General Information of the Epigenetic Target (ID: EPITAR00364)
Target Name Apoptosis inducing factor mitochondria associated 1 (AIFM1)
Synonyms
AIF; CMTX4; DFNX5; PDCD8; NAMSD; AUNX1; programmed cell death 8 (apoptosis-inducing factor); neuropathy, axonal, motor-sensory with deafness and mental retardation (Cowchock syndrome); apoptosis-inducing factor, mitochondrion-associated, 1; apoptosis inducing factor, mitochondria associated 1; auditory neuropathy, X-linked recessive 1
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Gene Name AIFM1
Sequence
MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGASGGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHEDLNEVAKLFNIHED
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Family FAD-dependent oxidoreductase family
Function
Functions both as NADH oxidoreductase and as regulator of apoptosis (PubMed:20362274, PubMed:23217327, PubMed:17094969, PubMed:33168626). In response to apoptotic stimuli, it is released from the mitochondrion intermembrane space into the cytosol and to the nucleus, where it functions as a proapoptotic factor in a caspase-independent pathway (PubMed:20362274). Release into the cytoplasm is mediated upon binding to poly-ADP-ribose chains (By similarity). The soluble form (AIFsol) found in the nucleus induces 'parthanatos' i.e. caspase-independent fragmentation of chromosomal DNA (PubMed:20362274). Binds to DNA in a sequence-independent manner (PubMed:27178839). Interacts with EIF3G, and thereby inhibits the EIF3 machinery and protein synthesis, and activates caspase-7 to amplify apoptosis (PubMed:17094969). Plays a critical role in caspase-independent, pyknotic cell death in hydrogen peroxide-exposed cells (PubMed:19418225). In contrast, participates in normal mitochondrial metabolism. Plays an important role in the regulation of respiratory chain biogenesis by interacting with CHCHD4 and controlling CHCHD4 mitochondrial import (PubMed:26004228).
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Gene ID 9131
HGNC ID HGNC:8768
Ensembl Gene ID ENSG00000156709
KEGG ID hsa:9131
Chromosomal Location Xq26.1
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00364)
Apoptosis inducing factor mitochondria associated 1 (AIFM1)
Adenosine-to-Inosine editing (A-to-I)
In total 6 m6A sequence/site(s) in this target gene
mod ID: A2ISITE003911 Click to Show/Hide the Full List
mod site chrX:130137044-130137045:- [1]
Sequence TTTCTATATGCTGCCACTCTATTTCCTTTGAGTGTGACCTA
Transcript ID List ENST00000527892.5; ENST00000319908.7; ENST00000533719.1; ENST00000346424.6; ENST00000535724.5; ENST00000287295.8; ENST00000460436.6; ENST00000416073.6
External Link RMBase: RNA-editing_site_143076
mod ID: A2ISITE003912 Click to Show/Hide the Full List
mod site chrX:130151296-130151297:- [1]
Sequence AATACAAAAATTAGCTGGGCATGGTGGCGTGTGCCTGTAGT
Transcript ID List ENST00000529877.1; ENST00000416073.6; ENST00000319908.7; ENST00000527892.5; ENST00000287295.8; rmsk_3127173; ENST00000535724.5; ENST00000346424.6
External Link RMBase: RNA-editing_site_143077
mod ID: A2ISITE003913 Click to Show/Hide the Full List
mod site chrX:130161427-130161428:- [1]
Sequence ACCTCTGTCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCC
Transcript ID List ENST00000416073.6; ENST00000535724.5; ENST00000346424.6; ENST00000529877.1; ENST00000527892.5; ENST00000319908.7; ENST00000287295.8
External Link RMBase: RNA-editing_site_143078
mod ID: A2ISITE003914 Click to Show/Hide the Full List
mod site chrX:130161744-130161745:- [1]
Sequence CGTGGTGGCACATGCCTGTAATCCCTGCTACTCGGGAGGCT
Transcript ID List ENST00000529877.1; ENST00000346424.6; rmsk_3127194; ENST00000535724.5; ENST00000319908.7; ENST00000287295.8; ENST00000416073.6; ENST00000527892.5
