Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00486)

Target Name	Cell division control protein 42 homolog (CDC42)
Synonyms	EC 3.6.5.2; G25K GTP-binding protein Click to Show/Hide
Gene Name	CDC42
Sequence	MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL Click to Show/Hide
Family	Small GTPase superfamily, Rho family, CDC42 subfamily
Function	Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase (PubMed:15642749). Regulates cell migration (PubMed:17038317). In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (PubMed:14978216). Required for DOCK10-mediated spine formation in Purkinje cells and hippocampal neurons. In podocytes, facilitates filopodia and podosomes formation upon DOCK11-activation (PubMed:33523862). Upon activation by CaMKII, modulates dendritic spine structural plasticity by relaying CaMKII transient activation to synapse-specific, long-term signaling (By similarity). Also plays a role in phagocytosis through organization of the F-actin cytoskeleton associated with forming phagocytic cups (PubMed:26465210). Click to Show/Hide
Gene ID	998
HGNC ID	HGNC:1736
Ensembl Gene ID	ENSG00000070831
KEGG ID	hsa:998
Chromosomal Location	1p36.12

RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00486)

Cell division control protein 42 homolog (CDC42)

Adenosine-to-Inosine editing (A-to-I)

In total 16 m6A sequence/site(s) in this target gene
mod ID: A2ISITE005222		Click to Show/Hide the Full List
mod site	chr1:22026392-22026393:+		[1]
Sequence	TCAAGCGATTCTCCTGCCTCAGCCACTCGAGTAACTGGGAT
Transcript ID List	ENST00000648697.1; ENST00000634451.2; ENST00000434233.2; ENST00000642072.1; ENST00000404210.5; ENST00000634712.2; ENST00000420503.1; ENST00000635450.2; ENST00000650360.1; ENST00000641009.1; ENST00000452322.2; ENST00000634934.2; ENST00000416769.2; ENST00000635675.2; ENST00000648594.1
External Link	RMBase: RNA-editing_site_2502
mod ID: A2ISITE005232		Click to Show/Hide the Full List
mod site	chr1:22026414-22026415:+		[1]
Sequence	CCACTCGAGTAACTGGGATTACAGTCGCACATCACCACGCC
Transcript ID List	ENST00000642072.1; ENST00000650360.1; ENST00000635450.2; ENST00000648594.1; ENST00000634712.2; ENST00000634934.2; ENST00000420503.1; ENST00000416769.2; ENST00000404210.5; ENST00000635675.2; ENST00000434233.2; ENST00000648697.1; ENST00000634451.2; ENST00000452322.2; ENST00000641009.1
External Link	RMBase: RNA-editing_site_2503
mod ID: A2ISITE005233		Click to Show/Hide the Full List
mod site	chr1:22029726-22029727:+		[2]
Sequence	ATCTCTATGAAAAATACAAAATTTAGCTGGAGGTGGTGGCA
Transcript ID List	ENST00000452322.2; ENST00000420503.1; ENST00000642072.1; ENST00000648594.1; ENST00000635675.2; ENST00000634451.2; ENST00000650360.1; ENST00000404210.5; ENST00000634712.2; rmsk_47071; ENST00000641009.1; ENST00000635450.2; ENST00000434233.2; ENST00000648697.1; ENST00000634934.2; ENST00000416769.2
External Link	RMBase: RNA-editing_site_2504
mod ID: A2ISITE005234		Click to Show/Hide the Full List
mod site	chr1:22029827-22029828:+		[3]
Sequence	GCAGAGGTTGCGGTGAGCCGAGATCATGCCATTGCACTCCA
Transcript ID List	ENST00000648594.1; ENST00000434233.2; ENST00000648697.1; ENST00000650360.1; ENST00000634934.2; ENST00000452322.2; ENST00000641009.1; ENST00000634712.2; ENST00000635675.2; ENST00000420503.1; rmsk_47071; ENST00000642072.1; ENST00000416769.2; ENST00000634451.2; ENST00000635450.2; ENST00000404210.5
External Link	RMBase: RNA-editing_site_2505
mod ID: A2ISITE005235		Click to Show/Hide the Full List
mod site	chr1:22059060-22059061:+		[1]
Sequence	TTCTTGAACTCCTGGCCTCAAGTGACCTCCCACCTTGGCCT
Transcript ID List	ENST00000400259.5; ENST00000498236.1; ENST00000648594.1; ENST00000344548.7; ENST00000652582.1; ENST00000315554.12; ENST00000411827.1; ENST00000651171.1
External Link	RMBase: RNA-editing_site_2506
mod ID: A2ISITE005236		Click to Show/Hide the Full List
mod site	chr1:22059264-22059265:+		[2]
Sequence	CCTCCCTAGTAGCTGGGATTACAGGCATGTGCCACCACAGC
