENST00000509644.5; ENST00000506147.5; ENST00000509990.5; ENST00000507197.5; ENST00000394800.6; ENST00000505016.2; ENST00000502929.5; ENST00000504203.5; ENST00000361059.7
External Link RMBase: RNA-editing_site_112107
mod ID: A2ISITE000994 Click to Show/Hide the Full List
mod site chr5:139282894-139282895:+ [2]
Sequence GAGTGCAATGTAATGGCTCAATCTCAGCTCACTGCAACCTC
Transcript ID List ENST00000361059.7; ENST00000502929.5; ENST00000505522.6; ENST00000502394.1; ENST00000507197.5; ENST00000394800.6; ENST00000509990.5; ENST00000504203.5; ENST00000505016.2; ENST00000509644.5; ENST00000512107.5; ENST00000506147.5; ENST00000506188.5; ENST00000514694.5
External Link RMBase: RNA-editing_site_112108
mod ID: A2ISITE000995 Click to Show/Hide the Full List
mod site chr5:139282929-139282930:+ [2]
Sequence AACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGC
Transcript ID List ENST00000509644.5; ENST00000507197.5; ENST00000502929.5; ENST00000509990.5; ENST00000512107.5; ENST00000505522.6; ENST00000514694.5; ENST00000506147.5; ENST00000502394.1; ENST00000506188.5; ENST00000361059.7; ENST00000504203.5; ENST00000394800.6; ENST00000505016.2
External Link RMBase: RNA-editing_site_112109
mod ID: A2ISITE000996 Click to Show/Hide the Full List
mod site chr5:139282930-139282931:+ [2]
Sequence ACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCC
Transcript ID List ENST00000502394.1; ENST00000505522.6; ENST00000509644.5; ENST00000504203.5; ENST00000507197.5; ENST00000514694.5; ENST00000394800.6; ENST00000505016.2; ENST00000512107.5; ENST00000506188.5; ENST00000509990.5; ENST00000506147.5; ENST00000502929.5; ENST00000361059.7
External Link RMBase: RNA-editing_site_112110
mod ID: A2ISITE000997 Click to Show/Hide the Full List
mod site chr5:139284445-139284446:+ [2]
Sequence ACCCCGTCTCTACAAAAGAAAAAAATACAAAAATTAGCTGG
Transcript ID List ENST00000502394.1; ENST00000505522.6; ENST00000504203.5; ENST00000509990.5; ENST00000512107.5; ENST00000514694.5; ENST00000502929.5; ENST00000505016.2; ENST00000509644.5; ENST00000361059.7; ENST00000394800.6; rmsk_1762149; ENST00000506147.5
External Link RMBase: RNA-editing_site_112111
mod ID: A2ISITE000998 Click to Show/Hide the Full List
mod site chr5:139284487-139284488:+ [3]
Sequence TGTTGTGGTGTATGCCTGTAATCCCAACTATTTGGGTGGCT
Transcript ID List ENST00000514694.5; ENST00000505522.6; ENST00000502929.5; ENST00000509644.5; ENST00000394800.6; ENST00000509990.5; ENST00000361059.7; ENST00000506147.5; rmsk_1762149; ENST00000512107.5; ENST00000505016.2; ENST00000502394.1; ENST00000504203.5
External Link RMBase: RNA-editing_site_112112
mod ID: A2ISITE000999 Click to Show/Hide the Full List
mod site chr5:139284493-139284494:+ [3]
Sequence GGTGTATGCCTGTAATCCCAACTATTTGGGTGGCTGAGGCA
Transcript ID List ENST00000505522.6; ENST00000504203.5; ENST00000509990.5; ENST00000505016.2; ENST00000506147.5; ENST00000509644.5; ENST00000502929.5; ENST00000512107.5; ENST00000502394.1; ENST00000394800.6; ENST00000361059.7; rmsk_1762149; ENST00000514694.5
External Link RMBase: RNA-editing_site_112113
mod ID: A2ISITE001000 Click to Show/Hide the Full List
mod site chr5:139284535-139284536:+ [3]
Sequence GAGAATCGCTTGAACTTGGAAGGCAGAGGTTGCAGTGAGCT
Transcript ID List ENST00000394800.6; ENST00000361059.7; rmsk_1762149; ENST00000509990.5; ENST00000514694.5; ENST00000502929.5; ENST00000509644.5; ENST00000502394.1; ENST00000504203.5; ENST00000505522.6; ENST00000512107.5; ENST00000505016.2; ENST00000506147.5
External Link RMBase: RNA-editing_site_112114
mod ID: A2ISITE001001 Click to Show/Hide the Full List
mod site chr5:139284539-139284540:+ [3]
Sequence ATCGCTTGAACTTGGAAGGCAGAGGTTGCAGTGAGCTGAGA
