General Information of the Epigenetic Target (ID: EPITAR00373)
Target Name LIM and SH3 domain protein 1 (LASP1)
Synonyms
LASP-1; Metastatic lymph node gene 50 protein; MLN 50
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Gene Name LASP1
Sequence
MNPNCARCGKIVYPTEKVNCLDKFWHKACFHCETCKMTLNMKNYKGYEKKPYCNAHYPKQSFTMVADTPENLRLKQQSELQSQVRYKEEFEKNKGKGFSVVADTPELQRIKKTQDQISNIKYHEEFEKSRMGPSGGEGMEPERRDSQDGSSYRRPLEQQQPHHIPTSAPVYQQPQQQPVAQSYGGYKEPAAPVSIQRSAPGGGGKRYRAVYDYSAADEDEVSFQDGDTIVNVQQIDDGWMYGTVERTGDTGMLPANYVEAI
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Function
Plays an important role in the regulation of dynamic actin-based, cytoskeletal activities. Agonist-dependent changes in LASP1 phosphorylation may also serve to regulate actin-associated ion transport activities, not only in the parietal cell but also in certain other F-actin-rich secretory epithelial cell types (By similarity).
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Gene ID 3927
HGNC ID HGNC:6513
Ensembl Gene ID ENSG00000002834
KEGG ID hsa:3927
Chromosomal Location 17q12
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00373)
LIM and SH3 domain protein 1 (LASP1)
Adenosine-to-Inosine editing (A-to-I)
In total 14 m6A sequence/site(s) in this target gene
mod ID: A2ISITE007962 Click to Show/Hide the Full List
mod site chr17:38881376-38881377:+ [1]
Sequence GCCTCCACCTCCTGGGTTTAAGTGATCCTCCTGCCTCAGCC
Transcript ID List ENST00000433206.6; ENST00000584106.1; ENST00000435347.7; ENST00000419929.1; ENST00000318008.11; ENST00000585841.5; ENST00000443937.7
External Link RMBase: RNA-editing_site_57177
mod ID: A2ISITE007963 Click to Show/Hide the Full List
mod site chr17:38881485-38881486:+ [1]
Sequence CTTGTCATACTCTTGGCCTCAGGTGATCTACCTGCTTTAGC
Transcript ID List ENST00000443937.7; ENST00000433206.6; ENST00000318008.11; ENST00000419929.1; ENST00000435347.7; ENST00000585841.5; ENST00000584106.1
External Link RMBase: RNA-editing_site_57178
mod ID: A2ISITE007964 Click to Show/Hide the Full List
mod site chr17:38893357-38893358:+ [1]
Sequence GCAGCTCTGGGTGAGGCCCAAGAATCTGCATTTTGACTCCC
Transcript ID List ENST00000419929.1; ENST00000435347.7; ENST00000318008.11; ENST00000584106.1; ENST00000433206.6; ENST00000585841.5; rmsk_4687068; ENST00000581485.1; ENST00000443937.7
External Link RMBase: RNA-editing_site_57179
mod ID: A2ISITE007965 Click to Show/Hide the Full List
mod site chr17:38896262-38896263:+ [1]
Sequence TCAGGGTCTGAAGGTGCTTTAAAATGGTCACAGACTCCAAA
Transcript ID List ENST00000585841.5; ENST00000318008.11; ENST00000419929.1; ENST00000433206.6; ENST00000443937.7; ENST00000584106.1; ENST00000581485.1; ENST00000435347.7
External Link RMBase: RNA-editing_site_57180
mod ID: A2ISITE007966 Click to Show/Hide the Full List
mod site chr17:38899824-38899825:+ [2]
Sequence TGCTCCGCCTCCAGGGTTCAAGTGATTCTCCTGCCTTAGCC
Transcript ID List ENST00000443937.7; ENST00000581485.1; ENST00000435347.7; ENST00000585841.5; ENST00000419929.1; ENST00000433206.6; ENST00000318008.11
External Link RMBase: RNA-editing_site_57181
mod ID: A2ISITE007967 Click to Show/Hide the Full List
mod site chr17:38900046-38900047:+ [1]
Sequence GCCACATTCAGATCTTTTCTAAAGATGCTGGTTGCAGGCCC
Transcript ID List ENST00000443937.7; ENST00000433206.6; ENST00000585841.5; ENST00000435347.7; ENST00000581485.1; ENST00000318008.11; ENST00000419929.1
External Link RMBase: RNA-editing_site_57182
mod ID: A2ISITE007968 Click to Show/Hide the Full List
mod site chr17:38909314-38909315:+ [1]
Sequence CACCAGTTTCCTCTCTGGAAAGTGAAGAGGAGGCTGGGCAC
Transcript ID List ENST00000443937.7; ENST00000585841.5; ENST00000318008.11; ENST00000581485.1; ENST00000419929.1; ENST00000435347.7; ENST00000433206.6
External Link RMBase: RNA-editing_site_57183
mod ID: A2ISITE007969 Click to Show/Hide the Full List
mod site chr17:38909847-38909848:+ [1]
Sequence ATCTCCGTCTCCTGGGTTCAAGTGATTCTCATGACTCGGCT
Transcript ID List ENST00000443937.7; ENST00000318008.11; ENST00000433206.6; ENST00000435347.7; ENST00000585841.5; ENST00000419929.1; ENST00000581485.1
