Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00377)
Target Name Dexamethasone-induced Ras-related protein 1 (RASD1)
Synonyms
Activator of G-protein signaling 1
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Gene Name RASD1
Sequence
MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDFHRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLRQQILDTKSCLKNKTKENVDVPLVICGNKGDRDFYREVDQREIEQLVGDDPQRCAYFEISAKKNSSLDQMFRALFAMAKLPSEMSPDLHRKVSVQYCDVLHKKALRNKKLLRAGSGGGGGDPGDAFGIVAPFARRPSVHSDLMYIREKASAGSQAKDKERCVIS
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Family Small GTPase superfamily, RasD family
Function
Small GTPase. Negatively regulates the transcription regulation activity of the APBB1/FE65-APP complex via its interaction with APBB1/FE65 (By similarity).
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Gene ID 51655
HGNC ID HGNC:15828
Ensembl Gene ID ENSG00000108551
KEGG ID hsa:51655
Chromosomal Location 17p11.2
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00377)
Dexamethasone-induced Ras-related protein 1 (RASD1)
5-methylcytidine (m5C)
In total 3 m6A sequence/site(s) in this target gene
mod ID: M5CSITE000991 Click to Show/Hide the Full List
mod site chr17:17494981-17494982:- [1]
Sequence CCCCAGCACTGGGGAGGCGCCACTGAACCGAGAAGGGACGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000225688.4; ENST00000579152.1
External Link RMBase: m5C_site_18172
mod ID: M5CSITE000992 Click to Show/Hide the Full List
mod site chr17:17494982-17494983:- [1]
Sequence CCCCCAGCACTGGGGAGGCGCCACTGAACCGAGAAGGGACG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m5C_site_18173
mod ID: M5CSITE000993 Click to Show/Hide the Full List
mod site chr17:17494984-17494985:- [1]
Sequence CGCCCCCAGCACTGGGGAGGCGCCACTGAACCGAGAAGGGA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m5C_site_18174
N6-methyladenosine (m6A)
In total 31 m6A sequence/site(s) in this target gene
mod ID: M6ASITE030591 Click to Show/Hide the Full List
mod site chr17:17494533-17494534:- [2]
Sequence TCAACATGGACACGAACAAAACCTTACCCAGGTGTTTATAC
Motif Score 2.185083333
Cell/Tissue List HepG2; HeLa; A549; H1B; hNPCs; Huh7; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4
External Link RMBase: m6A_site_350788
mod ID: M6ASITE030592 Click to Show/Hide the Full List
mod site chr17:17494538-17494539:- [2]
Sequence CGGTGTCAACATGGACACGAACAAAACCTTACCCAGGTGTT
Motif Score 2.951386905
Cell/Tissue List HepG2; HeLa; A549; H1B; hNPCs; Huh7; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4
External Link RMBase: m6A_site_350789
mod ID: M6ASITE030593 Click to Show/Hide the Full List
mod site chr17:17494544-17494545:- [2]
Sequence TAGTTCCGGTGTCAACATGGACACGAACAAAACCTTACCCA
Motif Score 3.643047619
Cell/Tissue List HepG2; HeLa; A549; H1B; hNPCs; Huh7; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4
External Link RMBase: m6A_site_350790
mod ID: M6ASITE030594 Click to Show/Hide the Full List
mod site chr17:17494580-17494581:- [2]
Sequence ACAAAGGAACACAAAACAAAACTTGCACTTTAACGGTAGTT
Motif Score 2.627720238
Cell/Tissue List HepG2; HeLa; A549; H1B; hNPCs; Huh7; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4
External Link RMBase: m6A_site_350791
mod ID: M6ASITE030595 Click to Show/Hide the Full List
mod site chr17:17494585-17494586:- [2]
Sequence ACTGCACAAAGGAACACAAAACAAAACTTGCACTTTAACGG
Motif Score 2.20572619
Cell/Tissue List HepG2; HeLa; A549; H1B; hNPCs; Huh7; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4
External Link RMBase: m6A_site_350792
mod ID: M6ASITE030596 Click to Show/Hide the Full List
mod site chr17:17494592-17494593:- [2]
Sequence GAGTGAAACTGCACAAAGGAACACAAAACAAAACTTGCACT
Motif Score 2.951386905
Cell/Tissue List HepG2; HeLa; A549; H1A; H1B; hNPCs; hESCs; Huh7; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4
