Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00532)
Target Name Transcription factor SOX-12 (SOX12)
Synonyms
Protein SOX-22; SOX22
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Gene Name SOX12
Sequence
MVQQRGARAKRDGGPPPPGPGPAEEGAREPGWCKTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAPAKARPRPPGGSGGGSRLKPGPQLPGRGGRRAAGGPLGGGAAAPEDDDEDDDEELLEVRLVETPGRELWRMVPAGRAARGQAERAQGPSGEGAAAAAAASPTPSEDEEPEEEEEEAAAAEEGEEETVASGEESLGFLSRLPPGPAGLDCSALDRDPDLQPPSGTSHFEFPDYCTPEVTEMIAGDWRPSSIADLVFTY
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Function
Transcription factor that binds to DNA at the consensus sequence 5'-ACCAAAG-3' (By similarity). Acts as a transcriptional activator (By similarity). Binds cooperatively with POU3F2/BRN2 or POU3F1/OCT6 to gene promoters, which enhances transcriptional activation (By similarity). Involved in the differentiation of naive CD4-positive T-cells into peripherally induced regulatory T (pT reg) cells under inflammatory conditions (By similarity). Binds to the promoter region of the FOXP3 gene and promotes its transcription, and might thereby contribute to pT reg cell differentiation in the spleen and lymph nodes during inflammation (By similarity). Plays a redundant role with SOX4 and SOX11 in cell survival of developing tissues such as the neural tube, branchial arches and somites, thereby contributing to organogenesis (By similarity). {ECO:0000250|UniProtKB:Q04890}.
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Gene ID 6666
HGNC ID HGNC:11198
Ensembl Gene ID ENSG00000177732
KEGG ID hsa:6666
Chromosomal Location 20p13
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00532)
Transcription factor SOX-12 (SOX12)
N1-methyladenosine (m1A)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M1ASITE000076 Click to Show/Hide the Full List
mod site chr20:326333-326334:+ [1]
Sequence CGGTGGCGGCAGCCGGCTCAAGCCCGGGCCGCAGCTGCCTG
Cell/Tissue List HEK293T
Seq Type List m1A-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m1A_site_612
5-methylcytidine (m5C)
In total 10 m6A sequence/site(s) in this target gene
mod ID: M5CSITE002554 Click to Show/Hide the Full List
mod site chr20:326394-326395:+
Sequence GCGGGAGGGCCTTTGGGGGGCGGGGCGGCGGCGCCCGAGGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m5C_site_28268
mod ID: M5CSITE002555 Click to Show/Hide the Full List
mod site chr20:327105-327106:+
Sequence GCCCCTCCCCACGTCGCCCCCTCCTGCACAGCCACCAGCAG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m5C_site_28269
mod ID: M5CSITE002556 Click to Show/Hide the Full List
mod site chr20:327317-327318:+
Sequence CAACGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m5C_site_28270
mod ID: M5CSITE002557 Click to Show/Hide the Full List
mod site chr20:327318-327319:+
Sequence AACGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m5C_site_28271
mod ID: M5CSITE002558 Click to Show/Hide the Full List
mod site chr20:327319-327320:+
Sequence ACGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m5C_site_28272
mod ID: M5CSITE002559 Click to Show/Hide the Full List
mod site chr20:327320-327321:+
Sequence CGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m5C_site_28273
mod ID: M5CSITE002560 Click to Show/Hide the Full List
mod site chr20:327322-327323:+
Sequence CACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m5C_site_28274
mod ID: M5CSITE002561 Click to Show/Hide the Full List
mod site chr20:327323-327324:+
Sequence ACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGCG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m5C_site_28275
mod ID: M5CSITE002562 Click to Show/Hide the Full List
mod site chr20:327324-327325:+
Sequence CGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGCGC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m5C_site_28276
mod ID: M5CSITE002563 Click to Show/Hide the Full List
