Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00434)
Target Name Peroxisome proliferator-activated receptor gamma (PPARG)
Synonyms
PPAR-gamma; Nuclear receptor subfamily 1 group C member 3
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Gene Name PPARG
Sequence
MGETLGDSPIDPESDSFTDTLSANISQEMTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
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Family Nuclear hormone receptor family, NR1 subfamily
Function
Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut homeostasis by suppressing NF-kappa-B-mediated pro-inflammatory responses. Plays a role in the regulation of cardiovascular circadian rhythms by regulating the transcription of ARNTL/BMAL1 in the blood vessels (By similarity); (Microbial infection) Upon treatment with M.tuberculosis or its lipoprotein LpqH, phosphorylation of MAPK p38 and IL-6 production are modulated, probably via this protein.
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Gene ID 5468
HGNC ID HGNC:9236
Ensembl Gene ID ENSG00000132170
KEGG ID hsa:5468
Chromosomal Location 3p25.2
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00434)
Peroxisome proliferator-activated receptor gamma (PPARG)
Adenosine-to-Inosine editing (A-to-I)
In total 4 m6A sequence/site(s) in this target gene
mod ID: A2ISITE011524 Click to Show/Hide the Full List
mod site chr3:12308289-12308290:+ [1]
Sequence GGTGGTTGAGGCTACAGTGAACCATGATCACACCACTGTAC
Transcript ID List ENST00000397026.7; ENST00000651826.1; ENST00000497594.5; ENST00000651735.1; ENST00000397010.7; ENST00000652098.1; ENST00000643197.2; rmsk_889664; ENST00000397015.7; ENST00000455517.6; ENST00000652431.1; ENST00000643888.2; ENST00000438682.6; ENST00000650761.1; ENST00000397012.7; ENST00000644622.2; ENST00000309576.11; ENST00000652522.1; ENST00000397029.8
External Link RMBase: RNA-editing_site_94775
mod ID: A2ISITE011525 Click to Show/Hide the Full List
mod site chr3:12329055-12329056:+ [1]
Sequence ATCCCAGCCCAGGTGGGCCAATTATTCAATTTTCAAGAATT
Transcript ID List ENST00000651826.1; rmsk_889699; ENST00000397015.7; ENST00000643888.2; ENST00000397010.7; ENST00000651735.1; ENST00000652522.1; ENST00000644622.2; ENST00000397029.8; ENST00000455517.6; ENST00000397000.6; ENST00000309576.11; ENST00000643197.2; ENST00000438682.6; ENST00000497594.5; ENST00000397012.7; ENST00000650761.1; ENST00000652431.1; ENST00000397026.7; ENST00000652098.1
External Link RMBase: RNA-editing_site_94776
mod ID: A2ISITE011526 Click to Show/Hide the Full List
mod site chr3:12388070-12388071:+ [1]
Sequence GAGAAGTCAAGGAATATCATAAAATATCTATGATCACAATG
Transcript ID List ENST00000397023.5; ENST00000287820.10; ENST00000650840.1; ENST00000650650.1; ENST00000643197.2; ENST00000652431.1; ENST00000643888.2; ENST00000397010.7; ENST00000644622.2; ENST00000397026.7; ENST00000396999.3; ENST00000497594.5; ENST00000652522.1; ENST00000397000.6; ENST00000397015.7; ENST00000309576.11; ENST00000651826.1; ENST00000477039.5; ENST00000651735.1; ENST00000397012.7; ENST00000652098.1; ENST00000650761.1
External Link RMBase: RNA-editing_site_94777
mod ID: A2ISITE011527 Click to Show/Hide the Full List
mod site chr3:12418447-12418448:+ [1]
Sequence GGGGGATAGTGGTAAACTGTATATAACTGCACAATGTATTA