Transcript ID List ENST00000505522.6; ENST00000506147.5; ENST00000361059.7; ENST00000505016.2; ENST00000504203.5; ENST00000502929.5; ENST00000502394.1; ENST00000509990.5; ENST00000512107.5; ENST00000509644.5; rmsk_1762149; ENST00000394800.6; ENST00000514694.5
External Link RMBase: RNA-editing_site_112115
5-methylcytidine (m5C)
In total 26 m6A sequence/site(s) in this target gene
mod ID: M5CSITE003588 Click to Show/Hide the Full List
mod site chr5:139279612-139279613:+
Sequence TCCTGGGTTCAAGCGATTCTCCTGCCTCGGCCTCCTGAGTA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000394800.6; ENST00000506147.5; ENST00000514694.5; ENST00000509990.5; ENST00000502394.1; ENST00000504203.5; ENST00000448190.6; ENST00000505522.6; ENST00000361059.7; ENST00000502929.5; ENST00000506188.5; ENST00000505016.2; ENST00000648842.1; ENST00000507197.5; ENST00000509644.5; ENST00000513259.5; ENST00000512107.5
External Link RMBase: m5C_site_35901
mod ID: M5CSITE003589 Click to Show/Hide the Full List
mod site chr5:139279613-139279614:+
Sequence CCTGGGTTCAAGCGATTCTCCTGCCTCGGCCTCCTGAGTAG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504203.5; ENST00000506188.5; ENST00000512107.5; ENST00000505522.6; ENST00000509990.5; ENST00000648842.1; ENST00000502929.5; ENST00000509644.5; ENST00000506147.5; ENST00000502394.1; ENST00000448190.6; ENST00000505016.2; ENST00000394800.6; ENST00000361059.7; ENST00000513259.5; ENST00000507197.5; ENST00000514694.5
External Link RMBase: m5C_site_35902
mod ID: M5CSITE003590 Click to Show/Hide the Full List
mod site chr5:139279616-139279617:+
Sequence GGGTTCAAGCGATTCTCCTGCCTCGGCCTCCTGAGTAGCTG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000513259.5; ENST00000506188.5; ENST00000505016.2; ENST00000507197.5; ENST00000361059.7; ENST00000502394.1; ENST00000509644.5; ENST00000506147.5; ENST00000504203.5; ENST00000648842.1; ENST00000509990.5; ENST00000512107.5; ENST00000394800.6; ENST00000514694.5; ENST00000502929.5; ENST00000505522.6; ENST00000448190.6
External Link RMBase: m5C_site_35903
mod ID: M5CSITE003591 Click to Show/Hide the Full List
mod site chr5:139279617-139279618:+
Sequence GGTTCAAGCGATTCTCCTGCCTCGGCCTCCTGAGTAGCTGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000506188.5; ENST00000648842.1; ENST00000502929.5; ENST00000506147.5; ENST00000512107.5; ENST00000505522.6; ENST00000513259.5; ENST00000504203.5; ENST00000394800.6; ENST00000505016.2; ENST00000507197.5; ENST00000514694.5; ENST00000509644.5; ENST00000448190.6; ENST00000502394.1; ENST00000361059.7; ENST00000509990.5
External Link RMBase: m5C_site_35904
mod ID: M5CSITE003592 Click to Show/Hide the Full List
mod site chr5:139279619-139279620:+
Sequence TTCAAGCGATTCTCCTGCCTCGGCCTCCTGAGTAGCTGGGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000648842.1; ENST00000505016.2; ENST00000505522.6; ENST00000509644.5; ENST00000514694.5; ENST00000512107.5; ENST00000506147.5; ENST00000504203.5; ENST00000448190.6; ENST00000509990.5; ENST00000502394.1; ENST00000507197.5; ENST00000394800.6; ENST00000502929.5; ENST00000361059.7; ENST00000513259.5; ENST00000506188.5
External Link RMBase: m5C_site_35905
mod ID: M5CSITE003593 Click to Show/Hide the Full List
mod site chr5:139279622-139279623:+
Sequence AAGCGATTCTCCTGCCTCGGCCTCCTGAGTAGCTGGGATTA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000448190.6; ENST00000509990.5; ENST00000512107.5; ENST00000507197.5; ENST00000361059.7; ENST00000505522.6; ENST00000394800.6; ENST00000506188.5; ENST00000502394.1; ENST00000505016.2; ENST00000509644.5; ENST00000502929.5; ENST00000504203.5; ENST00000648842.1; ENST00000513259.5; ENST00000506147.5; ENST00000514694.5
External Link RMBase: m5C_site_35906
