General Information of the Epigenetic Target (ID: EPITAR00376)
Target Name Protein SET (SET)
Synonyms
HLA-DR-associated protein II; Inhibitor of granzyme A-activated DNase; IGAAD; PHAPII; Phosphatase 2A inhibitor I2PP2A; I-2PP2A; Template-activating factor I; TAF-I
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Gene Name SET
Sequence
MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
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Family Nucleosome assembly protein (NAP) family
Function
Multitasking protein, involved in apoptosis, transcription, nucleosome assembly and histone chaperoning. Isoform 2 anti-apoptotic activity is mediated by inhibition of the GZMA-activated DNase, NME1. In the course of cytotoxic T-lymphocyte (CTL)-induced apoptosis, GZMA cleaves SET, disrupting its binding to NME1 and releasing NME1 inhibition. Isoform 1 and isoform 2 are potent inhibitors of protein phosphatase 2A. Isoform 1 and isoform 2 inhibit EP300/CREBBP and PCAF-mediated acetylation of histones (HAT) and nucleosomes, most probably by masking the accessibility of lysines of histones to the acetylases. The predominant target for inhibition is histone H4. HAT inhibition leads to silencing of HAT-dependent transcription and prevents active demethylation of DNA. Both isoforms stimulate DNA replication of the adenovirus genome complexed with viral core proteins; however, isoform 2 specific activity is higher.
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Gene ID 6418
HGNC ID HGNC:10760
Ensembl Gene ID ENSG00000119335
KEGG ID hsa:6418
Chromosomal Location 9q34.11
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00376)
Protein SET (SET)
2'-O-Methylation (2'-O-Me)
In total 4 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000515 Click to Show/Hide the Full List
mod site chr9:128689291-128689292:+ [1]
Sequence GCGAGCTGGCTGGATCGCCGAGCGCGAGTGAGGGAGCCGAG
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000372692.8; ENST00000409104.7; ENST00000322030.12
External Link RMBase: Nm_site_6712
mod ID: 2OMSITE000516 Click to Show/Hide the Full List
mod site chr9:128689293-128689294:+ [1]
Sequence GAGCTGGCTGGATCGCCGAGCGCGAGTGAGGGAGCCGAGCC
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000372692.8; ENST00000409104.7; ENST00000322030.12
External Link RMBase: Nm_site_6713
mod ID: 2OMSITE000517 Click to Show/Hide the Full List
mod site chr9:128694661-128694662:+ [1]
Sequence AGGATGAAGGAGAAGATGACTAAATAGAACACTGATGGATT
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000372686.5; ENST00000372688.8; ENST00000409104.7; ENST00000322030.12; ENST00000372692.8
External Link RMBase: Nm_site_6714
mod ID: 2OMSITE000518 Click to Show/Hide the Full List
mod site chr9:128695088-128695089:+ [1]
Sequence GAGTACACTGTGTCTCTATGTGAATATGGACAGTTAGCATT
Cell/Tissue List HEK293
Seq Type List Nm-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: Nm_site_6715
5-methylcytidine (m5C)
In total 10 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004488 Click to Show/Hide the Full List
mod site chr9:128689334-128689335:+ [2]
Sequence GCCCGCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAG
Seq Type List Bisulfite-seq
Transcript ID List rmsk_2886801; ENST00000322030.12; ENST00000409104.7; ENST00000372692.8
External Link RMBase: m5C_site_43611
mod ID: M5CSITE004489 Click to Show/Hide the Full List
mod site chr9:128689335-128689336:+ [2]
Sequence CCCGCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAGC
Seq Type List Bisulfite-seq
Transcript ID List rmsk_2886801; ENST00000409104.7; ENST00000322030.12; ENST00000372692.8
External Link RMBase: m5C_site_43612
mod ID: M5CSITE004490 Click to Show/Hide the Full List