mod site chr20:327342-327343:+
Sequence CCCTTCCCTGGGGGGAGGGGCGCACCCCTTTTATCCCCGGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m5C_site_28277
N6-methyladenosine (m6A)
In total 44 m6A sequence/site(s) in this target gene
mod ID: M6ASITE050951 Click to Show/Hide the Full List
mod site chr20:325666-325667:+ [2]
Sequence GATTCCTCGGCCCCCGCAAAACAATGTGTGTTGTGAGCCAG
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; MM6; Jurkat; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; TIME; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519430
mod ID: M6ASITE050952 Click to Show/Hide the Full List
mod site chr20:325733-325734:+ [2]
Sequence GCGCGCCGAGCCCGCCTGAGACCGCGCTGACCTTCTCCCCC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; MM6; Jurkat; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; TIME; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519431
mod ID: M6ASITE050953 Click to Show/Hide the Full List
mod site chr20:325980-325981:+ [2]
Sequence GGCGGGCCGCCGCCCCCGGGACCCGGGCCGGCCGAGGAGGG
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1B; H1A; hESCs; H1299; Jurkat; GSC-11; HEK293A-TOA; MSC; TREX; iSLK; TIME; GSCs; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519432
mod ID: M6ASITE050954 Click to Show/Hide the Full List
mod site chr20:326026-326027:+ [2]
Sequence GCGAGCCCGGCTGGTGCAAGACCCCGAGCGGCCACATCAAG
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; GM12878; MT4; H1299; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519433
mod ID: M6ASITE050955 Click to Show/Hide the Full List
mod site chr20:326102-326103:+ [2]
Sequence CGAACGGCGGAAGATCATGGACCAGTGGCCCGACATGCACA
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519434
mod ID: M6ASITE050956 Click to Show/Hide the Full List
mod site chr20:326171-326172:+ [2]
Sequence CCGCTGGCAGCTGCTGCAGGACTCGGAGAAGATCCCGTTCG
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519435
mod ID: M6ASITE050957 Click to Show/Hide the Full List
mod site chr20:326240-326241:+ [2]
Sequence GCACATGGCGGATTACCCGGACTACAAGTACCGGCCGCGCA
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519436
mod ID: M6ASITE050958 Click to Show/Hide the Full List
mod site chr20:326464-326465:+ [2]
Sequence TGGAAGTGCGCCTGGTCGAGACCCCGGGGCGGGAGCTGTGG
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HepG2; A549; HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519437
mod ID: M6ASITE050959 Click to Show/Hide the Full List
mod site chr20:326517-326518:+ [2]
Sequence GCGGGACGGGCCGCTCGGGGACAAGCGGAGCGCGCCCAAGG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; A549; HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519438
mod ID: M6ASITE050960 Click to Show/Hide the Full List
mod site chr20:326720-326721:+ [2]
Sequence CCCTGGCCCGGCCGGCCTGGACTGCAGCGCCCTGGATCGCG
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519439
mod ID: M6ASITE050962 Click to Show/Hide the Full List
mod site chr20:326747-326748:+ [2]
Sequence CGCCCTGGATCGCGACCCGGACCTGCAGCCTCCCTCGGGCA
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519440
mod ID: M6ASITE050963 Click to Show/Hide the Full List
mod site chr20:326789-326790:+ [2]
Sequence GTCGCACTTCGAGTTCCCGGACTACTGCACCCCCGAGGTTA
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519441
mod ID: M6ASITE050964 Click to Show/Hide the Full List
mod site chr20:326828-326829:+ [2]
Sequence TACCGAGATGATCGCGGGGGACTGGCGCCCGTCTAGCATCG
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519442
mod ID: M6ASITE050965 Click to Show/Hide the Full List
mod site chr20:326852-326853:+ [2]
Sequence GCGCCCGTCTAGCATCGCAGACCTGGTTTTCACCTACTGAG
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519443
mod ID: M6ASITE050966 Click to Show/Hide the Full List
mod site chr20:326904-326905:+ [2]
Sequence CGGGGCGCGCACGCCCCCAAACCAGCTGTTTACATACAGGA
