General Information of the Epigenetic Target (ID: EPITAR00388)
Target Name Runt-related transcription factor 1 (RUNX1)
Synonyms
Acute myeloid leukemia 1 protein; Core-binding factor subunit alpha-2; CBF-alpha-2; Oncogene AML-1; Polyomavirus enhancer-binding protein 2 alpha B subunit; PEA2-alpha B; PEBP2-alpha B; SL3-3 enhancer factor 1 alpha B subunit; SL3/AKV core-binding factor alpha B subunit
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Gene Name RUNX1
Sequence
MRIPVDASTSRRFTPPSTALSPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRLSTAPDLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY
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Function
Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'-TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. The heterodimers bind to the core site of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers, LCK, IL3 and GM-CSF promoters (Probable). Essential for the development of normal hematopoiesis (PubMed:17431401). Acts synergistically with ELF4 to transactivate the IL-3 promoter and with ELF2 to transactivate the BLK promoter (PubMed:10207087, PubMed:14970218). Inhibits KAT6B-dependent transcriptional activation (By similarity). Involved in lineage commitment of immature T cell precursors. CBF complexes repress ZBTB7B transcription factor during cytotoxic (CD8+) T cell development. They bind to RUNX-binding sequence within the ZBTB7B locus acting as transcriptional silencer and allowing for cytotoxic T cell differentiation. CBF complexes binding to the transcriptional silencer is essential for recruitment of nuclear protein complexes that catalyze epigenetic modifications to establish epigenetic ZBTB7B silencing (By similarity). Controls the anergy and suppressive function of regulatory T-cells (Treg) by associating with FOXP3. Activates the expression of IL2 and IFNG and down-regulates the expression of TNFRSF18, IL2RA and CTLA4, in conventional T-cells (PubMed:17377532). Positively regulates the expression of RORC in T-helper 17 cells (By similarity).
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Gene ID 861
HGNC ID HGNC:10471
Ensembl Gene ID ENSG00000159216
KEGG ID hsa:861
Chromosomal Location 21q22.12
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00388)
Runt-related transcription factor 1 (RUNX1)
Adenosine-to-Inosine editing (A-to-I)
In total 11 m6A sequence/site(s) in this target gene
mod ID: A2ISITE010881 Click to Show/Hide the Full List
mod site chr21:34791566-34791567:- [1]
Sequence TTATATACGTTTATATAAATATATATAAATTGAGCTTGCTT
Transcript ID List ENST00000300305.7; ENST00000344691.8; ENST00000437180.5
External Link RMBase: RNA-editing_site_89548
mod ID: A2ISITE010882 Click to Show/Hide the Full List
mod site chr21:34794776-34794777:- [2]
Sequence CTCCACCCCAGCAAATCATGATCTGGCCCAAAATGTCAACA
Transcript ID List ENST00000300305.7; ENST00000344691.8; ENST00000482318.5; ENST00000437180.5; ENST00000399240.5; rmsk_5217061
External Link RMBase: RNA-editing_site_89549
mod ID: A2ISITE010883 Click to Show/Hide the Full List
mod site chr21:34794783-34794784:- [1]
Sequence CAGCCCCCTCCACCCCAGCAAATCATGATCTGGCCCAAAAT
Transcript ID List ENST00000344691.8; ENST00000399240.5; ENST00000300305.7; ENST00000437180.5; rmsk_5217061; ENST00000482318.5
External Link RMBase: RNA-editing_site_89550
mod ID: A2ISITE010884 Click to Show/Hide the Full List
mod site chr21:34794816-34794817:- [2]
Sequence GAGATGCTGCCACACATCCTACGATGAACGAGACAGCCCCC
Transcript ID List ENST00000344691.8; ENST00000399240.5; ENST00000482318.5; ENST00000300305.7; rmsk_5217061; ENST00000437180.5
External Link RMBase: RNA-editing_site_89551
mod ID: A2ISITE010885 Click to Show/Hide the Full List
