Epigenetic Target Information
General Information of the Epigenetic Target (ID: EPITAR00364)
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00364)
| In total 6 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE003911 | Click to Show/Hide the Full List | ||
| mod site | chrX:130137044-130137045:- | [1] | |
| Sequence | TTTCTATATGCTGCCACTCTATTTCCTTTGAGTGTGACCTA | ||
| Transcript ID List | ENST00000527892.5; ENST00000319908.7; ENST00000533719.1; ENST00000346424.6; ENST00000535724.5; ENST00000287295.8; ENST00000460436.6; ENST00000416073.6 | ||
| External Link | RMBase: RNA-editing_site_143076 | ||
| mod ID: A2ISITE003912 | Click to Show/Hide the Full List | ||
| mod site | chrX:130151296-130151297:- | [1] | |
| Sequence | AATACAAAAATTAGCTGGGCATGGTGGCGTGTGCCTGTAGT | ||
| Transcript ID List | ENST00000529877.1; ENST00000416073.6; ENST00000319908.7; ENST00000527892.5; ENST00000287295.8; rmsk_3127173; ENST00000535724.5; ENST00000346424.6 | ||
| External Link | RMBase: RNA-editing_site_143077 | ||
| mod ID: A2ISITE003913 | Click to Show/Hide the Full List | ||
| mod site | chrX:130161427-130161428:- | [1] | |
| Sequence | ACCTCTGTCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCC | ||
| Transcript ID List | ENST00000416073.6; ENST00000535724.5; ENST00000346424.6; ENST00000529877.1; ENST00000527892.5; ENST00000319908.7; ENST00000287295.8 | ||
| External Link | RMBase: RNA-editing_site_143078 | ||
| mod ID: A2ISITE003914 | Click to Show/Hide the Full List | ||
| mod site | chrX:130161744-130161745:- | [1] | |
| Sequence | CGTGGTGGCACATGCCTGTAATCCCTGCTACTCGGGAGGCT | ||
| Transcript ID List | ENST00000529877.1; ENST00000346424.6; rmsk_3127194; ENST00000535724.5; ENST00000319908.7; ENST00000287295.8; ENST00000416073.6; ENST00000527892.5 | ||
| External Link | RMBase: RNA-editing_site_143079 | ||
| mod ID: A2ISITE003915 | Click to Show/Hide the Full List | ||
| mod site | chrX:130161785-130161786:- | [1] | |
| Sequence | GGAGAAACCCCGTCTCTACTAAAAATCAAAAATTAGCCAAG | ||
| Transcript ID List | ENST00000529877.1; ENST00000535724.5; ENST00000346424.6; ENST00000287295.8; ENST00000416073.6; ENST00000527892.5; ENST00000319908.7; rmsk_3127194 | ||
| External Link | RMBase: RNA-editing_site_143080 | ||
| mod ID: A2ISITE003916 | Click to Show/Hide the Full List | ||
| mod site | chrX:130162877-130162878:- | [1] | |
| Sequence | TAACTCATAGTCATCACTCTATGTCTGCATTCAGACACAGA | ||
| Transcript ID List | ENST00000535724.5; ENST00000319908.7; ENST00000416073.6; ENST00000529877.1; ENST00000527892.5; ENST00000287295.8; ENST00000346424.6 | ||
| External Link | RMBase: RNA-editing_site_143081 | ||
2'-O-Methylation (2'-O-Me)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: 2OMSITE000549 | Click to Show/Hide the Full List | ||
| mod site | chrX:130136172-130136173:- | [2] | |
| Sequence | TGCCTCAGGTAGAAACTGACCACATAGTGGCAGCTGTGGGC | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | Nm-seq | ||
| Transcript ID List | ENST00000460436.6; ENST00000346424.6; ENST00000416073.6; ENST00000287295.8; ENST00000319908.7; ENST00000527892.5; ENST00000535724.5 | ||
| External Link | RMBase: Nm_site_6986 | ||
N6-methyladenosine (m6A)
| In total 25 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE093408 | Click to Show/Hide the Full List | ||
| mod site | chrX:130129396-130129397:- | [3] | |
| Sequence | TAGGTAAATTCTTAATGTTCACATAGTGAAATAAATTCTGA | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | HEK293T; hESC-HEK293T | ||
| Seq Type List | DART-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000346424.6; ENST00000535724.5; ENST00000287295.8; ENST00000319908.7; ENST00000460436.6; ENST00000527892.5; ENST00000416073.6 | ||