External Link RMBase: RNA-editing_site_57184
mod ID: A2ISITE007970 Click to Show/Hide the Full List
mod site chr17:38912928-38912929:+ [1]
Sequence TCCTCTGGCTGACCCTGCTTAGGTCTCTGATGGAGGTAGCA
Transcript ID List ENST00000585841.5; ENST00000443937.7; ENST00000318008.11; ENST00000435347.7; ENST00000581485.1; ENST00000419929.1; ENST00000433206.6
External Link RMBase: RNA-editing_site_57185
mod ID: A2ISITE007971 Click to Show/Hide the Full List
mod site chr17:38915720-38915721:+ [1]
Sequence TCTGAGCCAGGCCTAGAGCAAGTGAATAAGCCCAGCAGGAA
Transcript ID List ENST00000433206.6; ENST00000579123.1; ENST00000435347.7; ENST00000443937.7; ENST00000585841.5; ENST00000318008.11
External Link RMBase: RNA-editing_site_57186
mod ID: A2ISITE007972 Click to Show/Hide the Full List
mod site chr17:38916705-38916706:+ [1]
Sequence ACCCTGTCTCTACTAAAAATATAAAATTAGCTCGGCATGGT
Transcript ID List ENST00000318008.11; rmsk_4687122; ENST00000579123.1; ENST00000443937.7; ENST00000585841.5; ENST00000433206.6; ENST00000435347.7
External Link RMBase: RNA-editing_site_57187
mod ID: A2ISITE007973 Click to Show/Hide the Full List
mod site chr17:38918213-38918214:+ [1]
Sequence ATTTCAAACTTCTGGGCTCAAGCAGTTCTCCTGCCTTGGCC
Transcript ID List ENST00000318008.11; ENST00000585841.5; ENST00000443937.7; ENST00000433206.6; ENST00000435347.7
External Link RMBase: RNA-editing_site_57188
mod ID: A2ISITE007974 Click to Show/Hide the Full List
mod site chr17:38918301-38918302:+ [1]
Sequence ATGTCGTATTTTTAGACATTACTCTGTCATCATGGCTGGTG
Transcript ID List ENST00000318008.11; ENST00000443937.7; ENST00000433206.6; ENST00000585841.5; ENST00000435347.7
External Link RMBase: RNA-editing_site_57189
mod ID: A2ISITE007975 Click to Show/Hide the Full List
mod site chr17:38919642-38919643:+ [2]
Sequence GTGTAGGGCAAGGGTGCCTCAGGACCTTTTGGTCTTCAGCC
Transcript ID List ENST00000435347.7; ENST00000318008.11; ENST00000433206.6
External Link RMBase: RNA-editing_site_57190
5-methylcytidine (m5C)
In total 2 m6A sequence/site(s) in this target gene
mod ID: M5CSITE001095 Click to Show/Hide the Full List
mod site chr17:38918841-38918842:+ [3]
Sequence GCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000435347.7; ENST00000585841.5; ENST00000318008.11; ENST00000443937.7; ENST00000433206.6
External Link RMBase: m5C_site_18735
mod ID: M5CSITE001096 Click to Show/Hide the Full List
mod site chr17:38921042-38921043:+ [3]
Sequence CAGGCCCTCCCTCTACTCTTCCTGTCCTAAAAATAGGGGCC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000435347.7; ENST00000318008.11; ENST00000433206.6
External Link RMBase: m5C_site_18736
N6-methyladenosine (m6A)
In total 73 m6A sequence/site(s) in this target gene
mod ID: M6ASITE032104 Click to Show/Hide the Full List
mod site chr17:38870139-38870140:+ [4]
Sequence CCGCCAGCTCGCCTCGGGGAACAGGACGCGCGTGAGCTCAG
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; A549; fibroblasts; LCLs; MM6; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000433206.6; ENST00000443937.7; ENST00000584106.1; ENST00000585841.5; ENST00000318008.11
External Link RMBase: m6A_site_360047
mod ID: M6ASITE032105 Click to Show/Hide the Full List
mod site chr17:38870186-38870187:+ [4]
Sequence CCGCCCCAGCTTTTCTCGGAACCATGAACCCCAACTGCGCC
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; A549; MM6; CD4T; peripheral-blood; GSC-11; HEK293T; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000318008.11; ENST00000433206.6; ENST00000584106.1; ENST00000443937.7; ENST00000585841.5; ENST00000435347.7
External Link RMBase: m6A_site_360048
mod ID: M6ASITE032106 Click to Show/Hide the Full List
mod site chr17:38870193-38870194:+ [4]
Sequence AGCTTTTCTCGGAACCATGAACCCCAACTGCGCCCGGTGCG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; A549; MM6; CD4T; peripheral-blood; GSC-11; HEK293T; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000585841.5; ENST00000318008.11; ENST00000435347.7; ENST00000443937.7; ENST00000584106.1; ENST00000433206.6
External Link RMBase: m6A_site_360049
