Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00347)

Target Name	Poly(rC)-binding protein 2
Synonyms	rC; Alpha-CP2; Heterogeneous nuclear ribonucleoprotein E2; hnRNP E2 Click to Show/Hide
Gene Name	PCBP2
Sequence	MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS Click to Show/Hide
Function	Single-stranded nucleic acid binding protein that binds preferentially to oligo dC (PubMed:7607214, PubMed:12414943). Major cellular poly(rC)-binding protein (PubMed:12414943). Binds also poly(rU) (PubMed:12414943). Acts as a negative regulator of antiviral signaling (PubMed:19881509, PubMed:35322803). Negatively regulates cellular antiviral responses mediated by MAVS signaling (PubMed:19881509). It acts as an adapter between MAVS and the E3 ubiquitin ligase ITCH, therefore triggering MAVS ubiquitination and degradation (PubMed:19881509). Negativeley regulates the cGAS-STING pathway via interaction with CGAS, preventing the formation of liquid-like droplets in which CGAS is activated (PubMed:35322803). Together with PCBP1, required for erythropoiesis, possibly by regulating mRNA splicing (By similarity). Click to Show/Hide
Gene ID	5094
HGNC ID	HGNC:8648
Ensembl Gene ID	ENSG00000197111
KEGG ID	hsa:5094
Chromosomal Location	12q13.13

RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00347)

Poly(rC)-binding protein 2

N4-acetylcytidine (ac4C)

In total 2 m6A sequence/site(s) in this target gene
mod ID: AC4SITE000175		Click to Show/Hide the Full List
mod site	chr12:53455486-53455487:+		[1]
Sequence	GAATCAGTTAAGAAGATGCGCGAGGAGGTAAGTTATGAAAG
Cell/Tissue List	H1
Seq Type List	ac4C-seq
Transcript ID List	ENST00000546463.5; ENST00000550910.1; ENST00000548933.5; ENST00000552296.6; ENST00000550520.6; ENST00000359282.9; ENST00000551104.5; ENST00000439930.7; ENST00000546652.6; ENST00000550192.5; ENST00000562264.5; ENST00000549863.5; ENST00000359462.9; ENST00000447282.5; ENST00000455667.7; ENST00000552819.5; ENST00000437231.5; ENST00000547717.1
External Link	RMBase: ac4C_site_423
mod ID: AC4SITE000176		Click to Show/Hide the Full List
mod site	chr12:53467358-53467359:+
Sequence	AGAGGCCAGTCCCAAGGTCTCAGCTTGACATCTGTTTAAAA
Cell/Tissue List	DLD1
Seq Type List	acRIP-seq
Transcript ID List	ENST00000547987.2; ENST00000359462.9; ENST00000447282.5; ENST00000552296.6; ENST00000437231.5; ENST00000553064.6; ENST00000455667.7; ENST00000550585.5; ENST00000552819.5; ENST00000359282.9; ENST00000439930.7; ENST00000546463.5; ENST00000548933.5; ENST00000547717.1; ENST00000562264.5; ENST00000547859.2; ENST00000549863.5; ENST00000549272.1
External Link	RMBase: ac4C_site_424

Adenosine-to-Inosine editing (A-to-I)

In total 3 m6A sequence/site(s) in this target gene
mod ID: A2ISITE005593		Click to Show/Hide the Full List
mod site	chr12:53470257-53470258:+		[2]
Sequence	TGTGCTGGCCCGCACCTGTAATCCCATTACTCAGAAGGCTG
Transcript ID List	ENST00000439930.7; ENST00000359462.9; ENST00000552296.6; ENST00000562264.5; ENST00000550585.5; ENST00000552819.5; ENST00000548933.5; ENST00000553064.6; ENST00000359282.9; ENST00000437231.5; ENST00000549863.5; ENST00000447282.5; ENST00000455667.7; ENST00000547048.5; rmsk_3793572; ENST00000547859.2; ENST00000546463.5; ENST00000550733.1
External Link	RMBase: RNA-editing_site_28886
mod ID: A2ISITE005594		Click to Show/Hide the Full List
mod site	chr12:53470503-53470504:+		[2]
Sequence	AGCCTTGAACTTCCAGGCTTAAGAGATCCTCCCATCTCAGC
Transcript ID List	ENST00000359282.9; ENST00000552819.5; ENST00000547859.2; ENST00000455667.7; ENST00000548933.5; ENST00000550585.5; ENST00000553064.6; ENST00000549863.5; ENST00000359462.9; ENST00000546463.5; ENST00000550733.1; ENST00000552296.6; ENST00000437231.5; ENST00000439930.7; ENST00000447282.5; ENST00000562264.5; ENST00000547048.5
External Link	RMBase: RNA-editing_site_28887
mod ID: A2ISITE005595		Click to Show/Hide the Full List
mod site	chr12:53470801-53470802:+		[2]
Sequence	TCCCAAGGCAAAAACACCTTAGGAATTGGCCAGAATTCTTG
Transcript ID List	ENST00000550733.1; ENST00000553064.6; ENST00000548933.5; ENST00000552819.5; ENST00000546463.5; ENST00000447282.5; ENST00000437231.5; ENST00000547859.2; ENST00000550585.5; ENST00000562264.5; ENST00000549863.5; ENST00000439930.7; ENST00000455667.7; ENST00000359462.9; ENST00000552296.6; ENST00000359282.9; ENST00000547048.5
External Link	RMBase: RNA-editing_site_28888

2'-O-Methylation (2'-O-Me)

In total 4 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000057		Click to Show/Hide the Full List
mod site	chr12:53479639-53479640:+		[3]
Sequence	GTTCAGCTGTTGATGCTGAGATCCATATTTAGTTTTATAAG
Cell/Tissue List	HeLa
Seq Type List	Nm-seq
Transcript ID List	ENST00000552819.5; ENST00000359462.9; ENST00000359282.9; ENST00000455667.7; ENST00000550585.5; ENST00000562264.5; ENST00000549863.5; ENST00000546463.5; ENST00000447282.5; ENST00000547048.5; ENST00000437231.5; ENST00000547859.2
External Link	RMBase: Nm_site_1349
mod ID: 2OMSITE000055		Click to Show/Hide the Full List
mod site	chr12:53454828-53454829:+		[3]
Sequence	CGGTGTGATTGAAGGTGGATTAAATGTCACTCTCACCATCC
Cell/Tissue List	HeLa
Seq Type List	Nm-seq
Transcript ID List	ENST00000359462.9; ENST00000552296.6; ENST00000447282.5; ENST00000455667.7; ENST00000552980.6; ENST00000439930.7; ENST00000549863.5; ENST00000551104.5; ENST00000546463.5; ENST00000437231.5; ENST00000548933.5; ENST00000359282.9; ENST00000550910.1; ENST00000552819.5; ENST00000546652.6; ENST00000550192.5; ENST00000547717.1; ENST00000550520.6
External Link	RMBase: Nm_site_1347
mod ID: 2OMSITE000056		Click to Show/Hide the Full List
mod site	chr12:53468801-53468802:+		[3]
Sequence	TTGGATGCATCTGCTCAGACTACTTCTCATGAACTCACCAT
Cell/Tissue List	HEK293
Seq Type List	Nm-seq
Transcript ID List	ENST00000548933.5; ENST00000359282.9; ENST00000552296.6; ENST00000552819.5; ENST00000550585.5; ENST00000546463.5; ENST00000547048.5; ENST00000437231.5; ENST00000550733.1; ENST00000455667.7; ENST00000562264.5; ENST00000547859.2; ENST00000549863.5; ENST00000447282.5; ENST00000553064.6; ENST00000359462.9; ENST00000439930.7
External Link	RMBase: Nm_site_1348
mod ID: 2OMSITE000058		Click to Show/Hide the Full List
mod site	chr12:53479801-53479802:+		[3]
Sequence	AAAGATGGACTGGAGCTTTTTCTTTGTGAATAGAAACTGGA
Cell/Tissue List	HeLa
Seq Type List	Nm-seq
Transcript ID List	ENST00000437231.5; ENST00000447282.5; ENST00000550585.5; ENST00000552819.5; ENST00000547859.2; ENST00000547048.5; ENST00000359462.9; ENST00000359282.9; ENST00000455667.7
External Link	RMBase: Nm_site_1350