mod site chr9:128689337-128689338:+ [2]
Sequence CGCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAGCCC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000409104.7; rmsk_2886801; ENST00000372692.8; ENST00000322030.12
External Link RMBase: m5C_site_43613
mod ID: M5CSITE004491 Click to Show/Hide the Full List
mod site chr9:128689338-128689339:+ [2]
Sequence GCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAGCCCG
Seq Type List Bisulfite-seq
Transcript ID List rmsk_2886801; ENST00000372692.8; ENST00000409104.7; ENST00000322030.12
External Link RMBase: m5C_site_43614
mod ID: M5CSITE004492 Click to Show/Hide the Full List
mod site chr9:128689339-128689340:+ [2]
Sequence CCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAGCCCGG
Seq Type List Bisulfite-seq
Transcript ID List rmsk_2886801; ENST00000372692.8; ENST00000322030.12; ENST00000409104.7
External Link RMBase: m5C_site_43615
mod ID: M5CSITE004493 Click to Show/Hide the Full List
mod site chr9:128689340-128689341:+ [2]
Sequence CGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAGCCCGGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000372692.8; ENST00000409104.7; rmsk_2886801; ENST00000322030.12
External Link RMBase: m5C_site_43616
mod ID: M5CSITE004494 Click to Show/Hide the Full List
mod site chr9:128689342-128689343:+ [2]
Sequence CCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAGCCCGGGCC
Seq Type List Bisulfite-seq
Transcript ID List rmsk_2886801; ENST00000322030.12; ENST00000409104.7; ENST00000372692.8
External Link RMBase: m5C_site_43617
mod ID: M5CSITE004495 Click to Show/Hide the Full List
mod site chr9:128689343-128689344:+ [2]
Sequence CGCCGCCTCCGCCTCCCCTCCGCGAACAGGAGCCCGGGCCG
Seq Type List Bisulfite-seq
Transcript ID List rmsk_2886801; ENST00000322030.12; ENST00000409104.7; ENST00000372692.8
External Link RMBase: m5C_site_43618
mod ID: M5CSITE004496 Click to Show/Hide the Full List
mod site chr9:128692151-128692152:+
Sequence ATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACTTGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000322030.12; ENST00000480536.1; ENST00000477806.5; ENST00000409104.7; ENST00000372688.8; rmsk_2886808; ENST00000372686.5; ENST00000480217.5; ENST00000372692.8
External Link RMBase: m5C_site_43619
mod ID: M5CSITE004497 Click to Show/Hide the Full List
mod site chr9:128693765-128693766:+ [2]
Sequence GCTGATGAGTTAGGAGAGGTCATCAAAGATGATATTTGGCC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000372688.8; ENST00000322030.12; ENST00000372686.5; ENST00000372692.8; ENST00000477806.5; ENST00000409104.7
External Link RMBase: m5C_site_43620
N6-methyladenosine (m6A)
In total 70 m6A sequence/site(s) in this target gene
mod ID: M6ASITE089706 Click to Show/Hide the Full List
mod site chr9:128683861-128683862:+ [3]
Sequence GCTTCCGGACGGGCGAGGAGACTCGTGGTCTGGTTCTGGGA
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; A549; H1A; H1B; fibroblasts; Huh7; CD4T; peripheral-blood; HEK293T; HEK293A-TOA; iSLK; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000454747.1; ENST00000372692.8
External Link RMBase: m6A_site_841242
mod ID: M6ASITE089707 Click to Show/Hide the Full List
mod site chr9:128683881-128683882:+ [3]
Sequence ACTCGTGGTCTGGTTCTGGGACTTCCCTAACAGCATGGCCC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; A549; H1A; H1B; fibroblasts; Huh7; CD4T; peripheral-blood; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000372692.8; ENST00000454747.1
External Link RMBase: m6A_site_841243
mod ID: M6ASITE089708 Click to Show/Hide the Full List
mod site chr9:128683939-128683940:+ [3]
Sequence CTCCCGCCTCAAAAGAAGAAACCAAGACCACCTCCTGCTCT