mod ID: M6ASITE032107 Click to Show/Hide the Full List
mod site chr17:38870244-38870245:+ [4]
Sequence GTATCCCACGGAGAAGGTGAACTGTCTGGATAAGGTGAGCC
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; A549; MM6; CD4T; peripheral-blood; GSC-11; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000585841.5; ENST00000433206.6; ENST00000435347.7; ENST00000318008.11; ENST00000443937.7; ENST00000584106.1
External Link RMBase: m6A_site_360050
mod ID: M6ASITE032108 Click to Show/Hide the Full List
mod site chr17:38873955-38873956:+ [4]
Sequence CAACCCAGAGCCACAGAGGGACAGGCTGTCCCAAGTGAGGG
Motif Score 3.643047619
Cell/Tissue List HeLa; MM6; iSLK; MSC; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000443937.7; ENST00000584106.1; ENST00000318008.11; ENST00000435347.7; ENST00000433206.6; ENST00000419929.1; ENST00000585841.5
External Link RMBase: m6A_site_360051
mod ID: M6ASITE032109 Click to Show/Hide the Full List
mod site chr17:38878115-38878116:+ [4]
Sequence AAGCATGCTTCCATTGCGAGACCTGCAAGATGACACTGAAC
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000443937.7; ENST00000435347.7; ENST00000585841.5; ENST00000419929.1; ENST00000318008.11; ENST00000584106.1; ENST00000433206.6
External Link RMBase: m6A_site_360052
mod ID: M6ASITE032110 Click to Show/Hide the Full List
mod site chr17:38878127-38878128:+ [5]
Sequence ATTGCGAGACCTGCAAGATGACACTGAACATGAAGAACTAC
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000443937.7; ENST00000419929.1; ENST00000435347.7; ENST00000585841.5; ENST00000584106.1; ENST00000433206.6; ENST00000318008.11
External Link RMBase: m6A_site_360053
mod ID: M6ASITE032111 Click to Show/Hide the Full List
mod site chr17:38878134-38878135:+ [4]
Sequence GACCTGCAAGATGACACTGAACATGAAGAACTACAAGGGCT
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000419929.1; ENST00000435347.7; ENST00000443937.7; ENST00000433206.6; ENST00000585841.5; ENST00000318008.11; ENST00000584106.1
External Link RMBase: m6A_site_360054
mod ID: M6ASITE032112 Click to Show/Hide the Full List
mod site chr17:38878143-38878144:+ [4]
Sequence GATGACACTGAACATGAAGAACTACAAGGGCTACGAGAAGA
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; HepG2; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000435347.7; ENST00000585841.5; ENST00000584106.1; ENST00000433206.6; ENST00000318008.11; ENST00000419929.1; ENST00000443937.7
External Link RMBase: m6A_site_360055
mod ID: M6ASITE032113 Click to Show/Hide the Full List
mod site chr17:38890277-38890278:+ [4]
Sequence CCCCTCGGCCTTGGTGGTGGACACTGAAGTCCTCCTGTGGG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000419929.1; ENST00000435347.7; ENST00000584106.1; ENST00000433206.6; ENST00000443937.7; ENST00000318008.11; ENST00000581485.1; ENST00000585841.5
External Link RMBase: m6A_site_360056
mod ID: M6ASITE032114 Click to Show/Hide the Full List
mod site chr17:38890419-38890420:+ [4]
Sequence CTGTTTTTTCTGTCCTGCAGACACTACCCCAAGCAGTCCTT
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000581485.1; ENST00000585841.5; ENST00000443937.7; ENST00000435347.7; ENST00000419929.1; ENST00000584106.1; ENST00000433206.6; ENST00000318008.11
External Link RMBase: m6A_site_360057
mod ID: M6ASITE032115 Click to Show/Hide the Full List
mod site chr17:38890454-38890455:+ [4]
Sequence GTCCTTCACCATGGTGGCGGACACCCCGGAAAACCTTCGCC
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000318008.11; ENST00000443937.7; ENST00000433206.6; ENST00000585841.5; ENST00000584106.1; ENST00000435347.7; ENST00000419929.1; ENST00000581485.1
External Link RMBase: m6A_site_360058
mod ID: M6ASITE032116 Click to Show/Hide the Full List
mod site chr17:38890466-38890467:+ [4]
Sequence GGTGGCGGACACCCCGGAAAACCTTCGCCTCAAGCAACAGA
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HepG2; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000419929.1; ENST00000585841.5; ENST00000443937.7; ENST00000581485.1; ENST00000433206.6; ENST00000435347.7; ENST00000318008.11; ENST00000584106.1
External Link RMBase: m6A_site_360059