5-methylcytidine (m5C)

In total 10 m6A sequence/site(s) in this target gene
mod ID: M5CSITE000026		Click to Show/Hide the Full List
mod site	chr12:53452351-53452352:+		[4]
Sequence	TTCCCGCCCGCTCCCCTTTTCCCCTCAGTCGCCTCGCGCCT
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000547717.1; ENST00000549863.5; ENST00000550520.6; ENST00000447282.5; ENST00000546463.5; ENST00000359282.9; ENST00000437231.5; ENST00000359462.9
External Link	RMBase: m5C_site_10223
mod ID: M5CSITE000027		Click to Show/Hide the Full List
mod site	chr12:53452352-53452353:+		[4]
Sequence	TCCCGCCCGCTCCCCTTTTCCCCTCAGTCGCCTCGCGCCTG
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000546463.5; ENST00000547717.1; ENST00000447282.5; ENST00000359462.9; ENST00000437231.5; ENST00000550520.6; ENST00000549863.5; ENST00000359282.9
External Link	RMBase: m5C_site_10224
mod ID: M5CSITE000028		Click to Show/Hide the Full List
mod site	chr12:53452356-53452357:+		[4]
Sequence	GCCCGCTCCCCTTTTCCCCTCAGTCGCCTCGCGCCTGCAGG
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000546463.5; ENST00000547717.1; ENST00000549863.5; ENST00000447282.5; ENST00000359462.9; ENST00000550520.6; ENST00000437231.5; ENST00000359282.9
External Link	RMBase: m5C_site_10225
mod ID: M5CSITE000029		Click to Show/Hide the Full List
mod site	chr12:53455876-53455877:+		[4]
Sequence	CTTCTTTTGGATCTTGTTTCCTATCTAGAGTGGTGCACGTA
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000359462.9; ENST00000439930.7; ENST00000562264.5; ENST00000549863.5; ENST00000550910.1; ENST00000546463.5; ENST00000550192.5; ENST00000547717.1; ENST00000437231.5; ENST00000552296.6; ENST00000447282.5; ENST00000550520.6; ENST00000551104.5; ENST00000455667.7; ENST00000548933.5; ENST00000552819.5; ENST00000546652.6; ENST00000359282.9
External Link	RMBase: m5C_site_10226
mod ID: M5CSITE000030		Click to Show/Hide the Full List
mod site	chr12:53455880-53455881:+		[4]
Sequence	TTTTGGATCTTGTTTCCTATCTAGAGTGGTGCACGTATCAA
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000447282.5; ENST00000550910.1; ENST00000439930.7; ENST00000548933.5; ENST00000546463.5; ENST00000550192.5; ENST00000546652.6; ENST00000437231.5; ENST00000551104.5; ENST00000552819.5; ENST00000455667.7; ENST00000550520.6; ENST00000547717.1; ENST00000552296.6; ENST00000359462.9; ENST00000549863.5; ENST00000359282.9; ENST00000562264.5
External Link	RMBase: m5C_site_10227
mod ID: M5CSITE000031		Click to Show/Hide the Full List
mod site	chr12:53461008-53461009:+		[4]
Sequence	ATTTTGAATTTCTTTTTACTCCAAAGAGTACAGGGGCTCAG
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000551104.5; ENST00000547717.1; ENST00000549863.5; ENST00000547987.2; ENST00000359462.9; ENST00000562264.5; ENST00000447282.5; ENST00000455667.7; ENST00000437231.5; ENST00000550585.5; ENST00000552819.5; ENST00000439930.7; ENST00000546463.5; ENST00000546652.6; ENST00000550520.6; ENST00000548933.5; ENST00000359282.9; ENST00000552296.6
External Link	RMBase: m5C_site_10228
mod ID: M5CSITE000032		Click to Show/Hide the Full List
mod site	chr12:53461009-53461010:+		[4]
Sequence	TTTTGAATTTCTTTTTACTCCAAAGAGTACAGGGGCTCAGG
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000447282.5; ENST00000552819.5; ENST00000551104.5; ENST00000359462.9; ENST00000550520.6; ENST00000437231.5; ENST00000546652.6; ENST00000548933.5; ENST00000439930.7; ENST00000550585.5; ENST00000562264.5; ENST00000547987.2; ENST00000546463.5; ENST00000547717.1; ENST00000455667.7; ENST00000359282.9; ENST00000552296.6; ENST00000549863.5
External Link	RMBase: m5C_site_10229
mod ID: M5CSITE000033		Click to Show/Hide the Full List
mod site	chr12:53461150-53461151:+		[4]
Sequence	GGTCATGTTGGAGGTAAGCCCTCAGGCTCATGCTGAAAATG
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000359282.9; ENST00000455667.7; ENST00000547987.2; ENST00000547717.1; ENST00000439930.7; ENST00000562264.5; ENST00000550585.5; ENST00000553064.6; ENST00000548933.5; ENST00000552296.6; ENST00000552819.5; ENST00000546463.5; ENST00000547859.2; ENST00000546652.6; ENST00000437231.5; ENST00000359462.9; ENST00000549863.5; ENST00000447282.5
External Link	RMBase: m5C_site_10230
mod ID: M5CSITE000034		Click to Show/Hide the Full List
mod site	chr12:53462485-53462486:+		[4]
Sequence	TTTTTTTCCCCTCTGACTCTCTCCCAGTCCCCCCCGAAGGG
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000359462.9; ENST00000550585.5; ENST00000455667.7; ENST00000547987.2; ENST00000548933.5; ENST00000439930.7; ENST00000447282.5; ENST00000547717.1; ENST00000546463.5; ENST00000359282.9; ENST00000546652.6; ENST00000553064.6; ENST00000547859.2; ENST00000552819.5; ENST00000549863.5; ENST00000552296.6; ENST00000437231.5; ENST00000562264.5
External Link	RMBase: m5C_site_10231
mod ID: M5CSITE000035		Click to Show/Hide the Full List
mod site	chr12:53480964-53480965:+		[4]
Sequence	AGGAAGGGGCTTGCCCTTAGCCACAGCTCTACGGCTGTGCC
Cell/Tissue List	liver
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000455667.7; ENST00000447282.5; ENST00000437231.5
External Link	RMBase: m5C_site_10232

N6-methyladenosine (m6A)