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HepG2; A549; H1A; H1B; fibroblasts; LCLs; Huh7; CD4T; peripheral-blood; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000454747.1; ENST00000372692.8
External Link RMBase: m6A_site_841244
mod ID: M6ASITE089709 Click to Show/Hide the Full List
mod site chr9:128683945-128683946:+ [3]
Sequence CCTCAAAAGAAGAAACCAAGACCACCTCCTGCTCTGGGACC
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HepG2; A549; H1A; H1B; fibroblasts; LCLs; Huh7; CD4T; peripheral-blood; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000454747.1; ENST00000372692.8
External Link RMBase: m6A_site_841245
mod ID: M6ASITE089710 Click to Show/Hide the Full List
mod site chr9:128683963-128683964:+ [3]
Sequence AGACCACCTCCTGCTCTGGGACCGGAGGAGACATCGGCCTC
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; A549; H1A; H1B; fibroblasts; LCLs; MM6; Huh7; CD4T; peripheral-blood; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000372692.8; ENST00000454747.1
External Link RMBase: m6A_site_841246
mod ID: M6ASITE089711 Click to Show/Hide the Full List
mod site chr9:128683973-128683974:+ [3]
Sequence CTGCTCTGGGACCGGAGGAGACATCGGCCTCTGCAGGCTTG
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; A549; H1A; H1B; fibroblasts; LCLs; MM6; Huh7; CD4T; peripheral-blood; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000454747.1; ENST00000372692.8
External Link RMBase: m6A_site_841247
mod ID: M6ASITE089712 Click to Show/Hide the Full List
mod site chr9:128685124-128685125:+ [3]
Sequence TACCTCAGGGCTCAGTGTGGACCTGTTGGCACTTTTACTGG
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; A549; H1A; H1B; fibroblasts; LCLs; MM6; Huh7; CD4T; peripheral-blood; HEK293T; iSLK; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000409104.7; ENST00000372692.8
External Link RMBase: m6A_site_841248
mod ID: M6ASITE089713 Click to Show/Hide the Full List
mod site chr9:128685180-128685181:+ [3]
Sequence CCTCCACATGGGATGCAGAGACCTCCTGCCCAGCTTGAAAC
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HepG2; U2OS; H1B; HEK293T; fibroblasts; A549; Jurkat; CD4T; GSC-11; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000409104.7; ENST00000372692.8
External Link RMBase: m6A_site_841249
mod ID: M6ASITE089714 Click to Show/Hide the Full List
mod site chr9:128685199-128685200:+ [3]
Sequence GACCTCCTGCCCAGCTTGAAACCTACCTTGCTGGGTGAGCC
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HepG2; U2OS; H1B; HEK293T; fibroblasts; A549; Jurkat; CD4T; GSC-11; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000372692.8; ENST00000409104.7
External Link RMBase: m6A_site_841250
mod ID: M6ASITE089715 Click to Show/Hide the Full List
mod site chr9:128689348-128689349:+ [3]
Sequence CCTCCGCCTCCCCTCCGCGAACAGGAGCCCGGGCCGGGGCC
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; A549; U2OS; H1A; H1B; MT4; H1299; MM6; Jurkat; CD4T; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000409104.7; ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841251
mod ID: M6ASITE089716 Click to Show/Hide the Full List
mod site chr9:128689474-128689475:+ [3]
Sequence CGCCGGGAGGAGGCGGCCGGACCGAGCGGGCGCCCGCGCGT
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; A549; U2OS; H1A; MT4; H1299; MM6; Jurkat; CD4T; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000409104.7; ENST00000372692.8; rmsk_2886803; ENST00000322030.12
External Link RMBase: m6A_site_841252
mod ID: M6ASITE089717 Click to Show/Hide the Full List
mod site chr9:128689648-128689649:+ [3]
Sequence ACCACGACGGGGCCGACGAGACCTCAGGTGAGAGCAGCGAG