mod site chr21:34794856-34794857:- [1]
Sequence GAGGGGCGGGCGATGCTACTAACACCTAATGGGTAAAGCAG
Transcript ID List ENST00000344691.8; ENST00000399240.5; ENST00000437180.5; ENST00000482318.5; ENST00000300305.7; rmsk_5217061
External Link RMBase: RNA-editing_site_89552
mod ID: A2ISITE010886 Click to Show/Hide the Full List
mod site chr21:34797934-34797935:- [2]
Sequence CTGAGCATCGGAGAATATTTAGCAGCATCCTTGGCCTCTAG
Transcript ID List ENST00000482318.5; ENST00000300305.7; ENST00000437180.5; ENST00000344691.8; ENST00000399240.5
External Link RMBase: RNA-editing_site_89553
mod ID: A2ISITE010887 Click to Show/Hide the Full List
mod site chr21:34797938-34797939:- [2]
Sequence TGTCCTGAGCATCGGAGAATATTTAGCAGCATCCTTGGCCT
Transcript ID List ENST00000344691.8; ENST00000300305.7; ENST00000482318.5; ENST00000437180.5; ENST00000399240.5
External Link RMBase: RNA-editing_site_89554
mod ID: A2ISITE010888 Click to Show/Hide the Full List
mod site chr21:34797999-34798000:- [2]
Sequence AGCTTCACAACGGCAGTACTATTGACATTTGGGGCCAAATA
Transcript ID List ENST00000482318.5; ENST00000437180.5; ENST00000344691.8; ENST00000399240.5; ENST00000300305.7
External Link RMBase: RNA-editing_site_89555
mod ID: A2ISITE010889 Click to Show/Hide the Full List
mod site chr21:34798010-34798011:- [2]
Sequence TGCCTTCTAAGAGCTTCACAACGGCAGTACTATTGACATTT
Transcript ID List ENST00000300305.7; ENST00000344691.8; ENST00000437180.5; ENST00000482318.5; ENST00000399240.5
External Link RMBase: RNA-editing_site_89556
mod ID: A2ISITE010890 Click to Show/Hide the Full List
mod site chr21:34872863-34872864:- [1]
Sequence TGATTTGACTCCCAGAAGACATTTGGCAATATCTGCAGACA
Transcript ID List rmsk_5217161; ENST00000399240.5; ENST00000482318.5; ENST00000344691.8; ENST00000399237.6; ENST00000437180.5; ENST00000358356.9; ENST00000300305.7
External Link RMBase: RNA-editing_site_89557
mod ID: A2ISITE010891 Click to Show/Hide the Full List
mod site chr21:34924786-34924787:- [2]
Sequence CTCCAGAACTATAAGAAATAAATGTTTGTAGTTTAAGCCAC
Transcript ID List ENST00000482318.5; ENST00000300305.7; rmsk_5217226; ENST00000437180.5; ENST00000455571.5; ENST00000475045.6; ENST00000416754.1
External Link RMBase: RNA-editing_site_89558
5-methylcytidine (m5C)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE002818 Click to Show/Hide the Full List
mod site chr21:34887058-34887059:-
Sequence CGCTTCACGCCGCCTTCCACCGCGCTGAGCCCAGGCAAGAT
Cell/Tissue List spleen
Seq Type List Bisulfite-seq
Transcript ID List ENST00000399237.6; ENST00000358356.9; ENST00000455571.5; ENST00000482318.5; ENST00000399240.5; ENST00000437180.5; ENST00000475045.6; ENST00000300305.7; ENST00000344691.8
External Link RMBase: m5C_site_29959
N6-methyladenosine (m6A)
In total 55 m6A sequence/site(s) in this target gene
mod ID: M6ASITE055365 Click to Show/Hide the Full List
mod site chr21:34787920-34787921:- [3]
Sequence AGCCTGAGCAGGGCAGCTGGACTGCTGCTGTTCAGGAGCCA
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000344691.8; ENST00000437180.5; ENST00000300305.7
External Link RMBase: m6A_site_546599
mod ID: M6ASITE055366 Click to Show/Hide the Full List
mod site chr21:34788783-34788784:- [4]
Sequence AAAACATATTTTACATCTGAACAAAATGCCTTTTTGTTTAC
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T; AML
Seq Type List MAZTER-seq; miCLIP
Transcript ID List ENST00000344691.8; ENST00000437180.5; ENST00000300305.7
External Link RMBase: m6A_site_546600
mod ID: M6ASITE055367 Click to Show/Hide the Full List
mod site chr21:34789214-34789215:- [5]
Sequence ACCCAGTACCAAATTTCAGAACACAAGAAGGTCCAGTTCTT
Motif Score 2.951386905
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000344691.8; ENST00000300305.7; ENST00000437180.5
External Link RMBase: m6A_site_546601
mod ID: M6ASITE055368 Click to Show/Hide the Full List