In total 71 m6A sequence/site(s) in this target gene
mod ID: M6ASITE012814		Click to Show/Hide the Full List
mod site	chr12:53452106-53452107:+		[5]
Sequence	CCGCCCCGTCCCCCTCCCAGACCAGCAGAGGCAGCAGCCGG
Motif Score	2.876744048
Cell/Tissue List	HeLa; HepG2; U2OS; A549
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000359282.9; ENST00000547717.1; ENST00000447282.5; ENST00000437231.5
External Link	RMBase: m6A_site_190301
mod ID: M6ASITE012815		Click to Show/Hide the Full List
mod site	chr12:53452818-53452819:+		[5]
Sequence	CAGCGCCCCCCCCCGACCGAACCGTTTATTTTTTCCCCCCT
Motif Score	2.930744048
Cell/Tissue List	HeLa; A549; U2OS; H1B; H1A; LCLs; MT4; MM6; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000552296.6; ENST00000549863.5; ENST00000447282.5; ENST00000550192.5; ENST00000359462.9; ENST00000547717.1; ENST00000437231.5; ENST00000359282.9; ENST00000550520.6; ENST00000546463.5
External Link	RMBase: m6A_site_190302
mod ID: M6ASITE012816		Click to Show/Hide the Full List
mod site	chr12:53454758-53454759:+		[6]
Sequence	CCCCCAACCAGTGACCAAAGACTTGACCACTCAAAGTCCAG
Motif Score	3.319380952
Cell/Tissue List	HepG2; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000359462.9; ENST00000552819.5; ENST00000550192.5; ENST00000550910.1; ENST00000552296.6; ENST00000552980.6; ENST00000551104.5; ENST00000447282.5; ENST00000455667.7; ENST00000547717.1; ENST00000549863.5; ENST00000437231.5; ENST00000546463.5; ENST00000550520.6; ENST00000359282.9
External Link	RMBase: m6A_site_190303
mod ID: M6ASITE012817		Click to Show/Hide the Full List
mod site	chr12:53454788-53454789:+		[7]
Sequence	TCAAAGTCCAGCTCCCCAGAACACTGCTCGACATGGACACC
Motif Score	2.951386905
Cell/Tissue List	hESC-HEK293T; HepG2
Seq Type List	MAZTER-seq; m6A-seq
Transcript ID List	ENST00000549863.5; ENST00000439930.7; ENST00000552819.5; ENST00000359462.9; ENST00000547717.1; ENST00000552980.6; ENST00000447282.5; ENST00000550520.6; ENST00000550910.1; ENST00000455667.7; ENST00000359282.9; ENST00000551104.5; ENST00000552296.6; ENST00000546463.5; ENST00000437231.5; ENST00000548933.5; ENST00000550192.5
External Link	RMBase: m6A_site_190304
mod ID: M6ASITE012818		Click to Show/Hide the Full List
mod site	chr12:53454804-53454805:+		[7]
Sequence	CAGAACACTGCTCGACATGGACACCGGTGTGATTGAAGGTG
Motif Score	3.643047619
Cell/Tissue List	hESC-HEK293T; HepG2
Seq Type List	MAZTER-seq; m6A-seq
Transcript ID List	ENST00000551104.5; ENST00000359462.9; ENST00000552819.5; ENST00000550520.6; ENST00000552296.6; ENST00000439930.7; ENST00000549863.5; ENST00000547717.1; ENST00000359282.9; ENST00000548933.5; ENST00000550910.1; ENST00000546463.5; ENST00000437231.5; ENST00000550192.5; ENST00000552980.6; ENST00000447282.5; ENST00000455667.7
External Link	RMBase: m6A_site_190305
mod ID: M6ASITE012819		Click to Show/Hide the Full List
mod site	chr12:53454853-53454854:+		[8]
Sequence	GTCACTCTCACCATCCGGCTACTTATGCATGGAAAGGTATG
Motif Score	2.500660714
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000359462.9; ENST00000439930.7; ENST00000437231.5; ENST00000552980.6; ENST00000550192.5; ENST00000550520.6; ENST00000551104.5; ENST00000552819.5; ENST00000552296.6; ENST00000550910.1; ENST00000359282.9; ENST00000549863.5; ENST00000447282.5; ENST00000547717.1; ENST00000548933.5; ENST00000546652.6; ENST00000546463.5; ENST00000455667.7
External Link	RMBase: m6A_site_190306
mod ID: M6ASITE012820		Click to Show/Hide the Full List
mod site	chr12:53455375-53455376:+		[6]
Sequence	AGTATCATCGGAAAGGTAAGACAATTTCACTTCAACTTCAA
Motif Score	2.897386905
Cell/Tissue List	HepG2
Seq Type List	m6A-seq
Transcript ID List	ENST00000549863.5; ENST00000437231.5; ENST00000552980.6; ENST00000447282.5; ENST00000562264.5; ENST00000455667.7; ENST00000550192.5; ENST00000439930.7; ENST00000546463.5; ENST00000359282.9; ENST00000551104.5; ENST00000552296.6; ENST00000552819.5; ENST00000548933.5; ENST00000547717.1; ENST00000546652.6; ENST00000550520.6; ENST00000550910.1; ENST00000359462.9
External Link	RMBase: m6A_site_190307
mod ID: M6ASITE012821		Click to Show/Hide the Full List
mod site	chr12:53455900-53455901:+		[7]
Sequence	CTAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATTGTC
Motif Score	2.173910714
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000546463.5; ENST00000550192.5; ENST00000552296.6; ENST00000562264.5; ENST00000455667.7; ENST00000551104.5; ENST00000546652.6; ENST00000549863.5; ENST00000439930.7; ENST00000359462.9; ENST00000550520.6; ENST00000437231.5; ENST00000359282.9; ENST00000547717.1; ENST00000550910.1; ENST00000447282.5; ENST00000548933.5; ENST00000552819.5
External Link	RMBase: m6A_site_190308
mod ID: M6ASITE012822		Click to Show/Hide the Full List
mod site	chr12:53455987-53455988:+		[8]
Sequence	AGCCTTTGCTATGATCATTGACAAACTGGAAGAGGTTTGTT
Motif Score	2.859755952
Cell/Tissue List	HEK293T; hESC-HEK293T
Seq Type List	DART-seq; MAZTER-seq
Transcript ID List	ENST00000552296.6; ENST00000551104.5; ENST00000552819.5; ENST00000359282.9; ENST00000437231.5; ENST00000359462.9; ENST00000547717.1; ENST00000550910.1; ENST00000546463.5; ENST00000546652.6; ENST00000447282.5; ENST00000550520.6; ENST00000439930.7; ENST00000548933.5; ENST00000455667.7; ENST00000550585.5; ENST00000549863.5; ENST00000548190.1; ENST00000562264.5
External Link	RMBase: m6A_site_190309
mod ID: M6ASITE012823		Click to Show/Hide the Full List
mod site	chr12:53455991-53455992:+		[8]
Sequence	TTTGCTATGATCATTGACAAACTGGAAGAGGTTTGTTGTCT
Motif Score	2.627720238
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000552819.5; ENST00000549863.5; ENST00000550585.5; ENST00000548933.5; ENST00000455667.7; ENST00000359282.9; ENST00000546463.5; ENST00000551104.5; ENST00000547717.1; ENST00000439930.7; ENST00000447282.5; ENST00000437231.5; ENST00000550910.1; ENST00000548190.1; ENST00000562264.5; ENST00000550520.6; ENST00000359462.9; ENST00000546652.6; ENST00000552296.6
External Link	RMBase: m6A_site_190310
mod ID: M6ASITE012824		Click to Show/Hide the Full List
mod site	chr12:53459312-53459313:+		[6]
Sequence	AATAGCACAGCTGCCAGTAGACCCCCGGTCACCCTGAGGCT
Motif Score	2.876744048
Cell/Tissue List	HepG2
Seq Type List	m6A-seq
Transcript ID List	ENST00000562264.5; ENST00000439930.7; ENST00000447282.5; ENST00000547717.1; ENST00000552819.5; ENST00000437231.5; ENST00000359282.9; ENST00000546463.5; ENST00000359462.9; ENST00000548933.5; ENST00000550520.6; ENST00000552296.6; ENST00000546652.6; ENST00000551104.5; ENST00000548190.1; ENST00000455667.7; ENST00000549863.5; ENST00000550585.5
External Link	RMBase: m6A_site_190311
mod ID: M6ASITE012825		Click to Show/Hide the Full List
mod site	chr12:53459839-53459840:+		[6]
Sequence	TCATGGCTCACTGCAGCAAAACATCGACCTTCCCAGCCTCA
Motif Score	2.20572619
Cell/Tissue List	HepG2
Seq Type List	m6A-seq
Transcript ID List	ENST00000447282.5; ENST00000550520.6; ENST00000551104.5; ENST00000546652.6; ENST00000552819.5; ENST00000437231.5; ENST00000546463.5; ENST00000548933.5; ENST00000359282.9; ENST00000439930.7; ENST00000548190.1; ENST00000549863.5; ENST00000552296.6; ENST00000562264.5; ENST00000550585.5; ENST00000359462.9; ENST00000547987.2; ENST00000455667.7; ENST00000547717.1
External Link	RMBase: m6A_site_190312
mod ID: M6ASITE012826		Click to Show/Hide the Full List
mod site	chr12:53460724-53460725:+		[9]
Sequence	GCTTTTGCTTCGCCCAGAGAACTATCATTAGTTGAAAGGCA
Motif Score	3.373380952
Cell/Tissue List	CD34
Seq Type List	m6A-seq