Transcript ID List ENST00000643197.2; ENST00000309576.11; ENST00000651735.1; ENST00000397023.5; ENST00000397015.7; ENST00000396999.3; ENST00000397026.7; ENST00000397000.6; ENST00000397012.7; ENST00000650840.1; ENST00000650761.1; ENST00000652098.1; ENST00000397010.7; ENST00000652431.1; ENST00000643888.2; ENST00000651826.1; ENST00000287820.10; ENST00000644622.2
External Link RMBase: RNA-editing_site_94778
N6-methyladenosine (m6A)
In total 37 m6A sequence/site(s) in this target gene
mod ID: M6ASITE059564 Click to Show/Hide the Full List
mod site chr3:12287984-12287985:+ [2]
Sequence CGCTTGGGTCGGCCTCGAGGACACCGGAGAGGGGCGCCACG
Motif Score 3.643047619
Cell/Tissue List HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000643197.2; ENST00000397029.8; ENST00000397010.7; ENST00000643888.2; ENST00000309576.11; ENST00000651826.1; ENST00000397015.7; ENST00000650761.1
External Link RMBase: m6A_site_577271
mod ID: M6ASITE059565 Click to Show/Hide the Full List
mod site chr3:12328186-12328187:+ [3]
Sequence AGCGAAGAAAAAATTAAAGAACTAGAACAGAAAAAGTCCTA
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000652098.1; ENST00000455517.6; ENST00000397026.7; ENST00000652522.1; ENST00000497594.5; ENST00000652431.1; ENST00000397012.7; ENST00000651735.1; ENST00000397029.8; ENST00000309576.11; ENST00000397000.6; ENST00000419844.1; ENST00000397010.7; ENST00000650761.1; ENST00000643197.2; ENST00000438682.6; ENST00000644622.2; ENST00000651826.1; ENST00000397015.7; ENST00000643888.2
External Link RMBase: m6A_site_577272
mod ID: M6ASITE059566 Click to Show/Hide the Full List
mod site chr3:12328192-12328193:+ [3]
Sequence GAAAAAATTAAAGAACTAGAACAGAAAAAGTCCTACCTGGA
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000652522.1; ENST00000651735.1; ENST00000455517.6; ENST00000643888.2; ENST00000643197.2; ENST00000397026.7; ENST00000652098.1; ENST00000397029.8; ENST00000397010.7; ENST00000652431.1; ENST00000651826.1; ENST00000497594.5; ENST00000397000.6; ENST00000419844.1; ENST00000309576.11; ENST00000438682.6; ENST00000644622.2; ENST00000650761.1; ENST00000397012.7; ENST00000397015.7
External Link RMBase: m6A_site_577273
mod ID: M6ASITE059567 Click to Show/Hide the Full List
mod site chr3:12379745-12379746:+ [4]
Sequence GATGCCATTCTGGCCCACCAACTTTGGGATCAGCTCCGTGG
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000309576.11; ENST00000651735.1; ENST00000644622.2; ENST00000397015.7; ENST00000652431.1; ENST00000397010.7; ENST00000397029.8; ENST00000652522.1; ENST00000438682.6; ENST00000455517.6; ENST00000643197.2; ENST00000397026.7; ENST00000643888.2; ENST00000397023.5; ENST00000396999.3; ENST00000650840.1; ENST00000650761.1; ENST00000287820.10; ENST00000497594.5; ENST00000652098.1; ENST00000477039.5; ENST00000397000.6; ENST00000650650.1; ENST00000397012.7; ENST00000651826.1
External Link RMBase: m6A_site_577274
mod ID: M6ASITE059568 Click to Show/Hide the Full List
mod site chr3:12379784-12379785:+ [3]
Sequence GGATCTCTCCGTAATGGAAGACCACTCCCACTCCTTTGATA
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000497594.5; ENST00000396999.3; ENST00000287820.10; ENST00000397026.7; ENST00000651826.1; ENST00000652431.1; ENST00000644622.2; ENST00000652522.1; ENST00000397015.7; ENST00000438682.6; ENST00000455517.6; ENST00000643888.2; ENST00000650840.1; ENST00000477039.5; ENST00000397000.6; ENST00000651735.1; ENST00000397029.8; ENST00000643197.2; ENST00000397023.5; ENST00000397012.7; ENST00000650761.1; ENST00000650650.1; ENST00000397010.7; ENST00000652098.1; ENST00000309576.11