Transcript ID List	ENST00000652582.1; ENST00000400259.5; ENST00000498236.1; ENST00000315554.12; ENST00000431803.2; ENST00000411827.1; ENST00000648594.1; ENST00000344548.7; ENST00000651171.1
External Link	RMBase: RNA-editing_site_2507
mod ID: A2ISITE005237		Click to Show/Hide the Full List
mod site	chr1:22062041-22062042:+		[2]
Sequence	TCTGCCTCCTGGGTTCAAGCAATTCTGCCTCAGCCTCCCGA
Transcript ID List	ENST00000431803.2; ENST00000400259.5; ENST00000344548.7; ENST00000651171.1; ENST00000411827.1; ENST00000652582.1; ENST00000648594.1; ENST00000498236.1; ENST00000315554.12
External Link	RMBase: RNA-editing_site_2508
mod ID: A2ISITE005238		Click to Show/Hide the Full List
mod site	chr1:22062609-22062610:+		[2]
Sequence	GAGTTTTTTTCTGATTGGGTATGGTGGCTCATGCCTGTAAT
Transcript ID List	ENST00000431803.2; ENST00000648594.1; ENST00000315554.12; ENST00000498236.1; ENST00000344548.7; ENST00000652582.1; ENST00000651171.1; ENST00000411827.1; rmsk_47159; ENST00000400259.5
External Link	RMBase: RNA-editing_site_2509
mod ID: A2ISITE005239		Click to Show/Hide the Full List
mod site	chr1:22066318-22066319:+		[1]
Sequence	TGGGAGGCAGACGTTGCAGTAAGCTGAAATTGCGCCACTGT
Transcript ID List	ENST00000648594.1; rmsk_47168; ENST00000315554.12; ENST00000400259.5; ENST00000498236.1; ENST00000651171.1; ENST00000652582.1; ENST00000411827.1; ENST00000344548.7
External Link	RMBase: RNA-editing_site_2510
mod ID: A2ISITE005240		Click to Show/Hide the Full List
mod site	chr1:22066319-22066320:+		[1]
Sequence	GGGAGGCAGACGTTGCAGTAAGCTGAAATTGCGCCACTGTG
Transcript ID List	ENST00000651171.1; ENST00000400259.5; ENST00000315554.12; ENST00000498236.1; ENST00000648594.1; ENST00000652582.1; ENST00000344548.7; rmsk_47168; ENST00000411827.1
External Link	RMBase: RNA-editing_site_2511
mod ID: A2ISITE005241		Click to Show/Hide the Full List
mod site	chr1:22067763-22067764:+		[2]
Sequence	GGACTCTGCCCTCTGGACCTAATCACCTCCCAGCAGTCTCA
Transcript ID List	ENST00000344548.7; ENST00000652582.1; ENST00000411827.1; ENST00000400259.5; ENST00000315554.12; ENST00000651171.1; ENST00000648594.1; ENST00000498236.1
External Link	RMBase: RNA-editing_site_2512
mod ID: A2ISITE005242		Click to Show/Hide the Full List
mod site	chr1:22071250-22071251:+		[2]
Sequence	CGTCGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTC
Transcript ID List	ENST00000315554.12; ENST00000400259.5; ENST00000498236.1; ENST00000648594.1; ENST00000651171.1; ENST00000344548.7; ENST00000411827.1; ENST00000652582.1
External Link	RMBase: RNA-editing_site_2513
mod ID: A2ISITE005243		Click to Show/Hide the Full List
mod site	chr1:22074654-22074655:+		[1]
Sequence	GTCTTGAACTCCTCAGCTCTAGTGATCTTCCCACTTTGGCC
Transcript ID List	ENST00000648594.1; ENST00000400259.5; ENST00000344548.7; ENST00000652582.1; ENST00000411827.1; ENST00000498236.1; ENST00000315554.12; ENST00000651171.1
External Link	RMBase: RNA-editing_site_2514
mod ID: A2ISITE005244		Click to Show/Hide the Full List
mod site	chr1:22076301-22076302:+		[1]
Sequence	AAACCCTGTCTCTATTAAATACAAACATTATCCAGGCGTGG
Transcript ID List	ENST00000651171.1; ENST00000652582.1; ENST00000315554.12; ENST00000411827.1; ENST00000344548.7; ENST00000498236.1; ENST00000648594.1; rmsk_47196; ENST00000400259.5
External Link	RMBase: RNA-editing_site_2515
mod ID: A2ISITE005250		Click to Show/Hide the Full List
mod site	chr1:22076337-22076338:+		[3]
Sequence	CGTGGTGGCATGCACCTGTAATCCCAGTTGCTCTGGAGGCT
Transcript ID List	ENST00000411827.1; ENST00000315554.12; rmsk_47196; ENST00000651171.1; ENST00000400259.5; ENST00000652582.1; ENST00000648594.1; ENST00000344548.7; ENST00000498236.1
External Link	RMBase: RNA-editing_site_2516
mod ID: A2ISITE005255		Click to Show/Hide the Full List
mod site	chr1:22076368-22076369:+		[2]
Sequence	TCTGGAGGCTGAGGCAGGATAATCGCTTGAACCCGGGAGGC
Transcript ID List	ENST00000344548.7; ENST00000651171.1; ENST00000648594.1; rmsk_47196; ENST00000498236.1; ENST00000652582.1; ENST00000411827.1; ENST00000315554.12; ENST00000400259.5
External Link	RMBase: RNA-editing_site_2517