Transcript ID List	ENST00000547987.2; ENST00000439930.7; ENST00000549863.5; ENST00000546652.6; ENST00000437231.5; ENST00000359282.9; ENST00000552819.5; ENST00000547717.1; ENST00000548933.5; ENST00000562264.5; ENST00000550585.5; ENST00000359462.9; ENST00000550520.6; ENST00000552296.6; ENST00000455667.7; ENST00000447282.5; ENST00000546463.5; ENST00000551104.5
External Link	RMBase: m6A_site_190313
mod ID: M6ASITE012827		Click to Show/Hide the Full List
mod site	chr12:53460758-53460759:+		[5]
Sequence	AAAGGCAACTATTTAGAAGGACCTTTTGCTTGAGAGTAGGT
Motif Score	3.622404762
Cell/Tissue List	HeLa; CD34
Seq Type List	m6A-seq
Transcript ID List	ENST00000550520.6; ENST00000546652.6; ENST00000548933.5; ENST00000552819.5; ENST00000550585.5; ENST00000549863.5; ENST00000547717.1; ENST00000437231.5; ENST00000562264.5; ENST00000447282.5; ENST00000552296.6; ENST00000546463.5; ENST00000455667.7; ENST00000551104.5; ENST00000359462.9; ENST00000439930.7; ENST00000547987.2; ENST00000359282.9
External Link	RMBase: m6A_site_190314
mod ID: M6ASITE012828		Click to Show/Hide the Full List
mod site	chr12:53460851-53460852:+		[5]
Sequence	TTTTAACTCTAATTCACTAAACAGTCCTATCTGGAATAAGG
Motif Score	2.20572619
Cell/Tissue List	HeLa; CD34
Seq Type List	m6A-seq
Transcript ID List	ENST00000439930.7; ENST00000359462.9; ENST00000550585.5; ENST00000552819.5; ENST00000546463.5; ENST00000547717.1; ENST00000455667.7; ENST00000547987.2; ENST00000550520.6; ENST00000447282.5; ENST00000549863.5; ENST00000546652.6; ENST00000437231.5; ENST00000359282.9; ENST00000562264.5; ENST00000548933.5; ENST00000552296.6; ENST00000551104.5
External Link	RMBase: m6A_site_190315
mod ID: M6ASITE012829		Click to Show/Hide the Full List
mod site	chr12:53460882-53460883:+		[9]
Sequence	TGGAATAAGGGAAGAGTGGGACAAAGAACAAAAAGGGAAGA
Motif Score	3.643047619
Cell/Tissue List	CD34
Seq Type List	m6A-seq
Transcript ID List	ENST00000549863.5; ENST00000359462.9; ENST00000547987.2; ENST00000550520.6; ENST00000548933.5; ENST00000551104.5; ENST00000552296.6; ENST00000546652.6; ENST00000359282.9; ENST00000546463.5; ENST00000562264.5; ENST00000439930.7; ENST00000437231.5; ENST00000455667.7; ENST00000447282.5; ENST00000550585.5; ENST00000547717.1; ENST00000552819.5
External Link	RMBase: m6A_site_190316
mod ID: M6ASITE012830		Click to Show/Hide the Full List
mod site	chr12:53460889-53460890:+		[9]
Sequence	AGGGAAGAGTGGGACAAAGAACAAAAAGGGAAGATTGGAAA
Motif Score	2.951386905
Cell/Tissue List	CD34
Seq Type List	m6A-seq
Transcript ID List	ENST00000550585.5; ENST00000447282.5; ENST00000562264.5; ENST00000546652.6; ENST00000546463.5; ENST00000439930.7; ENST00000455667.7; ENST00000547987.2; ENST00000548933.5; ENST00000551104.5; ENST00000552296.6; ENST00000547717.1; ENST00000552819.5; ENST00000437231.5; ENST00000359462.9; ENST00000359282.9; ENST00000550520.6; ENST00000549863.5
External Link	RMBase: m6A_site_190317
mod ID: M6ASITE012831		Click to Show/Hide the Full List
mod site	chr12:53460974-53460975:+		[6]
Sequence	GAGGAATTGGAAGAGCATGAACTGTTTTTCTCTGATTTTGA
Motif Score	3.373380952
Cell/Tissue List	HepG2
Seq Type List	m6A-seq
Transcript ID List	ENST00000455667.7; ENST00000437231.5; ENST00000547987.2; ENST00000447282.5; ENST00000550585.5; ENST00000548933.5; ENST00000552819.5; ENST00000551104.5; ENST00000439930.7; ENST00000549863.5; ENST00000550520.6; ENST00000562264.5; ENST00000546463.5; ENST00000547717.1; ENST00000546652.6; ENST00000359282.9; ENST00000359462.9; ENST00000552296.6
External Link	RMBase: m6A_site_190318
mod ID: M6ASITE012832		Click to Show/Hide the Full List
mod site	chr12:53461094-53461095:+		[7]
Sequence	ATCACTATTGCTGGCATTCCACAATCCATCATTGAGTGTGT
Motif Score	2.053113095
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000455667.7; ENST00000439930.7; ENST00000547987.2; ENST00000552819.5; ENST00000447282.5; ENST00000546652.6; ENST00000359282.9; ENST00000551104.5; ENST00000550520.6; ENST00000359462.9; ENST00000550585.5; ENST00000546463.5; ENST00000553064.6; ENST00000437231.5; ENST00000547717.1; ENST00000562264.5; ENST00000549863.5; ENST00000552296.6; ENST00000548933.5
External Link	RMBase: m6A_site_190319
mod ID: M6ASITE012833		Click to Show/Hide the Full List
mod site	chr12:53461118-53461119:+		[6]
Sequence	TCCATCATTGAGTGTGTCAAACAGATCTGCGTGGTCATGTT
Motif Score	2.20572619
Cell/Tissue List	HepG2; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000439930.7; ENST00000553064.6; ENST00000455667.7; ENST00000562264.5; ENST00000552296.6; ENST00000359462.9; ENST00000552819.5; ENST00000437231.5; ENST00000359282.9; ENST00000550585.5; ENST00000548933.5; ENST00000550520.6; ENST00000549863.5; ENST00000546463.5; ENST00000547987.2; ENST00000447282.5; ENST00000546652.6; ENST00000547717.1
External Link	RMBase: m6A_site_190320
mod ID: M6ASITE012834		Click to Show/Hide the Full List
mod site	chr12:53464734-53464735:+		[5]
Sequence	CCGGATTGACAGCCCTGGAGACTGAAATCCTCTATTTATCC
Motif Score	3.319380952
Cell/Tissue List	HeLa; HepG2; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000552296.6; ENST00000455667.7; ENST00000359282.9; ENST00000546652.6; ENST00000550585.5; ENST00000439930.7; ENST00000552819.5; ENST00000549272.1; ENST00000562264.5; ENST00000547987.2; ENST00000547717.1; ENST00000548933.5; ENST00000437231.5; ENST00000546463.5; ENST00000447282.5; ENST00000612963.1; ENST00000547859.2; ENST00000359462.9; ENST00000634357.1; ENST00000549863.5; ENST00000553064.6
External Link	RMBase: m6A_site_190321
mod ID: M6ASITE012835		Click to Show/Hide the Full List
mod site	chr12:53464760-53464761:+		[5]
Sequence	ATCCTCTATTTATCCACAGGACAGGTACAGCACAGGCAGCG
Motif Score	3.643047619
Cell/Tissue List	HeLa; HepG2; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000359282.9; ENST00000634357.1; ENST00000547859.2; ENST00000549863.5; ENST00000549272.1; ENST00000439930.7; ENST00000546652.6; ENST00000612963.1; ENST00000548933.5; ENST00000553064.6; ENST00000552296.6; ENST00000359462.9; ENST00000550585.5; ENST00000437231.5; ENST00000552819.5; ENST00000546463.5; ENST00000562264.5; ENST00000447282.5; ENST00000547987.2; ENST00000455667.7; ENST00000547717.1
External Link	RMBase: m6A_site_190322
mod ID: M6ASITE012836		Click to Show/Hide the Full List
mod site	chr12:53464799-53464800:+		[10]
Sequence	CGACAGTGCGAGCTTTCCCCACACCACCCCGTCCATGTGCC
Motif Score	2.053113095
Cell/Tissue List	brain; hESC-HEK293T
Seq Type List	m6A-REF-seq; MAZTER-seq
Transcript ID List	ENST00000549863.5; ENST00000548933.5; ENST00000546463.5; ENST00000547859.2; ENST00000359462.9; ENST00000359282.9; ENST00000553064.6; ENST00000546652.6; ENST00000562264.5; ENST00000612963.1; ENST00000552819.5; ENST00000439930.7; ENST00000550585.5; ENST00000547717.1; ENST00000447282.5; ENST00000552296.6; ENST00000455667.7; ENST00000547987.2; ENST00000549272.1; ENST00000437231.5; ENST00000634357.1
External Link	RMBase: m6A_site_190323
mod ID: M6ASITE012837		Click to Show/Hide the Full List
mod site	chr12:53464839-53464840:+		[5]
Sequence	CTCAACCCTGACCTGGAGGGACCACCTCTAGAGGTGAGAGG
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000552819.5; ENST00000437231.5; ENST00000552296.6; ENST00000439930.7; ENST00000549272.1; ENST00000612963.1; ENST00000549863.5; ENST00000547859.2; ENST00000546652.6; ENST00000359462.9; ENST00000553064.6; ENST00000634357.1; ENST00000547717.1; ENST00000359282.9; ENST00000548933.5; ENST00000550585.5; ENST00000447282.5; ENST00000562264.5; ENST00000547987.2; ENST00000455667.7; ENST00000546463.5
External Link	RMBase: m6A_site_190324
mod ID: M6ASITE012838		Click to Show/Hide the Full List
mod site	chr12:53464907-53464908:+		[5]
Sequence	ATCCTTCCGCCTCAGCCGAGACTGCCAACACACGGGGGGCC
Motif Score	3.319380952