External Link RMBase: m6A_site_577275
mod ID: M6ASITE059569 Click to Show/Hide the Full List
mod site chr3:12379848-12379849:+ [5]
Sequence TTCTCCAGCATTTCTACTCCACATTACGAAGACATTCCATT
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000650761.1; ENST00000309576.11; ENST00000652522.1; ENST00000644622.2; ENST00000397015.7; ENST00000397000.6; ENST00000643197.2; ENST00000396999.3; ENST00000643888.2; ENST00000497594.5; ENST00000652098.1; ENST00000652431.1; ENST00000650650.1; ENST00000397012.7; ENST00000397029.8; ENST00000651735.1; ENST00000287820.10; ENST00000477039.5; ENST00000397026.7; ENST00000397023.5; ENST00000650840.1; ENST00000651826.1; ENST00000438682.6; ENST00000397010.7
External Link RMBase: m6A_site_577276
mod ID: M6ASITE059570 Click to Show/Hide the Full List
mod site chr3:12379859-12379860:+ [3]
Sequence TTCTACTCCACATTACGAAGACATTCCATTCACAAGAACAG
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000397015.7; ENST00000397026.7; ENST00000497594.5; ENST00000309576.11; ENST00000651735.1; ENST00000397012.7; ENST00000396999.3; ENST00000438682.6; ENST00000652522.1; ENST00000477039.5; ENST00000650840.1; ENST00000643197.2; ENST00000652098.1; ENST00000643888.2; ENST00000651826.1; ENST00000650761.1; ENST00000644622.2; ENST00000652431.1; ENST00000397029.8; ENST00000287820.10; ENST00000397010.7; ENST00000650650.1; ENST00000397000.6; ENST00000397023.5
External Link RMBase: m6A_site_577277
mod ID: M6ASITE059571 Click to Show/Hide the Full List
mod site chr3:12379876-12379877:+ [3]
Sequence AAGACATTCCATTCACAAGAACAGATCCAGTGGTTGCAGAT
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000650761.1; ENST00000652431.1; ENST00000397010.7; ENST00000652522.1; ENST00000652098.1; ENST00000397023.5; ENST00000650650.1; ENST00000397000.6; ENST00000497594.5; ENST00000651826.1; ENST00000643197.2; ENST00000644622.2; ENST00000397012.7; ENST00000651735.1; ENST00000396999.3; ENST00000650840.1; ENST00000397026.7; ENST00000643888.2; ENST00000287820.10; ENST00000397029.8; ENST00000309576.11; ENST00000477039.5; ENST00000397015.7; ENST00000438682.6
External Link RMBase: m6A_site_577278
mod ID: M6ASITE059572 Click to Show/Hide the Full List
mod site chr3:12379898-12379899:+ [5]
Sequence AGATCCAGTGGTTGCAGATTACAAGTATGACCTGAAACTTC
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000650761.1; ENST00000397026.7; ENST00000652098.1; ENST00000497594.5; ENST00000397029.8; ENST00000651735.1; ENST00000396999.3; ENST00000652431.1; ENST00000397012.7; ENST00000477039.5; ENST00000650840.1; ENST00000644622.2; ENST00000651826.1; ENST00000650650.1; ENST00000309576.11; ENST00000652522.1; ENST00000643888.2; ENST00000287820.10; ENST00000397023.5; ENST00000397000.6; ENST00000643197.2; ENST00000438682.6; ENST00000397010.7; ENST00000397015.7
External Link RMBase: m6A_site_577279
mod ID: M6ASITE059573 Click to Show/Hide the Full List
mod site chr3:12379914-12379915:+ [3]
Sequence GATTACAAGTATGACCTGAAACTTCAAGAGTACCAAAGTAT
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000643888.2; ENST00000650761.1; ENST00000397029.8; ENST00000397012.7; ENST00000650650.1; ENST00000497594.5; ENST00000309576.11; ENST00000652522.1; ENST00000397000.6; ENST00000652431.1; ENST00000651826.1; ENST00000438682.6; ENST00000397023.5; ENST00000397015.7; ENST00000397026.7; ENST00000644622.2; ENST00000643197.2; ENST00000287820.10; ENST00000397010.7; ENST00000652098.1; ENST00000650840.1; ENST00000651735.1; ENST00000396999.3; ENST00000477039.5