mod site chr21:34789293-34789294:- [6]
Sequence TCTCTTCCTCTATCTTCCAAACCCCACTTTCTCCCTCCTCC
Motif Score 2.185083333
Cell/Tissue List A549; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000437180.5; ENST00000344691.8; ENST00000300305.7
External Link RMBase: m6A_site_546602
mod ID: M6ASITE055369 Click to Show/Hide the Full List
mod site chr21:34790837-34790838:- [7]
Sequence GGAGCCACATTTACATAGGAACCAAATCAATGAATTTAGGG
Motif Score 2.930744048
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000437180.5; ENST00000300305.7; ENST00000344691.8
External Link RMBase: m6A_site_546603
mod ID: M6ASITE055370 Click to Show/Hide the Full List
mod site chr21:34790867-34790868:- [7]
Sequence ACAGAACACAGCCAAAGTAAACTGTGTAGGGGAGCCACATT
Motif Score 2.627720238
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000437180.5; ENST00000300305.7; ENST00000344691.8
External Link RMBase: m6A_site_546604
mod ID: M6ASITE055371 Click to Show/Hide the Full List
mod site chr21:34790882-34790883:- [7]
Sequence CACAGATGCTGTGTAACAGAACACAGCCAAAGTAAACTGTG
Motif Score 2.951386905
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000437180.5; ENST00000344691.8; ENST00000300305.7
External Link RMBase: m6A_site_546605
mod ID: M6ASITE055372 Click to Show/Hide the Full List
mod site chr21:34791813-34791814:- [3]
Sequence AGGAAGATTCCCGGAGGGAAACTGTGAATGCTTCTGATTTA
Motif Score 2.627720238
Cell/Tissue List HeLa; A549; U2OS; fibroblasts; CD8T; MM6; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000482318.5; ENST00000300305.7; ENST00000399240.5; ENST00000344691.8; ENST00000437180.5
External Link RMBase: m6A_site_546606
mod ID: M6ASITE055373 Click to Show/Hide the Full List
mod site chr21:34791835-34791836:- [3]
Sequence GGGGACGCGCTGGAAAGCAAACAGGAAGATTCCCGGAGGGA
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; A549; U2OS; fibroblasts; MM6; Jurkat; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000344691.8; ENST00000482318.5; ENST00000399240.5; ENST00000437180.5; ENST00000300305.7
External Link RMBase: m6A_site_546607
mod ID: M6ASITE055374 Click to Show/Hide the Full List
mod site chr21:34792234-34792235:- [3]
Sequence GCTCAACCCCAGCCTCCCGAACCAGAGCGACGTGGTGGAGG
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34; HepG2; MT4; MM6; Jurkat; CD4T; peripheral-blood; MSC; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000344691.8; ENST00000437180.5; ENST00000399240.5; ENST00000482318.5; ENST00000300305.7
External Link RMBase: m6A_site_546608
mod ID: M6ASITE055375 Click to Show/Hide the Full List
mod site chr21:34799319-34799320:- [3]
Sequence ATGACAACCCTCTCTGCAGAACTTTCCAGTCGACTCTCAAG
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; MT4; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000482318.5; ENST00000300305.7; ENST00000399240.5; ENST00000344691.8; ENST00000437180.5
External Link RMBase: m6A_site_546609
mod ID: M6ASITE055376 Click to Show/Hide the Full List
mod site chr21:34821689-34821690:- [8]
Sequence CATGGCTCCCTCAGAGGAAGACACAGCACCCTGGAGATGTT
Motif Score 2.897386905
Cell/Tissue List CD34
Seq Type List m6A-seq
Transcript ID List ENST00000300305.7; ENST00000344691.8; ENST00000399240.5; ENST00000358356.9; ENST00000479325.1; ENST00000437180.5; ENST00000482318.5
External Link RMBase: m6A_site_546610
mod ID: M6ASITE055377 Click to Show/Hide the Full List
mod site chr21:34834321-34834322:- [7]
Sequence ATGTGCACACACCTTCCCAGACCAACTGGGGTTTCCCCTTG
Motif Score 2.876744048
Cell/Tissue List MT4; Jurkat
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000469087.1; ENST00000300305.7; ENST00000399240.5; ENST00000437180.5; ENST00000482318.5; ENST00000358356.9; ENST00000344691.8
External Link RMBase: m6A_site_546611
mod ID: M6ASITE055378 Click to Show/Hide the Full List
