Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00378)
Target Name Solute carrier family 2 member 1 (SLC2A1)
Synonyms
DYT18; DYT9; GLUT-1; GLUT1; GLUT; HTLVR; CSE; human T-cell leukemia virus (I and II) receptor; choreoathetosis/spasticity, episodic (paroxysmal choreoathetosis/spasticity); solute carrier family 2 (facilitated glucose transporter), member 1
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Gene Name SLC2A1
Sequence
MEPSSKKLTGRLMLAVGGAVLGSLQFGYNTGVINAPQKVIEEFYNQTWVHRYGESILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTHDLQEMKEESRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPETKGRTFDEIASGFRQGGASQSDKTPEELFHPLGADSQV
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Family Major facilitator superfamily, Sugar transporter (TC 2.A.1.1) family, Glucose transporter subfamily
Function
Facilitative glucose transporter, which is responsible for constitutive or basal glucose uptake (PubMed:18245775, PubMed:19449892, PubMed:25982116, PubMed:27078104, PubMed:10227690). Has a very broad substrate specificity; can transport a wide range of aldoses including both pentoses and hexoses (PubMed:18245775, PubMed:19449892). Most important energy carrier of the brain: present at the blood-brain barrier and assures the energy-independent, facilitative transport of glucose into the brain (PubMed:10227690). In association with BSG and NXNL1, promotes retinal cone survival by increasing glucose uptake into photoreceptors (By similarity). Required for mesendoderm differentiation (By similarity).
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Gene ID 6513
HGNC ID HGNC:11005
Ensembl Gene ID ENSG00000117394
KEGG ID hsa:6513
Chromosomal Location 1p34.2
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00378)
Solute carrier family 2 member 1 (SLC2A1)
N4-acetylcytidine (ac4C)
In total 1 m6A sequence/site(s) in this target gene
mod ID: AC4SITE000217 Click to Show/Hide the Full List
mod site chr1:42929735-42929736:- [1]
Sequence CTGACGTGACCCATGACCTGCAGGAGATGAAGGAAGAGAGT
Cell/Tissue List H1
Seq Type List ac4C-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8; ENST00000475162.3
External Link RMBase: ac4C_site_75
5-methylcytidine (m5C)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE001838 Click to Show/Hide the Full List
mod site chr1:42931121-42931122:- [2]
Sequence CGCTCACCACGCTCTGGTCCCTCTCAGTGGCCATCTTTTCT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000415851.6; ENST00000372500.4; ENST00000625233.2; ENST00000475162.3; ENST00000426263.8; ENST00000630287.2
External Link RMBase: m5C_site_2323
N6-methyladenosine (m6A)
In total 53 m6A sequence/site(s) in this target gene
mod ID: M6ASITE021309 Click to Show/Hide the Full List
mod site chr1:42925688-42925689:- [3]
Sequence TCCCCACACACACAAAATGAACCACGTTCTTTGTATGGGCC
Motif Score 2.930744048
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000426263.8
External Link RMBase: m6A_site_26292
mod ID: M6ASITE021315 Click to Show/Hide the Full List
mod site chr1:42926155-42926156:- [4]
Sequence TAAATGGCTGGTTTTTAGAAACATGGTTTTGAAATGCTTGT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26293
mod ID: M6ASITE021326 Click to Show/Hide the Full List
mod site chr1:42926192-42926193:- [5]
Sequence TACACCACCTCACTCCTGTTACTTACCTAAACAGATATAAA
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26294
mod ID: M6ASITE021337 Click to Show/Hide the Full List
mod site chr1:42926229-42926230:- [5]
Sequence CTAAGTTATAGTATATCTGGACAAGCCAACTTGTAAATACA
Motif Score 3.643047619
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26295
mod ID: M6ASITE021348 Click to Show/Hide the Full List
mod site chr1:42926252-42926253:- [5]
Sequence GTTGTCAATATTAAATACAGACACTAAGTTATAGTATATCT
Motif Score 2.897386905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26296
