General Information of the Epigenetic Target (ID: EPITAR00436)
Target Name Minichromosome maintenance complex component 3 (MCM3)
Synonyms
minichromosome maintenance deficient (S. cerevisiae) 3; MCM3 minichromosome maintenance deficient 3 (S. cerevisiae)
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Gene Name MCM3
Sequence
MAGTVVLDDVELREAQRDYLDFLDDEEDQGIYQSKVRELISDNQYRLIVNVNDLRRKNEKRANRLLNNAFEELVAFQRALKDFVASIDATYAKQYEEFYVGLEGSFGSKHVSPRTLTSCFLSCVVCVEGIVTKCSLVRPKVVRSVHYCPATKKTIERRYSDLTTLVAFPSSSVYPTKDEENNPLETEYGLSVYKDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKGGYTSGTFRTVLIACNVKQMSKDAQPSFSAEDIAKIKKFSKTRSKDIFDQLAKSLAPSIHGHDYVKKAILCLLLGGVERDLENGSHIRGDINILLIGDPSVAKSQLLRYVLCTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDMDRTAIHEVMEQGRVTIAKAGIHARLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFIMLDQMDPEQDREISDHVLRMHRYRAPGEQDGDAMPLGSAVDILATDDPNFSQEDQQDTQIYEKHDNLLHGTKKKKEKMVSAAFMKKYIHVAKIIKPVLTQESATYIAEEYSRLRSQDSMSSDTARTSPVTARTLETLIRLATAHAKARMSKTVDLQDAEEAVELVQYAYFKKVLEKEKKRKKRSEDESETEDEEEKSQEDQEQKRKRRKTRQPDAKDGDSYDPYDFSDTEEEMPQVHTPKTADSQETKESQKVELSESRLKAFKVALLDVFREAHAQSIGMNRLTESINRDSEEPFSSVEIQAALSKMQDDNQVMVSEGIIFLI
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Family MCM family
Function
Acts as a component of the MCM2-7 complex (MCM complex) which is the replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. Core component of CDC45-MCM-GINS (CMG) helicase, the molecular machine that unwinds template DNA during replication, and around which the replisome is built (PubMed:32453425, PubMed:34694004, PubMed:34700328, PubMed:35585232). The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity (PubMed:32453425). Required for the entry in S phase and for cell division (Probable).
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Gene ID 4172
HGNC ID HGNC:6945
Ensembl Gene ID ENSG00000112118
KEGG ID hsa:4172
Chromosomal Location 6p12.2
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00436)
Minichromosome maintenance complex component 3 (MCM3)
5-methylcytidine (m5C)
In total 5 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004026 Click to Show/Hide the Full List
mod site chr6:52267580-52267581:-
Sequence GAACCAGGATCGTGCCACTGCACTCCAGCCTGGGCGACAGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000419835.8; ENST00000421471.1; ENST00000229854.12; ENST00000596288.6; ENST00000616552.4; rmsk_1949203
External Link RMBase: m5C_site_38196
mod ID: M5CSITE004027 Click to Show/Hide the Full List
mod site chr6:52274992-52274993:-
Sequence GGTGGGAGGATCACTTGAGCCTAGGAGTTTGAGACCAACCT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000229854.12; ENST00000616552.4; rmsk_1949218; ENST00000419835.8; ENST00000596288.6
External Link RMBase: m5C_site_38197
mod ID: M5CSITE004028 Click to Show/Hide the Full List
mod site chr6:52274993-52274994:-
Sequence AGGTGGGAGGATCACTTGAGCCTAGGAGTTTGAGACCAACC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000229854.12; ENST00000419835.8; rmsk_1949218; ENST00000596288.6; ENST00000616552.4
External Link RMBase: m5C_site_38198
mod ID: M5CSITE004029 Click to Show/Hide the Full List
mod site chr6:52274999-52275000:-
Sequence AGGCTGAGGTGGGAGGATCACTTGAGCCTAGGAGTTTGAGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List rmsk_1949218; ENST00000616552.4; ENST00000596288.6; ENST00000419835.8; ENST00000229854.12
External Link RMBase: m5C_site_38199
mod ID: M5CSITE004031 Click to Show/Hide the Full List
mod site chr6:52275001-52275002:-