mod site chr21:34834435-34834436:- [9]
Sequence GAACCACTCCACTGCCTTTAACCCTCAGCCTCAGAGTCAGA
Motif Score 2.147452381
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000437180.5; ENST00000344691.8; ENST00000399240.5; ENST00000300305.7; ENST00000482318.5; ENST00000399237.6; ENST00000358356.9; ENST00000469087.1
External Link RMBase: m6A_site_546612
mod ID: M6ASITE055379 Click to Show/Hide the Full List
mod site chr21:34834453-34834454:- [3]
Sequence CAACCCTCGTGCCTCCCTGAACCACTCCACTGCCTTTAACC
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; MT4; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000437180.5; ENST00000358356.9; ENST00000399237.6; ENST00000469087.1; ENST00000399240.5; ENST00000344691.8; ENST00000482318.5; ENST00000300305.7
External Link RMBase: m6A_site_546613
mod ID: M6ASITE055380 Click to Show/Hide the Full List
mod site chr21:34834533-34834534:- [3]
Sequence TTTTCCGAGCGGCTCAGTGAACTGGAGCAGCTGCGGCGCAC
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; MT4; MM6; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000399237.6; ENST00000482318.5; ENST00000469087.1; ENST00000300305.7; ENST00000358356.9; ENST00000344691.8; ENST00000437180.5; ENST00000399240.5
External Link RMBase: m6A_site_546614
mod ID: M6ASITE055381 Click to Show/Hide the Full List
mod site chr21:34834574-34834575:- [3]
Sequence GGCAGAAACTAGATGATCAGACCAAGCCCGGGAGCTTGTCC
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; MT4; MM6; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000399240.5; ENST00000399237.6; ENST00000300305.7; ENST00000437180.5; ENST00000358356.9; ENST00000344691.8; ENST00000482318.5; ENST00000469087.1
External Link RMBase: m6A_site_546615
mod ID: M6ASITE055382 Click to Show/Hide the Full List
mod site chr21:34834587-34834588:- [3]
Sequence ACAATAGGACATCGGCAGAAACTAGATGATCAGACCAAGCC
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; MT4; MM6; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000469087.1; ENST00000437180.5; ENST00000300305.7; ENST00000358356.9; ENST00000399237.6; ENST00000399240.5; ENST00000344691.8; ENST00000482318.5
External Link RMBase: m6A_site_546616
mod ID: M6ASITE055383 Click to Show/Hide the Full List
mod site chr21:34856360-34856361:- [8]
Sequence ATATTTGGCTCATCTCGAAGACTGTCTATTATAGAAGGGCA
Motif Score 3.319380952
Cell/Tissue List CD34; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000399240.5; ENST00000469087.1; ENST00000482318.5; ENST00000300305.7; ENST00000467577.1; ENST00000399237.6; ENST00000344691.8; ENST00000358356.9; ENST00000437180.5
External Link RMBase: m6A_site_546617
mod ID: M6ASITE055384 Click to Show/Hide the Full List
mod site chr21:34859480-34859481:- [8]
Sequence ACAGTGGATGGGCCCCGAGAACCTCGAAGTAAGTGCATCCA
Motif Score 2.930744048
Cell/Tissue List CD34; MT4; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000482318.5; ENST00000358356.9; ENST00000399237.6; ENST00000300305.7; ENST00000399240.5; ENST00000344691.8; ENST00000437180.5; ENST00000467577.1
External Link RMBase: m6A_site_546618
mod ID: M6ASITE055385 Click to Show/Hide the Full List
mod site chr21:34859541-34859542:- [8]
Sequence GACCATCACTGTCTTCACAAACCCACCGCAAGTCGCCACCT
Motif Score 2.185083333
Cell/Tissue List CD34; MT4; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000482318.5; ENST00000358356.9; ENST00000467577.1; ENST00000399240.5; ENST00000344691.8; ENST00000437180.5; ENST00000300305.7; ENST00000399237.6
External Link RMBase: m6A_site_546619
mod ID: M6ASITE055386 Click to Show/Hide the Full List
mod site chr21:34865068-34865069:- [9]
Sequence CAATGCTACGAGATGGAATGACTGTTATTAACCCCCTTTTA
Motif Score 3.28175