External Link RMBase: RNA-editing_site_143079
mod ID: A2ISITE003915 Click to Show/Hide the Full List
mod site chrX:130161785-130161786:- [1]
Sequence GGAGAAACCCCGTCTCTACTAAAAATCAAAAATTAGCCAAG
Transcript ID List ENST00000529877.1; ENST00000535724.5; ENST00000346424.6; ENST00000287295.8; ENST00000416073.6; ENST00000527892.5; ENST00000319908.7; rmsk_3127194
External Link RMBase: RNA-editing_site_143080
mod ID: A2ISITE003916 Click to Show/Hide the Full List
mod site chrX:130162877-130162878:- [1]
Sequence TAACTCATAGTCATCACTCTATGTCTGCATTCAGACACAGA
Transcript ID List ENST00000535724.5; ENST00000319908.7; ENST00000416073.6; ENST00000529877.1; ENST00000527892.5; ENST00000287295.8; ENST00000346424.6
External Link RMBase: RNA-editing_site_143081
2'-O-Methylation (2'-O-Me)
In total 1 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000549 Click to Show/Hide the Full List
mod site chrX:130136172-130136173:- [2]
Sequence TGCCTCAGGTAGAAACTGACCACATAGTGGCAGCTGTGGGC
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000460436.6; ENST00000346424.6; ENST00000416073.6; ENST00000287295.8; ENST00000319908.7; ENST00000527892.5; ENST00000535724.5
External Link RMBase: Nm_site_6986
N6-methyladenosine (m6A)
In total 25 m6A sequence/site(s) in this target gene
mod ID: M6ASITE093408 Click to Show/Hide the Full List
mod site chrX:130129396-130129397:- [3]
Sequence TAGGTAAATTCTTAATGTTCACATAGTGAAATAAATTCTGA
Motif Score 2.047297619
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000346424.6; ENST00000535724.5; ENST00000287295.8; ENST00000319908.7; ENST00000460436.6; ENST00000527892.5; ENST00000416073.6
External Link RMBase: m6A_site_872747
mod ID: M6ASITE093409 Click to Show/Hide the Full List
mod site chrX:130129549-130129550:- [4]
Sequence TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAAACCCA
Motif Score 2.053113095
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000346424.6; ENST00000527892.5; ENST00000319908.7; ENST00000535724.5; ENST00000287295.8; ENST00000416073.6; ENST00000460436.6
External Link RMBase: m6A_site_872748
mod ID: M6ASITE093410 Click to Show/Hide the Full List
mod site chrX:130129572-130129573:- [5]
Sequence TGAAGTAGCCAAACTATTCAACATTCATGAAGACTGAAGCC
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000527892.5; ENST00000319908.7; ENST00000346424.6; ENST00000416073.6; ENST00000287295.8; ENST00000460436.6; ENST00000535724.5
External Link RMBase: m6A_site_872749
mod ID: M6ASITE093411 Click to Show/Hide the Full List
mod site chrX:130130000-130130001:- [5]
Sequence CGTGGGGATTGTGCTATGGAACATCTTTAACCGAATGCCAA
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000319908.7; ENST00000416073.6; ENST00000287295.8; ENST00000346424.6; ENST00000527892.5; ENST00000460436.6; ENST00000535724.5
External Link RMBase: m6A_site_872750
mod ID: M6ASITE093412 Click to Show/Hide the Full List
mod site chrX:130130030-130130031:- [5]
Sequence TGTCATCTTCTACCTCAGGGACAAAGTGGTCGTGGGGATTG
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000416073.6; ENST00000346424.6; ENST00000535724.5; ENST00000460436.6; ENST00000319908.7; ENST00000287295.8; ENST00000527892.5
External Link RMBase: m6A_site_872751
mod ID: M6ASITE093413 Click to Show/Hide the Full List
mod site chrX:130131686-130131687:- [4]
Sequence AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGTAAGAAA
Motif Score 2.053113095
Cell/Tissue List brain; HEK293T
Seq Type List m6A-REF-seq; DART-seq
Transcript ID List ENST00000535724.5; ENST00000527892.5; ENST00000319908.7; ENST00000287295.8; ENST00000346424.6; ENST00000460436.6; ENST00000416073.6
External Link RMBase: m6A_site_872752
mod ID: M6ASITE093414 Click to Show/Hide the Full List