External Link RMBase: m6A_site_350793
mod ID: M6ASITE030597 Click to Show/Hide the Full List
mod site chr17:17494605-17494606:- [2]
Sequence CTTGTTTACATGTGAGTGAAACTGCACAAAGGAACACAAAA
Motif Score 2.627720238
Cell/Tissue List HepG2; HeLa; A549; H1A; H1B; hNPCs; hESCs; Huh7; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4
External Link RMBase: m6A_site_350794
mod ID: M6ASITE030598 Click to Show/Hide the Full List
mod site chr17:17494664-17494665:- [2]
Sequence AGAGCCTCTGCCCTCCCAAAACTAAGCGGGGGGGCGTGGGT
Motif Score 2.627720238
Cell/Tissue List HepG2; HeLa; A549; H1B; hNPCs; Huh7; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4
External Link RMBase: m6A_site_350795
mod ID: M6ASITE030599 Click to Show/Hide the Full List
mod site chr17:17494693-17494694:- [3]
Sequence TGTGATTCCGGGTTGCTGTGACAGCCGGTAGAGCCTCTGCC
Motif Score 2.859755952
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000225688.4
External Link RMBase: m6A_site_350796
mod ID: M6ASITE030600 Click to Show/Hide the Full List
mod site chr17:17494735-17494736:- [2]
Sequence ATGCCCGCTTGAGGGTCAGGACCCACGGGGCATTATCTTGT
Motif Score 3.622404762
Cell/Tissue List HepG2; HeLa; A549; H1A; H1B; hNPCs; Huh7; HEK293A-TOA; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350797
mod ID: M6ASITE030601 Click to Show/Hide the Full List
mod site chr17:17494761-17494762:- [2]
Sequence CCTCTGCTAGGCTTCAAGAAACCGTCATGCCCGCTTGAGGG
Motif Score 2.185083333
Cell/Tissue List HepG2; HeLa; A549; H1A; H1B; hNPCs; Huh7; HEK293A-TOA; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350798
mod ID: M6ASITE030602 Click to Show/Hide the Full List
mod site chr17:17494827-17494828:- [2]
Sequence GTGGATTTATCTTCTCAAAGACCTAAGAGTGAGCGCGGGGT
Motif Score 2.876744048
Cell/Tissue List HepG2; HEK293T; HeLa; A549; H1A; H1B; hNPCs; Huh7; Jurkat; HEK293A-TOA; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350799
mod ID: M6ASITE030603 Click to Show/Hide the Full List
mod site chr17:17494920-17494921:- [4]
Sequence GAGAACGGGCCAAGACTGGGACTATTCCCCACCCCCGGTCC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hNPCs; hESCs; Jurkat; GSC-11; HEK293A-TOA; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350800
mod ID: M6ASITE030604 Click to Show/Hide the Full List
mod site chr17:17494926-17494927:- [4]
Sequence AGGAAAGAGAACGGGCCAAGACTGGGACTATTCCCCACCCC
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hNPCs; hESCs; Jurkat; GSC-11; HEK293A-TOA; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4; ENST00000579152.1
External Link RMBase: m6A_site_350801
mod ID: M6ASITE030605 Click to Show/Hide the Full List
mod site chr17:17494975-17494976:- [4]
Sequence CACTGGGGAGGCGCCACTGAACCGAGAAGGGACGGTCATCT
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hNPCs; Jurkat; GSC-11; HEK293A-TOA; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4; ENST00000579152.1
External Link RMBase: m6A_site_350802
mod ID: M6ASITE030606 Click to Show/Hide the Full List
mod site chr17:17495029-17495030:- [4]
Sequence CAGGCCGGGAGCGCGCGCGGACTGGCGTCTCCCCTCCCGGC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hNPCs; Jurkat; GSC-11; HEK293A-TOA; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350803
mod ID: M6ASITE030607 Click to Show/Hide the Full List
mod site chr17:17495088-17495089:- [4]
Sequence GGCGACACAACCTAAGGAGGACCTTTTTGTTAAGTCAAATC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hNPCs; Jurkat; GSC-11; HEK293A-TOA; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350804
mod ID: M6ASITE030608 Click to Show/Hide the Full List
mod site chr17:17495149-17495150:- [4]
Sequence CGCCGGCAGCCAGGCCAAGGACAAGGAGCGCTGCGTCATCA
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; A549; H1A; H1B; hNPCs; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4; ENST00000579152.1
External Link RMBase: m6A_site_350805