| External Link | RMBase: m6A_site_872747 | ||
| mod ID: M6ASITE093409 | Click to Show/Hide the Full List | ||
| mod site | chrX:130129549-130129550:- | [4] | |
| Sequence | TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAAACCCA | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | kidney | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000346424.6; ENST00000527892.5; ENST00000319908.7; ENST00000535724.5; ENST00000287295.8; ENST00000416073.6; ENST00000460436.6 | ||
| External Link | RMBase: m6A_site_872748 | ||
| mod ID: M6ASITE093410 | Click to Show/Hide the Full List | ||
| mod site | chrX:130129572-130129573:- | [5] | |
| Sequence | TGAAGTAGCCAAACTATTCAACATTCATGAAGACTGAAGCC | ||
| Motif Score | 2.173910714 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000527892.5; ENST00000319908.7; ENST00000346424.6; ENST00000416073.6; ENST00000287295.8; ENST00000460436.6; ENST00000535724.5 | ||
| External Link | RMBase: m6A_site_872749 | ||
| mod ID: M6ASITE093411 | Click to Show/Hide the Full List | ||
| mod site | chrX:130130000-130130001:- | [5] | |
| Sequence | CGTGGGGATTGTGCTATGGAACATCTTTAACCGAATGCCAA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000319908.7; ENST00000416073.6; ENST00000287295.8; ENST00000346424.6; ENST00000527892.5; ENST00000460436.6; ENST00000535724.5 | ||
| External Link | RMBase: m6A_site_872750 | ||
| mod ID: M6ASITE093412 | Click to Show/Hide the Full List | ||
| mod site | chrX:130130030-130130031:- | [5] | |
| Sequence | TGTCATCTTCTACCTCAGGGACAAAGTGGTCGTGGGGATTG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000416073.6; ENST00000346424.6; ENST00000535724.5; ENST00000460436.6; ENST00000319908.7; ENST00000287295.8; ENST00000527892.5 | ||
| External Link | RMBase: m6A_site_872751 | ||
| mod ID: M6ASITE093413 | Click to Show/Hide the Full List | ||
| mod site | chrX:130131686-130131687:- | [4] | |
| Sequence | AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGTAAGAAA | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | brain; HEK293T | ||
| Seq Type List | m6A-REF-seq; DART-seq | ||
| Transcript ID List | ENST00000535724.5; ENST00000527892.5; ENST00000319908.7; ENST00000287295.8; ENST00000346424.6; ENST00000460436.6; ENST00000416073.6 | ||
| External Link | RMBase: m6A_site_872752 | ||
| mod ID: M6ASITE093414 | Click to Show/Hide the Full List | ||
| mod site | chrX:130136054-130136055:- | [5] | |
| Sequence | AGAGCTACAAGCACGCTCTAACATCTGGGTGGTAAGTGTGC | ||
| Motif Score | 2.168095238 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000416073.6; ENST00000527892.5; ENST00000346424.6; ENST00000535724.5; ENST00000287295.8; ENST00000460436.6; ENST00000319908.7 | ||
| External Link | RMBase: m6A_site_872753 | ||
| mod ID: M6ASITE093415 | Click to Show/Hide the Full List | ||
| mod site | chrX:130136068-130136069:- | [5] | |
| Sequence | TTCCGGGTAAATGCAGAGCTACAAGCACGCTCTAACATCTG | ||
| Motif Score | 2.078666667 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000460436.6; ENST00000287295.8; ENST00000535724.5; ENST00000346424.6; ENST00000416073.6; ENST00000319908.7; ENST00000527892.5 | ||
| External Link | RMBase: m6A_site_872754 | ||
| mod ID: M6ASITE093416 | Click to Show/Hide the Full List | ||
| mod site | chrX:130136105-130136106:- | [6] | |
| Sequence | GACTGGTGGCCTGGAAATAGACTCAGATTTTGGTGGCTTCC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000527892.5; ENST00000287295.8; ENST00000460436.6; ENST00000346424.6; ENST00000535724.5; ENST00000416073.6; ENST00000319908.7 | ||