mod ID: M5CSITE003594 Click to Show/Hide the Full List
mod site chr5:139279623-139279624:+
Sequence AGCGATTCTCCTGCCTCGGCCTCCTGAGTAGCTGGGATTAT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000506188.5; ENST00000502929.5; ENST00000448190.6; ENST00000505522.6; ENST00000648842.1; ENST00000502394.1; ENST00000504203.5; ENST00000509644.5; ENST00000507197.5; ENST00000509990.5; ENST00000505016.2; ENST00000394800.6; ENST00000506147.5; ENST00000513259.5; ENST00000361059.7; ENST00000512107.5; ENST00000514694.5
External Link RMBase: m5C_site_35907
mod ID: M5CSITE003595 Click to Show/Hide the Full List
mod site chr5:139279625-139279626:+
Sequence CGATTCTCCTGCCTCGGCCTCCTGAGTAGCTGGGATTATAG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000506147.5; ENST00000506188.5; ENST00000507197.5; ENST00000509990.5; ENST00000448190.6; ENST00000505522.6; ENST00000505016.2; ENST00000361059.7; ENST00000513259.5; ENST00000502394.1; ENST00000502929.5; ENST00000394800.6; ENST00000509644.5; ENST00000648842.1; ENST00000504203.5; ENST00000514694.5; ENST00000512107.5
External Link RMBase: m5C_site_35908
mod ID: M5CSITE003596 Click to Show/Hide the Full List
mod site chr5:139279626-139279627:+
Sequence GATTCTCCTGCCTCGGCCTCCTGAGTAGCTGGGATTATAGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000506188.5; ENST00000514694.5; ENST00000507197.5; ENST00000509644.5; ENST00000361059.7; ENST00000505016.2; ENST00000512107.5; ENST00000648842.1; ENST00000394800.6; ENST00000502929.5; ENST00000513259.5; ENST00000448190.6; ENST00000506147.5; ENST00000504203.5; ENST00000509990.5; ENST00000502394.1; ENST00000505522.6
External Link RMBase: m5C_site_35909
mod ID: M5CSITE003597 Click to Show/Hide the Full List
mod site chr5:139279634-139279635:+
Sequence TGCCTCGGCCTCCTGAGTAGCTGGGATTATAGGCGTGCACT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504203.5; ENST00000361059.7; ENST00000513259.5; ENST00000648842.1; ENST00000394800.6; ENST00000509644.5; ENST00000512107.5; ENST00000506147.5; ENST00000448190.6; ENST00000502394.1; ENST00000506188.5; ENST00000505522.6; ENST00000505016.2; ENST00000514694.5; ENST00000509990.5; ENST00000502929.5; ENST00000507197.5
External Link RMBase: m5C_site_35910
mod ID: M5CSITE003598 Click to Show/Hide the Full List
mod site chr5:139281402-139281403:+
Sequence CCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000506147.5; ENST00000502929.5; ENST00000506188.5; ENST00000507197.5; ENST00000394800.6; ENST00000361059.7; ENST00000504203.5; ENST00000502394.1; ENST00000505522.6; ENST00000509644.5; ENST00000509990.5; ENST00000514694.5; ENST00000505016.2; ENST00000512107.5
External Link RMBase: m5C_site_35911
mod ID: M5CSITE003599 Click to Show/Hide the Full List
mod site chr5:139281404-139281405:+
Sequence CAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAACC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000502394.1; ENST00000509644.5; ENST00000514694.5; ENST00000505016.2; ENST00000361059.7; ENST00000394800.6; ENST00000506188.5; ENST00000505522.6; ENST00000502929.5; ENST00000512107.5; ENST00000507197.5; ENST00000506147.5; ENST00000509990.5; ENST00000504203.5
External Link RMBase: m5C_site_35912
mod ID: M5CSITE003600 Click to Show/Hide the Full List
mod site chr5:139281408-139281409:+
Sequence CTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAACCTCCA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000361059.7; ENST00000506147.5; ENST00000509644.5; ENST00000512107.5; ENST00000509990.5; ENST00000505522.6; ENST00000514694.5; ENST00000507197.5; ENST00000504203.5; ENST00000502929.5; ENST00000505016.2; ENST00000506188.5; ENST00000502394.1; ENST00000394800.6
External Link RMBase: m5C_site_35913