mod site chrX:130136054-130136055:- [5]
Sequence AGAGCTACAAGCACGCTCTAACATCTGGGTGGTAAGTGTGC
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000416073.6; ENST00000527892.5; ENST00000346424.6; ENST00000535724.5; ENST00000287295.8; ENST00000460436.6; ENST00000319908.7
External Link RMBase: m6A_site_872753
mod ID: M6ASITE093415 Click to Show/Hide the Full List
mod site chrX:130136068-130136069:- [5]
Sequence TTCCGGGTAAATGCAGAGCTACAAGCACGCTCTAACATCTG
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000460436.6; ENST00000287295.8; ENST00000535724.5; ENST00000346424.6; ENST00000416073.6; ENST00000319908.7; ENST00000527892.5
External Link RMBase: m6A_site_872754
mod ID: M6ASITE093416 Click to Show/Hide the Full List
mod site chrX:130136105-130136106:- [6]
Sequence GACTGGTGGCCTGGAAATAGACTCAGATTTTGGTGGCTTCC
Motif Score 3.319380952
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000527892.5; ENST00000287295.8; ENST00000460436.6; ENST00000346424.6; ENST00000535724.5; ENST00000416073.6; ENST00000319908.7
External Link RMBase: m6A_site_872755
mod ID: M6ASITE093417 Click to Show/Hide the Full List
mod site chrX:130136171-130136172:- [5]
Sequence GCCTCAGGTAGAAACTGACCACATAGTGGCAGCTGTGGGCC
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000319908.7; ENST00000527892.5; ENST00000535724.5; ENST00000460436.6; ENST00000416073.6; ENST00000287295.8; ENST00000346424.6
External Link RMBase: m6A_site_872756
mod ID: M6ASITE093418 Click to Show/Hide the Full List
mod site chrX:130136178-130136179:- [7]
Sequence CTTTTTTGCCTCAGGTAGAAACTGACCACATAGTGGCAGCT
Motif Score 2.627720238
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000535724.5; ENST00000416073.6; ENST00000346424.6; ENST00000319908.7; ENST00000287295.8; ENST00000460436.6; ENST00000527892.5
External Link RMBase: m6A_site_872757
mod ID: M6ASITE093419 Click to Show/Hide the Full List
mod site chrX:130138617-130138618:- [6]
Sequence GGGGGCTTCCTTGGTAGCGAACTGGCCTGTGCTCTTGGCAG
Motif Score 3.373380952
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000319908.7; ENST00000416073.6; ENST00000533719.1; ENST00000527892.5; ENST00000287295.8; ENST00000535724.5; ENST00000346424.6
External Link RMBase: m6A_site_872758
mod ID: M6ASITE093420 Click to Show/Hide the Full List
mod site chrX:130138693-130138694:- [6]
Sequence TGTGATCCTGCAGATTGGAGACTTTAGAAGCTTGGAGAAGA
Motif Score 3.319380952
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000527892.5; ENST00000287295.8; ENST00000346424.6; ENST00000319908.7; ENST00000416073.6; ENST00000533719.1; ENST00000535724.5
External Link RMBase: m6A_site_872759
mod ID: M6ASITE093421 Click to Show/Hide the Full List
mod site chrX:130139811-130139812:- [5]
Sequence GAGCAGAGGTGAAGAGTAGAACAACGCTTTTCAGAAAGGTA
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T; Huh7
Seq Type List MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000535724.5; ENST00000346424.6; ENST00000527892.5; ENST00000533719.1; ENST00000319908.7; ENST00000416073.6; ENST00000287295.8
External Link RMBase: m6A_site_872760
mod ID: M6ASITE093422 Click to Show/Hide the Full List
mod site chrX:130140581-130140582:- [3]
Sequence GTGAGAGACAACATGGTGAAACTTAATGATGGCTCTCAAAT
Motif Score 2.627720238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000527892.5; ENST00000416073.6; ENST00000533719.1; ENST00000287295.8; ENST00000319908.7; ENST00000346424.6; ENST00000535724.5
External Link RMBase: m6A_site_872761
mod ID: M6ASITE093423 Click to Show/Hide the Full List
mod site chrX:130140591-130140592:- [5]
Sequence ACAGCTGGATGTGAGAGACAACATGGTGAAACTTAATGATG
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000416073.6; ENST00000346424.6; ENST00000319908.7; ENST00000527892.5; ENST00000533719.1; ENST00000287295.8; ENST00000535724.5