5-methylcytidine (m5C)

In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE000490		Click to Show/Hide the Full List
mod site	chr1:22086816-22086817:+		[4]
Sequence	AGAGACTGCTGAAAAGCTGGCCCGTGACCTGAAGGCTGTCA
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000648594.1; ENST00000498236.1; ENST00000400259.5; ENST00000344548.7; ENST00000315554.12
External Link	RMBase: m5C_site_1455

N6-methyladenosine (m6A)

In total 65 m6A sequence/site(s) in this target gene
mod ID: M6ASITE003774		Click to Show/Hide the Full List
mod site	chr1:22025772-22025773:+		[5]
Sequence	GGAAATGACTGAAATGTGGGACCTGCGGGCTCCTCGGGCTG
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; HEK293T; H1A; H1B; MM6; HEK293A-TOA; MSC; TREX; iSLK; endometrial; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000648594.1; ENST00000634451.2; ENST00000452322.2; ENST00000635450.2; ENST00000416769.2; ENST00000404210.5; ENST00000650360.1; ENST00000434233.2; ENST00000641009.1; ENST00000635675.2; ENST00000634712.2; ENST00000634934.2; ENST00000642072.1; ENST00000420503.1; ENST00000648697.1
External Link	RMBase: m6A_site_13121
mod ID: M6ASITE003775		Click to Show/Hide the Full List
mod site	chr1:22025799-22025800:+		[5]
Sequence	GGCTCCTCGGGCTGACTTGGACCTCACTGCAGCTCTGGAGG
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; HEK293T; H1A; H1B; MM6; peripheral-blood; GSC-11; HEK293A-TOA; MSC; TREX; iSLK; endometrial; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000634712.2; ENST00000416769.2; ENST00000634934.2; ENST00000650360.1; ENST00000641009.1; ENST00000434233.2; ENST00000420503.1; ENST00000648697.1; ENST00000404210.5; ENST00000635450.2; ENST00000635675.2; ENST00000634451.2; ENST00000642072.1; ENST00000452322.2; ENST00000648594.1
External Link	RMBase: m6A_site_13122
mod ID: M6ASITE003776		Click to Show/Hide the Full List
mod site	chr1:22025823-22025824:+		[5]
Sequence	CACTGCAGCTCTGGAGGTGGACCTCGTCCTGGGACCCTAGA
Motif Score	3.622404762
Cell/Tissue List	HeLa; HEK293T; H1A; H1B; MM6; peripheral-blood; HEK293A-TOA; MSC; TREX; iSLK; endometrial; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000648697.1; ENST00000416769.2; ENST00000434233.2; ENST00000452322.2; ENST00000404210.5; ENST00000634451.2; ENST00000634712.2; ENST00000641009.1; ENST00000635675.2; ENST00000642072.1; ENST00000635450.2; ENST00000650360.1; ENST00000634934.2; ENST00000648594.1; ENST00000420503.1
External Link	RMBase: m6A_site_13123
mod ID: M6ASITE003777		Click to Show/Hide the Full List
mod site	chr1:22025836-22025837:+		[5]
Sequence	GAGGTGGACCTCGTCCTGGGACCCTAGAAGCCCATTTCCGC
Motif Score	3.622404762
Cell/Tissue List	HeLa; HEK293T; H1A; H1B; MM6; peripheral-blood; HEK293A-TOA; MSC; TREX; iSLK; TIME; endometrial; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000642072.1; ENST00000416769.2; ENST00000641009.1; ENST00000635675.2; ENST00000648594.1; ENST00000452322.2; ENST00000650360.1; ENST00000404210.5; ENST00000634451.2; ENST00000634712.2; ENST00000635450.2; ENST00000420503.1; ENST00000434233.2; ENST00000634934.2; ENST00000648697.1
External Link	RMBase: m6A_site_13124
mod ID: M6ASITE003778		Click to Show/Hide the Full List
mod site	chr1:22028029-22028030:+		[6]
Sequence	GGAAGAGAGTATTAAAGAAAACAATGGGCCGGGCACGGTGG
Motif Score	2.20572619
Cell/Tissue List	Huh7
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000404210.5; ENST00000648697.1; ENST00000642072.1; ENST00000634451.2; ENST00000420503.1; ENST00000635450.2; ENST00000434233.2; ENST00000648594.1; ENST00000634712.2; ENST00000416769.2; ENST00000641009.1; ENST00000650360.1; ENST00000452322.2; ENST00000635675.2; ENST00000634934.2
External Link	RMBase: m6A_site_13125
mod ID: M6ASITE003779		Click to Show/Hide the Full List
mod site	chr1:22030317-22030318:+		[7]
Sequence	CTTAGAGTTCCAGAATTGAGACTGAAGTGTACCCAGAGACA
Motif Score	3.319380952
Cell/Tissue List	HEK293T; A549; GM12878; MM6; Huh7; HEK293A-TOA; TREX
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000634934.2; ENST00000641009.1; ENST00000404210.5; ENST00000635450.2; ENST00000434233.2; ENST00000452322.2; ENST00000634451.2; ENST00000648697.1; ENST00000635675.2; ENST00000634712.2; ENST00000650360.1; ENST00000416769.2; ENST00000420503.1; ENST00000648594.1; ENST00000642072.1
External Link	RMBase: m6A_site_13130
mod ID: M6ASITE003780		Click to Show/Hide the Full List
mod site	chr1:22030335-22030336:+		[5]
Sequence	AGACTGAAGTGTACCCAGAGACACAAAGAAATACAGAAGTC
Motif Score	2.897386905
Cell/Tissue List	HeLa; HEK293T; A549; hESC-HEK293T; HepG2; GM12878; MM6; Huh7; HEK293A-TOA; iSLK; TREX
Seq Type List	m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List	ENST00000634712.2; ENST00000634934.2; ENST00000452322.2; ENST00000635675.2; ENST00000634451.2; ENST00000434233.2; ENST00000416769.2; ENST00000650360.1; ENST00000648697.1; ENST00000642072.1; ENST00000641009.1; ENST00000648594.1; ENST00000404210.5; ENST00000635450.2; ENST00000420503.1
External Link	RMBase: m6A_site_13131
mod ID: M6ASITE003781		Click to Show/Hide the Full List
mod site	chr1:22030474-22030475:+		[5]
Sequence	CTTCTGGGCTCCCACCAGAGACCCTCAGTGAAGACTCTGTT
Motif Score	2.876744048
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000404210.5; ENST00000648594.1; ENST00000641009.1; ENST00000635450.2; ENST00000650360.1; ENST00000634712.2; ENST00000416769.2; ENST00000420503.1; ENST00000634934.2; ENST00000452322.2; ENST00000434233.2; ENST00000648697.1; ENST00000635675.2; ENST00000634451.2