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HepG2; U2OS; hNPCs; HEK293T; fibroblasts; LCLs; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000409104.7; ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841253
mod ID: M6ASITE089718 Click to Show/Hide the Full List
mod site chr9:128690281-128690282:+ [3]
Sequence TCGCGCCAGCGTGCGGAGAAACCTGGCGCCGCGACCAGTGT
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; hNPCs; HEK293T; fibroblasts; A549; H1299; MM6; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000409104.7; ENST00000372692.8; ENST00000477806.5; ENST00000466009.5; ENST00000322030.12; ENST00000372686.5; ENST00000372688.8
External Link RMBase: m6A_site_841254
mod ID: M6ASITE089719 Click to Show/Hide the Full List
mod site chr9:128691121-128691122:+ [4]
Sequence ATAGTATTAACATCTGGAAAACTAGGTAAATTTATCTTAGA
Motif Score 2.627720238
Cell/Tissue List hNPCs; HEK293T; fibroblasts; LCLs; A549; H1299; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000372688.8; ENST00000372692.8; ENST00000480217.5; ENST00000322030.12; ENST00000372686.5; ENST00000480536.1; ENST00000409104.7; ENST00000466009.5; ENST00000477806.5
External Link RMBase: m6A_site_841255
mod ID: M6ASITE089720 Click to Show/Hide the Full List
mod site chr9:128691176-128691177:+ [5]
Sequence TCCTTTTTTGCAGAAAAAGAACAGCAAGAAGCGATTGAACA
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T; hNPCs; fibroblasts; LCLs; A549; H1299; MM6; Huh7
Seq Type List MAZTER-seq; m6A-seq; MeRIP-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8; ENST00000480217.5; ENST00000372688.8; ENST00000477806.5; ENST00000409104.7; ENST00000480536.1; ENST00000466009.5; ENST00000372686.5
External Link RMBase: m6A_site_841256
mod ID: M6ASITE089721 Click to Show/Hide the Full List
mod site chr9:128691194-128691195:+ [5]
Sequence GAACAGCAAGAAGCGATTGAACACATTGATGAAGTACAAAA
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T; hNPCs; fibroblasts; LCLs; A549; H1299; MM6; Huh7
Seq Type List MAZTER-seq; m6A-seq; MeRIP-seq
Transcript ID List ENST00000372686.5; ENST00000477806.5; ENST00000372688.8; ENST00000409104.7; ENST00000322030.12; ENST00000480217.5; ENST00000372692.8; ENST00000480536.1; ENST00000466009.5
External Link RMBase: m6A_site_841257
mod ID: M6ASITE089722 Click to Show/Hide the Full List
mod site chr9:128691209-128691210:+ [6]
Sequence ATTGAACACATTGATGAAGTACAAAATGAAATAGACAGGTA
Motif Score 2.856142857
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000480217.5; ENST00000372692.8; ENST00000409104.7; ENST00000480536.1; ENST00000322030.12; ENST00000477806.5; ENST00000466009.5; ENST00000372688.8; ENST00000372686.5
External Link RMBase: m6A_site_841258
mod ID: M6ASITE089723 Click to Show/Hide the Full List
mod site chr9:128691223-128691224:+ [5]
Sequence TGAAGTACAAAATGAAATAGACAGGTAACATTTTTCTTAAT
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T; hNPCs; fibroblasts; LCLs; A549; H1299; MM6; Huh7
Seq Type List MAZTER-seq; m6A-seq; MeRIP-seq
Transcript ID List ENST00000480217.5; ENST00000372688.8; ENST00000409104.7; ENST00000466009.5; ENST00000480536.1; ENST00000372692.8; ENST00000477806.5; ENST00000322030.12; ENST00000372686.5
External Link RMBase: m6A_site_841259
mod ID: M6ASITE089724 Click to Show/Hide the Full List
mod site chr9:128691866-128691867:+ [4]
Sequence ATTTGCTTCAGACTTAATGAACAAGCCAGTGAGGAGATTTT
Motif Score 2.951386905
Cell/Tissue List hNPCs; HEK293T; fibroblasts; LCLs; A549; H1299; MM6; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000480217.5; ENST00000372688.8; ENST00000322030.12; ENST00000409104.7; ENST00000480536.1; ENST00000477806.5; ENST00000372686.5; ENST00000466009.5; ENST00000372692.8
External Link RMBase: m6A_site_841260
mod ID: M6ASITE089725 Click to Show/Hide the Full List
mod site chr9:128691896-128691897:+ [4]