Sequence GGAGGCTGAGGTGGGAGGATCACTTGAGCCTAGGAGTTTGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000596288.6; ENST00000419835.8; ENST00000229854.12; ENST00000616552.4; rmsk_1949218
External Link RMBase: m5C_site_38200
N6-methyladenosine (m6A)
In total 57 m6A sequence/site(s) in this target gene
mod ID: M6ASITE075397 Click to Show/Hide the Full List
mod site chr6:52264036-52264037:- [1]
Sequence ATATCCGAGATGTTGAATAAACTTAGCCATTTCGTACACAT
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T; Huh7
Seq Type List m6A-seq; DART-seq; MeRIP-seq
Transcript ID List ENST00000596288.6; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720273
mod ID: M6ASITE075398 Click to Show/Hide the Full List
mod site chr6:52264077-52264078:- [1]
Sequence AATATGTATTGTATCACAAAACAAACCCAATATCCAGATGA
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; HepG2; Huh7
Seq Type List m6A-seq; DART-seq; MeRIP-seq
Transcript ID List ENST00000596288.6; ENST00000229854.12; ENST00000616552.4
External Link RMBase: m6A_site_720274
mod ID: M6ASITE075399 Click to Show/Hide the Full List
mod site chr6:52264082-52264083:- [2]
Sequence AGGTGAATATGTATTGTATCACAAAACAAACCCAATATCCA
Motif Score 2.047297619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000596288.6; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720275
mod ID: M6ASITE075400 Click to Show/Hide the Full List
mod site chr6:52264147-52264148:- [2]
Sequence GTGGAGAGAAGCTCTGAGGCACGTCATGCAGGTCAAGAAAG
Motif Score 2.80452381
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000596288.6; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720276
mod ID: M6ASITE075401 Click to Show/Hide the Full List
mod site chr6:52264192-52264193:- [1]
Sequence TCCAGAGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCA
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; GM12878; LCLs; H1299; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; iSLK; MSC; TIME; TREX; HEC-1-A; GSCs; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000596288.6; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720277
mod ID: M6ASITE075402 Click to Show/Hide the Full List
mod site chr6:52264252-52264253:- [2]
Sequence TGAGTACTTTTGGGGGCACAACTGTTTTCTGTTTGCTGTTT
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000596288.6; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720278
mod ID: M6ASITE075403 Click to Show/Hide the Full List
mod site chr6:52264267-52264268:- [2]
Sequence ATAACATATGACTTCTGAGTACTTTTGGGGGCACAACTGTT
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000229854.12; ENST00000596288.6; ENST00000616552.4
External Link RMBase: m6A_site_720279
mod ID: M6ASITE075404 Click to Show/Hide the Full List
mod site chr6:52264277-52264278:- [2]
Sequence CCAATTGTAAATAACATATGACTTCTGAGTACTTTTGGGGG
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000229854.12; ENST00000596288.6; ENST00000616552.4
External Link RMBase: m6A_site_720280
mod ID: M6ASITE075405 Click to Show/Hide the Full List
mod site chr6:52264284-52264285:- [3]
Sequence CACAAACCCAATTGTAAATAACATATGACTTCTGAGTACTT
Motif Score 2.168095238
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000229854.12; ENST00000616552.4; ENST00000596288.6
External Link RMBase: m6A_site_720281
mod ID: M6ASITE075406 Click to Show/Hide the Full List
mod site chr6:52264299-52264300:- [1]
Sequence CTACTTCCCATCCCACACAAACCCAATTGTAAATAACATAT
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000596288.6; ENST00000229854.12; ENST00000616552.4