External Link	RMBase: m6A_site_13135
mod ID: M6ASITE003782		Click to Show/Hide the Full List
mod site	chr1:22030487-22030488:+		[5]
Sequence	ACCAGAGACCCTCAGTGAAGACTCTGTTGAAGACTTTAAGA
Motif Score	3.319380952
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List	m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List	ENST00000650360.1; ENST00000434233.2; ENST00000641009.1; ENST00000635450.2; ENST00000648697.1; ENST00000634712.2; ENST00000416769.2; ENST00000420503.1; ENST00000648594.1; ENST00000635675.2; ENST00000634451.2; ENST00000452322.2; ENST00000404210.5; ENST00000634934.2
External Link	RMBase: m6A_site_13136
mod ID: M6ASITE003783		Click to Show/Hide the Full List
mod site	chr1:22030499-22030500:+		[5]
Sequence	CAGTGAAGACTCTGTTGAAGACTTTAAGACCATGCTAGAAA
Motif Score	3.319380952
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A
Seq Type List	m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List	ENST00000434233.2; ENST00000648697.1; ENST00000641009.1; ENST00000635450.2; ENST00000634934.2; ENST00000420503.1; ENST00000648594.1; ENST00000635675.2; ENST00000416769.2; ENST00000634712.2; ENST00000650360.1; ENST00000634451.2; ENST00000452322.2; ENST00000404210.5
External Link	RMBase: m6A_site_13137
mod ID: M6ASITE003784		Click to Show/Hide the Full List
mod site	chr1:22030507-22030508:+		[5]
Sequence	ACTCTGTTGAAGACTTTAAGACCATGCTAGAAAGCCTCCCG
Motif Score	2.876744048
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000635675.2; ENST00000420503.1; ENST00000434233.2; ENST00000452322.2; ENST00000634451.2; ENST00000634934.2; ENST00000634712.2; ENST00000648594.1; ENST00000416769.2; ENST00000404210.5; ENST00000648697.1; ENST00000650360.1; ENST00000635450.2; ENST00000641009.1
External Link	RMBase: m6A_site_13138
mod ID: M6ASITE003785		Click to Show/Hide the Full List
mod site	chr1:22030596-22030597:+		[5]
Sequence	TGTCCTCAGGCATCTCTAGGACCTTGCTGGACGGTGGTGGC
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List	ENST00000634934.2; ENST00000642137.1; ENST00000635675.2; ENST00000420503.1; ENST00000434233.2; ENST00000635450.2; ENST00000650360.1; ENST00000404210.5; ENST00000634712.2; ENST00000416769.2; ENST00000634451.2; ENST00000641009.1; ENST00000648697.1; ENST00000452322.2; ENST00000648594.1
External Link	RMBase: m6A_site_13142
mod ID: M6ASITE003786		Click to Show/Hide the Full List
mod site	chr1:22030606-22030607:+		[8]
Sequence	CATCTCTAGGACCTTGCTGGACGGTGGTGGCTGAGACCTGA
Motif Score	3.616982143
Cell/Tissue List	CD8T; A549
Seq Type List	m6A-CLIP/IP
Transcript ID List	ENST00000452322.2; ENST00000634451.2; ENST00000650360.1; ENST00000420503.1; ENST00000434233.2; ENST00000642137.1; ENST00000648594.1; ENST00000634934.2; ENST00000416769.2; ENST00000641009.1; ENST00000648697.1; ENST00000634712.2; ENST00000404210.5; ENST00000635675.2; ENST00000635450.2
External Link	RMBase: m6A_site_13143
mod ID: M6ASITE003787		Click to Show/Hide the Full List
mod site	chr1:22030621-22030622:+		[5]
Sequence	GCTGGACGGTGGTGGCTGAGACCTGATATCCACACAAAGGA
Motif Score	2.876744048
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List	ENST00000634934.2; ENST00000404210.5; ENST00000416769.2; ENST00000420503.1; ENST00000635675.2; ENST00000642137.1; ENST00000648594.1; ENST00000434233.2; ENST00000634712.2
External Link	RMBase: m6A_site_13144
mod ID: M6ASITE003788		Click to Show/Hide the Full List
mod site	chr1:22030646-22030647:+		[5]
Sequence	ATATCCACACAAAGGAGCAGACTGTGGAAATGCTGGTGCAG
Motif Score	3.319380952
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000634712.2; ENST00000642137.1; ENST00000404210.5; ENST00000434233.2; ENST00000635675.2; ENST00000420503.1; ENST00000648594.1; ENST00000634934.2; ENST00000416769.2
External Link	RMBase: m6A_site_13145
mod ID: M6ASITE003789		Click to Show/Hide the Full List
mod site	chr1:22030820-22030821:+		[8]
Sequence	TCTCTTGGATGCAAGATCCAACTGCACCCATGGGAAATCTG
Motif Score	2.595904762
Cell/Tissue List	A549
Seq Type List	m6A-CLIP/IP
Transcript ID List	ENST00000648798.1; ENST00000634712.2; ENST00000634934.2; ENST00000434233.2; ENST00000404210.5; ENST00000635675.2; ENST00000416769.2; ENST00000648594.1
External Link	RMBase: m6A_site_13148
mod ID: M6ASITE003790		Click to Show/Hide the Full List
mod site	chr1:22030842-22030843:+		[5]
Sequence	TGCACCCATGGGAAATCTGAACTTCCACTTTCTTTGAGCTT
Motif Score	3.373380952
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; fibroblasts; GM12878; CD8T; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List	ENST00000648798.1; ENST00000635675.2; ENST00000416769.2; ENST00000648594.1; ENST00000634934.2; ENST00000404210.5; ENST00000634712.2; ENST00000434233.2
External Link	RMBase: m6A_site_13149
mod ID: M6ASITE003791		Click to Show/Hide the Full List
mod site	chr1:22030848-22030849:+		[9]
Sequence	CATGGGAAATCTGAACTTCCACTTTCTTTGAGCTTGTCTTT
Motif Score	2.475107143
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000648594.1; ENST00000635675.2; ENST00000416769.2; ENST00000648798.1; ENST00000404210.5; ENST00000434233.2; ENST00000634934.2; ENST00000634712.2
External Link	RMBase: m6A_site_13150
mod ID: M6ASITE003792		Click to Show/Hide the Full List
mod site	chr1:22030892-22030893:+		[5]
Sequence	TGTAATAAGAATCCATCAAAACCCATGTCTGGATCTCTCTT
Motif Score	2.185083333