Sequence GAGGAGATTTTGAAAGTAGAACAGAAATATAACAAACTCCG
Motif Score 2.951386905
Cell/Tissue List hNPCs; HEK293T; fibroblasts; LCLs; A549; H1299; MM6; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000466009.5; ENST00000322030.12; ENST00000480536.1; ENST00000372688.8; ENST00000372692.8; ENST00000477806.5; ENST00000480217.5; ENST00000372686.5; ENST00000409104.7
External Link RMBase: m6A_site_841261
mod ID: M6ASITE089726 Click to Show/Hide the Full List
mod site chr9:128691907-128691908:+ [5]
Sequence GAAAGTAGAACAGAAATATAACAAACTCCGCCAACCATTTT
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000480217.5; ENST00000409104.7; ENST00000477806.5; ENST00000322030.12; ENST00000372686.5; ENST00000372688.8; ENST00000466009.5; ENST00000372692.8; ENST00000480536.1
External Link RMBase: m6A_site_841262
mod ID: M6ASITE089727 Click to Show/Hide the Full List
mod site chr9:128691911-128691912:+ [4]
Sequence GTAGAACAGAAATATAACAAACTCCGCCAACCATTTTTTCA
Motif Score 2.627720238
Cell/Tissue List hNPCs; HEK293T; fibroblasts; LCLs; A549; H1299; MM6; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000477806.5; ENST00000372692.8; ENST00000466009.5; ENST00000480217.5; ENST00000409104.7; ENST00000322030.12; ENST00000372688.8; ENST00000480536.1; ENST00000372686.5
External Link RMBase: m6A_site_841263
mod ID: M6ASITE089728 Click to Show/Hide the Full List
mod site chr9:128691975-128691976:+ [5]
Sequence AAATCCCAAATTTTTGGGTAACAACATTTGTCAACCATCCA
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000409104.7; ENST00000322030.12; ENST00000372688.8; ENST00000480217.5; ENST00000372686.5; ENST00000477806.5; ENST00000372692.8; ENST00000480536.1
External Link RMBase: m6A_site_841264
mod ID: M6ASITE089729 Click to Show/Hide the Full List
mod site chr9:128691995-128691996:+ [5]
Sequence ACAACATTTGTCAACCATCCACAAGGTATGTTTTGGACAGG
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000480536.1; ENST00000409104.7; ENST00000480217.5; ENST00000322030.12; ENST00000477806.5; ENST00000372688.8; ENST00000372692.8; ENST00000372686.5
External Link RMBase: m6A_site_841265
mod ID: M6ASITE089730 Click to Show/Hide the Full List
mod site chr9:128692389-128692390:+ [7]
Sequence GCCTGGGCGACAAGAGTGAGACTGTTTCAAAAAAAAAAAAA
Motif Score 3.319380952
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000485056.1; ENST00000409104.7; ENST00000480536.1; ENST00000480217.5; ENST00000372686.5; ENST00000477806.5; ENST00000322030.12; ENST00000372692.8; rmsk_2886808; ENST00000372688.8
External Link RMBase: m6A_site_841266
mod ID: M6ASITE089731 Click to Show/Hide the Full List
mod site chr9:128692421-128692422:+ [7]
Sequence AAAAAAAAAAAAAAAAAAAAACCTCAAAGACGGGAAAAGAT
Motif Score 2.185083333
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000477806.5; ENST00000322030.12; ENST00000480217.5; ENST00000409104.7; ENST00000372692.8; ENST00000372688.8; ENST00000485056.1; ENST00000372686.5; rmsk_2886808; ENST00000480536.1
External Link RMBase: m6A_site_841267
mod ID: M6ASITE089732 Click to Show/Hide the Full List
mod site chr9:128692668-128692669:+ [6]
Sequence TTTTCTGGCCTAGTGTCTGCACTGCTTGGGGAGGAAGATGA
Motif Score 3.252583333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000372692.8; ENST00000480217.5; ENST00000372686.5; ENST00000372688.8; ENST00000409104.7; ENST00000322030.12; ENST00000485056.1; ENST00000477806.5; ENST00000480536.1
External Link RMBase: m6A_site_841268
mod ID: M6ASITE089733 Click to Show/Hide the Full List
mod site chr9:128692723-128692724:+ [6]
Sequence ATTTGACCAGAGTTGAAGTGACAGAATTTGAAGATATTAAA