Cell/Tissue List	HeLa; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000546463.5; ENST00000359282.9; ENST00000547859.2; ENST00000447282.5; ENST00000550585.5; ENST00000359462.9; ENST00000546652.6; ENST00000552819.5; ENST00000553064.6; ENST00000549863.5; ENST00000552296.6; ENST00000548933.5; ENST00000634357.1; ENST00000562264.5; ENST00000437231.5; ENST00000439930.7; ENST00000547987.2; ENST00000549272.1; ENST00000547717.1; ENST00000455667.7
External Link	RMBase: m6A_site_190325
mod ID: M6ASITE012839		Click to Show/Hide the Full List
mod site	chr12:53465948-53465949:+		[7]
Sequence	TAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCC
Motif Score	3.643047619
Cell/Tissue List	hESC-HEK293T; HepG2; Huh7
Seq Type List	MAZTER-seq; m6A-seq; MeRIP-seq
Transcript ID List	ENST00000550585.5; ENST00000547859.2; ENST00000359282.9; ENST00000552819.5; ENST00000455667.7; ENST00000447282.5; ENST00000547987.2; ENST00000562264.5; ENST00000548933.5; ENST00000547717.1; ENST00000549272.1; ENST00000359462.9; ENST00000552296.6; ENST00000546463.5; ENST00000439930.7; ENST00000437231.5; ENST00000546652.6; ENST00000553064.6; ENST00000549863.5
External Link	RMBase: m6A_site_190326
mod ID: M6ASITE012840		Click to Show/Hide the Full List
mod site	chr12:53465963-53465964:+		[10]
Sequence	CAAGGACAGTATGCCATTCCACAGCCAGATGTAAGTTTTGT
Motif Score	2.053113095
Cell/Tissue List	brain
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000548933.5; ENST00000447282.5; ENST00000455667.7; ENST00000437231.5; ENST00000552296.6; ENST00000549272.1; ENST00000546463.5; ENST00000550585.5; ENST00000547717.1; ENST00000359462.9; ENST00000546652.6; ENST00000552819.5; ENST00000553064.6; ENST00000547859.2; ENST00000549863.5; ENST00000547987.2; ENST00000562264.5; ENST00000359282.9; ENST00000439930.7
External Link	RMBase: m6A_site_190327
mod ID: M6ASITE012841		Click to Show/Hide the Full List
mod site	chr12:53467249-53467250:+		[10]
Sequence	CTGCACCAGTTGGCAATGCAACAGTCTCATTTTCCCATGAC
Motif Score	2.173910714
Cell/Tissue List	liver
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000562264.5; ENST00000552296.6; ENST00000547717.1; ENST00000550585.5; ENST00000546463.5; ENST00000455667.7; ENST00000546652.6; ENST00000547859.2; ENST00000447282.5; ENST00000359462.9; ENST00000547987.2; ENST00000552819.5; ENST00000549863.5; ENST00000359282.9; ENST00000548933.5; ENST00000549272.1; ENST00000439930.7; ENST00000437231.5; ENST00000553064.6
External Link	RMBase: m6A_site_190328
mod ID: M6ASITE012842		Click to Show/Hide the Full List
mod site	chr12:53467278-53467279:+		[7]
Sequence	TTTTCCCATGACGCATGGCAACACCGGATTCAGTGGTATGG
Motif Score	2.173910714
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000547717.1; ENST00000549272.1; ENST00000437231.5; ENST00000549863.5; ENST00000552296.6; ENST00000439930.7; ENST00000548933.5; ENST00000546652.6; ENST00000550585.5; ENST00000359282.9; ENST00000447282.5; ENST00000546463.5; ENST00000455667.7; ENST00000547859.2; ENST00000553064.6; ENST00000552819.5; ENST00000562264.5; ENST00000547987.2; ENST00000359462.9
External Link	RMBase: m6A_site_190329
mod ID: M6ASITE012843		Click to Show/Hide the Full List
mod site	chr12:53467770-53467771:+		[11]
Sequence	TCCGATAGGGTTAGGATGAGACCACCAAACTCATTTTCACT
Motif Score	2.876744048
Cell/Tissue List	Huh7
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000437231.5; ENST00000562264.5; ENST00000439930.7; ENST00000547859.2; ENST00000550585.5; ENST00000359462.9; ENST00000553064.6; ENST00000447282.5; ENST00000455667.7; ENST00000547048.5; ENST00000552296.6; ENST00000548933.5; ENST00000552819.5; ENST00000546463.5; ENST00000359282.9; ENST00000549863.5
External Link	RMBase: m6A_site_190330
mod ID: M6ASITE012844		Click to Show/Hide the Full List
mod site	chr12:53467778-53467779:+		[11]
Sequence	GGTTAGGATGAGACCACCAAACTCATTTTCACTTGTATCTT
Motif Score	2.627720238
Cell/Tissue List	Huh7
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000552819.5; ENST00000549863.5; ENST00000546463.5; ENST00000359282.9; ENST00000553064.6; ENST00000547048.5; ENST00000547859.2; ENST00000455667.7; ENST00000562264.5; ENST00000552296.6; ENST00000548933.5; ENST00000439930.7; ENST00000447282.5; ENST00000437231.5; ENST00000359462.9; ENST00000550585.5
External Link	RMBase: m6A_site_190331
mod ID: M6ASITE012845		Click to Show/Hide the Full List
mod site	chr12:53467894-53467895:+		[11]
Sequence	TTCTACTGTTATATTAATAAACTGGTGGGAGTCTTGTTTCA
Motif Score	2.627720238
Cell/Tissue List	Huh7
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000547048.5; ENST00000359462.9; ENST00000550585.5; ENST00000455667.7; ENST00000548933.5; ENST00000546463.5; ENST00000437231.5; ENST00000439930.7; ENST00000447282.5; ENST00000552296.6; ENST00000359282.9; ENST00000552819.5; ENST00000553064.6; ENST00000549863.5; ENST00000562264.5; ENST00000547859.2
External Link	RMBase: m6A_site_190332
mod ID: M6ASITE012846		Click to Show/Hide the Full List
mod site	chr12:53467925-53467926:+		[11]
Sequence	TCTTGTTTCACTGCCCATGAACCATACCAGCAACATGCACA
Motif Score	2.930744048
Cell/Tissue List	Huh7
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000547859.2; ENST00000359462.9; ENST00000553064.6; ENST00000437231.5; ENST00000562264.5; ENST00000447282.5; ENST00000552819.5; ENST00000548933.5; ENST00000455667.7; ENST00000552296.6; ENST00000547048.5; ENST00000550585.5; ENST00000439930.7; ENST00000546463.5; ENST00000549863.5; ENST00000359282.9
External Link	RMBase: m6A_site_190333
mod ID: M6ASITE012847		Click to Show/Hide the Full List
mod site	chr12:53468427-53468428:+		[12]
Sequence	CAGGTGAGATACAATTTGGAACACAACAGGAAAGGGGTAGA
Motif Score	2.951386905
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000447282.5; ENST00000359282.9; ENST00000553064.6; ENST00000437231.5; ENST00000546463.5; ENST00000550585.5; ENST00000359462.9; ENST00000552819.5; ENST00000548933.5; ENST00000552296.6; ENST00000562264.5; ENST00000439930.7; ENST00000455667.7; ENST00000547859.2; ENST00000547048.5; ENST00000549863.5
External Link	RMBase: m6A_site_190334
mod ID: M6ASITE012848		Click to Show/Hide the Full List
mod site	chr12:53468459-53468460:+		[12]
Sequence	AGGGGTAGAAGTACAGAAGGACTTGTTTAGACATTGGTCCT
Motif Score	4.065041667
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000552819.5; ENST00000447282.5; ENST00000546463.5; ENST00000552296.6; ENST00000359462.9; ENST00000547048.5; ENST00000548933.5; ENST00000562264.5; ENST00000359282.9; ENST00000547859.2; ENST00000439930.7; ENST00000437231.5; ENST00000455667.7; ENST00000550585.5; ENST00000549863.5; ENST00000553064.6
External Link	RMBase: m6A_site_190335
mod ID: M6ASITE012849		Click to Show/Hide the Full List
mod site	chr12:53468469-53468470:+		[12]
Sequence	GTACAGAAGGACTTGTTTAGACATTGGTCCTTTTTGAGGAT
Motif Score	2.897386905
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000447282.5; ENST00000547859.2; ENST00000549863.5; ENST00000548933.5; ENST00000359462.9; ENST00000437231.5; ENST00000550585.5; ENST00000552819.5; ENST00000550733.1; ENST00000547048.5; ENST00000552296.6; ENST00000359282.9; ENST00000553064.6; ENST00000455667.7; ENST00000562264.5; ENST00000546463.5; ENST00000439930.7
External Link	RMBase: m6A_site_190336
mod ID: M6ASITE012850		Click to Show/Hide the Full List
mod site	chr12:53468799-53468800:+		[8]
Sequence	GTTTGGATGCATCTGCTCAGACTACTTCTCATGAACTCACC
Motif Score	3.319380952
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000547859.2; ENST00000552819.5; ENST00000552296.6; ENST00000553064.6; ENST00000548933.5; ENST00000550733.1; ENST00000359462.9; ENST00000562264.5; ENST00000549863.5; ENST00000546463.5; ENST00000439930.7; ENST00000359282.9; ENST00000550585.5; ENST00000437231.5; ENST00000447282.5; ENST00000547048.5; ENST00000455667.7