External Link RMBase: m6A_site_577280
mod ID: M6ASITE059574 Click to Show/Hide the Full List
mod site chr3:12381378-12381379:+ [5]
Sequence TTCTGAGAAGACTCAGCTCTACAATAAGCCTCATGAAGAGC
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000651826.1; ENST00000652431.1; ENST00000497594.5; ENST00000643197.2; ENST00000438682.6; ENST00000477039.5; ENST00000644622.2; ENST00000397026.7; ENST00000651735.1; ENST00000652522.1; ENST00000650840.1; ENST00000397029.8; ENST00000397023.5; ENST00000650650.1; ENST00000396999.3; ENST00000287820.10; ENST00000652098.1; ENST00000643888.2; ENST00000309576.11; ENST00000397000.6; ENST00000397012.7; ENST00000397010.7; ENST00000397015.7; ENST00000650761.1
External Link RMBase: m6A_site_577281
mod ID: M6ASITE059575 Click to Show/Hide the Full List
mod site chr3:12392628-12392629:+ [5]
Sequence TGCAGGGTTTCTTCCGGAGAACAATCAGATTGAAGCTTATC
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000397015.7; ENST00000397000.6; ENST00000651826.1; ENST00000497594.5; ENST00000397010.7; ENST00000397023.5; ENST00000287820.10; ENST00000643197.2; ENST00000652522.1; ENST00000652098.1; ENST00000650650.1; ENST00000397026.7; ENST00000396999.3; ENST00000651735.1; ENST00000652431.1; ENST00000397012.7; ENST00000644622.2; ENST00000650761.1; ENST00000477039.5; ENST00000309576.11; ENST00000643888.2; ENST00000650840.1
External Link RMBase: m6A_site_577282
mod ID: M6ASITE059576 Click to Show/Hide the Full List
mod site chr3:12405993-12405994:+ [5]
Sequence GACCTCCGGGCCCTGGCAAAACATTTGTATGACTCATACAT
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T; Huh7
Seq Type List MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000651735.1; ENST00000643197.2; ENST00000650840.1; ENST00000652431.1; ENST00000650650.1; ENST00000397010.7; ENST00000643888.2; ENST00000287820.10; ENST00000397023.5; ENST00000497594.5; ENST00000397026.7; ENST00000397015.7; ENST00000652098.1; ENST00000396999.3; ENST00000397000.6; ENST00000477039.5; ENST00000652522.1; ENST00000644622.2; ENST00000650761.1; ENST00000651826.1; ENST00000309576.11; ENST00000397012.7
External Link RMBase: m6A_site_577283
mod ID: M6ASITE059577 Click to Show/Hide the Full List
mod site chr3:12406030-12406031:+ [4]
Sequence ACATAAAGTCCTTCCCGCTGACCAAAGCAAAGGCGAGGGCG
Motif Score 2.839113095
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000651735.1; ENST00000652431.1; ENST00000397010.7; ENST00000643888.2; ENST00000650840.1; ENST00000309576.11; ENST00000497594.5; ENST00000397000.6; ENST00000651826.1; ENST00000397023.5; ENST00000652098.1; ENST00000644622.2; ENST00000477039.5; ENST00000397015.7; ENST00000652522.1; ENST00000287820.10; ENST00000397026.7; ENST00000396999.3; ENST00000650761.1; ENST00000643197.2; ENST00000397012.7; ENST00000650650.1
External Link RMBase: m6A_site_577284
mod ID: M6ASITE059578 Click to Show/Hide the Full List
mod site chr3:12406066-12406067:+ [6]
Sequence GGGCGATCTTGACAGGAAAGACAACAGACAAATCAGTTAGT
Motif Score 2.897386905