mod ID: M6ASITE030609 Click to Show/Hide the Full List
mod site chr17:17495299-17495300:- [2]
Sequence GCACAAGAAGGCGCTGCGGAACAAGAAGCTGCTGCGGGCCG
Motif Score 2.951386905
Cell/Tissue List HepG2; brain; MSC; TIME; endometrial
Seq Type List m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List ENST00000225688.4; ENST00000579152.1
External Link RMBase: m6A_site_350806
mod ID: M6ASITE030610 Click to Show/Hide the Full List
mod site chr17:17495359-17495360:- [2]
Sequence GCCCAGCGAGATGAGCCCAGACCTGCACCGCAAGGTCTCGG
Motif Score 2.876744048
Cell/Tissue List HepG2; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350807
mod ID: M6ASITE030611 Click to Show/Hide the Full List
mod site chr17:17495416-17495417:- [2]
Sequence CAAGAAGAACAGCAGCCTGGACCAGATGTTCCGCGCGCTCT
Motif Score 3.622404762
Cell/Tissue List HepG2; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350808
mod ID: M6ASITE030612 Click to Show/Hide the Full List
mod site chr17:17495428-17495429:- [2]
Sequence CGAGATCTCGGCCAAGAAGAACAGCAGCCTGGACCAGATGT
Motif Score 2.951386905
Cell/Tissue List HepG2; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000225688.4; ENST00000579152.1
External Link RMBase: m6A_site_350809
mod ID: M6ASITE030613 Click to Show/Hide the Full List
mod site chr17:17495503-17495504:- [2]
Sequence CGACTTCTACCGCGAGGTGGACCAGCGCGAGATCGAGCAGC
Motif Score 3.622404762
Cell/Tissue List HepG2; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350810
mod ID: M6ASITE030614 Click to Show/Hide the Full List
mod site chr17:17495536-17495537:- [3]
Sequence GCCCCTGGTCATCTGCGGCAACAAGGGTGACCGCGACTTCT
Motif Score 2.173910714
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000225688.4; ENST00000579152.1
External Link RMBase: m6A_site_350811
mod ID: M6ASITE030615 Click to Show/Hide the Full List
mod site chr17:17495576-17495577:- [2]
Sequence AGTCTTGCCTCAAGAACAAAACCAAGGAGAACGTGGACGTG
Motif Score 2.185083333
Cell/Tissue List HepG2; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350812
mod ID: M6ASITE030616 Click to Show/Hide the Full List
mod site chr17:17495581-17495582:- [2]
Sequence CACCAAGTCTTGCCTCAAGAACAAAACCAAGGAGAACGTGG
Motif Score 2.951386905
Cell/Tissue List HepG2; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350813
mod ID: M6ASITE030617 Click to Show/Hide the Full List
mod site chr17:17495653-17495654:- [4]
Sequence CATCCTGGTGTTCAGTCTGGACAACCGCGACTCCTTCGAGG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000225688.4; ENST00000579152.1
External Link RMBase: m6A_site_350814
mod ID: M6ASITE030618 Click to Show/Hide the Full List
mod site chr17:17496005-17496006:- [2]
Sequence CTACACGCCTACCATCGAGGACTTCCACCGCAAGTTCTACT
Motif Score 4.065041667
Cell/Tissue List HepG2; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000225688.4; ENST00000579152.1
External Link RMBase: m6A_site_350815
mod ID: M6ASITE030619 Click to Show/Hide the Full List
mod site chr17:17496113-17496114:- [2]
Sequence GCTGAGTATCCCGGCCAAGAACTGCTATCGCATGGTCATCC
Motif Score 3.373380952
Cell/Tissue List HepG2; A549; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000225688.4; ENST00000579152.1
External Link RMBase: m6A_site_350816
mod ID: M6ASITE030620 Click to Show/Hide the Full List
mod site chr17:17496175-17496176:- [2]
Sequence CGGCCCCTCTGCCCAATGAAACTGGCCGCGATGATCAAGAA
Motif Score 2.627720238
Cell/Tissue List HepG2; A549; H1A; Jurkat; GSC-11; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350817
mod ID: M6ASITE030621 Click to Show/Hide the Full List
mod site chr17:17496361-17496362:- [2]
Sequence TGTGCCCAGATCCTGGGAGAACCCCAGCCGAGCCCAGCCTA
Motif Score 2.930744048
Cell/Tissue List HepG2; HeLa; A549; H1A; Jurkat; GSC-11; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000579152.1; ENST00000225688.4
External Link RMBase: m6A_site_350818