External Link RMBase: m6A_site_720282
mod ID: M6ASITE075407 Click to Show/Hide the Full List
mod site chr6:52264303-52264304:- [2]
Sequence CGCCCTACTTCCCATCCCACACAAACCCAATTGTAAATAAC
Motif Score 2.084928571
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000229854.12; ENST00000596288.6; ENST00000616552.4
External Link RMBase: m6A_site_720283
mod ID: M6ASITE075408 Click to Show/Hide the Full List
mod site chr6:52264359-52264360:- [3]
Sequence GACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAA
Motif Score 3.28175
Cell/Tissue List A549; AML
Seq Type List m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000596288.6; ENST00000229854.12; ENST00000616552.4
External Link RMBase: m6A_site_720284
mod ID: M6ASITE075409 Click to Show/Hide the Full List
mod site chr6:52264365-52264366:- [1]
Sequence AGAGGAGACAGTGGGAGAGGACAATGACTATTGCATCTTCA
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000616552.4; ENST00000596288.6; ENST00000229854.12
External Link RMBase: m6A_site_720285
mod ID: M6ASITE075410 Click to Show/Hide the Full List
mod site chr6:52264378-52264379:- [1]
Sequence ATGGGGTGAGGAAAGAGGAGACAGTGGGAGAGGACAATGAC
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq; m6A-CLIP/IP
Transcript ID List ENST00000616552.4; ENST00000229854.12; ENST00000596288.6
External Link RMBase: m6A_site_720286
mod ID: M6ASITE075411 Click to Show/Hide the Full List
mod site chr6:52264428-52264429:- [1]
Sequence CTGAGTTCAGGACTCGGTGGACCCTTTGGGAATGGGTCATG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000596288.6; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720287
mod ID: M6ASITE075412 Click to Show/Hide the Full List
mod site chr6:52264437-52264438:- [1]
Sequence GTGATGAAGCTGAGTTCAGGACTCGGTGGACCCTTTGGGAA
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000616552.4; ENST00000229854.12; ENST00000596288.6
External Link RMBase: m6A_site_720288
mod ID: M6ASITE075413 Click to Show/Hide the Full List
mod site chr6:52264569-52264570:- [1]
Sequence TGAGGAGGCCTCGTCTCTGAACTTGGGTTGTGCCGAGAGAG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; GM12878; peripheral-blood; GSC-11; HEK293A-TOA; TIME; endometrial; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000596288.6; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720289
mod ID: M6ASITE075414 Click to Show/Hide the Full List
mod site chr6:52264690-52264691:- [1]
Sequence CACAGAATCCATCAACCGGGACAGCGAAGAGCCCTTCTCTT
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; peripheral-blood; HEK293T; endometrial; NB4; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000419835.8; ENST00000596288.6; ENST00000616552.4; ENST00000229854.12; ENST00000421471.1
External Link RMBase: m6A_site_720290
mod ID: M6ASITE075415 Click to Show/Hide the Full List
mod site chr6:52265347-52265348:- [1]
Sequence GTTGCCCAGGCTGGTCTTGGACTCCTGGCCTCAAGCAGTCC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; peripheral-blood; NB4
Seq Type List m6A-seq
Transcript ID List ENST00000421471.1; ENST00000419835.8; ENST00000616552.4; ENST00000596288.6; ENST00000229854.12
External Link RMBase: m6A_site_720291
mod ID: M6ASITE075416 Click to Show/Hide the Full List
mod site chr6:52266111-52266112:- [1]
Sequence AGACGGCAGACTCACAGGAGACCAAGGAATCCCAGAAAGTG
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; LCLs; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000419835.8; ENST00000596288.6; ENST00000229854.12; ENST00000421471.1; ENST00000616552.4