mod ID: M6ASITE032117 Click to Show/Hide the Full List
mod site chr17:38896909-38896910:+ [4]
Sequence ACTCTTTTACAGATGAAGAAACCGAGGCCAGGGGCTTGAGA
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HepG2; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000585841.5; ENST00000584106.1; ENST00000318008.11; ENST00000433206.6; ENST00000581485.1; ENST00000435347.7; ENST00000419929.1; ENST00000443937.7
External Link RMBase: m6A_site_360060
mod ID: M6ASITE032118 Click to Show/Hide the Full List
mod site chr17:38897049-38897050:+ [4]
Sequence GCTGGCCCAGGGCTTCCAGGACTGAGGAAGAGCTGGTGCTA
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; MT4; H1299; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000584106.1; ENST00000585841.5; ENST00000443937.7; ENST00000318008.11; ENST00000435347.7; ENST00000581485.1; ENST00000433206.6; ENST00000419929.1
External Link RMBase: m6A_site_360061
mod ID: M6ASITE032119 Click to Show/Hide the Full List
mod site chr17:38898439-38898440:+ [4]
Sequence CAAGGAGGAGTTTGAGAAGAACAAGGGCAAAGGTTTCAGCG
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; fibroblasts; MT4; A549; H1299; MM6; Huh7; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000581485.1; ENST00000584106.1; ENST00000435347.7; ENST00000585841.5; ENST00000419929.1; ENST00000443937.7; ENST00000433206.6; ENST00000318008.11
External Link RMBase: m6A_site_360062
mod ID: M6ASITE032120 Click to Show/Hide the Full List
mod site chr17:38898469-38898470:+ [4]
Sequence AGGTTTCAGCGTAGTGGCAGACACGCCCGAGCTCCAGAGAA
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; hESC-HEK293T; HepG2; fibroblasts; MT4; A549; H1299; MM6; Huh7; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000433206.6; ENST00000443937.7; ENST00000584106.1; ENST00000318008.11; ENST00000419929.1; ENST00000435347.7; ENST00000581485.1; ENST00000585841.5
External Link RMBase: m6A_site_360063
mod ID: M6ASITE032121 Click to Show/Hide the Full List
mod site chr17:38898498-38898499:+ [4]
Sequence AGCTCCAGAGAATCAAGAAGACCCAGGACCAGATCAGTAAC
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HepG2; fibroblasts; MT4; A549; H1299; MM6; Huh7; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000419929.1; ENST00000435347.7; ENST00000585841.5; ENST00000581485.1; ENST00000584106.1; ENST00000318008.11; ENST00000443937.7; ENST00000433206.6
External Link RMBase: m6A_site_360064
mod ID: M6ASITE032122 Click to Show/Hide the Full List
mod site chr17:38898505-38898506:+ [4]
Sequence GAGAATCAAGAAGACCCAGGACCAGATCAGTAACGTGAGCT
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; fibroblasts; MT4; A549; H1299; MM6; Huh7; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000419929.1; ENST00000581485.1; ENST00000435347.7; ENST00000585841.5; ENST00000584106.1; ENST00000318008.11; ENST00000433206.6; ENST00000443937.7
External Link RMBase: m6A_site_360065
mod ID: M6ASITE032123 Click to Show/Hide the Full List
mod site chr17:38898517-38898518:+ [5]
Sequence GACCCAGGACCAGATCAGTAACGTGAGCTCTTGCCCTGCCC
Motif Score 2.142029762
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000585841.5; ENST00000443937.7; ENST00000318008.11; ENST00000435347.7; ENST00000581485.1; ENST00000433206.6; ENST00000419929.1; ENST00000584106.1
External Link RMBase: m6A_site_360066
mod ID: M6ASITE032124 Click to Show/Hide the Full List
mod site chr17:38898737-38898738:+ [4]
Sequence AGCATTTTCTTCTTGAAGGGACTGTATTCTGTGGGGGCCTG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000584106.1; ENST00000585841.5; ENST00000443937.7; ENST00000581485.1; ENST00000435347.7; ENST00000419929.1; ENST00000318008.11; ENST00000433206.6
External Link RMBase: m6A_site_360067
mod ID: M6ASITE032125 Click to Show/Hide the Full List
mod site chr17:38914454-38914455:+ [5]
Sequence GGAGCAGCAGCAGCCTCACCACATCCCGACCAGTGCCCCGG
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000435347.7; ENST00000585841.5; ENST00000581485.1; ENST00000579123.1; ENST00000318008.11; ENST00000443937.7; ENST00000419929.1; ENST00000433206.6
External Link RMBase: m6A_site_360068