Cell/Tissue List	HeLa; HEK293T; A549; GM12878; Huh7; HEK293A-TOA; MSC; iSLK; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000648798.1; ENST00000634934.2; ENST00000416769.2; ENST00000635675.2; ENST00000434233.2; ENST00000648594.1; ENST00000404210.5; ENST00000634712.2
External Link	RMBase: m6A_site_13152
mod ID: M6ASITE003793		Click to Show/Hide the Full List
mod site	chr1:22030967-22030968:+		[10]
Sequence	TTCTCTGTCCTCTTGTTAGGACAATCAGCCTGCTGCTTTGG
Motif Score	3.643047619
Cell/Tissue List	HEK293T; A549; Huh7; MSC
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000404210.5; ENST00000648594.1; ENST00000648798.1; ENST00000635675.2; ENST00000634934.2; ENST00000634712.2; ENST00000434233.2; ENST00000416769.2
External Link	RMBase: m6A_site_13156
mod ID: M6ASITE003794		Click to Show/Hide the Full List
mod site	chr1:22031112-22031113:+		[8]
Sequence	CAAAGAGGTAATCAACTTTAACTTTCAGAATTCATGAATCT
Motif Score	2.590089286
Cell/Tissue List	A549
Seq Type List	m6A-CLIP/IP
Transcript ID List	ENST00000634712.2; ENST00000648594.1; ENST00000635675.2; ENST00000416769.2; ENST00000404210.5; ENST00000648798.1; ENST00000634934.2
External Link	RMBase: m6A_site_13157
mod ID: M6ASITE003795		Click to Show/Hide the Full List
mod site	chr1:22052701-22052702:+		[5]
Sequence	CCTGTCCGGCAGCCGAGGAGACCCCGCGCAGTGCTGCCAAC
Motif Score	2.876744048
Cell/Tissue List	HeLa; HEK293T; HepG2; fibroblasts; A549; HEK293A-TOA; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000400259.5; ENST00000344548.7; ENST00000315554.12; ENST00000648594.1
External Link	RMBase: m6A_site_13161
mod ID: M6ASITE003796		Click to Show/Hide the Full List
mod site	chr1:22052828-22052829:+		[5]
Sequence	TCCTCTCCCAGTCCTCGGGGACACCCCGTCTGCGGGATCGT
Motif Score	3.643047619
Cell/Tissue List	HeLa; HEK293A-TOA; MSC; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000651171.1; ENST00000648594.1; ENST00000344548.7; ENST00000400259.5; ENST00000315554.12; ENST00000652582.1; ENST00000498236.1
External Link	RMBase: m6A_site_13163
mod ID: M6ASITE003797		Click to Show/Hide the Full List
mod site	chr1:22074212-22074213:+		[11]
Sequence	CAGGCTCCTGAGTAGCTGGGACTACAGGTGCGTGCCACCAT
Motif Score	4.065041667
Cell/Tissue List	fibroblasts; iSLK
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000411827.1; ENST00000652582.1; ENST00000344548.7; ENST00000315554.12; ENST00000648594.1; ENST00000400259.5; ENST00000651171.1; ENST00000498236.1
External Link	RMBase: m6A_site_13164
mod ID: M6ASITE003798		Click to Show/Hide the Full List
mod site	chr1:22078461-22078462:+		[12]
Sequence	TTGAAATATTTAAAGTGGATACAAAACTATTTCAGCAATGC
Motif Score	2.110482143
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000315554.12; ENST00000411827.1; ENST00000651171.1; ENST00000498236.1; ENST00000400259.5; ENST00000344548.7; ENST00000652582.1; ENST00000648594.1
External Link	RMBase: m6A_site_13165
mod ID: M6ASITE003799		Click to Show/Hide the Full List
mod site	chr1:22078466-22078467:+		[11]
Sequence	ATATTTAAAGTGGATACAAAACTATTTCAGCAATGCAGACA
Motif Score	2.627720238
Cell/Tissue List	fibroblasts; iSLK
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000498236.1; ENST00000651171.1; ENST00000648594.1; ENST00000344548.7; ENST00000411827.1; ENST00000400259.5; ENST00000315554.12; ENST00000652582.1
External Link	RMBase: m6A_site_13166
mod ID: M6ASITE003800		Click to Show/Hide the Full List
mod site	chr1:22078484-22078485:+		[12]
Sequence	AAACTATTTCAGCAATGCAGACAATTAAGTGTGTTGTTGTG
Motif Score	2.897386905
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000344548.7; ENST00000315554.12; ENST00000498236.1; ENST00000652582.1; ENST00000648594.1; ENST00000400259.5; ENST00000651171.1; ENST00000411827.1
External Link	RMBase: m6A_site_13167
mod ID: M6ASITE003810		Click to Show/Hide the Full List
mod site	chr1:22078526-22078527:+		[12]
Sequence	GCGATGGTGCTGTTGGTAAAACATGTCTCCTGATATCCTAC
Motif Score	2.20572619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000498236.1; ENST00000344548.7; ENST00000400259.5; ENST00000315554.12; ENST00000411827.1; ENST00000652582.1; ENST00000651171.1; ENST00000648594.1
External Link	RMBase: m6A_site_13168
mod ID: M6ASITE003821		Click to Show/Hide the Full List
mod site	chr1:22081762-22081763:+		[5]
Sequence	ACAGTTATGATTGGTGGAGAACCATATACTCTTGGACTTTT
Motif Score	2.930744048
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000651171.1; ENST00000652582.1; ENST00000400259.5; ENST00000315554.12; ENST00000648594.1; ENST00000411827.1; ENST00000498236.1; ENST00000344548.7
External Link	RMBase: m6A_site_13169
mod ID: M6ASITE003832		Click to Show/Hide the Full List
mod site	chr1:22081777-22081778:+		[5]
Sequence	GGAGAACCATATACTCTTGGACTTTTTGATACTGCAGGTGA
Motif Score	4.065041667
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000498236.1; ENST00000315554.12; ENST00000648594.1; ENST00000652582.1; ENST00000411827.1; ENST00000344548.7; ENST00000651171.1; ENST00000400259.5
External Link	RMBase: m6A_site_13170
mod ID: M6ASITE003843		Click to Show/Hide the Full List
mod site	chr1:22086453-22086454:+		[13]
Sequence	TCTAGGGCAAGAGGATTATGACAGATTACGACCGCTGAGTT
Motif Score	2.859755952
Cell/Tissue List	kidney; liver
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000315554.12; ENST00000651171.1; ENST00000344548.7; ENST00000498236.1; ENST00000400259.5; ENST00000648594.1; ENST00000411827.1; ENST00000652582.1
External Link	RMBase: m6A_site_13171
mod ID: M6ASITE003854		Click to Show/Hide the Full List