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519444
mod ID: M6ASITE050967 Click to Show/Hide the Full List
mod site chr20:327020-327021:+ [2]
Sequence CCATCCCCCCTCAGATCCAGACATGCCCCTCCCCCGCAGAC
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519445
mod ID: M6ASITE050968 Click to Show/Hide the Full List
mod site chr20:327039-327040:+ [2]
Sequence GACATGCCCCTCCCCCGCAGACACACCCCAAGGCAGCCCAA
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519446
mod ID: M6ASITE050969 Click to Show/Hide the Full List
mod site chr20:327164-327165:+ [2]
Sequence CCTCCCGTCCTCTCCTACAGACCTGCACCCCTCCCCCCTTT
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519447
mod ID: M6ASITE050970 Click to Show/Hide the Full List
mod site chr20:327188-327189:+ [3]
Sequence GCACCCCTCCCCCCTTTTGCACACGCCCCTCCTCGTGGCCG
Motif Score 2.830589286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519448
mod ID: M6ASITE050971 Click to Show/Hide the Full List
mod site chr20:327213-327214:+ [2]
Sequence CCCCTCCTCGTGGCCGGAGGACCCGCCCCCTCCTTTGCTCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; GM12878; MT4; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519449
mod ID: M6ASITE050973 Click to Show/Hide the Full List
mod site chr20:327605-327606:+ [4]
Sequence AGGGTTGGTTTGGGCCTGAAACTCTCCCAAGTGGCATAGCC
Motif Score 2.627720238
Cell/Tissue List CD34; HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519450
mod ID: M6ASITE050974 Click to Show/Hide the Full List
mod site chr20:327776-327777:+ [2]
Sequence ATCCAGCAGTAGAGGAAGGGACCACCCAAGAAAACTAAAAA
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; MM6; Huh7; HEK293A-TOA; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519451
mod ID: M6ASITE050975 Click to Show/Hide the Full List
mod site chr20:327789-327790:+ [2]
Sequence GGAAGGGACCACCCAAGAAAACTAAAAACCAAGGCACCTTA
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; MM6; Huh7; HEK293A-TOA; TREX
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519452
mod ID: M6ASITE050976 Click to Show/Hide the Full List
mod site chr20:327796-327797:+ [2]
Sequence ACCACCCAAGAAAACTAAAAACCAAGGCACCTTACCAGTCT
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; MM6; Huh7; HEK293A-TOA; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519453
mod ID: M6ASITE050977 Click to Show/Hide the Full List
mod site chr20:327825-327826:+ [2]
Sequence CCTTACCAGTCTGTCTGGGGACAGGATCCCTGCTGCACCTT
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; hNPCs; A549; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519454
mod ID: M6ASITE050978 Click to Show/Hide the Full List
mod site chr20:327977-327978:+ [2]
Sequence TGCAGTATACAGCGGGAAAAACTGAGGCACTTTGGTGCTAG
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519455
mod ID: M6ASITE050979 Click to Show/Hide the Full List
mod site chr20:328007-328008:+ [2]
Sequence TTTGGTGCTAGGGGTTTGGGACTGAGGCGTGGAGAGCAGAT
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519456
mod ID: M6ASITE050980 Click to Show/Hide the Full List
mod site chr20:328042-328043:+ [2]
Sequence GCAGATGTGATGGCAGGAAGACTCTCGCTTTTAAACATCTG
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519457
mod ID: M6ASITE050981 Click to Show/Hide the Full List
mod site chr20:328056-328057:+ [2]
Sequence AGGAAGACTCTCGCTTTTAAACATCTGGTTTGGGAGAGACC
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519458
mod ID: M6ASITE050982 Click to Show/Hide the Full List
mod site chr20:328074-328075:+ [2]
Sequence AAACATCTGGTTTGGGAGAGACCATCGACTTGGCCAGTGAG
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519459
mod ID: M6ASITE050984 Click to Show/Hide the Full List
mod site chr20:328081-328082:+ [3]
Sequence TGGTTTGGGAGAGACCATCGACTTGGCCAGTGAGACTGAGA
Motif Score 3.287565476
Cell/Tissue List HEK293T; A549
Seq Type List DART-seq; m6A-CLIP/IP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519460
mod ID: M6ASITE050985 Click to Show/Hide the Full List