External Link	RMBase: m6A_site_190337
mod ID: M6ASITE012851		Click to Show/Hide the Full List
mod site	chr12:53468813-53468814:+		[8]
Sequence	GCTCAGACTACTTCTCATGAACTCACCATTCCAAACGATGT
Motif Score	3.373380952
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000437231.5; ENST00000547048.5; ENST00000439930.7; ENST00000550733.1; ENST00000549863.5; ENST00000562264.5; ENST00000447282.5; ENST00000553064.6; ENST00000359282.9; ENST00000552296.6; ENST00000548933.5; ENST00000550585.5; ENST00000359462.9; ENST00000546463.5; ENST00000455667.7; ENST00000547859.2; ENST00000552819.5
External Link	RMBase: m6A_site_190338
mod ID: M6ASITE012852		Click to Show/Hide the Full List
mod site	chr12:53475004-53475005:+		[5]
Sequence	CCTCGCTCGCCACAGCGGGGACCTCCGACGCACCCTCCAGC
Motif Score	3.622404762
Cell/Tissue List	HeLa; Huh7; Jurkat
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000552819.5; ENST00000359462.9; ENST00000455667.7; ENST00000553064.6; ENST00000437231.5; ENST00000550733.1; ENST00000447282.5; ENST00000547048.5; ENST00000439930.7; ENST00000359282.9; ENST00000548933.5; ENST00000549863.5; ENST00000546463.5; ENST00000550585.5; ENST00000562264.5; ENST00000547859.2; ENST00000552296.6
External Link	RMBase: m6A_site_190339
mod ID: M6ASITE012853		Click to Show/Hide the Full List
mod site	chr12:53475078-53475079:+		[5]
Sequence	TCCAGTCTGCTTGGCATGAAACCCATCCCTCTCCTGGCTCT
Motif Score	2.185083333
Cell/Tissue List	HeLa; HepG2; HEK293T; Huh7; Jurkat
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000553064.6; ENST00000359462.9; ENST00000550733.1; ENST00000447282.5; ENST00000552296.6; ENST00000550585.5; ENST00000546463.5; ENST00000547048.5; ENST00000359282.9; ENST00000439930.7; ENST00000552819.5; ENST00000549863.5; ENST00000547859.2; ENST00000562264.5; ENST00000437231.5; ENST00000455667.7; ENST00000548933.5
External Link	RMBase: m6A_site_190340
mod ID: M6ASITE012854		Click to Show/Hide the Full List
mod site	chr12:53475180-53475181:+		[5]
Sequence	GTGCCATGTGTAACTAACAAACTGAAAGGCGAGAAACAGAG
Motif Score	2.627720238
Cell/Tissue List	HeLa; HEK293T; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000546463.5; ENST00000439930.7; ENST00000548933.5; ENST00000562264.5; ENST00000552819.5; ENST00000547859.2; ENST00000359462.9; ENST00000550733.1; ENST00000550585.5; ENST00000549863.5; ENST00000547048.5; ENST00000455667.7; ENST00000447282.5; ENST00000437231.5; ENST00000359282.9; ENST00000552296.6; ENST00000553064.6
External Link	RMBase: m6A_site_190341
mod ID: M6ASITE012855		Click to Show/Hide the Full List
mod site	chr12:53475195-53475196:+		[5]
Sequence	AACAAACTGAAAGGCGAGAAACAGAGATTCTCTCCCTACTG
Motif Score	2.20572619
Cell/Tissue List	HeLa; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000455667.7; ENST00000550733.1; ENST00000552819.5; ENST00000549863.5; ENST00000547859.2; ENST00000447282.5; ENST00000548933.5; ENST00000553064.6; ENST00000439930.7; ENST00000359462.9; ENST00000546463.5; ENST00000437231.5; ENST00000547048.5; ENST00000550585.5; ENST00000562264.5; ENST00000359282.9; ENST00000552296.6
External Link	RMBase: m6A_site_190342
mod ID: M6ASITE012856		Click to Show/Hide the Full List
mod site	chr12:53475276-53475277:+		[8]
Sequence	CATTTTGTTTTCCTTTGTTAACATTGGTGAGAATGAAACTA
Motif Score	2.168095238
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000547048.5; ENST00000546463.5; ENST00000553064.6; ENST00000562264.5; ENST00000552819.5; ENST00000439930.7; ENST00000549863.5; ENST00000550733.1; ENST00000447282.5; ENST00000552296.6; ENST00000550585.5; ENST00000359462.9; ENST00000359282.9; ENST00000548933.5; ENST00000547859.2; ENST00000455667.7; ENST00000437231.5
External Link	RMBase: m6A_site_190343
mod ID: M6ASITE012857		Click to Show/Hide the Full List
mod site	chr12:53475293-53475294:+		[8]
Sequence	TTAACATTGGTGAGAATGAAACTATTGTGAGCTTGTTACCG
Motif Score	2.627720238
Cell/Tissue List	HEK293T; Huh7
Seq Type List	DART-seq; MeRIP-seq
Transcript ID List	ENST00000447282.5; ENST00000439930.7; ENST00000359282.9; ENST00000562264.5; ENST00000550585.5; ENST00000550733.1; ENST00000547048.5; ENST00000455667.7; ENST00000553064.6; ENST00000548933.5; ENST00000547859.2; ENST00000549863.5; ENST00000552296.6; ENST00000546463.5; ENST00000359462.9; ENST00000552819.5; ENST00000437231.5
External Link	RMBase: m6A_site_190344
mod ID: M6ASITE012858		Click to Show/Hide the Full List
mod site	chr12:53479443-53479444:+		[5]
Sequence	TGGCATGGGGAGCAGCTAGAACAATGCAGATTCATCCATAA
Motif Score	2.951386905
Cell/Tissue List	HeLa; hESC-HEK293T; AML
Seq Type List	m6A-seq; MAZTER-seq; miCLIP
Transcript ID List	ENST00000550585.5; ENST00000447282.5; ENST00000550733.1; ENST00000455667.7; ENST00000546463.5; ENST00000552296.6; ENST00000437231.5; ENST00000562264.5; ENST00000549863.5; ENST00000552819.5; ENST00000439930.7; ENST00000547048.5; ENST00000359282.9; ENST00000548933.5; ENST00000359462.9; ENST00000547859.2
External Link	RMBase: m6A_site_190345
mod ID: M6ASITE012859		Click to Show/Hide the Full List
mod site	chr12:53479514-53479515:+		[5]
Sequence	TCCATCTGTGTAGTTTCTGAACAGTCAGCGATTCCAGGTTT
Motif Score	2.951386905
Cell/Tissue List	HeLa; HEK293T
Seq Type List	m6A-seq; DART-seq
Transcript ID List	ENST00000359462.9; ENST00000552819.5; ENST00000548933.5; ENST00000547859.2; ENST00000552296.6; ENST00000546463.5; ENST00000562264.5; ENST00000455667.7; ENST00000547048.5; ENST00000447282.5; ENST00000439930.7; ENST00000437231.5; ENST00000550733.1; ENST00000359282.9; ENST00000549863.5; ENST00000550585.5
External Link	RMBase: m6A_site_190346
mod ID: M6ASITE012860		Click to Show/Hide the Full List
mod site	chr12:53479562-53479563:+		[8]
Sequence	TTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCG
Motif Score	2.078666667
Cell/Tissue List	HEK293T; hESC-HEK293T
Seq Type List	DART-seq; MAZTER-seq
Transcript ID List	ENST00000546463.5; ENST00000437231.5; ENST00000547048.5; ENST00000552819.5; ENST00000552296.6; ENST00000549863.5; ENST00000447282.5; ENST00000547859.2; ENST00000359462.9; ENST00000548933.5; ENST00000550585.5; ENST00000550733.1; ENST00000455667.7; ENST00000359282.9; ENST00000439930.7; ENST00000562264.5
External Link	RMBase: m6A_site_190347
mod ID: M6ASITE012861		Click to Show/Hide the Full List
mod site	chr12:53479578-53479579:+		[8]
Sequence	TTCTACACACTTTATCATCCACTCGTGATTTTTTAATTAAA
Motif Score	2.475107143
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000562264.5; ENST00000549863.5; ENST00000547859.2; ENST00000552296.6; ENST00000552819.5; ENST00000455667.7; ENST00000547048.5; ENST00000550733.1; ENST00000437231.5; ENST00000439930.7; ENST00000548933.5; ENST00000550585.5; ENST00000447282.5; ENST00000359462.9; ENST00000359282.9; ENST00000546463.5
External Link	RMBase: m6A_site_190348
mod ID: M6ASITE012862		Click to Show/Hide the Full List
mod site	chr12:53479734-53479735:+		[7]
Sequence	TGTAAGAGTGGAATATTAATACATTTCAGTTTAGTTCTGTA
Motif Score	2.110482143
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000550585.5; ENST00000447282.5; ENST00000547859.2; ENST00000437231.5; ENST00000359282.9; ENST00000552819.5; ENST00000547048.5; ENST00000549863.5; ENST00000359462.9; ENST00000455667.7
External Link	RMBase: m6A_site_190350
mod ID: M6ASITE012863		Click to Show/Hide the Full List
mod site	chr12:53479789-53479790:+		[5]
Sequence	TCAAAAAAATTAAAAGATGGACTGGAGCTTTTTCTTTGTGA
Motif Score	4.065041667
Cell/Tissue List	HeLa; HEK293T; Huh7; peripheral-blood
Seq Type List	m6A-seq; DART-seq; MeRIP-seq