Motif Score 2.859755952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000480217.5; ENST00000409104.7; ENST00000372688.8; ENST00000372692.8; ENST00000477806.5; ENST00000480536.1; ENST00000485056.1; ENST00000372686.5; ENST00000322030.12
External Link RMBase: m6A_site_841269
mod ID: M6ASITE089734 Click to Show/Hide the Full List
mod site chr9:128692751-128692752:+ [8]
Sequence TGAAGATATTAAATCAGGTTACAGAATAGATTTTGTAAGTA
Motif Score 2.07285119
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000409104.7; ENST00000372692.8; ENST00000480536.1; ENST00000322030.12; ENST00000480217.5; ENST00000477806.5; ENST00000372688.8; ENST00000485056.1; ENST00000372686.5
External Link RMBase: m6A_site_841270
mod ID: M6ASITE089735 Click to Show/Hide the Full List
mod site chr9:128693699-128693700:+ [3]
Sequence AGGAAGAGGCAGCATGAGGAACCAGAGAGCTTCTTTACCTG
Motif Score 2.930744048
Cell/Tissue List HeLa; H1299; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000477806.5; ENST00000372692.8; ENST00000322030.12; ENST00000409104.7; ENST00000372686.5; ENST00000372688.8
External Link RMBase: m6A_site_841271
mod ID: M6ASITE089736 Click to Show/Hide the Full List
mod site chr9:128693788-128693789:+ [3]
Sequence CAAAGATGATATTTGGCCAAACCCATTACAGTACTACTTGG
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; HepG2; hNPCs; hESCs; fibroblasts; A549; LCLs; H1299; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000409104.7; ENST00000372688.8; ENST00000372686.5; ENST00000372692.8; ENST00000322030.12; ENST00000477806.5
External Link RMBase: m6A_site_841272
mod ID: M6ASITE089737 Click to Show/Hide the Full List
mod site chr9:128693795-128693796:+ [8]
Sequence GATATTTGGCCAAACCCATTACAGTACTACTTGGTGAGTTC
Motif Score 2.07285119
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000372688.8; ENST00000372686.5; ENST00000409104.7; ENST00000322030.12; ENST00000372692.8; ENST00000477806.5
External Link RMBase: m6A_site_841273
mod ID: M6ASITE089738 Click to Show/Hide the Full List
mod site chr9:128694669-128694670:+ [3]
Sequence GGAGAAGATGACTAAATAGAACACTGATGGATTCCAACCTT
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; hESC-HEK293T; hNPCs; hESCs; fibroblasts; A549; LCLs; H1299; MM6; Huh7; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000372686.5; ENST00000409104.7; ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841274
mod ID: M6ASITE089739 Click to Show/Hide the Full List
mod site chr9:128694802-128694803:+ [6]
Sequence TCTTGAGGTCTCTTTTCTCTACTCCATGGTTCTCAATTTAT
Motif Score 2.500660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8; ENST00000372686.5
External Link RMBase: m6A_site_841275
mod ID: M6ASITE089740 Click to Show/Hide the Full List
mod site chr9:128694849-128694850:+ [6]
Sequence GGAAATACCTTGAGCAGAATACAATGGGAAAAGAGTCTCTA
Motif Score 2.110482143
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000322030.12; ENST00000372686.5; ENST00000372692.8
External Link RMBase: m6A_site_841276
mod ID: M6ASITE089741 Click to Show/Hide the Full List
mod site chr9:128694912-128694913:+ [3]
Sequence TTTTATCCCTTCCTGTCTGAACAAAAACTGTATGGAATCAA
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T; LCLs; H1299
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841277
mod ID: M6ASITE089742 Click to Show/Hide the Full List
mod site chr9:128694918-128694919:+ [3]
Sequence CCCTTCCTGTCTGAACAAAAACTGTATGGAATCAACACCAC
Motif Score 2.627720238
Cell/Tissue List HeLa; LCLs; H1299
Seq Type List m6A-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841278
mod ID: M6ASITE089743 Click to Show/Hide the Full List
mod site chr9:128694932-128694933:+ [5]
Sequence ACAAAAACTGTATGGAATCAACACCACCGAGCTCTGTGGGA
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841279
mod ID: M6ASITE089744 Click to Show/Hide the Full List