mod site chr20:328095-328096:+ [2]
Sequence CCATCGACTTGGCCAGTGAGACTGAGAATGGATTCCGAGTA
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519461
mod ID: M6ASITE050986 Click to Show/Hide the Full List
mod site chr20:328379-328380:+ [2]
Sequence CACACACACAAATCTCAGGAACAAACGGTCCCAGAGTCCTC
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; MM6; Huh7; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519462
mod ID: M6ASITE050987 Click to Show/Hide the Full List
mod site chr20:328403-328404:+ [2]
Sequence ACGGTCCCAGAGTCCTCCGGACCCCTGCCCAGGGTCTCTGC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; MM6; Huh7; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519463
mod ID: M6ASITE050988 Click to Show/Hide the Full List
mod site chr20:328544-328545:+ [2]
Sequence TTTTTTTTTTTTTAAGAAAAACAACAACAACAAAAAAAGAC
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; fibroblasts; A549; MM6; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List rmsk_5045308; ENST00000342665.4
External Link RMBase: m6A_site_519464
mod ID: M6ASITE050989 Click to Show/Hide the Full List
mod site chr20:328547-328548:+ [3]
Sequence TTTTTTTTTTAAGAAAAACAACAACAACAAAAAAAGACAAT
Motif Score 2.173910714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List rmsk_5045308; ENST00000342665.4
External Link RMBase: m6A_site_519465
mod ID: M6ASITE050990 Click to Show/Hide the Full List
mod site chr20:328550-328551:+ [3]
Sequence TTTTTTTAAGAAAAACAACAACAACAAAAAAAGACAATGAA
Motif Score 2.173910714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000342665.4; rmsk_5045308
External Link RMBase: m6A_site_519466
mod ID: M6ASITE050991 Click to Show/Hide the Full List
mod site chr20:328553-328554:+ [5]
Sequence TTTTAAGAAAAACAACAACAACAAAAAAAGACAATGAAAAA
Motif Score 2.173910714
Cell/Tissue List CD8T
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000342665.4; rmsk_5045308
External Link RMBase: m6A_site_519467
mod ID: M6ASITE050992 Click to Show/Hide the Full List
mod site chr20:328563-328564:+ [2]
Sequence AACAACAACAACAAAAAAAGACAATGAAAAAAAAAACGTCA
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HEK293T; HepG2; hESCs; fibroblasts; A549; MM6; Huh7; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List rmsk_5045308; ENST00000342665.4
External Link RMBase: m6A_site_519468
mod ID: M6ASITE050993 Click to Show/Hide the Full List
mod site chr20:328622-328623:+ [2]
Sequence ACTGTCTGTGGTCTTGGAGAACTAGTCTCGTAGCTGAGGGG
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESCs; fibroblasts; H1299; MM6; Huh7; Jurkat; HEK293A-TOA; MSC; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519469
mod ID: M6ASITE050995 Click to Show/Hide the Full List
mod site chr20:328682-328683:+ [2]
Sequence GCACTGGCACCCACAGCAGGACTCCGCCAGTCTGATGCCAG
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESCs; fibroblasts; H1299; MM6; Huh7; Jurkat; HEK293A-TOA; MSC; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519470
mod ID: M6ASITE050996 Click to Show/Hide the Full List
mod site chr20:328704-328705:+ [2]
Sequence TCCGCCAGTCTGATGCCAGGACTGAATAAAGTGTATTTGCC
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESCs; fibroblasts; H1299; MM6; Huh7; HEK293A-TOA; MSC; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519471
mod ID: M6ASITE050997 Click to Show/Hide the Full List
mod site chr20:328767-328768:+ [3]
Sequence CATGTCTGTGCTCTTCCTCAACCCTCCCTAAACAGTTTGCC
Motif Score 2.153267857
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519472
mod ID: M6ASITE050998 Click to Show/Hide the Full List
mod site chr20:328778-328779:+ [2]
Sequence TCTTCCTCAACCCTCCCTAAACAGTTTGCCAGATTCAAGTC
Motif Score 2.20572619
Cell/Tissue List HeLa; A549; hESCs; fibroblasts; H1299; MM6; Huh7; HEK293A-TOA; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000342665.4
External Link RMBase: m6A_site_519473