External Link RMBase: m6A_site_720292
mod ID: M6ASITE075417 Click to Show/Hide the Full List
mod site chr6:52266122-52266123:- [1]
Sequence ACACACTCCAAAGACGGCAGACTCACAGGAGACCAAGGAAT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; LCLs; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000596288.6; ENST00000419835.8; ENST00000229854.12; ENST00000616552.4; ENST00000421471.1
External Link RMBase: m6A_site_720293
mod ID: M6ASITE075418 Click to Show/Hide the Full List
mod site chr6:52266688-52266689:- [1]
Sequence GTGGGTATTTTAGAAGGAAGACTCGCCAGCCAGATGCCAAA
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HepG2; H1A; hNPCs; hESCs; HEK293T; fibroblasts; A549; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000616552.4; ENST00000596288.6; ENST00000229854.12; ENST00000421471.1; ENST00000419835.8
External Link RMBase: m6A_site_720294
mod ID: M6ASITE075419 Click to Show/Hide the Full List
mod site chr6:52267885-52267886:- [1]
Sequence AGAGGAGAAAAGCCAAGAGGACCAGGAGCAGAAGAGGAAGA
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; H1A; hNPCs; hESCs; HEK293T; fibroblasts; A549; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000229854.12; ENST00000616552.4; ENST00000421471.1; ENST00000419835.8; ENST00000596288.6
External Link RMBase: m6A_site_720295
mod ID: M6ASITE075420 Click to Show/Hide the Full List
mod site chr6:52267916-52267917:- [1]
Sequence GAAGTGAGGATGAATCAGAGACAGAAGATGAAGAGGAGAAA
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; H1A; hNPCs; hESCs; HEK293T; fibroblasts; A549; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000229854.12; ENST00000419835.8; ENST00000421471.1; ENST00000596288.6; ENST00000616552.4
External Link RMBase: m6A_site_720296
mod ID: M6ASITE075421 Click to Show/Hide the Full List
mod site chr6:52269140-52269141:- [1]
Sequence CCGCATGAGCAAGACTGTGGACCTGCAGGATGCAGAGGAAG
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; H1299; MM6; Huh7; peripheral-blood
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000229854.12; ENST00000419835.8; ENST00000421471.1; ENST00000596288.6; ENST00000616552.4
External Link RMBase: m6A_site_720297
mod ID: M6ASITE075422 Click to Show/Hide the Full List
mod site chr6:52269147-52269148:- [1]
Sequence CGAAGGCCCGCATGAGCAAGACTGTGGACCTGCAGGATGCA
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HepG2; H1299; MM6; Huh7; peripheral-blood
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000229854.12; ENST00000616552.4; ENST00000421471.1; ENST00000596288.6; ENST00000419835.8
External Link RMBase: m6A_site_720298
mod ID: M6ASITE075423 Click to Show/Hide the Full List
mod site chr6:52269195-52269196:- [1]
Sequence TTACAGCCCGAACACTGGAAACTCTGATTCGACTGGCCACA
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HepG2; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000616552.4; ENST00000229854.12; ENST00000421471.1; ENST00000419835.8; ENST00000596288.6
External Link RMBase: m6A_site_720299
mod ID: M6ASITE075425 Click to Show/Hide the Full List
mod site chr6:52269204-52269205:- [1]
Sequence CATCTCCAGTTACAGCCCGAACACTGGAAACTCTGATTCGA
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000421471.1; ENST00000616552.4; ENST00000229854.12; ENST00000596288.6; ENST00000419835.8
External Link RMBase: m6A_site_720300
mod ID: M6ASITE075426 Click to Show/Hide the Full List
mod site chr6:52272310-52272311:- [1]
Sequence CCAGGATAGCATGAGCTCAGACACCGCCAGGGTGAGTGCCT