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000644622.2; ENST00000477039.5; ENST00000650761.1; ENST00000652522.1; ENST00000397015.7; ENST00000287820.10; ENST00000643888.2; ENST00000650650.1; ENST00000397010.7; ENST00000397023.5; ENST00000652098.1; ENST00000650840.1; ENST00000397026.7; ENST00000643197.2; ENST00000652431.1; ENST00000651735.1; ENST00000497594.5; ENST00000397012.7; ENST00000651826.1; ENST00000397000.6; ENST00000309576.11; ENST00000396999.3
External Link RMBase: m6A_site_577285
mod ID: M6ASITE059579 Click to Show/Hide the Full List
mod site chr3:12406073-12406074:+ [6]
Sequence CTTGACAGGAAAGACAACAGACAAATCAGTTAGTTCTCTTC
Motif Score 2.897386905
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000644622.2; ENST00000497594.5; ENST00000652431.1; ENST00000651826.1; ENST00000652522.1; ENST00000397010.7; ENST00000287820.10; ENST00000397026.7; ENST00000397000.6; ENST00000397015.7; ENST00000397023.5; ENST00000309576.11; ENST00000643888.2; ENST00000397012.7; ENST00000477039.5; ENST00000650840.1; ENST00000651735.1; ENST00000650650.1; ENST00000652098.1; ENST00000650761.1; ENST00000643197.2; ENST00000396999.3
External Link RMBase: m6A_site_577286
mod ID: M6ASITE059580 Click to Show/Hide the Full List
mod site chr3:12416762-12416763:+ [7]
Sequence GAAGATAAAATCAAGTTCAAACACATCACCCCCCTGCAGGA
Motif Score 2.20572619
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000397026.7; ENST00000650650.1; ENST00000397023.5; ENST00000652098.1; ENST00000643888.2; ENST00000643197.2; ENST00000651826.1; ENST00000397012.7; ENST00000396999.3; ENST00000397000.6; ENST00000287820.10; ENST00000309576.11; ENST00000650761.1; ENST00000652522.1; ENST00000652431.1; ENST00000651735.1; ENST00000644622.2; ENST00000397010.7; ENST00000397015.7; ENST00000650840.1
External Link RMBase: m6A_site_577287
mod ID: M6ASITE059581 Click to Show/Hide the Full List
mod site chr3:12416896-12416897:+ [8]
Sequence TCCTGGTTTTGTAAATCTTGACTTGAACGACCAAGTAACTC
Motif Score 3.28175
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000651826.1; ENST00000644622.2; ENST00000287820.10; ENST00000652098.1; ENST00000652522.1; ENST00000650761.1; ENST00000643197.2; ENST00000396999.3; ENST00000397010.7; ENST00000397026.7; ENST00000397012.7; ENST00000397023.5; ENST00000650650.1; ENST00000651735.1; ENST00000650840.1; ENST00000397015.7; ENST00000643888.2; ENST00000652431.1; ENST00000309576.11; ENST00000397000.6
External Link RMBase: m6A_site_577288
mod ID: M6ASITE059582 Click to Show/Hide the Full List
mod site chr3:12416902-12416903:+ [4]
Sequence TTTTGTAAATCTTGACTTGAACGACCAAGTAACTCTCCTCA
Motif Score 2.925321429
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000397010.7; ENST00000287820.10; ENST00000651735.1; ENST00000397015.7; ENST00000643197.2; ENST00000652522.1; ENST00000652431.1; ENST00000397012.7; ENST00000397026.7; ENST00000397023.5; ENST00000396999.3; ENST00000652098.1; ENST00000643888.2; ENST00000650650.1; ENST00000651826.1; ENST00000309576.11; ENST00000650840.1; ENST00000650761.1; ENST00000397000.6; ENST00000644622.2
External Link RMBase: m6A_site_577289
mod ID: M6ASITE059583 Click to Show/Hide the Full List
mod site chr3:12416913-12416914:+ [8]
Sequence TTGACTTGAACGACCAAGTAACTCTCCTCAAATATGGAGTC
Motif Score 2.590089286
