Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00298)
Target Name Phosphatidylinositol 3-kinase regulatory subunit beta (PI3K-p85/PIK3R2)
Synonyms
PI3-kinase regulatory subunit beta; PI3K regulatory subunit beta; PtdIns-3-kinase regulatory subunit beta; Phosphatidylinositol 3-kinase 85 kDa regulatory subunit beta; PI3-kinase subunit p85-beta; PtdIns-3-kinase regulatory subunit p85-beta
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Gene Name PIK3R2
Sequence
MAGPEGFQYRALYPFRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDFPGTYVEFLGPVALARPGPRPRGPRPLPARPRDGAPEPGLTLPDLPEQFSPPDVAPPLLVKLVEAIERTGLDSESHYRPELPAPRTDWSLSDVDQWDTAALADGIKSFLLALPAPLVTPEASAEARRALREAAGPVGPALEPPTLPLHRALTLRFLLQHLGRVASRAPALGPAVRALGATFGPLLLRAPPPPSSPPPGGAPDGSEPSPDFPALLVEKLLQEHLEEQEVAPPALPPKPPKAKPASTVLANGGSPPSLQDAEWYWGDISREEVNEKLRDTPDGTFLVRDASSKIQGEYTLTLRKGGNNKLIKVFHRDGHYGFSEPLTFCSVVDLINHYRHESLAQYNAKLDTRLLYPVSKYQQDQIVKEDSVEAVGAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQTQEKCSKEYLERFRREGNEKEMQRILLNSERLKSRIAEIHESRTKLEQQLRAQASDNREIDKRMNSLKPDLMQLRKIRDQYLVWLTQKGARQKKINEWLGIKNETEDQYALMEDEDDLPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRESSQRGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNLYGSLKELVLHYQHASLVQHNDALTVTLAHPVRAPGPGPPPAAR
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Family PI3K p85 subunit family
Function
Regulatory subunit of phosphoinositide-3-kinase (PI3K), a kinase that phosphorylates PtdIns(4,5)P2 (Phosphatidylinositol 4,5-bisphosphate) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3). PIP3 plays a key role by recruiting PH domain-containing proteins to the membrane, including AKT1 and PDPK1, activating signaling cascades involved in cell growth, survival, proliferation, motility and morphology. Binds to activated (phosphorylated) protein-tyrosine kinases, through its SH2 domain, and acts as an adapter, mediating the association of the p110 catalytic unit to the plasma membrane. Indirectly regulates autophagy . Promotes nuclear translocation of XBP1 isoform 2 in a ER stress- and/or insulin-dependent manner during metabolic overloading in the liver and hence plays a role in glucose tolerance improvement (By similarity).
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Gene ID 5296
HGNC ID HGNC:8980
Ensembl Gene ID ENSG00000105647
KEGG ID hsa:5296
Chromosomal Location 19p13.11
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00298)
Phosphatidylinositol 3-kinase regulatory subunit beta (PI3K-p85/PIK3R2)
N1-methyladenosine (m1A)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M1ASITE000067 Click to Show/Hide the Full List
mod site chr19:18169534-18169535:+ [1]
Sequence CTCTCCATGTTGGGGGTCCTAACTCCCCCACCCCATATCTA
Cell/Tissue List HEK293T
Seq Type List m1A-MAP-seq
Transcript ID List ENST00000593731.1; ENST00000426902.5; ENST00000222254.13
External Link RMBase: m1A_site_543
5-methylcytidine (m5C)
In total 4 m6A sequence/site(s) in this target gene
mod ID: M5CSITE001848 Click to Show/Hide the Full List
mod site chr19:18161046-18161047:+ [2]
Sequence TGGACGTGTGCCCCCCTGCACCCGCAGACTGGTCCCTGAGC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000617130.4; ENST00000426902.5; ENST00000617642.1; ENST00000474310.1; ENST00000222254.13; ENST00000593731.1
External Link RMBase: m5C_site_23588
mod ID: M5CSITE001849 Click to Show/Hide the Full List
mod site chr19:18169403-18169404:+ [2]
Sequence ATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGG
Cell/Tissue List HeLa
Seq Type List m5C-RIP-seq; Bisulfite-seq
Transcript ID List ENST00000222254.13; ENST00000426902.5; ENST00000593731.1
External Link RMBase: m5C_site_23590
mod ID: M5CSITE001850 Click to Show/Hide the Full List
mod site chr19:18169404-18169405:+ [2]
Sequence TCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGG
Cell/Tissue List HeLa
Seq Type List m5C-RIP-seq; Bisulfite-seq
Transcript ID List ENST00000426902.5; ENST00000222254.13; ENST00000593731.1
External Link RMBase: m5C_site_23591
mod ID: M5CSITE001851 Click to Show/Hide the Full List
mod site chr19:18169978-18169979:+ [2]
Sequence AGCACTTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCG
Cell/Tissue List heart; HEK293T; lung; HeLa; T24