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000596288.6; ENST00000421471.1; ENST00000419835.8; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720301
mod ID: M6ASITE075427 Click to Show/Hide the Full List
mod site chr6:52273242-52273243:- [1]
Sequence ATGACAACCTTCTACATGGGACCAAGAAGAAAAAGTGAGCA
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000419835.8; ENST00000616552.4; ENST00000596288.6; ENST00000229854.12; ENST00000421471.1
External Link RMBase: m6A_site_720302
mod ID: M6ASITE075428 Click to Show/Hide the Full List
mod site chr6:52273259-52273260:- [2]
Sequence CCAGATTTATGAGAAGCATGACAACCTTCTACATGGGACCA
Motif Score 2.859755952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000229854.12; ENST00000616552.4; ENST00000421471.1; ENST00000419835.8; ENST00000596288.6
External Link RMBase: m6A_site_720303
mod ID: M6ASITE075429 Click to Show/Hide the Full List
mod site chr6:52273283-52273284:- [1]
Sequence TAGCCAGGAAGATCAGCAGGACACCCAGATTTATGAGAAGC
Motif Score 3.643047619
Cell/Tissue List HeLa; AML
Seq Type List m6A-seq; miCLIP
Transcript ID List ENST00000229854.12; ENST00000616552.4; ENST00000421471.1; ENST00000596288.6; ENST00000419835.8
External Link RMBase: m6A_site_720304
mod ID: M6ASITE075430 Click to Show/Hide the Full List
mod site chr6:52273794-52273795:- [1]
Sequence GCAGGATCGGGAGATCTCAGACCATGTCCTTCGGATGCACC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000616552.4; ENST00000229854.12; ENST00000596288.6; ENST00000419835.8
External Link RMBase: m6A_site_720305
mod ID: M6ASITE075431 Click to Show/Hide the Full List
mod site chr6:52273872-52273873:- [1]
Sequence GGAGAACATTGGGCTACAGGACTCACTGCTGTCACGATTTG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000419835.8; ENST00000229854.12; ENST00000596288.6; ENST00000616552.4
External Link RMBase: m6A_site_720306
mod ID: M6ASITE075432 Click to Show/Hide the Full List
mod site chr6:52273887-52273888:- [1]
Sequence GTATAAGACTCCAATGGAGAACATTGGGCTACAGGACTCAC
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000419835.8; ENST00000596288.6; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720307
mod ID: M6ASITE075433 Click to Show/Hide the Full List
mod site chr6:52273900-52273901:- [1]
Sequence CCCAGTATGACCAGTATAAGACTCCAATGGAGAACATTGGG
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000596288.6; ENST00000616552.4; ENST00000419835.8; ENST00000229854.12
External Link RMBase: m6A_site_720308
mod ID: M6ASITE075434 Click to Show/Hide the Full List
mod site chr6:52275992-52275993:- [1]
Sequence ACCGTCCATTAAATAAAAGGACTACATGCATGTGGCGGGAG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000229854.12; ENST00000596288.6; ENST00000476448.1; ENST00000419835.8; ENST00000616552.4
External Link RMBase: m6A_site_720309
mod ID: M6ASITE075435 Click to Show/Hide the Full List
mod site chr6:52276033-52276034:- [1]
Sequence CTTTTTAACAGTACAGTTAAACAGTCCATTTAACATATTTA
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000616552.4; ENST00000476448.1; ENST00000229854.12; ENST00000419835.8; ENST00000596288.6
External Link RMBase: m6A_site_720310
mod ID: M6ASITE075436 Click to Show/Hide the Full List
mod site chr6:52277069-52277070:- [1]
Sequence CTGTCACCACAGACCAGGAAACAGGTAAGGGTGTAAGGGTC
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293
Seq Type List m6A-seq; m6A-REF-seq
Transcript ID List ENST00000616552.4; ENST00000419835.8; ENST00000229854.12; ENST00000596288.6; ENST00000476448.1
External Link RMBase: m6A_site_720311
mod ID: M6ASITE075437 Click to Show/Hide the Full List