mod ID: M5CSITE003601 Click to Show/Hide the Full List
mod site chr5:139281410-139281411:+
Sequence GGAGTGCAGTGGCACGATCTCAGCTCACTGCAACCTCCACC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000506188.5; ENST00000394800.6; ENST00000505016.2; ENST00000507197.5; ENST00000509644.5; ENST00000361059.7; ENST00000512107.5; ENST00000504203.5; ENST00000506147.5; ENST00000509990.5; ENST00000514694.5; ENST00000505522.6; ENST00000502929.5; ENST00000502394.1
External Link RMBase: m5C_site_35914
mod ID: M5CSITE003602 Click to Show/Hide the Full List
mod site chr5:139281413-139281414:+
Sequence GTGCAGTGGCACGATCTCAGCTCACTGCAACCTCCACCTCC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000502394.1; ENST00000509990.5; ENST00000506147.5; ENST00000514694.5; ENST00000502929.5; ENST00000506188.5; ENST00000512107.5; ENST00000505522.6; ENST00000509644.5; ENST00000504203.5; ENST00000505016.2; ENST00000394800.6; ENST00000507197.5; ENST00000361059.7
External Link RMBase: m5C_site_35915
mod ID: M5CSITE003603 Click to Show/Hide the Full List
mod site chr5:139281415-139281416:+
Sequence GCAGTGGCACGATCTCAGCTCACTGCAACCTCCACCTCCTG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000509644.5; ENST00000507197.5; ENST00000504203.5; ENST00000502394.1; ENST00000512107.5; ENST00000509990.5; ENST00000502929.5; ENST00000505016.2; ENST00000506188.5; ENST00000505522.6; ENST00000506147.5; ENST00000514694.5; ENST00000361059.7; ENST00000394800.6
External Link RMBase: m5C_site_35916
mod ID: M5CSITE003604 Click to Show/Hide the Full List
mod site chr5:139281417-139281418:+
Sequence AGTGGCACGATCTCAGCTCACTGCAACCTCCACCTCCTGGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000512107.5; ENST00000361059.7; ENST00000514694.5; ENST00000502929.5; ENST00000509990.5; ENST00000506188.5; ENST00000505522.6; ENST00000509644.5; ENST00000504203.5; ENST00000506147.5; ENST00000394800.6; ENST00000507197.5; ENST00000502394.1; ENST00000505016.2
External Link RMBase: m5C_site_35917
mod ID: M5CSITE003605 Click to Show/Hide the Full List
mod site chr5:139281420-139281421:+
Sequence GGCACGATCTCAGCTCACTGCAACCTCCACCTCCTGGGTTC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000509644.5; ENST00000394800.6; ENST00000507197.5; ENST00000505016.2; ENST00000512107.5; ENST00000506188.5; ENST00000502929.5; ENST00000509990.5; ENST00000504203.5; ENST00000514694.5; ENST00000505522.6; ENST00000502394.1; ENST00000361059.7; ENST00000506147.5
External Link RMBase: m5C_site_35918
mod ID: M5CSITE003606 Click to Show/Hide the Full List
mod site chr5:139284565-139284566:+
Sequence TGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504203.5; ENST00000505016.2; ENST00000509644.5; rmsk_1762149; ENST00000361059.7; ENST00000509990.5; ENST00000514694.5; ENST00000505522.6; ENST00000502394.1; ENST00000506147.5; ENST00000502929.5; ENST00000512107.5; ENST00000394800.6
External Link RMBase: m5C_site_35919
mod ID: M5CSITE003607 Click to Show/Hide the Full List
mod site chr5:139284566-139284567:+
Sequence GCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGTG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List rmsk_1762149; ENST00000394800.6; ENST00000504203.5; ENST00000514694.5; ENST00000502929.5; ENST00000505016.2; ENST00000502394.1; ENST00000512107.5; ENST00000509644.5; ENST00000509990.5; ENST00000505522.6; ENST00000506147.5; ENST00000361059.7
External Link RMBase: m5C_site_35920
mod ID: M5CSITE003608 Click to Show/Hide the Full List
mod site chr5:139284568-139284569:+
Sequence AGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGTGAC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000506147.5; ENST00000504203.5; ENST00000505016.2; ENST00000361059.7; ENST00000512107.5; ENST00000502929.5; ENST00000505522.6; rmsk_1762149; ENST00000514694.5; ENST00000509990.5; ENST00000502394.1; ENST00000509644.5; ENST00000394800.6