External Link RMBase: m6A_site_872762
mod ID: M6ASITE093424 Click to Show/Hide the Full List
mod site chrX:130140611-130140612:- [4]
Sequence GTGTGACTGTACCAGGTAGTACAGCTGGATGTGAGAGACAA
Motif Score 2.856142857
Cell/Tissue List kidney; liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000527892.5; ENST00000287295.8; ENST00000346424.6; ENST00000535724.5; ENST00000533719.1; ENST00000319908.7; ENST00000416073.6
External Link RMBase: m6A_site_872763
mod ID: M6ASITE093425 Click to Show/Hide the Full List
mod site chrX:130147535-130147536:- [5]
Sequence TTTCAGATGACCCAAATGTCACAAAGACACTGCGATTCAAA
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000287295.8; ENST00000346424.6; ENST00000535724.5; ENST00000527892.5; ENST00000319908.7; ENST00000416073.6; ENST00000533719.1
External Link RMBase: m6A_site_872764
mod ID: M6ASITE093426 Click to Show/Hide the Full List
mod site chrX:130147588-130147589:- [5]
Sequence TGAAGATCCTGAGCTGCCGTACATGCGACCTCCTCTTTCAA
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000416073.6; ENST00000533719.1; ENST00000287295.8; ENST00000346424.6; ENST00000319908.7; ENST00000535724.5; ENST00000527892.5
External Link RMBase: m6A_site_872765
mod ID: M6ASITE093427 Click to Show/Hide the Full List
mod site chrX:130147848-130147849:- [5]
Sequence AGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGTCATGTTC
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000287295.8; ENST00000416073.6; ENST00000319908.7; ENST00000527892.5; ENST00000346424.6; ENST00000533719.1; ENST00000529877.1; ENST00000535724.5
External Link RMBase: m6A_site_872766
mod ID: M6ASITE093428 Click to Show/Hide the Full List
mod site chrX:130156553-130156554:- [8]
Sequence CTAGAACTCCAGATGACAAGACAAATGGCTAGCTCTGGTGC
Motif Score 2.897386905
Cell/Tissue List HeLa; hESC-HEK293T; peripheral-blood
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000319908.7; ENST00000535724.5; ENST00000527892.5; ENST00000287295.8; ENST00000529877.1; ENST00000416073.6; ENST00000346424.6
External Link RMBase: m6A_site_872767
mod ID: M6ASITE093429 Click to Show/Hide the Full List
mod site chrX:130156568-130156569:- [8]
Sequence CGATGGCATGTTCCTCTAGAACTCCAGATGACAAGACAAAT
Motif Score 3.373380952
Cell/Tissue List HeLa; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000527892.5; ENST00000346424.6; ENST00000287295.8; ENST00000529877.1; ENST00000416073.6; ENST00000319908.7; ENST00000535724.5
External Link RMBase: m6A_site_872768
mod ID: M6ASITE093430 Click to Show/Hide the Full List
mod site chrX:130165561-130165562:- [8]
Sequence CCGAAGCCCGAGGCAGAGGAACCGGCTCCCAGGTGACTGAC
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; peripheral-blood; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000416073.6; ENST00000527892.5; ENST00000287295.8; ENST00000529877.1; ENST00000346424.6; ENST00000535724.5; ENST00000319908.7
External Link RMBase: m6A_site_872769
mod ID: M6ASITE093431 Click to Show/Hide the Full List
mod site chrX:130165592-130165593:- [8]
Sequence AGCTGGTGCCCTTGGTGCGGACCGTGTGCGTCCGAAGCCCG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; peripheral-blood; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000416073.6; ENST00000319908.7; ENST00000529877.1; ENST00000287295.8; ENST00000535724.5; ENST00000527892.5; ENST00000346424.6
External Link RMBase: m6A_site_872770
mod ID: M6ASITE093432 Click to Show/Hide the Full List
mod site chrX:130165748-130165749:- [8]
Sequence CGTAATGTGCGTGTGAAGAGACTGGGGGAGCTGGCCGGGGC
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; A549; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000319908.7; ENST00000535724.5; ENST00000529877.1; ENST00000287295.8
External Link RMBase: m6A_site_872771