mod ID: M6ASITE032126 Click to Show/Hide the Full List
mod site chr17:38915090-38915091:+ [5]
Sequence GGCCCAGTCCTATGGTGGCTACAAGGAGCCTGCAGCCCCAG
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000318008.11; ENST00000433206.6; ENST00000585841.5; ENST00000579123.1; ENST00000435347.7; ENST00000581485.1; ENST00000419929.1; ENST00000443937.7
External Link RMBase: m6A_site_360069
mod ID: M6ASITE032127 Click to Show/Hide the Full List
mod site chr17:38915206-38915207:+ [4]
Sequence GGTCCTTCGGGAAGGCTTGGACACAGCTCATGGATTCTCCT
Motif Score 3.643047619
Cell/Tissue List HeLa; MM6; peripheral-blood; TREX; MSC; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000579123.1; ENST00000435347.7; ENST00000585841.5; ENST00000318008.11; ENST00000443937.7; ENST00000433206.6
External Link RMBase: m6A_site_360070
mod ID: M6ASITE032128 Click to Show/Hide the Full List
mod site chr17:38916781-38916782:+ [4]
Sequence GAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCA
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000435347.7; ENST00000443937.7; ENST00000585841.5; ENST00000318008.11; ENST00000433206.6; rmsk_4687122; ENST00000579123.1
External Link RMBase: m6A_site_360071
mod ID: M6ASITE032129 Click to Show/Hide the Full List
mod site chr17:38918629-38918630:+ [6]
Sequence GTACCGCGCGGTGTATGACTACAGCGCCGCCGACGAGGACG
Motif Score 2.078666667
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000318008.11; ENST00000585841.5; ENST00000435347.7; ENST00000433206.6; ENST00000443937.7
External Link RMBase: m6A_site_360072
mod ID: M6ASITE032130 Click to Show/Hide the Full List
mod site chr17:38918671-38918672:+ [4]
Sequence GGTCTCCTTCCAGGACGGGGACACCATCGTCAACGTGCAGC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; hESC-HEK293T; MM6; peripheral-blood; MSC; TIME; iSLK; endometrial; HEC-1-A
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000443937.7; ENST00000318008.11; ENST00000433206.6; ENST00000435347.7; ENST00000585841.5
External Link RMBase: m6A_site_360073
mod ID: M6ASITE032131 Click to Show/Hide the Full List
mod site chr17:38918737-38918738:+ [5]
Sequence GACGGTGGAGCGCACCGGCGACACGGGGATGCTGCCGGCCA
Motif Score 2.865571429
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000433206.6; ENST00000318008.11; ENST00000435347.7; ENST00000585841.5; ENST00000443937.7
External Link RMBase: m6A_site_360074
mod ID: M6ASITE032132 Click to Show/Hide the Full List
mod site chr17:38918778-38918779:+ [4]
Sequence ACTACGTGGAGGCCATCTGAACCCGCAGCGCCCCCATCTGT
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; MM6; peripheral-blood; MSC; iSLK; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000435347.7; ENST00000585841.5; ENST00000433206.6; ENST00000318008.11; ENST00000443937.7
External Link RMBase: m6A_site_360075
mod ID: M6ASITE032133 Click to Show/Hide the Full List
mod site chr17:38918806-38918807:+ [5]
Sequence CGCCCCCATCTGTCTTCAGCACATTCCACGGCATCGCATCC
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000443937.7; ENST00000435347.7; ENST00000433206.6; ENST00000318008.11; ENST00000585841.5
External Link RMBase: m6A_site_360076
mod ID: M6ASITE032134 Click to Show/Hide the Full List
mod site chr17:38918873-38918874:+ [4]
Sequence CAGTGTCTCTGTTTTTTAAAACCTGCGACAGCTTGTGATTC
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; Huh7; peripheral-blood; MSC; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000585841.5; ENST00000443937.7; ENST00000318008.11
External Link RMBase: m6A_site_360079
mod ID: M6ASITE032135 Click to Show/Hide the Full List
mod site chr17:38919052-38919053:+ [4]
Sequence AGGCAGGGCTGGAATGGGAGACCTGTTGGCCTGTGGGCCTC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; Huh7; MSC; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000435347.7; ENST00000585841.5; ENST00000318008.11; ENST00000443937.7; ENST00000433206.6
External Link RMBase: m6A_site_360081
mod ID: M6ASITE032136 Click to Show/Hide the Full List
mod site chr17:38919120-38919121:+ [6]
Sequence ATCCTCCTGCCCAGCTCCTCACATACCCACACATTCCAGGG