Seq Type List Bisulfite-seq; m5C-RIP-seq
Transcript ID List rmsk_4958106; ENST00000593731.1; ENST00000222254.13; ENST00000426902.5
External Link RMBase: m5C_site_23592
N6-methyladenosine (m6A)
In total 51 m6A sequence/site(s) in this target gene
mod ID: M6ASITE040514 Click to Show/Hide the Full List
mod site chr19:18153174-18153175:+ [3]
Sequence GGCGGGCCAGGCCGCTCGGAACCGTGGCGGCGGCGGAGGCG
Motif Score 2.930744048
Cell/Tissue List HepG2; GSC-11
Seq Type List m6A-seq
Transcript ID List ENST00000222254.13; ENST00000593731.1
External Link RMBase: m6A_site_428346
mod ID: M6ASITE040515 Click to Show/Hide the Full List
mod site chr19:18155606-18155607:+ [4]
Sequence GCCTCACCTGCTGATGGAGGACTCAATGGCCCAGTGACCTG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; MT4; Jurkat; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593731.1; ENST00000222254.13
External Link RMBase: m6A_site_428347
mod ID: M6ASITE040516 Click to Show/Hide the Full List
mod site chr19:18155670-18155671:+ [4]
Sequence CACCAGCTGACGAATGGTGGACCCAGTGACGAGTGGCCCTT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; MT4; MM6; Jurkat; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593731.1; ENST00000426902.5; ENST00000222254.13
External Link RMBase: m6A_site_428348
mod ID: M6ASITE040517 Click to Show/Hide the Full List
mod site chr19:18155748-18155749:+ [5]
Sequence GGCCCCTGTGGTCGCCTGTGACTGCTGGAGATAGAGGTCCC
Motif Score 3.28175
Cell/Tissue List A549; AML
Seq Type List m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000426902.5; ENST00000593731.1; ENST00000222254.13
External Link RMBase: m6A_site_428349
mod ID: M6ASITE040519 Click to Show/Hide the Full List
mod site chr19:18155783-18155784:+ [6]
Sequence GGTCCCAGCACCCCAAGCCAACCCAGCGGACCCTCCCAGCC
Motif Score 2.153267857
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000222254.13; ENST00000593731.1; ENST00000426902.5
External Link RMBase: m6A_site_428350
mod ID: M6ASITE040520 Click to Show/Hide the Full List
mod site chr19:18155792-18155793:+ [4]
Sequence ACCCCAAGCCAACCCAGCGGACCCTCCCAGCCCTGCTTCAA
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1B; H1A; hNPCs; hESCs; GM12878; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000593731.1; ENST00000426902.5
External Link RMBase: m6A_site_428351
mod ID: M6ASITE040521 Click to Show/Hide the Full List
mod site chr19:18155857-18155858:+ [4]
Sequence GCAGCCACCTAACCATCCAGACCCCACCCCACTCACGCGGC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; GM12878; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000426902.5; ENST00000593731.1
External Link RMBase: m6A_site_428352
mod ID: M6ASITE040522 Click to Show/Hide the Full List
mod site chr19:18155943-18155944:+ [4]
Sequence CCGCCGGGAGCGGCCGGAGGACCTGGAGCTGCTGCCCGGCG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000593731.1; ENST00000617130.4; ENST00000617642.1; ENST00000426902.5
External Link RMBase: m6A_site_428353
mod ID: M6ASITE040523 Click to Show/Hide the Full List
mod site chr19:18160559-18160560:+ [4]
Sequence TTGTGGAGGCCATTGAAAGGACAGGTAAGTTCCAGCCTGGC
Motif Score 3.643047619
Cell/Tissue List HeLa; peripheral-blood; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426902.5; ENST00000617642.1; ENST00000617130.4; ENST00000593731.1; ENST00000222254.13
External Link RMBase: m6A_site_428354
mod ID: M6ASITE040524 Click to Show/Hide the Full List
mod site chr19:18160924-18160925:+ [4]
Sequence CCCTTCACCCCCAGGGCTGGACAGCGAATCTCACTACCGCC
Motif Score 3.643047619
Cell/Tissue List HeLa; peripheral-blood; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000474310.1; ENST00000426902.5; ENST00000617642.1; ENST00000593731.1; ENST00000617130.4; ENST00000222254.13
External Link RMBase: m6A_site_428355
mod ID: M6ASITE040525 Click to Show/Hide the Full List
mod site chr19:18161083-18161084:+ [4]
Sequence GAGCGACGTGGATCAGTGGGACACGGCAGCCCTGGCTGACG
Motif Score 3.643047619
Cell/Tissue List HeLa; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000617130.4; ENST00000617642.1; ENST00000474310.1; ENST00000426902.5; ENST00000593731.1; ENST00000222254.13
External Link RMBase: m6A_site_428356
mod ID: M6ASITE040526 Click to Show/Hide the Full List
mod site chr19:18162019-18162020:+ [4]