mod ID: M6ASITE021359 Click to Show/Hide the Full List
mod site chr1:42926256-42926257:- [5]
Sequence TTTGGTTGTCAATATTAAATACAGACACTAAGTTATAGTAT
Motif Score 2.110482143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26297
mod ID: M6ASITE021370 Click to Show/Hide the Full List
mod site chr1:42926320-42926321:- [4]
Sequence CTGCTCAAGAAGACATGGAGACTCCTGCCCTGTTGTGTATA
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26298
mod ID: M6ASITE021378 Click to Show/Hide the Full List
mod site chr1:42926328-42926329:- [4]
Sequence CAAACTCACTGCTCAAGAAGACATGGAGACTCCTGCCCTGT
Motif Score 2.897386905
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26299
mod ID: M6ASITE021379 Click to Show/Hide the Full List
mod site chr1:42926345-42926346:- [4]
Sequence GGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACAT
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26300
mod ID: M6ASITE021380 Click to Show/Hide the Full List
mod site chr1:42926377-42926378:- [5]
Sequence GCACTGAGGGCCACACTATTACCATGAGAAGAGGGCCTGTG
Motif Score 2.052208333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26301
mod ID: M6ASITE021381 Click to Show/Hide the Full List
mod site chr1:42926383-42926384:- [5]
Sequence TCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAGGG
Motif Score 2.506922619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26302
mod ID: M6ASITE021382 Click to Show/Hide the Full List
mod site chr1:42926385-42926386:- [6]
Sequence TCTCCTTTGCACTGAGGGCCACACTATTACCATGAGAAGAG
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26303
mod ID: M6ASITE021383 Click to Show/Hide the Full List
mod site chr1:42926471-42926472:- [4]
Sequence TTAATCTTTCTTTACCTGAGACCAGTTGGGAGCACTGGAGT
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; fibroblasts; GM12878; LCLs; H1299; Huh7; iSLK; MSC; HEC-1-A; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26304
mod ID: M6ASITE021384 Click to Show/Hide the Full List
mod site chr1:42926555-42926556:- [5]
Sequence CTGCTGGCCTGGATCTCCCCACTCTAGGGGTCAGGCTCCAT
Motif Score 2.475107143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26305
mod ID: M6ASITE021385 Click to Show/Hide the Full List
mod site chr1:42926618-42926619:- [4]
Sequence ACACACTAATCGAACTATGAACTACAAAGCTTCTATCCCAG
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; AML
Seq Type List m6A-seq; MeRIP-seq; DART-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26306
mod ID: M6ASITE021386 Click to Show/Hide the Full List
mod site chr1:42926625-42926626:- [4]
Sequence CCTAAGGACACACTAATCGAACTATGAACTACAAAGCTTCT
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26307
mod ID: M6ASITE021387 Click to Show/Hide the Full List
mod site chr1:42926634-42926635:- [5]
Sequence GACCTATGTCCTAAGGACACACTAATCGAACTATGAACTAC
Motif Score 2.506922619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26308
mod ID: M6ASITE021388 Click to Show/Hide the Full List
mod site chr1:42926638-42926639:- [4]
Sequence GCTGGACCTATGTCCTAAGGACACACTAATCGAACTATGAA
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; A549; hESC-HEK293T; HepG2; U2OS; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26309
mod ID: M6ASITE021389 Click to Show/Hide the Full List
mod site chr1:42926653-42926654:- [4]
Sequence CAGCTAATCTGTAGGGCTGGACCTATGTCCTAAGGACACAC
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26310
mod ID: M6ASITE021390 Click to Show/Hide the Full List
mod site chr1:42926691-42926692:- [4]
Sequence GGAGACTAAGCCCTGTCGAGACACTTGCCTTCTTCACCCAG
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; A549; hESC-HEK293T; HepG2; U2OS; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26311
mod ID: M6ASITE021391 Click to Show/Hide the Full List
mod site chr1:42926707-42926708:- [4]
Sequence TTCCATGCCTGAGGGTGGAGACTAAGCCCTGTCGAGACACT
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26312