Motif Score 2.047297619
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000443937.7; ENST00000318008.11; ENST00000435347.7; ENST00000433206.6; ENST00000585841.5
External Link RMBase: m6A_site_360082
mod ID: M6ASITE032137 Click to Show/Hide the Full List
mod site chr17:38919164-38919165:+ [4]
Sequence GGGTGAGCCTGACTGCCAGGACCCCAGGTCAGGGGCTCCCT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; Huh7; peripheral-blood; MSC; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000443937.7; ENST00000435347.7; ENST00000585841.5; ENST00000318008.11; ENST00000433206.6
External Link RMBase: m6A_site_360083
mod ID: M6ASITE032138 Click to Show/Hide the Full List
mod site chr17:38919185-38919186:+ [5]
Sequence CCCCAGGTCAGGGGCTCCCTACATTCCCCAGAGTGGGATCC
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000585841.5; ENST00000433206.6; ENST00000318008.11; ENST00000435347.7
External Link RMBase: m6A_site_360084
mod ID: M6ASITE032139 Click to Show/Hide the Full List
mod site chr17:38919235-38919236:+ [4]
Sequence TTCCTGGGATGGCGATGGGGACTCTGCCGCTGTGTAGGGAC
Motif Score 4.065041667
Cell/Tissue List HeLa; A549; HEC-1-A
Seq Type List m6A-seq
Transcript ID List ENST00000318008.11; ENST00000585841.5; ENST00000433206.6; ENST00000435347.7
External Link RMBase: m6A_site_360085
mod ID: M6ASITE032140 Click to Show/Hide the Full List
mod site chr17:38919254-38919255:+ [4]
Sequence GACTCTGCCGCTGTGTAGGGACCAGTGGGATGGGCTCTACC
Motif Score 3.622404762
Cell/Tissue List HeLa; A549; HEC-1-A
Seq Type List m6A-seq
Transcript ID List ENST00000433206.6; ENST00000585841.5; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360086
mod ID: M6ASITE032141 Click to Show/Hide the Full List
mod site chr17:38919404-38919405:+ [5]
Sequence CTCCCCGCGCGTTCCTTCGCACACTGTGATTTTGCCCTCCT
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360087
mod ID: M6ASITE032142 Click to Show/Hide the Full List
mod site chr17:38919435-38919436:+ [4]
Sequence TTGCCCTCCTGCCCACGCAGACCTGCAGCGGGCAAAGAGCT
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000318008.11; ENST00000435347.7; ENST00000433206.6
External Link RMBase: m6A_site_360088
mod ID: M6ASITE032143 Click to Show/Hide the Full List
mod site chr17:38919467-38919468:+ [6]
Sequence CAAAGAGCTCCCGAGGAAGCACAGCTTGGGTCAGGTTCTTG
Motif Score 2.830589286
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360089
mod ID: M6ASITE032144 Click to Show/Hide the Full List
mod site chr17:38919506-38919507:+ [4]
Sequence TGCCTTTCTTAATTTTAGGGACAGCTACCGGAAGGAGGGGA
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293; MT4; Huh7
Seq Type List m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List ENST00000433206.6; ENST00000318008.11; ENST00000435347.7
External Link RMBase: m6A_site_360090
mod ID: M6ASITE032145 Click to Show/Hide the Full List
mod site chr17:38919527-38919528:+ [4]
Sequence CAGCTACCGGAAGGAGGGGAACAAGGAGTTCTCTTCCGCAG
Motif Score 2.951386905
Cell/Tissue List HeLa; MT4; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000435347.7; ENST00000433206.6; ENST00000318008.11
External Link RMBase: m6A_site_360091
mod ID: M6ASITE032146 Click to Show/Hide the Full List
mod site chr17:38919582-38919583:+ [4]
Sequence CCCACCCCCAGTCTCCAGGGACCCTTGCCTGCCTCCTAGGC
Motif Score 3.622404762
Cell/Tissue List HeLa; MT4; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000318008.11; ENST00000433206.6; ENST00000435347.7
External Link RMBase: m6A_site_360092
mod ID: M6ASITE032147 Click to Show/Hide the Full List
mod site chr17:38919645-38919646:+ [4]
Sequence TAGGGCAAGGGTGCCTCAGGACCTTTTGGTCTTCAGCCTCC
Motif Score 3.622404762
Cell/Tissue List HeLa; MT4; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360093
mod ID: M6ASITE032148 Click to Show/Hide the Full List
mod site chr17:38919771-38919772:+ [7]
Sequence CCCAGCCCAATGCCAAGTGGACTTGGAGCTGCACAAAGTCA
Motif Score 4.065041667
Cell/Tissue List HepG2; HEK293T; peripheral-blood; endometrial; HEC-1-A
Seq Type List m6A-seq