External Link RMBase: m5C_site_35921
mod ID: M5CSITE003609 Click to Show/Hide the Full List
mod site chr5:139284571-139284572:+
Sequence GAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000509990.5; ENST00000509644.5; ENST00000505016.2; rmsk_1762149; ENST00000394800.6; ENST00000505522.6; ENST00000361059.7; ENST00000502394.1; ENST00000512107.5; ENST00000506147.5; ENST00000514694.5; ENST00000502929.5; ENST00000504203.5
External Link RMBase: m5C_site_35922
mod ID: M5CSITE003610 Click to Show/Hide the Full List
mod site chr5:139284573-139284574:+
Sequence GCTGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGACT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000505016.2; ENST00000506147.5; ENST00000504203.5; ENST00000512107.5; ENST00000505522.6; ENST00000509644.5; ENST00000509990.5; ENST00000394800.6; ENST00000514694.5; ENST00000361059.7; ENST00000502394.1; ENST00000502929.5; rmsk_1762149
External Link RMBase: m5C_site_35923
mod ID: M5CSITE003611 Click to Show/Hide the Full List
mod site chr5:139284575-139284576:+
Sequence TGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGACTGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000504203.5; ENST00000506147.5; ENST00000512107.5; ENST00000502394.1; ENST00000509990.5; rmsk_1762149; ENST00000394800.6; ENST00000509644.5; ENST00000502929.5; ENST00000514694.5; ENST00000505016.2; ENST00000505522.6; ENST00000361059.7
External Link RMBase: m5C_site_35924
mod ID: M5CSITE003612 Click to Show/Hide the Full List
mod site chr5:139284576-139284577:+
Sequence GAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGACTGAG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000509644.5; ENST00000506147.5; ENST00000505016.2; ENST00000394800.6; ENST00000361059.7; ENST00000514694.5; ENST00000502929.5; ENST00000509990.5; ENST00000502394.1; ENST00000512107.5; ENST00000505522.6; ENST00000504203.5; rmsk_1762149
External Link RMBase: m5C_site_35925
mod ID: M5CSITE003613 Click to Show/Hide the Full List
mod site chr5:139284580-139284581:+
Sequence TCGTGCCACTGCACTCCAGCCTGGGTGACAGACTGAGACAG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000502394.1; ENST00000512107.5; rmsk_1762149; ENST00000394800.6; ENST00000509990.5; ENST00000502929.5; ENST00000361059.7; ENST00000509644.5; ENST00000506147.5; ENST00000505522.6; ENST00000505016.2; ENST00000514694.5; ENST00000504203.5
External Link RMBase: m5C_site_35926
N6-methyladenosine (m6A)
In total 23 m6A sequence/site(s) in this target gene
mod ID: M6ASITE071157 Click to Show/Hide the Full List
mod site chr5:139276241-139276242:+ [4]
Sequence AGTGTTACACTGCTGGGAGAACAGCAGCCAATAGCTGGTTG
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000508735.5; ENST00000502394.1; ENST00000513259.5; ENST00000509644.5; ENST00000514110.5; ENST00000448190.6; ENST00000502929.5; ENST00000507692.5; ENST00000506147.5; ENST00000361059.7; ENST00000394800.6; ENST00000505016.2; ENST00000514694.5; ENST00000504203.5; ENST00000507197.5; ENST00000512107.5; ENST00000516404.1; ENST00000505522.6; ENST00000509990.5; ENST00000648842.1; ENST00000506188.5
External Link RMBase: m6A_site_687060
mod ID: M6ASITE071158 Click to Show/Hide the Full List
mod site chr5:139278847-139278848:+ [4]
Sequence TTACACTGTTGGAAGAGCAAACACTGTCTTTATTGAGGTTT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000512107.5; ENST00000648842.1; ENST00000509990.5; ENST00000505522.6; ENST00000509644.5; ENST00000508735.5; ENST00000364089.1; ENST00000505016.2; ENST00000504203.5; ENST00000502394.1; ENST00000507692.5; ENST00000513259.5; ENST00000514110.5; ENST00000506147.5; ENST00000394800.6; ENST00000361059.7; ENST00000507197.5; ENST00000506188.5; ENST00000514694.5; ENST00000448190.6; ENST00000502929.5