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000437180.5; ENST00000399237.6; ENST00000300305.7; ENST00000399240.5; ENST00000358356.9; ENST00000344691.8; ENST00000482318.5
External Link RMBase: m6A_site_546620
mod ID: M6ASITE055387 Click to Show/Hide the Full List
mod site chr21:34880606-34880607:- [3]
Sequence TGCTACCGCAGCCATGAAGAACCAGGTTGCAAGATTTAATG
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34; MT4; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000437180.5; ENST00000300305.7; ENST00000358356.9; ENST00000482318.5; ENST00000344691.8; ENST00000455571.5; ENST00000399237.6; ENST00000399240.5
External Link RMBase: m6A_site_546621
mod ID: M6ASITE055388 Click to Show/Hide the Full List
mod site chr21:34880648-34880649:- [3]
Sequence GATGGCTGGCAATGATGAAAACTACTCGGCTGAGCTGAGAA
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34
Seq Type List m6A-seq
Transcript ID List ENST00000344691.8; ENST00000482318.5; ENST00000399237.6; ENST00000437180.5; ENST00000358356.9; ENST00000300305.7; ENST00000399240.5; ENST00000455571.5
External Link RMBase: m6A_site_546622
mod ID: M6ASITE055389 Click to Show/Hide the Full List
mod site chr21:34886862-34886863:- [3]
Sequence CGCACTGGCGCTGCAACAAGACCCTGCCCATCGCTTTCAAG
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HEC-1-A
Seq Type List m6A-seq
Transcript ID List ENST00000358356.9; ENST00000437180.5; ENST00000399240.5; ENST00000399237.6; ENST00000482318.5; ENST00000344691.8; ENST00000300305.7; ENST00000455571.5
External Link RMBase: m6A_site_546623
mod ID: M6ASITE055390 Click to Show/Hide the Full List
mod site chr21:34887292-34887293:- [3]
Sequence AGAACGTTTTCCCCTCCTGGACTGTTAGTAACTTAGTCTCC
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; fibroblasts; GM12878; MT4; H1299; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000358356.9; ENST00000455571.5; ENST00000300305.7; ENST00000482318.5; ENST00000399237.6; ENST00000475045.6; ENST00000344691.8; ENST00000437180.5
External Link RMBase: m6A_site_546624
mod ID: M6ASITE055391 Click to Show/Hide the Full List
mod site chr21:34887315-34887316:- [3]
Sequence GTCAGAGGCCGATCCGCAGAACCAGAACGTTTTCCCCTCCT
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; fibroblasts; GM12878; MT4; H1299; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000455571.5; ENST00000358356.9; ENST00000344691.8; ENST00000475045.6; ENST00000300305.7; ENST00000399237.6; ENST00000437180.5; ENST00000482318.5
External Link RMBase: m6A_site_546625
mod ID: M6ASITE055392 Click to Show/Hide the Full List
mod site chr21:34887420-34887421:- [3]
Sequence TTCTAACAGCCAAAGACAGAACTTAACCTCTGCAAGCAAGA
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; fibroblasts; GM12878; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000344691.8; ENST00000482318.5; ENST00000300305.7; ENST00000475045.6; ENST00000399237.6; ENST00000358356.9; ENST00000437180.5; ENST00000455571.5
External Link RMBase: m6A_site_546626
mod ID: M6ASITE055393 Click to Show/Hide the Full List
mod site chr21:34887425-34887426:- [3]
Sequence AACTTTTCTAACAGCCAAAGACAGAACTTAACCTCTGCAAG
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; fibroblasts; GM12878; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000358356.9; ENST00000455571.5; ENST00000300305.7; ENST00000399237.6; ENST00000344691.8; ENST00000475045.6; ENST00000482318.5; ENST00000437180.5
External Link RMBase: m6A_site_546627
mod ID: M6ASITE055394 Click to Show/Hide the Full List
mod site chr21:34887444-34887445:- [3]
Sequence TGAGAATTTTGCCTTCAGGAACTTTTCTAACAGCCAAAGAC
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; fibroblasts; GM12878; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000399237.6; ENST00000475045.6; ENST00000437180.5; ENST00000482318.5; ENST00000455571.5; ENST00000300305.7; ENST00000344691.8; ENST00000358356.9