Transcript ID List ENST00000435347.7; ENST00000433206.6; ENST00000318008.11
External Link RMBase: m6A_site_360094
mod ID: M6ASITE032149 Click to Show/Hide the Full List
mod site chr17:38919783-38919784:+ [5]
Sequence CCAAGTGGACTTGGAGCTGCACAAAGTCAGCAGGGACCACT
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000435347.7; ENST00000318008.11; ENST00000433206.6
External Link RMBase: m6A_site_360095
mod ID: M6ASITE032150 Click to Show/Hide the Full List
mod site chr17:38919798-38919799:+ [7]
Sequence GCTGCACAAAGTCAGCAGGGACCACTAAATCTCCAAGACCT
Motif Score 3.622404762
Cell/Tissue List HEK293T; HepG2; peripheral-blood; endometrial; HEC-1-A
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000318008.11; ENST00000433206.6; ENST00000435347.7
External Link RMBase: m6A_site_360096
mod ID: M6ASITE032151 Click to Show/Hide the Full List
mod site chr17:38919815-38919816:+ [7]
Sequence GGGACCACTAAATCTCCAAGACCTGGTGTGCGGAGGCAGGA
Motif Score 2.876744048
Cell/Tissue List HEK293T; HepG2; peripheral-blood; endometrial; HEC-1-A
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000435347.7; ENST00000433206.6; ENST00000318008.11
External Link RMBase: m6A_site_360097
mod ID: M6ASITE032152 Click to Show/Hide the Full List
mod site chr17:38919859-38919860:+ [5]
Sequence TGTATGTCTGCAGGTGTCTGACACGCAAGTGTGTGAGTGTG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360098
mod ID: M6ASITE032153 Click to Show/Hide the Full List
mod site chr17:38919988-38919989:+ [4]
Sequence CCCCTGAGAGTTTCCTCAGAACCCACAGTGAGAGGGGAGGG
Motif Score 2.930744048
Cell/Tissue List HeLa; MT4; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360099
mod ID: M6ASITE032154 Click to Show/Hide the Full List
mod site chr17:38920237-38920238:+ [6]
Sequence CCCCATCTCTGTCTGGGGCTACAGAATAGGGTGGCAGAAGT
Motif Score 2.078666667
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360100
mod ID: M6ASITE032155 Click to Show/Hide the Full List
mod site chr17:38920298-38920299:+ [4]
Sequence CTCGGGGGCTCTTCCCCTAGACCTCCCCCTCACTTACATAA
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000433206.6; ENST00000318008.11; ENST00000435347.7
External Link RMBase: m6A_site_360101
mod ID: M6ASITE032156 Click to Show/Hide the Full List
mod site chr17:38920313-38920314:+ [5]
Sequence CCTAGACCTCCCCCTCACTTACATAAAGCTCCCTTGAAGCA
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000318008.11; ENST00000435347.7; ENST00000433206.6
External Link RMBase: m6A_site_360102
mod ID: M6ASITE032157 Click to Show/Hide the Full List
mod site chr17:38920359-38920360:+ [4]
Sequence GAGGGTCCCAGGGCTGCAAAACTGGAAGCACAGCCTCGGGG
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000318008.11; ENST00000433206.6; ENST00000435347.7
External Link RMBase: m6A_site_360103
mod ID: M6ASITE032158 Click to Show/Hide the Full List
mod site chr17:38920439-38920440:+ [5]
Sequence TCTGCTCATGGGTGGCTGTGACAACCCTGGCCTCACTTGAT
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000433206.6; ENST00000318008.11; ENST00000435347.7
External Link RMBase: m6A_site_360104
mod ID: M6ASITE032159 Click to Show/Hide the Full List
mod site chr17:38920554-38920555:+ [5]
Sequence TTGGCCTCTTGTCCCTTGGCACACTTGTACCCACAGGTGAG
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000435347.7; ENST00000318008.11; ENST00000433206.6
External Link RMBase: m6A_site_360105
mod ID: M6ASITE032160 Click to Show/Hide the Full List
mod site chr17:38920582-38920583:+ [4]
Sequence ACCCACAGGTGAGGGGCAGGACCTGAAGGTATTGGCCTGTT
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360106
mod ID: M6ASITE032161 Click to Show/Hide the Full List
mod site chr17:38920878-38920879:+ [8]
Sequence AGCACAATGTGGATTTGGGGACCAAAGGTCAGGGACACATC
Motif Score 3.622404762
Cell/Tissue List HEC-1-A
Seq Type List m6A-seq
Transcript ID List ENST00000318008.11; ENST00000433206.6; ENST00000435347.7
External Link RMBase: m6A_site_360107
mod ID: M6ASITE032162 Click to Show/Hide the Full List
mod site chr17:38920892-38920893:+ [8]
Sequence TTGGGGACCAAAGGTCAGGGACACATCCCCTTAGAGGACCT
Motif Score 3.643047619
Cell/Tissue List HEC-1-A