mod site chr6:52277077-52277078:- [1]
Sequence GACGGCTGCTGTCACCACAGACCAGGAAACAGGTAAGGGTG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000596288.6; ENST00000419835.8; ENST00000476448.1; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720312
mod ID: M6ASITE075438 Click to Show/Hide the Full List
mod site chr6:52277194-52277195:- [1]
Sequence CTGCCCCCACCCTACAGGAGACCCATCCGTTGCCAAGTCTC
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000596288.6; ENST00000476448.1; ENST00000419835.8; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720313
mod ID: M6ASITE075439 Click to Show/Hide the Full List
mod site chr6:52277554-52277555:- [1]
Sequence TGGCAGCCACATCCGTGGGGACATCAATATTCTTCTAATAG
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000616552.4; ENST00000419835.8; ENST00000596288.6; ENST00000476448.1; ENST00000229854.12
External Link RMBase: m6A_site_720314
mod ID: M6ASITE075440 Click to Show/Hide the Full List
mod site chr6:52277584-52277585:- [1]
Sequence CTTGGGAGGGGTGGAACGAGACCTAGAAAATGGCAGCCACA
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000616552.4; ENST00000419835.8; ENST00000596288.6; ENST00000229854.12; ENST00000476448.1
External Link RMBase: m6A_site_720315
mod ID: M6ASITE075441 Click to Show/Hide the Full List
mod site chr6:52278752-52278753:- [1]
Sequence AGATCAAGAAGTTCAGTAAAACCCGATCCAAGGTCTGGGCA
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000476448.1; ENST00000616552.4; ENST00000229854.12; ENST00000419835.8; ENST00000596288.6
External Link RMBase: m6A_site_720316
mod ID: M6ASITE075442 Click to Show/Hide the Full List
mod site chr6:52279367-52279368:- [1]
Sequence AGGGAGGCTACACCTCTGGGACCTTCAGGTAAAGGGTCTGC
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34
Seq Type List m6A-seq
Transcript ID List ENST00000616552.4; ENST00000476448.1; ENST00000229854.12; ENST00000419835.8; ENST00000596288.6
External Link RMBase: m6A_site_720317
mod ID: M6ASITE075443 Click to Show/Hide the Full List
mod site chr6:52279412-52279413:- [1]
Sequence ACCGGGTTCAGGTGGTGGGAACCTACCGTTGCCTTCCTGGA
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34
Seq Type List m6A-seq
Transcript ID List ENST00000419835.8; ENST00000476448.1; ENST00000596288.6; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720318
mod ID: M6ASITE075444 Click to Show/Hide the Full List
mod site chr6:52279538-52279539:- [1]
Sequence CTGTCTACAAGGATCACCAGACCATCACCATCCAGGAGATG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000229854.12; ENST00000596288.6; ENST00000419835.8; ENST00000616552.4
External Link RMBase: m6A_site_720319
mod ID: M6ASITE075445 Click to Show/Hide the Full List
mod site chr6:52279574-52279575:- [1]
Sequence AGGAGAACAATCCCCTTGAGACAGAATATGGCCTTTCTGTC
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000419835.8; ENST00000596288.6; ENST00000229854.12; ENST00000616552.4
External Link RMBase: m6A_site_720320
mod ID: M6ASITE075446 Click to Show/Hide the Full List
mod site chr6:52279588-52279589:- [1]
Sequence CTTTTTCTAGGATGAGGAGAACAATCCCCTTGAGACAGAAT
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000419835.8; ENST00000596288.6; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720321
mod ID: M6ASITE075447 Click to Show/Hide the Full List
mod site chr6:52282115-52282116:- [1]
Sequence ACTGTCCTGCTACTAAGAAGACCATAGAGCGACGTTATTCT
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000616552.4; ENST00000229854.12; ENST00000419835.8; ENST00000596288.6