mod ID: M6ASITE021392 Click to Show/Hide the Full List
mod site chr1:42926752-42926753:- [6]
Sequence AGCCTGAGTCTCCTGTGCCCACATCCCAGGCTTCACCCTGA
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26313
mod ID: M6ASITE021393 Click to Show/Hide the Full List
mod site chr1:42926795-42926796:- [5]
Sequence GGTTTTATAATTTTTTTATTACTGATTTTGTTATTTTTATA
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000475162.3; ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26314
mod ID: M6ASITE021394 Click to Show/Hide the Full List
mod site chr1:42926825-42926826:- [4]
Sequence TGTTGCTCAAATCTATTCAGACAAGCAACAGGTTTTATAAT
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8; ENST00000475162.3
External Link RMBase: m6A_site_26315
mod ID: M6ASITE021395 Click to Show/Hide the Full List
mod site chr1:42926847-42926848:- [4]
Sequence AGGATTTTAACAAAAGCAAGACTGTTGCTCAAATCTATTCA
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000426263.8; ENST00000475162.3; ENST00000630287.2
External Link RMBase: m6A_site_26316
mod ID: M6ASITE021396 Click to Show/Hide the Full List
mod site chr1:42926858-42926859:- [5]
Sequence TTAACGGCTCCAGGATTTTAACAAAAGCAAGACTGTTGCTC
Motif Score 2.168095238
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000475162.3; ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26317
mod ID: M6ASITE021397 Click to Show/Hide the Full List
mod site chr1:42926875-42926876:- [5]
Sequence AGAAGAATATTCAGGACTTAACGGCTCCAGGATTTTAACAA
Motif Score 2.142029762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000475162.3; ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26318
mod ID: M6ASITE021398 Click to Show/Hide the Full List
mod site chr1:42926880-42926881:- [4]
Sequence TGTCCAGAAGAATATTCAGGACTTAACGGCTCCAGGATTTT
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000630287.2; ENST00000475162.3; ENST00000426263.8
External Link RMBase: m6A_site_26319
mod ID: M6ASITE021399 Click to Show/Hide the Full List
mod site chr1:42926956-42926957:- [4]
Sequence CAGCTGGATGAGACTTCCAAACCTGACAGATGTCAGCCGAG
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000475162.3; ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26320
mod ID: M6ASITE021400 Click to Show/Hide the Full List
mod site chr1:42926964-42926965:- [4]
Sequence AGCACAGGCAGCTGGATGAGACTTCCAAACCTGACAGATGT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000630287.2; ENST00000426263.8; ENST00000475162.3
External Link RMBase: m6A_site_26321
mod ID: M6ASITE021401 Click to Show/Hide the Full List
mod site chr1:42926981-42926982:- [7]
Sequence CCTAAGGATCTCTCAGGAGCACAGGCAGCTGGATGAGACTT
Motif Score 2.830589286
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000475162.3; ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26322
mod ID: M6ASITE021402 Click to Show/Hide the Full List
mod site chr1:42927026-42927027:- [5]
Sequence AGTGTGAGTCGCCCCAGATCACCAGCCCGGCCTGCTCCCAG
Motif Score 2.026654762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000475162.3; ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26323
mod ID: M6ASITE021403 Click to Show/Hide the Full List
mod site chr1:42927087-42927088:- [4]
Sequence GAGCCAGCCAAAGTGACAAGACACCCGAGGAGCTGTTCCAT
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; fibroblasts; A549; Huh7; GSC-11; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000475162.3; ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26324
mod ID: M6ASITE021404 Click to Show/Hide the Full List
mod site chr1:42927092-42927093:- [5]
Sequence GGGGGGAGCCAGCCAAAGTGACAAGACACCCGAGGAGCTGT
Motif Score 2.859755952
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000475162.3; ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26325
mod ID: M6ASITE021405 Click to Show/Hide the Full List
mod site chr1:42927144-42927145:- [4]
