Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00529)
Target Name Ribose-5-phosphate isomerase (RPIA)
Synonyms
RPI; Phosphoriboisomerase
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Gene Name RPIA
Sequence
MQRPGPFSTLYGRVLAPLPGRAGGAASGGGGNSWDLPGSHVRLPGRAQSGTRGGAGNTSTSCGDSNSICPAPSTMSKAEEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFGGVVELRMAVNKAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSVNMREKPFC
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Family Ribose 5-phosphate isomerase family
Function
Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate and participates in the first step of the non-oxidative branch of the pentose phosphate pathway.
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Gene ID 22934
HGNC ID HGNC:10297
Ensembl Gene ID ENSG00000153574
KEGG ID hsa:22934
Chromosomal Location 2p11.2
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00529)
Ribose-5-phosphate isomerase (RPIA)
Adenosine-to-Inosine editing (A-to-I)
In total 3 m6A sequence/site(s) in this target gene
mod ID: A2ISITE009827 Click to Show/Hide the Full List
mod site chr2:88716215-88716216:+ [1]
Sequence AAGAATGCAGTCTTTTGTCTATTATCTACTTATGACCCGGA
Transcript ID List rmsk_606929; ENST00000283646.5
External Link RMBase: RNA-editing_site_78487
mod ID: A2ISITE009828 Click to Show/Hide the Full List
mod site chr2:88716218-88716219:+ [1]
Sequence AATGCAGTCTTTTGTCTATTATCTACTTATGACCCGGAAGA
Transcript ID List ENST00000283646.5; rmsk_606929
External Link RMBase: RNA-editing_site_78488
mod ID: A2ISITE009829 Click to Show/Hide the Full List
mod site chr2:88716335-88716336:+ [1]
Sequence ATGTCTCCCTAAAACGTGTAAAAGCAAGCTGTACCCCAACC
Transcript ID List rmsk_606929; ENST00000283646.5
External Link RMBase: RNA-editing_site_78489
N6-methyladenosine (m6A)
In total 27 m6A sequence/site(s) in this target gene
mod ID: M6ASITE046131 Click to Show/Hide the Full List
mod site chr2:88691792-88691793:+ [2]
Sequence GGCCTCCGGCGGAGGAGGGAACAGCTGGGACCTCCCGGGTT
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; Jurkat; CD4T; GSC-11; HEK293T; HEK293A-TOA; MSC; iSLK; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483077
mod ID: M6ASITE046132 Click to Show/Hide the Full List
mod site chr2:88691801-88691802:+ [2]
Sequence CGGAGGAGGGAACAGCTGGGACCTCCCGGGTTCCCACGTGC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; Jurkat; CD4T; GSC-11; HEK293T; HEK293A-TOA; MSC; TREX; iSLK; TIME; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483078
mod ID: M6ASITE046133 Click to Show/Hide the Full List
mod site chr2:88691848-88691849:+ [2]
Sequence CGGGGCGTGCACAGTCTGGGACCCGTGGCGGTGCTGGCAAC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; iSLK; MSC; TREX; TIME; endometrial; HEC-1-A; GSCs; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483079
mod ID: M6ASITE046135 Click to Show/Hide the Full List
mod site chr2:88691888-88691889:+ [2]
Sequence CACAAGCACCAGCTGCGGGGACTCCAACAGCATCTGCCCGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; iSLK; MSC; endometrial; HEC-1-A; GSCs; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483080
mod ID: M6ASITE046136 Click to Show/Hide the Full List
mod site chr2:88691972-88691973:+ [2]
Sequence GGGCCGCGCGGCTGTGGAGAACCACGTGAGGGTGAGCACTT
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; CD4T; peripheral-blood; HEK293T; HEC-1-A; NB4; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483081
mod ID: M6ASITE046137 Click to Show/Hide the Full List
mod site chr2:88698516-88698517:+ [3]
Sequence TGGGAATTGGAAGTGGTTCTACAATTGTCCATGCTGTGCAG
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483082
mod ID: M6ASITE046138 Click to Show/Hide the Full List
mod site chr2:88729327-88729328:+ [3]
Sequence ACCCTCAGTGATCTGGATCGACACCCAGAGGTAAGATTGCC
Motif Score 2.865571429
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483083
mod ID: M6ASITE046139 Click to Show/Hide the Full List
mod site chr2:88736566-88736567:+ [3]
Sequence GAATCTCGGGGATCAGTGGCACAAGGGAATCCCCATCGAGG
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483084
mod ID: M6ASITE046140 Click to Show/Hide the Full List
mod site chr2:88736668-88736669:+ [3]
Sequence TGAACTTCGAATGGCTGTCAACAAGGCTGTGAGTGGCCTGG