| External Link | RMBase: m6A_site_872755 | ||
| mod ID: M6ASITE093417 | Click to Show/Hide the Full List | ||
| mod site | chrX:130136171-130136172:- | [5] | |
| Sequence | GCCTCAGGTAGAAACTGACCACATAGTGGCAGCTGTGGGCC | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000319908.7; ENST00000527892.5; ENST00000535724.5; ENST00000460436.6; ENST00000416073.6; ENST00000287295.8; ENST00000346424.6 | ||
| External Link | RMBase: m6A_site_872756 | ||
| mod ID: M6ASITE093418 | Click to Show/Hide the Full List | ||
| mod site | chrX:130136178-130136179:- | [7] | |
| Sequence | CTTTTTTGCCTCAGGTAGAAACTGACCACATAGTGGCAGCT | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HepG2 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000535724.5; ENST00000416073.6; ENST00000346424.6; ENST00000319908.7; ENST00000287295.8; ENST00000460436.6; ENST00000527892.5 | ||
| External Link | RMBase: m6A_site_872757 | ||
| mod ID: M6ASITE093419 | Click to Show/Hide the Full List | ||
| mod site | chrX:130138617-130138618:- | [6] | |
| Sequence | GGGGGCTTCCTTGGTAGCGAACTGGCCTGTGCTCTTGGCAG | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000319908.7; ENST00000416073.6; ENST00000533719.1; ENST00000527892.5; ENST00000287295.8; ENST00000535724.5; ENST00000346424.6 | ||
| External Link | RMBase: m6A_site_872758 | ||
| mod ID: M6ASITE093420 | Click to Show/Hide the Full List | ||
| mod site | chrX:130138693-130138694:- | [6] | |
| Sequence | TGTGATCCTGCAGATTGGAGACTTTAGAAGCTTGGAGAAGA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000527892.5; ENST00000287295.8; ENST00000346424.6; ENST00000319908.7; ENST00000416073.6; ENST00000533719.1; ENST00000535724.5 | ||
| External Link | RMBase: m6A_site_872759 | ||
| mod ID: M6ASITE093421 | Click to Show/Hide the Full List | ||
| mod site | chrX:130139811-130139812:- | [5] | |
| Sequence | GAGCAGAGGTGAAGAGTAGAACAACGCTTTTCAGAAAGGTA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | hESC-HEK293T; Huh7 | ||
| Seq Type List | MAZTER-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000535724.5; ENST00000346424.6; ENST00000527892.5; ENST00000533719.1; ENST00000319908.7; ENST00000416073.6; ENST00000287295.8 | ||
| External Link | RMBase: m6A_site_872760 | ||
| mod ID: M6ASITE093422 | Click to Show/Hide the Full List | ||
| mod site | chrX:130140581-130140582:- | [3] | |
| Sequence | GTGAGAGACAACATGGTGAAACTTAATGATGGCTCTCAAAT | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000527892.5; ENST00000416073.6; ENST00000533719.1; ENST00000287295.8; ENST00000319908.7; ENST00000346424.6; ENST00000535724.5 | ||
| External Link | RMBase: m6A_site_872761 | ||
| mod ID: M6ASITE093423 | Click to Show/Hide the Full List | ||
| mod site | chrX:130140591-130140592:- | [5] | |
| Sequence | ACAGCTGGATGTGAGAGACAACATGGTGAAACTTAATGATG | ||
| Motif Score | 2.173910714 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000416073.6; ENST00000346424.6; ENST00000319908.7; ENST00000527892.5; ENST00000533719.1; ENST00000287295.8; ENST00000535724.5 | ||
| External Link | RMBase: m6A_site_872762 | ||
| mod ID: M6ASITE093424 | Click to Show/Hide the Full List | ||
| mod site | chrX:130140611-130140612:- | [4] | |
| Sequence | GTGTGACTGTACCAGGTAGTACAGCTGGATGTGAGAGACAA | ||
| Motif Score | 2.856142857 | ||
| Cell/Tissue List | kidney; liver | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000527892.5; ENST00000287295.8; ENST00000346424.6; ENST00000535724.5; ENST00000533719.1; ENST00000319908.7; ENST00000416073.6 | ||
| External Link | RMBase: m6A_site_872763 | ||
| mod ID: M6ASITE093425 | Click to Show/Hide the Full List | ||
| mod site | chrX:130147535-130147536:- | [5] | |