External Link RMBase: m6A_site_720322
mod ID: M6ASITE075448 Click to Show/Hide the Full List
mod site chr6:52282709-52282710:- [1]
Sequence CCAAGCACGTCTCCCCGCGGACTCTTACCTCCTGCTTCCTC
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000419835.8; ENST00000616552.4; ENST00000596288.6; ENST00000229854.12
External Link RMBase: m6A_site_720323
mod ID: M6ASITE075449 Click to Show/Hide the Full List
mod site chr6:52282749-52282750:- [1]
Sequence TATGAGGAGTTCTACGTAGGACTGGAAGGCAGCTTTGGCTC
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000596288.6; ENST00000229854.12; ENST00000616552.4; ENST00000419835.8
External Link RMBase: m6A_site_720324
mod ID: M6ASITE075450 Click to Show/Hide the Full List
mod site chr6:52282852-52282853:- [1]
Sequence GCTTATGTACAGGCTTCTGAACAATGCCTTTGAGGAGCTGG
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000419835.8; ENST00000596288.6; ENST00000616552.4; ENST00000229854.12
External Link RMBase: m6A_site_720325
mod ID: M6ASITE075451 Click to Show/Hide the Full List
mod site chr6:52283401-52283402:- [1]
Sequence GGTGGCTGTTTTGCAGGAAGACCAGGGAATTTATCAGAGCA
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; MT4; MM6; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000229854.12; ENST00000596288.6; ENST00000616552.4; ENST00000419835.8
External Link RMBase: m6A_site_720326
mod ID: M6ASITE075452 Click to Show/Hide the Full List
mod site chr6:52284612-52284613:- [1]
Sequence GGCTCAGAGAGATTACCTGGACTTCCTGGACGACGAGGTGA
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; MT4; MM6; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000419835.8; ENST00000229854.12; ENST00000596288.6; ENST00000616552.4
External Link RMBase: m6A_site_720327
mod ID: M6ASITE075453 Click to Show/Hide the Full List
mod site chr6:52284716-52284717:- [1]
Sequence GGGGTGGAGTCATCCTGGGAACCTCCACGCGACTTTGGTGG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; H1B; MT4; MM6; Jurkat; CD4T; HEK293A-TOA; MSC; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000419835.8; ENST00000229854.12; ENST00000616552.4; ENST00000596288.6
External Link RMBase: m6A_site_720328
mod ID: M6ASITE075454 Click to Show/Hide the Full List
mod site chr6:52284831-52284832:- [1]
Sequence CGCTAGTCCGACCTCAGAGAACTCAGCCAATCATAATGCTT
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000616552.4; ENST00000229854.12; ENST00000419835.8; ENST00000596288.6
External Link RMBase: m6A_site_720329
2'-O-Methylation (2'-O-Me)
In total 2 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000405 Click to Show/Hide the Full List
mod site chr6:52278837-52278838:- [4]
Sequence TGTCCCAGGACTGTCCTGATTGCCTGTAATGTTAAGCAGAT
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000596288.6; ENST00000419835.8; ENST00000476448.1; ENST00000229854.12; ENST00000616552.4
External Link RMBase: Nm_site_5850
mod ID: 2OMSITE000406 Click to Show/Hide the Full List
mod site chr6:52284647-52284648:- [4]
Sequence GGTACCGTGGTGCTGGACGATGTGGAGCTGCGGGAGGCTCA
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000419835.8; ENST00000596288.6; ENST00000229854.12; ENST00000616552.4
External Link RMBase: Nm_site_5851
Pseudouridine (Pseudo)
In total 1 m6A sequence/site(s) in this target gene
mod ID: PSESITE000235 Click to Show/Hide the Full List
mod site chr6:52264067-52264068:- [5]
Sequence GTATCACAAAACAAACCCAATATCCAGATGAATATCCGAGA
Transcript ID List ENST00000616552.4; ENST00000596288.6; ENST00000229854.12
External Link RMBase: Pseudo_site_4261