mod site	chr1:22086482-22086483:+		[5]
Sequence	GACCGCTGAGTTATCCACAAACAGATGTATTTCTAGTCTGT
Motif Score	2.20572619
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000344548.7; ENST00000315554.12; ENST00000400259.5; ENST00000652582.1; ENST00000411827.1; ENST00000648594.1; ENST00000498236.1; ENST00000651171.1
External Link	RMBase: m6A_site_13172
mod ID: M6ASITE003865		Click to Show/Hide the Full List
mod site	chr1:22086701-22086702:+		[5]
Sequence	TAACTCACCACTGTCCAAAGACTCCTTTCTTGCTTGTTGGG
Motif Score	3.319380952
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000315554.12; ENST00000344548.7; ENST00000652582.1; ENST00000400259.5; ENST00000651171.1; ENST00000648594.1; ENST00000498236.1; ENST00000411827.1
External Link	RMBase: m6A_site_13173
mod ID: M6ASITE003876		Click to Show/Hide the Full List
mod site	chr1:22086722-22086723:+		[5]
Sequence	CTCCTTTCTTGCTTGTTGGGACTCAAATTGATCTCAGAGAT
Motif Score	4.065041667
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000400259.5; ENST00000315554.12; ENST00000498236.1; ENST00000344548.7; ENST00000648594.1; ENST00000411827.1; ENST00000651171.1
External Link	RMBase: m6A_site_13174
mod ID: M6ASITE003887		Click to Show/Hide the Full List
mod site	chr1:22086774-22086775:+		[9]
Sequence	TATTGAGAAACTTGCCAAGAACAAACAGAAGCCTATCACTC
Motif Score	2.951386905
Cell/Tissue List	HEK293T; hESC-HEK293T
Seq Type List	DART-seq; MAZTER-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000315554.12; ENST00000411827.1; ENST00000648594.1; ENST00000498236.1
External Link	RMBase: m6A_site_13175
mod ID: M6ASITE003895		Click to Show/Hide the Full List
mod site	chr1:22086860-22086861:+		[12]
Sequence	ATGTGGAGTGTTCTGCACTTACACAGGTAAGAATGGCATGA
Motif Score	2.07285119
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000315554.12; ENST00000498236.1; ENST00000400259.5; ENST00000344548.7; ENST00000648594.1
External Link	RMBase: m6A_site_13176
mod ID: M6ASITE003906		Click to Show/Hide the Full List
mod site	chr1:22091483-22091484:+		[5]
Sequence	GCTGCCCTGGAGCCTCCAGAACCGAAGAAGAGCCGCAGGTG
Motif Score	2.930744048
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000648594.1; ENST00000400259.5; ENST00000344548.7
External Link	RMBase: m6A_site_13177
mod ID: M6ASITE003917		Click to Show/Hide the Full List
mod site	chr1:22091517-22091518:+		[5]
Sequence	GCAGGTGTGTGCTGCTATGAACATCTCTCCAGAGCCCTTTC
Motif Score	2.951386905
Cell/Tissue List	HeLa; HEK293T; hESC-HEK293T
Seq Type List	m6A-seq; DART-seq; MAZTER-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: m6A_site_13178
mod ID: M6ASITE003928		Click to Show/Hide the Full List
mod site	chr1:22091541-22091542:+		[13]
Sequence	CTCTCCAGAGCCCTTTCTGCACAGCTGGTGTCGGCATCATA
Motif Score	2.830589286
Cell/Tissue List	brain; liver
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: m6A_site_13179
mod ID: M6ASITE003939		Click to Show/Hide the Full List
mod site	chr1:22091584-22091585:+		[5]
Sequence	AAAAGCAATGTTTAAATCAAACTAAAGATTAAAAATTAAAA
Motif Score	2.627720238
Cell/Tissue List	HeLa; HEK293T
Seq Type List	m6A-seq; DART-seq
Transcript ID List	ENST00000400259.5; ENST00000344548.7; ENST00000648594.1
External Link	RMBase: m6A_site_13180
mod ID: M6ASITE003950		Click to Show/Hide the Full List
mod site	chr1:22091623-22091624:+		[9]
Sequence	AATTCGTTTTTGCAATAATGACAAATGCCCTGCACCTACCC
Motif Score	2.859755952
Cell/Tissue List	HEK293T; hESC-HEK293T
Seq Type List	DART-seq; MAZTER-seq
Transcript ID List	ENST00000400259.5; ENST00000344548.7; ENST00000648594.1
External Link	RMBase: m6A_site_13181
mod ID: M6ASITE003951		Click to Show/Hide the Full List
mod site	chr1:22091661-22091662:+		[5]
Sequence	CCCACATGCACTCGTGTGAGACAAGGCCCATAGGTATGGCC
Motif Score	2.897386905
Cell/Tissue List	HeLa; HEK293T; hESC-HEK293T
Seq Type List	m6A-seq; DART-seq; MAZTER-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: m6A_site_13182
mod ID: M6ASITE003952		Click to Show/Hide the Full List
mod site	chr1:22091702-22091703:+		[9]
Sequence	CCCCCCTTCCCCCTCCCAGTACTAGTTAATTTTGAGTAATT
Motif Score	3.278136905
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000400259.5; ENST00000648594.1; ENST00000344548.7
External Link	RMBase: m6A_site_13183
mod ID: M6ASITE003953		Click to Show/Hide the Full List
mod site	chr1:22091746-22091747:+		[9]
Sequence	TTGTCAGAAAAGTGATTAGTACTATTTTTTTTTGTTGTTTC
Motif Score	3.278136905
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000400259.5; ENST00000648594.1; ENST00000344548.7
External Link	RMBase: m6A_site_13184
mod ID: M6ASITE003954		Click to Show/Hide the Full List
mod site	chr1:22091844-22091845:+		[9]
Sequence	GCAAGGCATGCTTGTGGATGACTCTGTAACAGACTAATTGG
Motif Score	3.28175
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000400259.5; ENST00000344548.7; ENST00000648594.1
External Link	RMBase: m6A_site_13185
mod ID: M6ASITE003955		Click to Show/Hide the Full List
mod site	chr1:22091911-22091912:+		[12]
Sequence	ACTCTGGAGAGTAATCTGGGACATCTTAGTGTTTTGTTTTG
Motif Score	3.643047619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000400259.5; ENST00000344548.7; ENST00000648594.1
External Link	RMBase: m6A_site_13186
mod ID: M6ASITE003956		Click to Show/Hide the Full List
mod site	chr1:22092050-22092051:+		[12]
Sequence	GAGGAGGACGGATTGATTCCACATTCCACTTCCTAGATCTA
Motif Score	2.053113095
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: m6A_site_13187
mod ID: M6ASITE003957		Click to Show/Hide the Full List