| Sequence | TTTCAGATGACCCAAATGTCACAAAGACACTGCGATTCAAA | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000287295.8; ENST00000346424.6; ENST00000535724.5; ENST00000527892.5; ENST00000319908.7; ENST00000416073.6; ENST00000533719.1 | ||
| External Link | RMBase: m6A_site_872764 | ||
| mod ID: M6ASITE093426 | Click to Show/Hide the Full List | ||
| mod site | chrX:130147588-130147589:- | [5] | |
| Sequence | TGAAGATCCTGAGCTGCCGTACATGCGACCTCCTCTTTCAA | ||
| Motif Score | 2.856142857 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000416073.6; ENST00000533719.1; ENST00000287295.8; ENST00000346424.6; ENST00000319908.7; ENST00000535724.5; ENST00000527892.5 | ||
| External Link | RMBase: m6A_site_872765 | ||
| mod ID: M6ASITE093427 | Click to Show/Hide the Full List | ||
| mod site | chrX:130147848-130147849:- | [5] | |
| Sequence | AGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGTCATGTTC | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000287295.8; ENST00000416073.6; ENST00000319908.7; ENST00000527892.5; ENST00000346424.6; ENST00000533719.1; ENST00000529877.1; ENST00000535724.5 | ||
| External Link | RMBase: m6A_site_872766 | ||
| mod ID: M6ASITE093428 | Click to Show/Hide the Full List | ||
| mod site | chrX:130156553-130156554:- | [8] | |
| Sequence | CTAGAACTCCAGATGACAAGACAAATGGCTAGCTCTGGTGC | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; hESC-HEK293T; peripheral-blood | ||
| Seq Type List | m6A-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000319908.7; ENST00000535724.5; ENST00000527892.5; ENST00000287295.8; ENST00000529877.1; ENST00000416073.6; ENST00000346424.6 | ||
| External Link | RMBase: m6A_site_872767 | ||
| mod ID: M6ASITE093429 | Click to Show/Hide the Full List | ||
| mod site | chrX:130156568-130156569:- | [8] | |
| Sequence | CGATGGCATGTTCCTCTAGAACTCCAGATGACAAGACAAAT | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; peripheral-blood | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000527892.5; ENST00000346424.6; ENST00000287295.8; ENST00000529877.1; ENST00000416073.6; ENST00000319908.7; ENST00000535724.5 | ||
| External Link | RMBase: m6A_site_872768 | ||
| mod ID: M6ASITE093430 | Click to Show/Hide the Full List | ||
| mod site | chrX:130165561-130165562:- | [8] | |
| Sequence | CCGAAGCCCGAGGCAGAGGAACCGGCTCCCAGGTGACTGAC | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2; peripheral-blood; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000416073.6; ENST00000527892.5; ENST00000287295.8; ENST00000529877.1; ENST00000346424.6; ENST00000535724.5; ENST00000319908.7 | ||
| External Link | RMBase: m6A_site_872769 | ||
| mod ID: M6ASITE093431 | Click to Show/Hide the Full List | ||
| mod site | chrX:130165592-130165593:- | [8] | |
| Sequence | AGCTGGTGCCCTTGGTGCGGACCGTGTGCGTCCGAAGCCCG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; A549; peripheral-blood; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000416073.6; ENST00000319908.7; ENST00000529877.1; ENST00000287295.8; ENST00000535724.5; ENST00000527892.5; ENST00000346424.6 | ||
| External Link | RMBase: m6A_site_872770 | ||
| mod ID: M6ASITE093432 | Click to Show/Hide the Full List | ||
| mod site | chrX:130165748-130165749:- | [8] | |
| Sequence | CGTAATGTGCGTGTGAAGAGACTGGGGGAGCTGGCCGGGGC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HepG2; A549; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000319908.7; ENST00000535724.5; ENST00000529877.1; ENST00000287295.8 | ||
| External Link | RMBase: m6A_site_872771 | ||
References
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