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000396999.3; ENST00000397010.7; ENST00000287820.10; ENST00000397026.7; ENST00000397015.7; ENST00000309576.11; ENST00000650840.1; ENST00000397012.7; ENST00000652522.1; ENST00000650650.1; ENST00000644622.2; ENST00000397000.6; ENST00000643197.2; ENST00000643888.2; ENST00000652431.1; ENST00000652098.1; ENST00000397023.5; ENST00000651826.1; ENST00000651735.1; ENST00000650761.1
External Link RMBase: m6A_site_577290
mod ID: M6ASITE059584 Click to Show/Hide the Full List
mod site chr3:12416947-12416948:+ [4]
Sequence TGGAGTCCACGAGATCATTTACACAATGCTGGCCTCCTTGA
Motif Score 2.07285119
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000651826.1; ENST00000651735.1; ENST00000397015.7; ENST00000397023.5; ENST00000397012.7; ENST00000652431.1; ENST00000397010.7; ENST00000652522.1; ENST00000396999.3; ENST00000650840.1; ENST00000650650.1; ENST00000644622.2; ENST00000650761.1; ENST00000287820.10; ENST00000643888.2; ENST00000397026.7; ENST00000643197.2; ENST00000309576.11; ENST00000397000.6; ENST00000652098.1
External Link RMBase: m6A_site_577291
mod ID: M6ASITE059585 Click to Show/Hide the Full List
mod site chr3:12417012-12417013:+ [4]
Sequence CCGAGGGCCAAGGCTTCATGACAAGGGAGTTTCTAAAGAGC
Motif Score 2.859755952
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000652098.1; ENST00000643197.2; ENST00000397010.7; ENST00000652431.1; ENST00000309576.11; ENST00000397015.7; ENST00000650761.1; ENST00000643888.2; ENST00000651826.1; ENST00000397026.7; ENST00000651735.1; ENST00000644622.2; ENST00000397000.6; ENST00000650650.1; ENST00000396999.3; ENST00000650840.1; ENST00000287820.10; ENST00000397012.7; ENST00000397023.5; ENST00000652522.1
External Link RMBase: m6A_site_577292
mod ID: M6ASITE059586 Click to Show/Hide the Full List
mod site chr3:12433933-12433934:+ [3]
Sequence GAATGTGAAGCCCATTGAAGACATTCAAGACAACCTGCTAC
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; hESC-HEK293T; A549; Huh7; MM6
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000397023.5; ENST00000397012.7; ENST00000397026.7; ENST00000644622.2; ENST00000651735.1; ENST00000651826.1; ENST00000397015.7; ENST00000397000.6; ENST00000309576.11; ENST00000643197.2; ENST00000652431.1; ENST00000650761.1; ENST00000287820.10; ENST00000643888.2; ENST00000397010.7; ENST00000652098.1
External Link RMBase: m6A_site_577293
mod ID: M6ASITE059587 Click to Show/Hide the Full List
mod site chr3:12433942-12433943:+ [3]
Sequence GCCCATTGAAGACATTCAAGACAACCTGCTACAAGCCCTGG
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; Huh7; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397015.7; ENST00000651826.1; ENST00000643888.2; ENST00000397012.7; ENST00000309576.11; ENST00000650761.1; ENST00000397026.7; ENST00000397010.7; ENST00000643197.2; ENST00000652098.1; ENST00000397023.5; ENST00000287820.10; ENST00000397000.6; ENST00000644622.2; ENST00000651735.1; ENST00000652431.1
External Link RMBase: m6A_site_577294
mod ID: M6ASITE059588 Click to Show/Hide the Full List
mod site chr3:12433952-12433953:+ [5]
Sequence GACATTCAAGACAACCTGCTACAAGCCCTGGAGCTCCAGCT
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000652431.1; ENST00000397026.7; ENST00000643197.2; ENST00000309576.11; ENST00000397012.7; ENST00000644622.2; ENST00000651826.1; ENST00000650761.1; ENST00000643888.2; ENST00000287820.10; ENST00000397015.7; ENST00000397010.7; ENST00000397000.6; ENST00000651735.1; ENST00000397023.5; ENST00000652098.1
External Link RMBase: m6A_site_577295