mod site chr9:128694963-128694964:+ [3]
Sequence CTCTGTGGGAAAAAAGAAAAACCTGCTCCCTTCGCTCTGCT
Motif Score 2.185083333
Cell/Tissue List HeLa; LCLs; H1299
Seq Type List m6A-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841280
mod ID: M6ASITE089745 Click to Show/Hide the Full List
mod site chr9:128695072-128695073:+ [5]
Sequence GTATATTGGGCTCAGAGAGTACACTGTGTCTCTATGTGAAT
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841281
mod ID: M6ASITE089746 Click to Show/Hide the Full List
mod site chr9:128695114-128695115:+ [5]
Sequence TGGACAGTTAGCATTTACCAACATGTATCTGTCTACTTTCT
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841282
mod ID: M6ASITE089747 Click to Show/Hide the Full List
mod site chr9:128695158-128695159:+ [3]
Sequence GTTTAAAAAAAGAAAAAAAAACTTAAAAAAATGGGGTTATA
Motif Score 2.627720238
Cell/Tissue List HeLa; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000322030.12; rmsk_2886813; ENST00000372692.8
External Link RMBase: m6A_site_841283
mod ID: M6ASITE089748 Click to Show/Hide the Full List
mod site chr9:128695234-128695235:+ [5]
Sequence TGGGTTAAGTGGGCATTTTGACAACATGGCTTCTCCTTTGG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841284
mod ID: M6ASITE089749 Click to Show/Hide the Full List
mod site chr9:128695301-128695302:+ [5]
Sequence CATCCTTGCAGTTTAAGATGACACTTTTAAAATAAATTCTC
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841285
mod ID: M6ASITE089750 Click to Show/Hide the Full List
mod site chr9:128695303-128695304:+ [6]
Sequence TCCTTGCAGTTTAAGATGACACTTTTAAAATAAATTCTCTC
Motif Score 2.506922619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841286
mod ID: M6ASITE089751 Click to Show/Hide the Full List
mod site chr9:128695394-128695395:+ [5]
Sequence TAGGATCTTATTTGGAATTGACATTCTCTATTGTAATTTTG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841287
mod ID: M6ASITE089752 Click to Show/Hide the Full List
mod site chr9:128695492-128695493:+ [5]
Sequence GTTTTAAACGTTAAAAGTGTACAAGTTGCTTTGTTACAATA
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841288
mod ID: M6ASITE089753 Click to Show/Hide the Full List
mod site chr9:128695507-128695508:+ [6]
Sequence AGTGTACAAGTTGCTTTGTTACAATAAAACTAAATGTGTAC
Motif Score 2.07285119
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841289
mod ID: M6ASITE089754 Click to Show/Hide the Full List
mod site chr9:128695515-128695516:+ [3]
Sequence AGTTGCTTTGTTACAATAAAACTAAATGTGTACACAAAGGA
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841290
mod ID: M6ASITE089755 Click to Show/Hide the Full List
mod site chr9:128695526-128695527:+ [6]
Sequence TACAATAAAACTAAATGTGTACACAAAGGATTTGATGCTTT
Motif Score 2.856142857
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841291
mod ID: M6ASITE089756 Click to Show/Hide the Full List
mod site chr9:128695568-128695569:+ [6]
Sequence CTCTCAGCATAGGTATGCTTACTATGACCTTCCAAGTTTGA
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841292
mod ID: M6ASITE089757 Click to Show/Hide the Full List
mod site chr9:128695597-128695598:+ [8]
Sequence TTCCAAGTTTGACTTGTATAACATCACTGTCAAACTTTGTC
Motif Score 2.168095238
Cell/Tissue List kidney; liver; hESC-HEK293T
Seq Type List m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841293
mod ID: M6ASITE089758 Click to Show/Hide the Full List
mod site chr9:128695610-128695611:+ [3]
Sequence TTGTATAACATCACTGTCAAACTTTGTCACCCTAACTTCGT
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841294
mod ID: M6ASITE089759 Click to Show/Hide the Full List
mod site chr9:128695624-128695625:+ [6]
Sequence TGTCAAACTTTGTCACCCTAACTTCGTATTTTTTGATACGC
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841295
mod ID: M6ASITE089760 Click to Show/Hide the Full List