External Link RMBase: m6A_site_546628
mod ID: M6ASITE055395 Click to Show/Hide the Full List
mod site chr21:34887525-34887526:- [3]
Sequence GACAGGCATTAACTACTGGAACTTCCAAATAATGTGTTTGC
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; U2OS; fibroblasts; A549; GM12878; LCLs; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000300305.7; ENST00000437180.5; ENST00000358356.9; ENST00000482318.5; ENST00000344691.8; ENST00000475045.6; ENST00000399237.6; ENST00000455571.5
External Link RMBase: m6A_site_546629
mod ID: M6ASITE055396 Click to Show/Hide the Full List
mod site chr21:34887548-34887549:- [3]
Sequence ACAAAACTCACCTGCAAAAAACTGACAGGCATTAACTACTG
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; U2OS; fibroblasts; A549; GM12878; CD8T; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000344691.8; ENST00000358356.9; ENST00000475045.6; ENST00000399237.6; ENST00000300305.7; ENST00000455571.5; ENST00000482318.5; ENST00000437180.5
External Link RMBase: m6A_site_546630
mod ID: M6ASITE055397 Click to Show/Hide the Full List
mod site chr21:34887563-34887564:- [3]
Sequence CTGTTGGGACTTTAGACAAAACTCACCTGCAAAAAACTGAC
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; U2OS; fibroblasts; A549; GM12878; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000344691.8; ENST00000300305.7; ENST00000475045.6; ENST00000358356.9; ENST00000437180.5; ENST00000482318.5; ENST00000399237.6; ENST00000455571.5
External Link RMBase: m6A_site_546631
mod ID: M6ASITE055398 Click to Show/Hide the Full List
mod site chr21:34887568-34887569:- [3]
Sequence GTGTTCTGTTGGGACTTTAGACAAAACTCACCTGCAAAAAA
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; U2OS; fibroblasts; A549; GM12878; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000482318.5; ENST00000399237.6; ENST00000344691.8; ENST00000358356.9; ENST00000437180.5; ENST00000455571.5; ENST00000300305.7; ENST00000475045.6
External Link RMBase: m6A_site_546632
mod ID: M6ASITE055399 Click to Show/Hide the Full List
mod site chr21:34887575-34887576:- [3]
Sequence GATAATTGTGTTCTGTTGGGACTTTAGACAAAACTCACCTG
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; U2OS; fibroblasts; A549; GM12878; CD8T; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000437180.5; ENST00000344691.8; ENST00000300305.7; ENST00000475045.6; ENST00000358356.9; ENST00000482318.5; ENST00000455571.5; ENST00000399237.6
External Link RMBase: m6A_site_546633
mod ID: M6ASITE055400 Click to Show/Hide the Full List
mod site chr21:34887638-34887639:- [3]
Sequence CTCAGCTCTTGCTTTTCGGGACTGAAGCCAGTTTTGCATGA
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; U2OS; fibroblasts; A549; GM12878; CD8T; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000475045.6; ENST00000437180.5; ENST00000300305.7; ENST00000358356.9; ENST00000344691.8; ENST00000455571.5; ENST00000482318.5; ENST00000399237.6
External Link RMBase: m6A_site_546634
mod ID: M6ASITE055401 Click to Show/Hide the Full List
mod site chr21:34887863-34887864:- [3]
Sequence ATTCATTGAGAGAACAGAGAACATGACAAGTACTTCTAGCT
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; HepG2; fibroblasts; A549; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000399237.6; ENST00000300305.7; ENST00000475045.6; ENST00000482318.5; ENST00000437180.5; ENST00000455571.5; ENST00000344691.8; ENST00000358356.9
External Link RMBase: m6A_site_546635
mod ID: M6ASITE055402 Click to Show/Hide the Full List
mod site chr21:34887870-34887871:- [3]
Sequence TGACAGAATTCATTGAGAGAACAGAGAACATGACAAGTACT
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; fibroblasts; A549; CD8T; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000437180.5; ENST00000399237.6; ENST00000455571.5; ENST00000344691.8; ENST00000300305.7; ENST00000482318.5; ENST00000358356.9; ENST00000475045.6