Transcript ID List	ENST00000359462.9; ENST00000547859.2; ENST00000550585.5; ENST00000437231.5; ENST00000552819.5; ENST00000547048.5; ENST00000447282.5; ENST00000455667.7; ENST00000359282.9
External Link	RMBase: m6A_site_190353
mod ID: M6ASITE012864		Click to Show/Hide the Full List
mod site	chr12:53479816-53479817:+		[5]
Sequence	CTTTTTCTTTGTGAATAGAAACTGGATGCCACAGTGATTCA
Motif Score	2.627720238
Cell/Tissue List	HeLa; Huh7; peripheral-blood
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000359462.9; ENST00000359282.9; ENST00000552819.5; ENST00000437231.5; ENST00000447282.5; ENST00000547048.5; ENST00000455667.7; ENST00000550585.5; ENST00000547859.2
External Link	RMBase: m6A_site_190354
mod ID: M6ASITE012865		Click to Show/Hide the Full List
mod site	chr12:53479894-53479895:+		[5]
Sequence	TACCTTTTATCCCTCAAAGGACCCTTCTTGGGTTTTGAATG
Motif Score	3.622404762
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000447282.5; ENST00000455667.7; ENST00000547859.2; ENST00000437231.5
External Link	RMBase: m6A_site_190357
mod ID: M6ASITE012866		Click to Show/Hide the Full List
mod site	chr12:53479998-53479999:+		[8]
Sequence	CTCGATCCTATTTTTCCCTGACTCCATGCTTGGTTGGCCCT
Motif Score	3.28175
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000547859.2; ENST00000447282.5; ENST00000437231.5; ENST00000455667.7
External Link	RMBase: m6A_site_190360
mod ID: M6ASITE012867		Click to Show/Hide the Full List
mod site	chr12:53480025-53480026:+		[5]
Sequence	GCTTGGTTGGCCCTTATAAAACTTGTGCCCAAAAGATTGAG
Motif Score	2.627720238
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000455667.7; ENST00000547859.2; ENST00000437231.5; ENST00000447282.5
External Link	RMBase: m6A_site_190361
mod ID: M6ASITE012868		Click to Show/Hide the Full List
mod site	chr12:53480052-53480053:+		[5]
Sequence	CCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGT
Motif Score	3.319380952
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000437231.5; ENST00000547859.2; ENST00000447282.5; ENST00000455667.7
External Link	RMBase: m6A_site_190362
mod ID: M6ASITE012869		Click to Show/Hide the Full List
mod site	chr12:53480067-53480068:+		[8]
Sequence	ATTAGACTTTCCGAGGACTTACCTGTCCTAGGGGAGTAGGC
Motif Score	2.052208333
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000437231.5; ENST00000547859.2; ENST00000455667.7; ENST00000447282.5
External Link	RMBase: m6A_site_190363
mod ID: M6ASITE012870		Click to Show/Hide the Full List
mod site	chr12:53480133-53480134:+		[8]
Sequence	GGGGAAAGGAATGACACATGACATACATGGCATACACATTA
Motif Score	2.859755952
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000447282.5; ENST00000547859.2; ENST00000437231.5; ENST00000455667.7
External Link	RMBase: m6A_site_190364
mod ID: M6ASITE012871		Click to Show/Hide the Full List
mod site	chr12:53480146-53480147:+		[8]
Sequence	ACACATGACATACATGGCATACACATTAAGCAGTTGATCAT
Motif Score	2.110482143
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000447282.5; ENST00000547859.2; ENST00000455667.7; ENST00000437231.5
External Link	RMBase: m6A_site_190365
mod ID: M6ASITE012872		Click to Show/Hide the Full List
mod site	chr12:53480231-53480232:+		[8]
Sequence	TTCAGGCTTGCATATTTTAAACTAAAAATTTCAGTCTATTG
Motif Score	2.627720238
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000547859.2; ENST00000447282.5; ENST00000455667.7; ENST00000437231.5
External Link	RMBase: m6A_site_190366
mod ID: M6ASITE012873		Click to Show/Hide the Full List
mod site	chr12:53480283-53480284:+		[8]
Sequence	TTCATTTATAGTCCTCCATAACAAGTTAGAAGGATGTATCT
Motif Score	2.168095238
Cell/Tissue List	HEK293T; hESC-HEK293T
Seq Type List	DART-seq; MAZTER-seq
Transcript ID List	ENST00000547859.2; ENST00000455667.7; ENST00000447282.5; ENST00000437231.5
External Link	RMBase: m6A_site_190367
mod ID: M6ASITE012874		Click to Show/Hide the Full List
mod site	chr12:53480344-53480345:+		[7]
Sequence	TTTTAGAAAGTTGGGGCTTGACATTATACTCATTTAGTGAG
Motif Score	2.859755952
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000455667.7; ENST00000547859.2; ENST00000447282.5; ENST00000437231.5
External Link	RMBase: m6A_site_190368
mod ID: M6ASITE012875		Click to Show/Hide the Full List
mod site	chr12:53480406-53480407:+		[7]
Sequence	GGGCAGGAGAACTTCTCCAGACACCTCAGATAAAGTCCGGA
Motif Score	2.897386905
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000547859.2; ENST00000437231.5; ENST00000447282.5; ENST00000455667.7
External Link	RMBase: m6A_site_190369
mod ID: M6ASITE012876		Click to Show/Hide the Full List
mod site	chr12:53480479-53480480:+		[5]
Sequence	CCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGCCTGC
Motif Score	2.185083333
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000447282.5; ENST00000547859.2; ENST00000437231.5; ENST00000455667.7
External Link	RMBase: m6A_site_190371
mod ID: M6ASITE012877		Click to Show/Hide the Full List
mod site	chr12:53480544-53480545:+		[5]
Sequence	TTCACAGGGGTTACAGTAGGACAGTCCCCACCCCAATCAGG
Motif Score	3.643047619
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000547859.2; ENST00000455667.7; ENST00000437231.5; ENST00000447282.5
External Link	RMBase: m6A_site_190373
mod ID: M6ASITE012878		Click to Show/Hide the Full List
mod site	chr12:53480584-53480585:+		[5]
Sequence	GCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTC
Motif Score	4.065041667
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000447282.5; ENST00000455667.7; ENST00000547859.2; ENST00000437231.5
External Link	RMBase: m6A_site_190375
mod ID: M6ASITE012879		Click to Show/Hide the Full List
mod site	chr12:53480590-53480591:+		[5]
Sequence	GGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGC
Motif Score	2.20572619
Cell/Tissue List	HeLa; HEK293T
Seq Type List	m6A-seq; DART-seq
Transcript ID List	ENST00000455667.7; ENST00000437231.5; ENST00000447282.5; ENST00000547859.2
External Link	RMBase: m6A_site_190376
mod ID: M6ASITE012880		Click to Show/Hide the Full List
mod site	chr12:53480621-53480622:+		[10]
Sequence	GTTCTTCAGCCTGAGCCATCACATGCTATCAGTCTCCTAAC
Motif Score	2.047297619
Cell/Tissue List	brain
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000455667.7; ENST00000547859.2; ENST00000447282.5; ENST00000437231.5
External Link	RMBase: m6A_site_190377
mod ID: M6ASITE012881		Click to Show/Hide the Full List
mod site	chr12:53480660-53480661:+		[8]
Sequence	ACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCAGAGAAGA
Motif Score	2.897386905
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000437231.5; ENST00000547859.2; ENST00000455667.7; ENST00000447282.5
External Link	RMBase: m6A_site_190378
mod ID: M6ASITE012882		Click to Show/Hide the Full List
mod site	chr12:53480692-53480693:+		[10]
Sequence	CAGAGAAGATAAATGGTGGGACAAAAAAATGAGTTACATTG
Motif Score	3.643047619
Cell/Tissue List	brain
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000455667.7; ENST00000447282.5; ENST00000437231.5; ENST00000547859.2
External Link	RMBase: m6A_site_190379
mod ID: M6ASITE012883		Click to Show/Hide the Full List
mod site	chr12:53480707-53480708:+		[7]
Sequence	GTGGGACAAAAAAATGAGTTACATTGCCACCTGAGAAACCT
Motif Score	2.07285119
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000447282.5; ENST00000437231.5; ENST00000455667.7; ENST00000547859.2
External Link	RMBase: m6A_site_190380
mod ID: M6ASITE012884		Click to Show/Hide the Full List
mod site	chr12:53480886-53480887:+		[7]
Sequence	TGGGGATAAAGAATATAAAGACAACCCTGGCTTTTCTATTG
Motif Score	2.897386905
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000447282.5; ENST00000455667.7; ENST00000437231.5
External Link	RMBase: m6A_site_190381