Sequence TTCCTGAGACTAAAGGCCGGACCTTCGATGAGATCGCTTCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; Huh7; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000475162.3; ENST00000630287.2; ENST00000426263.8
External Link RMBase: m6A_site_26326
mod ID: M6ASITE021412 Click to Show/Hide the Full List
mod site chr1:42927156-42927157:- [4]
Sequence CCTACTTCAAAGTTCCTGAGACTAAAGGCCGGACCTTCGAT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; Huh7; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426263.8; ENST00000475162.3; ENST00000630287.2
External Link RMBase: m6A_site_26327
mod ID: M6ASITE021423 Click to Show/Hide the Full List
mod site chr1:42927645-42927646:- [3]
Sequence TTGCAGGCTTCTCCAACTGGACCTCAAATTTCATTGTGGGC
Motif Score 3.622404762
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000475162.3; ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26328
mod ID: M6ASITE021434 Click to Show/Hide the Full List
mod site chr1:42927703-42927704:- [3]
Sequence CCATGGTTCATCGTGGCTGAACTCTTCAGCCAGGGTCCACG
Motif Score 3.373380952
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000426263.8; ENST00000475162.3; ENST00000630287.2
External Link RMBase: m6A_site_26329
mod ID: M6ASITE021445 Click to Show/Hide the Full List
mod site chr1:42929002-42929003:- [8]
Sequence TGGAGCGAGCAGGCCGGCGGACCCTGCACCTCATAGGCCTC
Motif Score 3.622404762
Cell/Tissue List HepG2; HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8; ENST00000475162.3
External Link RMBase: m6A_site_26330
mod ID: M6ASITE021456 Click to Show/Hide the Full List
mod site chr1:42929759-42929760:- [4]
Sequence TGCTAAAGAAGCTGCGCGGGACAGCTGACGTGACCCATGAC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; MM6; endometrial; HEC-1-A
Seq Type List m6A-seq
Transcript ID List ENST00000630287.2; ENST00000475162.3; ENST00000426263.8
External Link RMBase: m6A_site_26331
mod ID: M6ASITE021467 Click to Show/Hide the Full List
mod site chr1:42929886-42929887:- [4]
Sequence CATCAACCGCAACGAGGAGAACCGGGCCAAGAGTGGTACGG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000426263.8; ENST00000630287.2; ENST00000475162.3
External Link RMBase: m6A_site_26332
mod ID: M6ASITE021477 Click to Show/Hide the Full List
mod site chr1:42930000-42930001:- [4]
Sequence CTCCATCATGGGCAACAAGGACCTGTGGCCCCTGCTGCTGA
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000475162.3; ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26333
mod ID: M6ASITE021478 Click to Show/Hide the Full List
mod site chr1:42930021-42930022:- [4]
Sequence CCCCCAGGTGTTCGGCCTGGACTCCATCATGGGCAACAAGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000426263.8; ENST00000475162.3; ENST00000630287.2
External Link RMBase: m6A_site_26334
mod ID: M6ASITE021479 Click to Show/Hide the Full List
mod site chr1:42930799-42930800:- [4]
Sequence GTGCTCATGGGCTTCTCGAAACTGGGCAAGTCCTTTGAGAT
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000372500.4; ENST00000475162.3; ENST00000426263.8; ENST00000625233.2; ENST00000630287.2
External Link RMBase: m6A_site_26335
mod ID: M6ASITE021480 Click to Show/Hide the Full List
mod site chr1:42930842-42930843:- [4]
Sequence GAATTCAATGCTGATGATGAACCTGCTGGCCTTCGTGTCCG
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000426263.8; ENST00000475162.3; ENST00000372500.4; ENST00000630287.2; ENST00000625233.2
External Link RMBase: m6A_site_26336
mod ID: M6ASITE021481 Click to Show/Hide the Full List
mod site chr1:42931181-42931182:- [4]
Sequence TCGAGGAGTTCTACAACCAGACATGGGTCCACCGCTATGGG
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; A549; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000415851.6; ENST00000426263.8; ENST00000475162.3; ENST00000372500.4; ENST00000625233.2; ENST00000630287.2
External Link RMBase: m6A_site_26337
mod ID: M6ASITE021482 Click to Show/Hide the Full List
mod site chr1:42931189-42931190:- [6]