mod site	chr1:22092080-22092081:+		[9]
Sequence	TCCTAGATCTAGTTTAGAAAACATGTTCCCCATCTGGTGCT
Motif Score	2.20572619
Cell/Tissue List	HEK293T; hESC-HEK293T
Seq Type List	DART-seq; MAZTER-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: m6A_site_13188
mod ID: M6ASITE003958		Click to Show/Hide the Full List
mod site	chr1:22092136-22092137:+		[12]
Sequence	AGTAAATGCCTCATTTAATAACATACTCCTTTTTGAAAGTT
Motif Score	2.168095238
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000400259.5; ENST00000648594.1; ENST00000344548.7
External Link	RMBase: m6A_site_13189
mod ID: M6ASITE003959		Click to Show/Hide the Full List
mod site	chr1:22092199-22092200:+		[5]
Sequence	TAGATCCAGTATTTGATGAAACTCATGAAAGTGGGTGGAGC
Motif Score	2.627720238
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000400259.5; ENST00000648594.1; ENST00000344548.7
External Link	RMBase: m6A_site_13190
mod ID: M6ASITE003960		Click to Show/Hide the Full List
mod site	chr1:22092246-22092247:+		[9]
Sequence	TGCCCCTCCTCTTTTCTAGGACGCACTATATGTGACTGTGA
Motif Score	3.616982143
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000400259.5; ENST00000648594.1; ENST00000344548.7
External Link	RMBase: m6A_site_13191
mod ID: M6ASITE003961		Click to Show/Hide the Full List
mod site	chr1:22092260-22092261:+		[9]
Sequence	TCTAGGACGCACTATATGTGACTGTGACTTTCAAGGACATT
Motif Score	3.28175
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: m6A_site_13192
mod ID: M6ASITE003962		Click to Show/Hide the Full List
mod site	chr1:22092266-22092267:+		[9]
Sequence	ACGCACTATATGTGACTGTGACTTTCAAGGACATTTGTTTG
Motif Score	3.28175
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000400259.5; ENST00000344548.7; ENST00000648594.1
External Link	RMBase: m6A_site_13193
mod ID: M6ASITE003963		Click to Show/Hide the Full List
mod site	chr1:22092276-22092277:+		[5]
Sequence	TGTGACTGTGACTTTCAAGGACATTTGTTTGCCATTTGCTG
Motif Score	3.643047619
Cell/Tissue List	HeLa; hESC-HEK293T
Seq Type List	m6A-seq; MAZTER-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: m6A_site_13194
mod ID: M6ASITE003964		Click to Show/Hide the Full List
mod site	chr1:22092485-22092486:+		[5]
Sequence	TTCCTAGAATGCAGCTGAAGACCTGTTATGTAGAGGAAATA
Motif Score	2.876744048
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000400259.5; ENST00000344548.7; ENST00000648594.1
External Link	RMBase: m6A_site_13195
mod ID: M6ASITE003965		Click to Show/Hide the Full List
mod site	chr1:22092525-22092526:+		[5]
Sequence	ACGAGGGGTGGTGCTAGAAGACAGACATCTGTGGAATGATT
Motif Score	2.897386905
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000648594.1; ENST00000344548.7; ENST00000400259.5
External Link	RMBase: m6A_site_13196
mod ID: M6ASITE003966		Click to Show/Hide the Full List
mod site	chr1:22092529-22092530:+		[9]
Sequence	GGGGTGGTGCTAGAAGACAGACATCTGTGGAATGATTCACA
Motif Score	2.897386905
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000648594.1; ENST00000344548.7; ENST00000400259.5
External Link	RMBase: m6A_site_13197
mod ID: M6ASITE003967		Click to Show/Hide the Full List
mod site	chr1:22092618-22092619:+		[9]
Sequence	GTAGGGTGGGGGTGGGGAGAACACTTAACAACATGGGGACC
Motif Score	2.951386905
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: m6A_site_13198
mod ID: M6ASITE003968		Click to Show/Hide the Full List
mod site	chr1:22092628-22092629:+		[12]
Sequence	GGTGGGGAGAACACTTAACAACATGGGGACCAGTCAGGGGA
Motif Score	2.173910714
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: m6A_site_13199
mod ID: M6ASITE003969		Click to Show/Hide the Full List
mod site	chr1:22092730-22092731:+		[5]
Sequence	TTAATAAAAATCATGGAAAGACTCTTAATGCAGACTCTTCT
Motif Score	3.319380952
Cell/Tissue List	HeLa; HEK293T
Seq Type List	m6A-seq; DART-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: m6A_site_13200
mod ID: M6ASITE003970		Click to Show/Hide the Full List
mod site	chr1:22092743-22092744:+		[5]
Sequence	TGGAAAGACTCTTAATGCAGACTCTTCTTAAGTGTTAATAG
Motif Score	3.319380952
Cell/Tissue List	HeLa; HEK293T
Seq Type List	m6A-seq; DART-seq
Transcript ID List	ENST00000344548.7; ENST00000648594.1; ENST00000400259.5
External Link	RMBase: m6A_site_13201
mod ID: M6ASITE003971		Click to Show/Hide the Full List
mod site	chr1:22092838-22092839:+		[5]
Sequence	AATCTTTCCCACCTTCCCAAACCTAATTCTTGTAGATGCAT
Motif Score	2.185083333
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: m6A_site_13202
mod ID: M6ASITE003972		Click to Show/Hide the Full List
mod site	chr1:22092868-22092869:+		[5]
Sequence	TGTAGATGCATTAGTGTTGAACCAATGCTTTCTCATGTCTC
Motif Score	2.930744048
Cell/Tissue List	HeLa; HEK293T
Seq Type List	m6A-seq; DART-seq
Transcript ID List	ENST00000400259.5; ENST00000648594.1; ENST00000344548.7
External Link	RMBase: m6A_site_13203
mod ID: M6ASITE003973		Click to Show/Hide the Full List
mod site	chr1:22092925-22092926:+		[5]
Sequence	ATTCTTTTCAGATGTATTAAACAAACAAAAACCCTTCACAA
Motif Score	2.20572619
Cell/Tissue List	HeLa; HEK293T; hESC-HEK293T
Seq Type List	m6A-seq; DART-seq; MAZTER-seq
Transcript ID List	ENST00000344548.7; ENST00000648594.1
External Link	RMBase: m6A_site_13204
mod ID: M6ASITE003974		Click to Show/Hide the Full List
mod site	chr1:22092929-22092930:+		[9]
Sequence	TTTTCAGATGTATTAAACAAACAAAAACCCTTCACAAGCCA
Motif Score	2.20572619
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000648594.1; ENST00000344548.7
External Link	RMBase: m6A_site_13205