Pseudouridine (Pseudo)

In total 1 m6A sequence/site(s) in this target gene
mod ID: PSESITE000015		Click to Show/Hide the Full List
mod site	chr12:53479844-53479845:+		[13]
Sequence	CCACAGTGATTCATGTGGGTTTTATTCCTCTTGTCTTGCTG
Transcript ID List	ENST00000455667.7; ENST00000547859.2; ENST00000447282.5; ENST00000437231.5; ENST00000550585.5
External Link	RMBase: Pseudo_site_1138

Ref 1	NAT10-mediated N4-acetylcytidine mRNA modification regulates self-renewal in human embryonic stem cells. Nucleic Acids Res. 2023 Sep 8;51(16):8514-8531. doi: 10.1093/nar/gkad628.
Ref 2	RADAR: a rigorously annotated database of A-to-I RNA editing. Nucleic Acids Res. 2014 Jan;42(Database issue):D109-13. doi: 10.1093/nar/gkt996. Epub 2013 Oct 25.
Ref 3	Nm-seq maps 2'-O-methylation sites in human mRNA with base precision. Nat Methods. 2017 Jul;14(7):695-698. doi: 10.1038/nmeth.4294. Epub 2017 May 15.
Ref 4	5-methylcytosine promotes mRNA export - NSUN2 as the methyltransferase and ALYREF as an m(5)C reader. Cell Res. 2017 May;27(5):606-625. doi: 10.1038/cr.2017.55. Epub 2017 Apr 18.
Ref 5	VIRMA mediates preferential m(6)A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Cell Discov. 2018 Feb 27;4:10. doi: 10.1038/s41421-018-0019-0. eCollection 2018.
Ref 6	Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq. Nature. 2012 Apr 29;485(7397):201-6. doi: 10.1038/nature11112.
Ref 7	Deciphering the "m(6)A Code" via Antibody-Independent Quantitative Profiling. Cell. 2019 Jul 25;178(3):731-747.e16. doi: 10.1016/j.cell.2019.06.013. Epub 2019 Jun 27.
Ref 8	DART-seq: an antibody-free method for global m(6)A detection. Nat Methods. 2019 Dec;16(12):1275-1280. doi: 10.1038/s41592-019-0570-0. Epub 2019 Sep 23.
Ref 9	Suppression of m(6)A reader Ythdf2 promotes hematopoietic stem cell expansion. Cell Res. 2018 Sep;28(9):904-917. doi: 10.1038/s41422-018-0072-0. Epub 2018 Jul 31.
Ref 10	Single-base mapping of m(6)A by an antibody-independent method. Sci Adv. 2019 Jul 3;5(7):eaax0250. doi: 10.1126/sciadv.aax0250. eCollection 2019 Jul.
Ref 11	N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection. Cell Host Microbe. 2016 Nov 9;20(5):654-665. doi: 10.1016/j.chom.2016.09.015. Epub 2016 Oct 20.
Ref 12	Dynamics of the human and viral m(6)A RNA methylomes during HIV-1 infection of T cells. Nat Microbiol. 2016 Feb 22;1:16011. doi: 10.1038/nmicrobiol.2016.11.
Ref 13	Chemical pulldown reveals dynamic pseudouridylation of the mammalian transcriptome. Nat Chem Biol. 2015 Aug;11(8):592-7. doi: 10.1038/nchembio.1836. Epub 2015 Jun 15.

Epigenetic Target Information

Cite M6AREG

Correspondence

Prof. Feng ZHU

Prof. Shuiping Liu

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