mod ID: M6ASITE059589 Click to Show/Hide the Full List
mod site chr3:12433981-12433982:+ [3]
Sequence GGAGCTCCAGCTGAAGCTGAACCACCCTGAGTCCTCACAGC
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; MM6; Huh7; CD4T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397023.5; ENST00000397010.7; ENST00000652098.1; ENST00000397015.7; ENST00000643888.2; ENST00000651826.1; ENST00000651735.1; ENST00000397000.6; ENST00000643197.2; ENST00000652431.1; ENST00000397012.7; ENST00000397026.7; ENST00000309576.11; ENST00000287820.10; ENST00000644622.2; ENST00000650761.1
External Link RMBase: m6A_site_577296
mod ID: M6ASITE059590 Click to Show/Hide the Full List
mod site chr3:12434028-12434029:+ [4]
Sequence CCAAGCTGCTCCAGAAAATGACAGACCTCAGACAGATTGTC
Motif Score 2.859755952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000397026.7; ENST00000397012.7; ENST00000650761.1; ENST00000287820.10; ENST00000397000.6; ENST00000309576.11; ENST00000651826.1; ENST00000643888.2; ENST00000651735.1; ENST00000643197.2; ENST00000397023.5; ENST00000644622.2; ENST00000397010.7; ENST00000652431.1; ENST00000652098.1; ENST00000397015.7
External Link RMBase: m6A_site_577297
mod ID: M6ASITE059591 Click to Show/Hide the Full List
mod site chr3:12434032-12434033:+ [3]
Sequence GCTGCTCCAGAAAATGACAGACCTCAGACAGATTGTCACGG
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; MM6; Huh7; CD4T; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000397000.6; ENST00000644622.2; ENST00000650761.1; ENST00000652098.1; ENST00000287820.10; ENST00000397010.7; ENST00000652431.1; ENST00000651735.1; ENST00000643888.2; ENST00000309576.11; ENST00000651826.1; ENST00000397012.7; ENST00000397026.7; ENST00000397015.7; ENST00000643197.2; ENST00000397023.5
External Link RMBase: m6A_site_577298
mod ID: M6ASITE059592 Click to Show/Hide the Full List
mod site chr3:12434039-12434040:+ [3]
Sequence CAGAAAATGACAGACCTCAGACAGATTGTCACGGAACACGT
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; MM6; Huh7; CD4T; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000651826.1; ENST00000397026.7; ENST00000643197.2; ENST00000397023.5; ENST00000287820.10; ENST00000651735.1; ENST00000650761.1; ENST00000643888.2; ENST00000309576.11; ENST00000652431.1; ENST00000397000.6; ENST00000397010.7; ENST00000652098.1; ENST00000644622.2; ENST00000397012.7; ENST00000397015.7
External Link RMBase: m6A_site_577299
mod ID: M6ASITE059593 Click to Show/Hide the Full List
mod site chr3:12434054-12434055:+ [3]
Sequence CTCAGACAGATTGTCACGGAACACGTGCAGCTACTGCAGGT
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; MM6; Huh7; CD4T; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000652431.1; ENST00000644622.2; ENST00000287820.10; ENST00000397026.7; ENST00000397023.5; ENST00000397012.7; ENST00000643888.2; ENST00000652098.1; ENST00000309576.11; ENST00000397015.7; ENST00000651826.1; ENST00000651735.1; ENST00000650761.1; ENST00000643197.2; ENST00000397000.6; ENST00000397010.7
External Link RMBase: m6A_site_577300
mod ID: M6ASITE059594 Click to Show/Hide the Full List
mod site chr3:12434091-12434092:+ [3]
Sequence AGGTGATCAAGAAGACGGAGACAGACATGAGTCTTCACCCG