External Link RMBase: m6A_site_687061
mod ID: M6ASITE071159 Click to Show/Hide the Full List
mod site chr5:139278973-139278974:+ [4]
Sequence TGATCCTAGTCTGGGTGCAAACAATTTTTTTCTGTTTGCAG
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000648842.1; ENST00000506188.5; ENST00000509990.5; ENST00000508735.5; ENST00000448190.6; ENST00000514110.5; ENST00000506147.5; ENST00000361059.7; ENST00000394800.6; ENST00000509644.5; ENST00000512107.5; ENST00000514694.5; ENST00000513259.5; ENST00000507197.5; ENST00000507692.5; ENST00000505522.6; ENST00000502394.1; ENST00000364089.1; ENST00000502929.5; ENST00000505016.2; ENST00000504203.5
External Link RMBase: m6A_site_687062
mod ID: M6ASITE071160 Click to Show/Hide the Full List
mod site chr5:139279085-139279086:+ [4]
Sequence TGACATCTACCTCCATCAGGACCCCAGATGTCTGACAGCCC
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000509990.5; ENST00000514110.5; ENST00000504203.5; ENST00000507692.5; ENST00000448190.6; ENST00000509644.5; ENST00000506188.5; ENST00000507197.5; ENST00000361059.7; ENST00000648842.1; ENST00000502929.5; ENST00000512107.5; ENST00000394800.6; ENST00000505522.6; ENST00000508735.5; ENST00000514694.5; ENST00000505016.2; ENST00000506147.5; ENST00000502394.1; ENST00000513259.5
External Link RMBase: m6A_site_687063
mod ID: M6ASITE071161 Click to Show/Hide the Full List
mod site chr5:139279192-139279193:+ [4]
Sequence AGCTCAGATGGGGGTAGGGGACTTAAAATTATGATGTGAAA
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000506188.5; ENST00000514694.5; ENST00000514110.5; ENST00000513259.5; ENST00000505016.2; ENST00000361059.7; ENST00000506147.5; ENST00000505522.6; ENST00000507197.5; ENST00000512107.5; ENST00000394800.6; ENST00000502394.1; ENST00000648842.1; ENST00000509990.5; ENST00000504203.5; ENST00000509644.5; ENST00000448190.6; ENST00000507692.5; ENST00000502929.5
External Link RMBase: m6A_site_687064
mod ID: M6ASITE071162 Click to Show/Hide the Full List
mod site chr5:139279231-139279232:+ [4]
Sequence AAAATTATGTAGAGTATCAGACTTTTTTTTGGGGGGGGACG
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000507692.5; ENST00000502929.5; ENST00000505522.6; ENST00000514110.5; ENST00000361059.7; ENST00000514694.5; ENST00000506147.5; ENST00000513259.5; ENST00000509990.5; ENST00000502394.1; ENST00000509644.5; ENST00000504203.5; ENST00000394800.6; ENST00000505016.2; ENST00000648842.1; ENST00000448190.6; ENST00000512107.5; ENST00000507197.5; ENST00000506188.5
External Link RMBase: m6A_site_687065
mod ID: M6ASITE071163 Click to Show/Hide the Full List
mod site chr5:139279960-139279961:+ [4]
Sequence GCTGCTGACTACCCTATTGGACAACTCCAATATTAGAGAAC
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000361059.7; ENST00000394800.6; ENST00000504203.5; ENST00000505016.2; ENST00000513259.5; ENST00000507197.5; ENST00000514694.5; ENST00000648842.1; ENST00000502394.1; ENST00000505522.6; ENST00000509990.5; ENST00000509644.5; ENST00000502929.5; ENST00000512107.5; ENST00000506188.5; ENST00000506147.5
External Link RMBase: m6A_site_687066
mod ID: M6ASITE071164 Click to Show/Hide the Full List
mod site chr5:139279979-139279980:+ [4]
Sequence GACAACTCCAATATTAGAGAACATTTCCACCAATTCAGAAA
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000506188.5; ENST00000505016.2; ENST00000394800.6; ENST00000509990.5; ENST00000507197.5; ENST00000505522.6; ENST00000361059.7; ENST00000502929.5; ENST00000502394.1; ENST00000513259.5; ENST00000514694.5; ENST00000504203.5; ENST00000509644.5; ENST00000512107.5; ENST00000648842.1; ENST00000506147.5