External Link RMBase: m6A_site_546636
mod ID: M6ASITE055403 Click to Show/Hide the Full List
mod site chr21:34887983-34887984:- [3]
Sequence AGATGTGGGAGAGCTGTAGAACCCTGAGTGTCATCGACTGG
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; U2OS; A549; MT4; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000455571.5; ENST00000475045.6; ENST00000482318.5; ENST00000358356.9; ENST00000399237.6; ENST00000344691.8; ENST00000300305.7; ENST00000437180.5
External Link RMBase: m6A_site_546637
mod ID: M6ASITE055404 Click to Show/Hide the Full List
mod site chr21:34888015-34888016:- [3]
Sequence AACTTAACCAACATCCCCAAACCCGAGTTCACAGATGTGGG
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HEK293T; A549; U2OS; MT4; MM6; peripheral-blood; HEK293A-TOA; iSLK; MSC; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000455571.5; ENST00000344691.8; ENST00000475045.6; ENST00000300305.7; ENST00000358356.9; ENST00000482318.5; ENST00000399237.6; ENST00000437180.5
External Link RMBase: m6A_site_546638
mod ID: M6ASITE055405 Click to Show/Hide the Full List
mod site chr21:34888034-34888035:- [3]
Sequence AACCAGAGGACCAGCCACAAACTTAACCAACATCCCCAAAC
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HEK293T; A549; HepG2; U2OS; MT4; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TREX; HEC-1-A; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000437180.5; ENST00000455571.5; ENST00000358356.9; ENST00000482318.5; ENST00000399237.6; ENST00000300305.7; ENST00000344691.8; ENST00000475045.6
External Link RMBase: m6A_site_546639
mod ID: M6ASITE055406 Click to Show/Hide the Full List
mod site chr21:34888045-34888046:- [3]
Sequence AACTCCCAACAAACCAGAGGACCAGCCACAAACTTAACCAA
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; A549; HepG2; U2OS; MT4; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000475045.6; ENST00000482318.5; ENST00000358356.9; ENST00000344691.8; ENST00000455571.5; ENST00000300305.7; ENST00000437180.5; ENST00000399237.6
External Link RMBase: m6A_site_546640
mod ID: M6ASITE055407 Click to Show/Hide the Full List
mod site chr21:34888053-34888054:- [3]
Sequence GGCTGCTCAACTCCCAACAAACCAGAGGACCAGCCACAAAC
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; A549; HepG2; U2OS; HEK293T; MT4; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000358356.9; ENST00000437180.5; ENST00000482318.5; ENST00000475045.6; ENST00000455571.5; ENST00000300305.7; ENST00000344691.8; ENST00000399237.6
External Link RMBase: m6A_site_546641
mod ID: M6ASITE055408 Click to Show/Hide the Full List
mod site chr21:34888064-34888065:- [10]
Sequence TGTGACTCTGCGGCTGCTCAACTCCCAACAAACCAGAGGAC
Motif Score 2.595904762
Cell/Tissue List CD8T
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000482318.5; ENST00000300305.7; ENST00000475045.6; ENST00000399237.6; ENST00000437180.5; ENST00000455571.5; ENST00000344691.8; ENST00000358356.9
External Link RMBase: m6A_site_546642
mod ID: M6ASITE055409 Click to Show/Hide the Full List
mod site chr21:34888122-34888123:- [3]
Sequence GAGTCACCCAGCTGATGTAGACAGTGGCTGCCTTCCGAAGA
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; MT4; MM6; Huh7; peripheral-blood; HEK293A-TOA; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000358356.9; ENST00000475045.6; ENST00000455571.5; ENST00000437180.5; ENST00000482318.5; ENST00000399237.6; ENST00000344691.8; ENST00000300305.7
External Link RMBase: m6A_site_546643
mod ID: M6ASITE055410 Click to Show/Hide the Full List
mod site chr21:34888431-34888432:- [3]
Sequence AACTTCTTTCCTGGCTGCGAACTTTTCCCCAATTGTTTTCC
Motif Score 3.373380952
Cell/Tissue List HeLa; Jurkat; peripheral-blood; AML
Seq Type List m6A-seq; miCLIP