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; MM6; Huh7; HEK293A-TOA; iSLK; MSC; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000643888.2; ENST00000397012.7; ENST00000651735.1; ENST00000651826.1; ENST00000652431.1; ENST00000397015.7; ENST00000309576.11; ENST00000650761.1; ENST00000397026.7; ENST00000287820.10; ENST00000643197.2; ENST00000644622.2; ENST00000397023.5; ENST00000397000.6; ENST00000652098.1; ENST00000397010.7
External Link RMBase: m6A_site_577301
mod ID: M6ASITE059595 Click to Show/Hide the Full List
mod site chr3:12434095-12434096:+ [4]
Sequence GATCAAGAAGACGGAGACAGACATGAGTCTTCACCCGCTCC
Motif Score 2.897386905
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000287820.10; ENST00000397023.5; ENST00000643197.2; ENST00000652098.1; ENST00000397010.7; ENST00000652431.1; ENST00000309576.11; ENST00000651826.1; ENST00000651735.1; ENST00000650761.1; ENST00000397015.7; ENST00000644622.2; ENST00000397026.7; ENST00000397000.6; ENST00000397012.7; ENST00000643888.2
External Link RMBase: m6A_site_577302
mod ID: M6ASITE059596 Click to Show/Hide the Full List
mod site chr3:12434134-12434135:+ [3]
Sequence CCTGCAGGAGATCTACAAGGACTTGTACTAGCAGAGAGTCC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000397000.6; ENST00000652431.1; ENST00000397012.7; ENST00000643888.2; ENST00000651826.1; ENST00000397010.7; ENST00000650761.1; ENST00000644622.2; ENST00000652098.1; ENST00000651735.1; ENST00000397026.7; ENST00000397015.7; ENST00000397023.5; ENST00000287820.10; ENST00000309576.11; ENST00000643197.2
External Link RMBase: m6A_site_577303
mod ID: M6ASITE059597 Click to Show/Hide the Full List
mod site chr3:12434140-12434141:+ [4]
Sequence GGAGATCTACAAGGACTTGTACTAGCAGAGAGTCCTGAGCC
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000397023.5; ENST00000397012.7; ENST00000650761.1; ENST00000644622.2; ENST00000397000.6; ENST00000309576.11; ENST00000643888.2; ENST00000651735.1; ENST00000287820.10; ENST00000397010.7; ENST00000652098.1; ENST00000652431.1; ENST00000397026.7; ENST00000643197.2; ENST00000397015.7; ENST00000651826.1
External Link RMBase: m6A_site_577304
mod ID: M6ASITE059598 Click to Show/Hide the Full List
mod site chr3:12434211-12434212:+ [5]
Sequence CTATTCTGAGGGAAAATCTGACACCTAAGAAATTTACTGTG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000651735.1; ENST00000397010.7; ENST00000309576.11; ENST00000650761.1; ENST00000397015.7; ENST00000397012.7; ENST00000651826.1; ENST00000397023.5; ENST00000397026.7; ENST00000397000.6; ENST00000287820.10
External Link RMBase: m6A_site_577305
mod ID: M6ASITE059599 Click to Show/Hide the Full List
mod site chr3:12434226-12434227:+ [4]
Sequence ATCTGACACCTAAGAAATTTACTGTGAAAAAGCATTTTAAA
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000651735.1; ENST00000397010.7; ENST00000651826.1; ENST00000650761.1; ENST00000397026.7; ENST00000397015.7; ENST00000397012.7; ENST00000309576.11; ENST00000397023.5; ENST00000287820.10
External Link RMBase: m6A_site_577306
mod ID: M6ASITE059600 Click to Show/Hide the Full List
mod site chr3:12434296-12434297:+ [5]
Sequence TATGCATATTGTTTATAAAGACACATTTACAATTTACTTTT
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T; Huh7; iSLK
Seq Type List MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000651826.1; ENST00000397010.7; ENST00000309576.11; ENST00000397026.7; ENST00000651735.1; ENST00000397023.5; ENST00000650761.1; ENST00000287820.10; ENST00000397012.7; ENST00000397015.7
External Link RMBase: m6A_site_577307