Pseudouridine (Pseudo)

In total 2 m6A sequence/site(s) in this target gene
mod ID: PSESITE000311		Click to Show/Hide the Full List
mod site	chr1:22078544-22078545:+		[14]
Sequence	AAACATGTCTCCTGATATCCTACACAACAAACAAATTTCCA
Transcript ID List	ENST00000652582.1; ENST00000400259.5; ENST00000344548.7; ENST00000315554.12; ENST00000498236.1; ENST00000651171.1; ENST00000648594.1; ENST00000411827.1
External Link	RMBase: Pseudo_site_79
mod ID: PSESITE000312		Click to Show/Hide the Full List
mod site	chr1:22092495-22092496:+		[14]
Sequence	GCAGCTGAAGACCTGTTATGTAGAGGAAATACGAGGGGTGG
Transcript ID List	ENST00000344548.7; ENST00000400259.5; ENST00000648594.1
External Link	RMBase: Pseudo_site_80

Ref 1	Accurate identification of A-to-I RNA editing in human by transcriptome sequencing. Genome Res. 2012 Jan;22(1):142-50. doi: 10.1101/gr.124107.111. Epub 2011 Sep 29.
Ref 2	RADAR: a rigorously annotated database of A-to-I RNA editing. Nucleic Acids Res. 2014 Jan;42(Database issue):D109-13. doi: 10.1093/nar/gkt996. Epub 2013 Oct 25.
Ref 3	Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome. Nat Biotechnol. 2012 Feb 12;30(3):253-60. doi: 10.1038/nbt.2122.
Ref 4	5-methylcytosine promotes mRNA export - NSUN2 as the methyltransferase and ALYREF as an m(5)C reader. Cell Res. 2017 May;27(5):606-625. doi: 10.1038/cr.2017.55. Epub 2017 Apr 18.
Ref 5	VIRMA mediates preferential m(6)A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Cell Discov. 2018 Feb 27;4:10. doi: 10.1038/s41421-018-0019-0. eCollection 2018.
Ref 6	N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection. Cell Host Microbe. 2016 Nov 9;20(5):654-665. doi: 10.1016/j.chom.2016.09.015. Epub 2016 Oct 20.
Ref 7	Viral N(6)-methyladenosine upregulates replication and pathogenesis of human respiratory syncytial virus. Nat Commun. 2019 Oct 9;10(1):4595. doi: 10.1038/s41467-019-12504-y.
Ref 8	A majority of m6A residues are in the last exons, allowing the potential for 3' UTR regulation. Genes Dev. 2015 Oct 1;29(19):2037-53. doi: 10.1101/gad.269415.115. Epub 2015 Sep 24.
Ref 9	DART-seq: an antibody-free method for global m(6)A detection. Nat Methods. 2019 Dec;16(12):1275-1280. doi: 10.1038/s41592-019-0570-0. Epub 2019 Sep 23.
Ref 10	Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons. Cell. 2012 Jun 22;149(7):1635-46. doi: 10.1016/j.cell.2012.05.003. Epub 2012 May 17.
Ref 11	Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites. Cell Rep. 2014 Jul 10;8(1):284-96. doi: 10.1016/j.celrep.2014.05.048. Epub 2014 Jun 26.
Ref 12	Deciphering the "m(6)A Code" via Antibody-Independent Quantitative Profiling. Cell. 2019 Jul 25;178(3):731-747.e16. doi: 10.1016/j.cell.2019.06.013. Epub 2019 Jun 27.
Ref 13	Single-base mapping of m(6)A by an antibody-independent method. Sci Adv. 2019 Jul 3;5(7):eaax0250. doi: 10.1126/sciadv.aax0250. eCollection 2019 Jul.
Ref 14	Chemical pulldown reveals dynamic pseudouridylation of the mammalian transcriptome. Nat Chem Biol. 2015 Aug;11(8):592-7. doi: 10.1038/nchembio.1836. Epub 2015 Jun 15.

Epigenetic Target Information

Cite M6AREG

Correspondence

Prof. Feng ZHU

Prof. Shuiping Liu

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