Sequence GCAGGTGATCGAGGAGTTCTACAACCAGACATGGGTCCACC
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000475162.3; ENST00000426263.8; ENST00000372500.4; ENST00000625233.2; ENST00000630287.2; ENST00000415851.6
External Link RMBase: m6A_site_26338
mod ID: M6ASITE021483 Click to Show/Hide the Full List
mod site chr1:42943064-42943065:- [4]
Sequence TGGCCCTGATCATGTCAGAGACTCTTCTCTTGCTTTGGAAT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; A549; Jurkat; peripheral-blood; GSC-11; iSLK; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000475162.3; ENST00000630287.2; ENST00000630821.1; ENST00000426263.8; ENST00000372500.4; ENST00000625233.2; ENST00000415851.6
External Link RMBase: m6A_site_26339
mod ID: M6ASITE021484 Click to Show/Hide the Full List
mod site chr1:42943195-42943196:- [4]
Sequence GTGCCATCGTTGGCTTATGGACACCAGCCTGCTCTGTTGCA
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; A549; Jurkat; CD4T; GSC-11; iSLK; endometrial; HEC-1-A; GSCs; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000475162.3; ENST00000372500.4; ENST00000630287.2; ENST00000415851.6; ENST00000630821.1; ENST00000426263.8; ENST00000625233.2
External Link RMBase: m6A_site_26340
mod ID: M6ASITE021485 Click to Show/Hide the Full List
mod site chr1:42943253-42943254:- [6]
Sequence CTCCCTGCAGTTTGGCTACAACACTGGAGTCATCAATGCCC
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000630287.2; ENST00000426263.8; ENST00000372500.4; ENST00000415851.6; ENST00000625233.2; ENST00000630821.1
External Link RMBase: m6A_site_26341
mod ID: M6ASITE021486 Click to Show/Hide the Full List
mod site chr1:42958743-42958744:- [4]
Sequence GTCGCAGTGGGAGTCCCCGGACCGGAGCACGAGCCTGAGCG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; U2OS; H1A; H1B; hESCs; fibroblasts; LCLs; MT4; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000625233.2; ENST00000372500.4; ENST00000630821.1; ENST00000630287.2; ENST00000426263.8; ENST00000460369.3; ENST00000415851.6
External Link RMBase: m6A_site_26342
mod ID: M6ASITE021487 Click to Show/Hide the Full List
mod site chr1:42958789-42958790:- [4]
Sequence AGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAG
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; A549; U2OS; H1A; H1B; hESCs; HEK293T; fibroblasts; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000460369.3; ENST00000625233.2; ENST00000415851.6; ENST00000630821.1; ENST00000372500.4; ENST00000426263.8; ENST00000630287.2
External Link RMBase: m6A_site_26343
mod ID: M6ASITE021488 Click to Show/Hide the Full List
mod site chr1:42958981-42958982:- [4]
Sequence CCCGCAGAGCGCCGCCCAGGACAGGCTGGGCCCCAGGCCCC
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000426263.8
External Link RMBase: m6A_site_26344
Pseudouridine (Pseudo)
In total 4 m6A sequence/site(s) in this target gene
mod ID: PSESITE000036 Click to Show/Hide the Full List
mod site chr1:42926243-42926244:- [9]
Sequence ATTAAATACAGACACTAAGTTATAGTATATCTGGACAAGCC
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: Pseudo_site_141
mod ID: PSESITE000039 Click to Show/Hide the Full List
mod site chr1:42926726-42926727:- [10]
Sequence CAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGAC
Transcript ID List ENST00000630287.2; ENST00000426263.8
External Link RMBase: Pseudo_site_142
mod ID: PSESITE000041 Click to Show/Hide the Full List
mod site chr1:42926727-42926728:- [10]
Sequence CCAGGCTTCACCCTGAATGGTTCCATGCCTGAGGGTGGAGA
Transcript ID List ENST00000426263.8; ENST00000630287.2
External Link RMBase: Pseudo_site_143
mod ID: PSESITE000044 Click to Show/Hide the Full List
mod site chr1:42931129-42931130:- [9]
Sequence GCCCACCACGCTCACCACGCTCTGGTCCCTCTCAGTGGCCA
Transcript ID List ENST00000625233.2; ENST00000426263.8; ENST00000630287.2; ENST00000415851.6; ENST00000475162.3; ENST00000372500.4
External Link RMBase: Pseudo_site_144