Seq Type List m6A-seq
Transcript ID List ENST00000318008.11; ENST00000433206.6; ENST00000435347.7
External Link RMBase: m6A_site_360108
mod ID: M6ASITE032163 Click to Show/Hide the Full List
mod site chr17:38920909-38920910:+ [4]
Sequence GGGACACATCCCCTTAGAGGACCTGAGTTTGGGAGAGTGGT
Motif Score 3.622404762
Cell/Tissue List HeLa; HEC-1-A
Seq Type List m6A-seq
Transcript ID List ENST00000318008.11; ENST00000435347.7; ENST00000433206.6
External Link RMBase: m6A_site_360109
mod ID: M6ASITE032164 Click to Show/Hide the Full List
mod site chr17:38921071-38921072:+ [5]
Sequence AAAATAGGGGCCGTTTTCTTACACACCCCCAGAGAGAGGAG
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000318008.11; ENST00000435347.7; ENST00000433206.6
External Link RMBase: m6A_site_360110
mod ID: M6ASITE032165 Click to Show/Hide the Full List
mod site chr17:38921094-38921095:+ [8]
Sequence CACCCCCAGAGAGAGGAGGGACTGTCACACTGGTGCTGAGT
Motif Score 4.065041667
Cell/Tissue List HEC-1-A
Seq Type List m6A-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360111
mod ID: M6ASITE032166 Click to Show/Hide the Full List
mod site chr17:38921100-38921101:+ [5]
Sequence CAGAGAGAGGAGGGACTGTCACACTGGTGCTGAGTGACCGG
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000435347.7; ENST00000318008.11; ENST00000433206.6
External Link RMBase: m6A_site_360112
mod ID: M6ASITE032167 Click to Show/Hide the Full List
mod site chr17:38921116-38921117:+ [9]
Sequence TGTCACACTGGTGCTGAGTGACCGGGGGCTGCTGGGCGTCT
Motif Score 2.839113095
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360113
mod ID: M6ASITE032168 Click to Show/Hide the Full List
mod site chr17:38921317-38921318:+ [5]
Sequence GTGGACCAATACTAAGAATAACAAGAAGCCCAGTGGTGAGG
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360114
mod ID: M6ASITE032169 Click to Show/Hide the Full List
mod site chr17:38921433-38921434:+ [5]
Sequence ATTTCTGCCTTTCCCCCCTCACACATGCACTTTTGGGCCTT
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000435347.7; ENST00000433206.6; ENST00000318008.11
External Link RMBase: m6A_site_360115
mod ID: M6ASITE032170 Click to Show/Hide the Full List
mod site chr17:38921472-38921473:+ [4]
Sequence TTTTTTTATAGCTGGAAAAAACAAAATACCACCCTACAAAC
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000433206.6; ENST00000318008.11; ENST00000435347.7
External Link RMBase: m6A_site_360116
mod ID: M6ASITE032171 Click to Show/Hide the Full List
mod site chr17:38921491-38921492:+ [4]
Sequence AACAAAATACCACCCTACAAACCTGTATTTAAAAAGAAACA
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000433206.6; ENST00000318008.11; ENST00000435347.7
External Link RMBase: m6A_site_360117
mod ID: M6ASITE032172 Click to Show/Hide the Full List
mod site chr17:38921509-38921510:+ [4]
Sequence AAACCTGTATTTAAAAAGAAACAGAAATGACCACGTGAAAT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000435347.7; ENST00000318008.11; ENST00000433206.6
External Link RMBase: m6A_site_360118
mod ID: M6ASITE032173 Click to Show/Hide the Full List
mod site chr17:38921544-38921545:+ [4]
Sequence TGAAATTTGCCTCTGTCCAAACATTTCATCCGTGTGTATGT
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000435347.7; ENST00000433206.6; ENST00000318008.11
External Link RMBase: m6A_site_360120
mod ID: M6ASITE032174 Click to Show/Hide the Full List
mod site chr17:38921673-38921674:+ [4]
Sequence GGGCTTGTGCTCGGGATCAAACCTTTCTGGCCTGTTATGAT
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360122
mod ID: M6ASITE032175 Click to Show/Hide the Full List
mod site chr17:38921699-38921700:+ [4]
Sequence CTGGCCTGTTATGATTCTGAACATTTGACTTGAACCACAAG
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000318008.11; ENST00000433206.6; ENST00000435347.7
External Link RMBase: m6A_site_360123
mod ID: M6ASITE032176 Click to Show/Hide the Full List
mod site chr17:38921712-38921713:+ [4]
Sequence ATTCTGAACATTTGACTTGAACCACAAGTGAATCTTTCTCC
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000433206.6; ENST00000435347.7; ENST00000318008.11
External Link RMBase: m6A_site_360124