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483085
mod ID: M6ASITE046141 Click to Show/Hide the Full List
mod site chr2:88738013-88738014:+ [4]
Sequence TAATGGGAATTTTATCTTGGACTGGAAGTTTGACCGGGTAC
Motif Score 4.065041667
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483086
mod ID: M6ASITE046142 Click to Show/Hide the Full List
mod site chr2:88738032-88738033:+ [4]
Sequence GACTGGAAGTTTGACCGGGTACACAAATGGAGTGAAGTGAA
Motif Score 2.856142857
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483087
mod ID: M6ASITE046143 Click to Show/Hide the Full List
mod site chr2:88750007-88750008:+ [3]
Sequence GGACACAGGCCTATTCATCAACATGGCTGAGAGAGTCTACT
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483088
mod ID: M6ASITE046144 Click to Show/Hide the Full List
mod site chr2:88750052-88750053:+ [4]
Sequence GATGCAGGATGGCTCAGTGAACATGAGGGAGAAGCCTTTCT
Motif Score 2.951386905
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483089
mod ID: M6ASITE046146 Click to Show/Hide the Full List
mod site chr2:88750177-88750178:+ [2]
Sequence CTTAATGTATCTCTGCCTGGACAACTTGTGGTGGGGGGTGG
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; MT4
Seq Type List m6A-seq; DART-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483090
mod ID: M6ASITE046147 Click to Show/Hide the Full List
mod site chr2:88750277-88750278:+ [3]
Sequence TTTTAAAAAGAGAAATATAAACATATATTTTTACTATTAAA
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483091
mod ID: M6ASITE046148 Click to Show/Hide the Full List
mod site chr2:88750377-88750378:+ [4]
Sequence AAAAAAAAAAAATGAGGTAAACTGTATTTAAAACCTTTGAC
Motif Score 2.627720238
Cell/Tissue List HEK293T; Huh7
Seq Type List DART-seq; MeRIP-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483092
mod ID: M6ASITE046149 Click to Show/Hide the Full List
mod site chr2:88750389-88750390:+ [5]
Sequence TGAGGTAAACTGTATTTAAAACCTTTGACTTGAGTCTGCTG
Motif Score 2.185083333
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483093
mod ID: M6ASITE046150 Click to Show/Hide the Full List
mod site chr2:88750454-88750455:+ [5]
Sequence GCTGAGAAATAAAAATCAAAACTTCTTTAAGCTGGTAAAGT
Motif Score 2.627720238
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483094
mod ID: M6ASITE046151 Click to Show/Hide the Full List
mod site chr2:88750516-88750517:+ [4]
Sequence CTCCTGATGCCTTACTGGAAACTTTGTTTACTTGTCTGCTA
Motif Score 2.627720238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483095
mod ID: M6ASITE046152 Click to Show/Hide the Full List
mod site chr2:88750525-88750526:+ [4]
Sequence CCTTACTGGAAACTTTGTTTACTTGTCTGCTACCCTCTGAT
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483096
mod ID: M6ASITE046153 Click to Show/Hide the Full List
mod site chr2:88750574-88750575:+ [3]
Sequence AGTTAGTTTTTATTGTGAGCACACATAGTACCTAGTTACAT
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483097
mod ID: M6ASITE046154 Click to Show/Hide the Full List
mod site chr2:88750576-88750577:+ [4]
Sequence TTAGTTTTTATTGTGAGCACACATAGTACCTAGTTACATCT
Motif Score 2.084928571
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483098
mod ID: M6ASITE046155 Click to Show/Hide the Full List
mod site chr2:88750591-88750592:+ [3]
Sequence AGCACACATAGTACCTAGTTACATCTTAAGATCAGGTTTAT
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483099
mod ID: M6ASITE046157 Click to Show/Hide the Full List
mod site chr2:88750646-88750647:+ [4]
Sequence GAGCGGTATGGTATGGAATGACTTGGAATGTAAGCTGTCAG
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483100
mod ID: M6ASITE046158 Click to Show/Hide the Full List
mod site chr2:88750682-88750683:+ [3]
Sequence GTCAGGGAGAAAATGTTGTTACACTTTTGCTAAGATCTGGG
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483101
mod ID: M6ASITE046159 Click to Show/Hide the Full List
mod site chr2:88750787-88750788:+ [4]
Sequence ACTGCTGTGAAATGTGAAGTACTTTGTTTTTTTATTTTTAA
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483102
mod ID: M6ASITE046160 Click to Show/Hide the Full List
mod site chr2:88750915-88750916:+ [4]
Sequence TGTTTGCAGGTTTAAATAAAACAGTGTGGTGCCATTTTGAC
Motif Score 2.20572619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000283646.5
External Link RMBase: m6A_site_483103