mod site chr9:128695645-128695646:+ [6]
Sequence CTTCGTATTTTTTGATACGCACTTTGCAGGATGACCTCAGG
Motif Score 3.252583333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841296
mod ID: M6ASITE089761 Click to Show/Hide the Full List
mod site chr9:128695763-128695764:+ [6]
Sequence ATTGGTTTCTGAAAGTATTCACATCATTTGGGATACCAGAT
Motif Score 2.047297619
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841297
mod ID: M6ASITE089762 Click to Show/Hide the Full List
mod site chr9:128695777-128695778:+ [6]
Sequence GTATTCACATCATTTGGGATACCAGATAGCTCAATACTCTC
Motif Score 2.089839286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841298
mod ID: M6ASITE089763 Click to Show/Hide the Full List
mod site chr9:128695803-128695804:+ [6]
Sequence TAGCTCAATACTCTCTGAGTACATTGTGCCCTTGATTTTTA
Motif Score 2.856142857
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841299
mod ID: M6ASITE089764 Click to Show/Hide the Full List
mod site chr9:128695900-128695901:+ [3]
Sequence CTGCCACCACCATCCAACAGACCTGGTGCTCTAATGCCAAG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841300
mod ID: M6ASITE089765 Click to Show/Hide the Full List
mod site chr9:128695932-128695933:+ [3]
Sequence AATGCCAAGTTATACACGGGACAGTTGCTGGCATGTCTTCA
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841301
mod ID: M6ASITE089766 Click to Show/Hide the Full List
mod site chr9:128696053-128696054:+ [6]
Sequence GTATAAAGCTCTCAAATGTGACCATGTGAATCTGGGTGGGA
Motif Score 2.839113095
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841302
mod ID: M6ASITE089767 Click to Show/Hide the Full List
mod site chr9:128696080-128696081:+ [3]
Sequence GAATCTGGGTGGGATAATGGACTCAGCTCTGTCTGCTCAAT
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841303
mod ID: M6ASITE089768 Click to Show/Hide the Full List
mod site chr9:128696199-128696200:+ [3]
Sequence TTTCAGAGGTGAATTAATGGACAGTCTGGTGAACTTCAAAA
Motif Score 3.643047619
Cell/Tissue List HeLa; brain; HEK293T
Seq Type List m6A-seq; m6A-REF-seq; DART-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841304
mod ID: M6ASITE089769 Click to Show/Hide the Full List
mod site chr9:128696211-128696212:+ [3]
Sequence ATTAATGGACAGTCTGGTGAACTTCAAAAGCTTTTTGATGT
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841305
mod ID: M6ASITE089770 Click to Show/Hide the Full List
mod site chr9:128696237-128696238:+ [3]
Sequence AAAGCTTTTTGATGTATAAAACTTGATAAATGGAACTATTC
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841306
mod ID: M6ASITE089771 Click to Show/Hide the Full List
mod site chr9:128696251-128696252:+ [3]
Sequence TATAAAACTTGATAAATGGAACTATTCCATCAATAGGCAAA
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841307
mod ID: M6ASITE089772 Click to Show/Hide the Full List
mod site chr9:128696278-128696279:+ [6]
Sequence CATCAATAGGCAAAAGTGTAACAACCTATCTAGATGGATAG
Motif Score 2.168095238
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841308
mod ID: M6ASITE089773 Click to Show/Hide the Full List
mod site chr9:128696334-128696335:+ [5]
Sequence CAGGTCTCTGTTTAGTAAATACATCACTGTATACCGATCAG
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000372692.8; ENST00000322030.12
External Link RMBase: m6A_site_841309
mod ID: M6ASITE089774 Click to Show/Hide the Full List
mod site chr9:128696376-128696377:+ [3]
Sequence AATCTTGCTCCAATAAAGGAACATAAAGATTTTTTTTGGAC
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000322030.12; ENST00000372692.8
External Link RMBase: m6A_site_841310
mod ID: M6ASITE089775 Click to Show/Hide the Full List
mod site chr9:128696395-128696396:+ [3]
Sequence AACATAAAGATTTTTTTTGGACTGGGGTCATTCTCCTTGTT
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000372692.8
External Link RMBase: m6A_site_841311