External Link RMBase: m6A_site_687067
mod ID: M6ASITE071165 Click to Show/Hide the Full List
mod site chr5:139280039-139280040:+ [4]
Sequence TCTAGAGCAGGGATCAGCAAACTTGCTGTAAAGAGCCAGGT
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000502929.5; ENST00000505522.6; ENST00000513259.5; ENST00000504203.5; ENST00000509990.5; ENST00000648842.1; ENST00000514694.5; ENST00000505016.2; ENST00000394800.6; ENST00000512107.5; ENST00000361059.7; ENST00000509644.5; ENST00000507197.5; ENST00000506188.5; ENST00000506147.5; ENST00000502394.1
External Link RMBase: m6A_site_687068
mod ID: M6ASITE071166 Click to Show/Hide the Full List
mod site chr5:139280123-139280124:+ [4]
Sequence TTTTTGCAGCTCTAGTGCAAACACAGCCTTAGACAATATCA
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000509990.5; ENST00000509644.5; ENST00000361059.7; ENST00000514694.5; ENST00000648842.1; ENST00000502929.5; ENST00000506147.5; ENST00000394800.6; ENST00000502394.1; ENST00000504203.5; ENST00000507197.5; ENST00000505522.6; ENST00000505016.2; ENST00000506188.5; ENST00000512107.5
External Link RMBase: m6A_site_687069
mod ID: M6ASITE071167 Click to Show/Hide the Full List
mod site chr5:139280135-139280136:+ [4]
Sequence TAGTGCAAACACAGCCTTAGACAATATCAACACATGAGCAA
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000502929.5; ENST00000509990.5; ENST00000512107.5; ENST00000504203.5; ENST00000502394.1; ENST00000648842.1; ENST00000506188.5; ENST00000505016.2; ENST00000361059.7; ENST00000506147.5; ENST00000505522.6; ENST00000514694.5; ENST00000394800.6; ENST00000509644.5; ENST00000507197.5
External Link RMBase: m6A_site_687070
mod ID: M6ASITE071168 Click to Show/Hide the Full List
mod site chr5:139280174-139280175:+ [4]
Sequence AAGTCTATAGTTCTAATAGAACATTATTTATGGACACTGAA
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000505016.2; ENST00000502929.5; ENST00000505522.6; ENST00000506188.5; ENST00000507197.5; ENST00000502394.1; ENST00000509644.5; ENST00000648842.1; ENST00000509990.5; ENST00000361059.7; ENST00000512107.5; ENST00000514694.5; ENST00000504203.5; ENST00000394800.6; ENST00000506147.5
External Link RMBase: m6A_site_687071
mod ID: M6ASITE071169 Click to Show/Hide the Full List
mod site chr5:139280187-139280188:+ [4]
Sequence TAATAGAACATTATTTATGGACACTGAATTAGAATTTCATA
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000502929.5; ENST00000509990.5; ENST00000509644.5; ENST00000506147.5; ENST00000505522.6; ENST00000506188.5; ENST00000504203.5; ENST00000505016.2; ENST00000512107.5; ENST00000648842.1; ENST00000514694.5; ENST00000507197.5; ENST00000502394.1; ENST00000394800.6; ENST00000361059.7
External Link RMBase: m6A_site_687072
mod ID: M6ASITE071170 Click to Show/Hide the Full List
mod site chr5:139282797-139282798:+ [4]
Sequence TGGCCATGACAGCTTCTTAGACTTGTTTTTAATGACCTTGA
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000502929.5; ENST00000502394.1; ENST00000394800.6; ENST00000509990.5; ENST00000514694.5; ENST00000507197.5; ENST00000505016.2; ENST00000505522.6; ENST00000361059.7; ENST00000509644.5; ENST00000506188.5; ENST00000512107.5; ENST00000506147.5; ENST00000504203.5
External Link RMBase: m6A_site_687073
mod ID: M6ASITE071171 Click to Show/Hide the Full List
mod site chr5:139283193-139283194:+ [4]
Sequence AGGGAGAAGCCAAGCCCAGAACTAAGGGTTCTGATGAGTTG
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000504203.5; ENST00000502929.5; ENST00000505522.6; ENST00000509990.5; ENST00000507197.5; ENST00000394800.6; ENST00000506147.5; ENST00000361059.7; ENST00000512107.5; ENST00000505016.2; ENST00000514694.5; ENST00000509644.5; ENST00000502394.1
External Link RMBase: m6A_site_687074
mod ID: M6ASITE071172 Click to Show/Hide the Full List