Transcript ID List ENST00000482318.5; ENST00000437180.5; ENST00000358356.9; ENST00000344691.8; ENST00000300305.7; ENST00000399237.6; ENST00000455571.5; ENST00000475045.6
External Link RMBase: m6A_site_546644
mod ID: M6ASITE055411 Click to Show/Hide the Full List
mod site chr21:34888531-34888532:- [3]
Sequence TTCTCCTTGGCCTGCGTTGGACCTTCCTTTTTTTGTTGTTT
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; A549; U2OS; MM6; Jurkat; HEK293A-TOA; iSLK; MSC; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000437180.5; ENST00000344691.8; ENST00000482318.5; ENST00000455571.5; ENST00000300305.7; ENST00000358356.9; ENST00000399237.6; ENST00000475045.6
External Link RMBase: m6A_site_546645
mod ID: M6ASITE055412 Click to Show/Hide the Full List
mod site chr21:34888645-34888646:- [3]
Sequence GACGGGCGCCCCGCGGCCGGACCCAGCCAGGGCACCACGCT
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; Jurkat; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000437180.5; ENST00000399237.6; ENST00000344691.8; ENST00000455571.5; ENST00000358356.9; ENST00000475045.6; ENST00000482318.5; ENST00000300305.7
External Link RMBase: m6A_site_546646
mod ID: M6ASITE055413 Click to Show/Hide the Full List
mod site chr21:34889716-34889717:- [11]
Sequence ATGCCCGCAGCACCGCGGGGACCGGCGCAGGGGGAAGCGGC
Motif Score 3.622404762
Cell/Tissue List HepG2; U2OS; Jurkat; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000300305.7; ENST00000437180.5; ENST00000475045.6; ENST00000455571.5; ENST00000482318.5; ENST00000399237.6
External Link RMBase: m6A_site_546647
mod ID: M6ASITE055414 Click to Show/Hide the Full List
mod site chr21:34967898-34967899:- [9]
Sequence TACATTAAGGAGGCTGCAAAACTGGTTTCAATCTGACGTGG
Motif Score 2.627720238
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000416754.1; ENST00000300305.7; ENST00000437180.5; ENST00000475045.6; ENST00000455571.5; ENST00000482318.5
External Link RMBase: m6A_site_546648
mod ID: M6ASITE055415 Click to Show/Hide the Full List
mod site chr21:35048888-35048889:- [12]
Sequence GGAGGAAGCGATGGCTTCAGACAGCATATTTGAGTCATTTC
Motif Score 2.897386905
Cell/Tissue List Jurkat; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000482318.5; ENST00000475045.6; ENST00000300305.7; ENST00000455571.5; ENST00000437180.5; ENST00000416754.1
External Link RMBase: m6A_site_546649
mod ID: M6ASITE055416 Click to Show/Hide the Full List
mod site chr21:35048988-35048989:- [12]
Sequence GCTAGAGGGGTGAGGCTGAAACAGTGACCTGTCTTGGTTTT
Motif Score 2.20572619
Cell/Tissue List Jurkat
Seq Type List m6A-seq
Transcript ID List ENST00000475045.6; ENST00000482318.5; ENST00000416754.1; ENST00000437180.5; ENST00000455571.5; ENST00000300305.7
External Link RMBase: m6A_site_546650
mod ID: M6ASITE055417 Click to Show/Hide the Full List
mod site chr21:35049187-35049188:- [13]
Sequence ACGAATCACACTGAATGCAAACCACAGGGTTTCGCAGCGTG
Motif Score 2.185083333
Cell/Tissue List NB4
Seq Type List m6A-seq
Transcript ID List ENST00000475045.6; ENST00000300305.7; ENST00000455571.5; ENST00000437180.5; ENST00000482318.5; ENST00000416754.1
External Link RMBase: m6A_site_546651
mod ID: M6ASITE055418 Click to Show/Hide the Full List
mod site chr21:35049233-35049234:- [13]
Sequence TGGCAGTGTCAGAAGTCTGAACCCAGCATAGTGGTCAGCAG
Motif Score 2.930744048
Cell/Tissue List NB4
Seq Type List m6A-seq
Transcript ID List ENST00000475045.6; ENST00000416754.1; ENST00000482318.5; ENST00000300305.7; ENST00000437180.5; ENST00000455571.5
External Link RMBase: m6A_site_546652
mod ID: M6ASITE055419 Click to Show/Hide the Full List
mod site chr21:35599969-35599970:- [14]
Sequence CATGTGCAGCTTTCTGTTCAACTTGAACAATGATTTTGTGG
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000475045.6; ENST00000431167.1
External Link RMBase: m6A_site_546653