mod site chr5:139283552-139283553:+ [4]
Sequence GCCGTCATTTAATTTCCCAGACACTTGACCTCCTTCTGATT
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000512107.5; ENST00000506147.5; ENST00000505522.6; ENST00000514694.5; ENST00000505016.2; ENST00000504203.5; ENST00000394800.6; ENST00000509644.5; ENST00000502394.1; ENST00000361059.7; ENST00000509990.5; ENST00000502929.5
External Link RMBase: m6A_site_687075
mod ID: M6ASITE071173 Click to Show/Hide the Full List
mod site chr5:139283644-139283645:+ [4]
Sequence ATTACTTATCTTGCCAGAAGACTCAAAGGGTTTATGGCTTT
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000505016.2; ENST00000509644.5; ENST00000514694.5; ENST00000512107.5; ENST00000361059.7; ENST00000394800.6; ENST00000506147.5; ENST00000504203.5; ENST00000502394.1; ENST00000502929.5; ENST00000505522.6; ENST00000509990.5
External Link RMBase: m6A_site_687076
mod ID: M6ASITE071174 Click to Show/Hide the Full List
mod site chr5:139283675-139283676:+ [4]
Sequence TTATGGCTTTTACTAACTGAACTCTATGCTAGATGTTAGGG
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000505016.2; ENST00000394800.6; ENST00000512107.5; ENST00000505522.6; ENST00000502929.5; ENST00000504203.5; ENST00000509990.5; ENST00000361059.7; ENST00000502394.1; ENST00000506147.5; ENST00000514694.5; ENST00000509644.5
External Link RMBase: m6A_site_687077
mod ID: M6ASITE071175 Click to Show/Hide the Full List
mod site chr5:139283712-139283713:+ [4]
Sequence AGGGATAAATGGTTAACAGGACACAGTTCTTGCTTATCTTG
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000505522.6; ENST00000509644.5; ENST00000514694.5; ENST00000361059.7; ENST00000504203.5; ENST00000394800.6; ENST00000506147.5; ENST00000512107.5; ENST00000502929.5; ENST00000505016.2; ENST00000509990.5; ENST00000502394.1
External Link RMBase: m6A_site_687078
mod ID: M6ASITE071176 Click to Show/Hide the Full List
mod site chr5:139283999-139284000:+ [4]
Sequence ATGTTGTACCATAGAGCTAGACACAGGTGCCATGTTGTGTC
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000509990.5; ENST00000505522.6; ENST00000509644.5; ENST00000394800.6; ENST00000504203.5; ENST00000502929.5; ENST00000512107.5; ENST00000505016.2; ENST00000506147.5; ENST00000514694.5; ENST00000502394.1; ENST00000361059.7
External Link RMBase: m6A_site_687079
mod ID: M6ASITE071177 Click to Show/Hide the Full List
mod site chr5:139284219-139284220:+ [4]
Sequence TTATAAAAGAATTTTTTTGGACATGAATACAAAGATGTCAG
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000514694.5; ENST00000504203.5; ENST00000502394.1; ENST00000502929.5; ENST00000506147.5; ENST00000509644.5; ENST00000505522.6; ENST00000505016.2; ENST00000512107.5; ENST00000394800.6; ENST00000361059.7; ENST00000509990.5
External Link RMBase: m6A_site_687080
mod ID: M6ASITE071178 Click to Show/Hide the Full List
mod site chr5:139284288-139284289:+ [4]
Sequence AACAATATCACCTATAGGAAACTGAACGTAGCCTTTAAACA
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000361059.7; ENST00000504203.5; ENST00000505016.2; ENST00000394800.6; ENST00000505522.6; ENST00000512107.5; ENST00000509990.5; ENST00000502394.1; ENST00000514694.5; ENST00000506147.5; ENST00000509644.5; ENST00000502929.5
External Link RMBase: m6A_site_687081
mod ID: M6ASITE071179 Click to Show/Hide the Full List
mod site chr5:139284639-139284640:+ [5]
Sequence AAAATAATGGATTTGCAGAGACTTGCTATTTAGATTTCAGA
Motif Score 3.319380952
Cell/Tissue List H1299
Seq Type List m6A-seq
Transcript ID List ENST00000514694.5; ENST00000505522.6; ENST00000506147.5; ENST00000361059.7; ENST00000512107.5; ENST00000509990.5; ENST00000509644.5; ENST00000504203.5; ENST00000505016.2; ENST00000502929.5; ENST00000394800.6; ENST00000502394.1
External Link RMBase: m6A_site_687082