Sequence GTGGAGAAGCTGCTTCAGGAACACTTGGAAGAGCAGGAGGT
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000426902.5; ENST00000593731.1; ENST00000617130.4; ENST00000617642.1; ENST00000222254.13
External Link RMBase: m6A_site_428357
mod ID: M6ASITE040527 Click to Show/Hide the Full List
mod site chr19:18162214-18162215:+ [4]
Sequence CCCCCAGCGCTGCCGCCTAAACCCCCCAAGGCAAAGCCGGC
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000617130.4; ENST00000593731.1; ENST00000600533.2; ENST00000222254.13; ENST00000426902.5; ENST00000617642.1
External Link RMBase: m6A_site_428358
mod ID: M6ASITE040528 Click to Show/Hide the Full List
mod site chr19:18162300-18162301:+ [4]
Sequence TGCTGAGTGGTACTGGGGGGACATTTCAAGGTAGGTTGCTG
Motif Score 3.643047619
Cell/Tissue List HeLa; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000222254.13; ENST00000617642.1; ENST00000617130.4; ENST00000426902.5; ENST00000593731.1; ENST00000600533.2
External Link RMBase: m6A_site_428359
mod ID: M6ASITE040530 Click to Show/Hide the Full List
mod site chr19:18162425-18162426:+ [4]
Sequence AGGGAGGAGGTGAACGAGAAACTCCGGGACACTCCCGATGG
Motif Score 2.627720238
Cell/Tissue List HeLa; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000617130.4; ENST00000593731.1; ENST00000617642.1; ENST00000222254.13; ENST00000600533.2; ENST00000426902.5
External Link RMBase: m6A_site_428360
mod ID: M6ASITE040531 Click to Show/Hide the Full List
mod site chr19:18162433-18162434:+ [4]
Sequence GGTGAACGAGAAACTCCGGGACACTCCCGATGGCACCTTCC
Motif Score 3.643047619
Cell/Tissue List HeLa; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000593731.1; ENST00000222254.13; ENST00000426902.5; ENST00000617642.1; ENST00000617130.4; ENST00000600533.2
External Link RMBase: m6A_site_428361
mod ID: M6ASITE040532 Click to Show/Hide the Full List
mod site chr19:18162554-18162555:+ [4]
Sequence GGGGGTCACAGGTCACAGAGACCGGGAGTTCAGAGGGGATA
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000617130.4; ENST00000593731.1; ENST00000600533.2; ENST00000426902.5; ENST00000617642.1; ENST00000222254.13
External Link RMBase: m6A_site_428362
mod ID: M6ASITE040533 Click to Show/Hide the Full List
mod site chr19:18162577-18162578:+ [4]
Sequence GGGAGTTCAGAGGGGATAGAACATGTGCGGTTTCAAGAATG
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000600533.2; ENST00000222254.13; ENST00000593731.1; ENST00000617642.1; ENST00000617130.4; ENST00000426902.5
External Link RMBase: m6A_site_428363
mod ID: M6ASITE040534 Click to Show/Hide the Full List
mod site chr19:18162977-18162978:+ [4]
Sequence CTCCCCCAGGAAAGGCGGGAACAATAAGCTGATCAAGGTCT
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000222254.13; ENST00000426902.5; ENST00000593731.1; ENST00000617642.1; ENST00000617130.4
External Link RMBase: m6A_site_428364
mod ID: M6ASITE040535 Click to Show/Hide the Full List
mod site chr19:18163055-18163056:+ [4]
Sequence CACCTTCTGCTCCGTTGTGGACCTCATCAATCACTACCGCC
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000222254.13; ENST00000593731.1; ENST00000617130.4; ENST00000617642.1; ENST00000426902.5
External Link RMBase: m6A_site_428365
mod ID: M6ASITE040536 Click to Show/Hide the Full List
mod site chr19:18163109-18163110:+ [4]
Sequence CCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTG
Motif Score 3.643047619
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000617130.4; ENST00000617642.1; ENST00000222254.13; ENST00000593731.1; ENST00000426902.5
External Link RMBase: m6A_site_428366
mod ID: M6ASITE040537 Click to Show/Hide the Full List
mod site chr19:18163281-18163282:+ [4]
Sequence GGACCAGATTGTCAAGGAGGACAGCGTGGAGGCAGTGGGCG
Motif Score 3.643047619
Cell/Tissue List HeLa; brain; kidney; Huh7
Seq Type List m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List ENST00000617130.4; ENST00000222254.13; ENST00000593731.1; ENST00000426902.5; ENST00000617642.1
External Link RMBase: m6A_site_428367
mod ID: M6ASITE040538 Click to Show/Hide the Full List
mod site chr19:18163335-18163336:+ [4]
Sequence CTATCACCAGCAGTACCAGGACAAGAGCCGCGAGTATGACC
Motif Score 3.643047619
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593731.1; ENST00000617642.1; ENST00000222254.13; ENST00000426902.5; ENST00000617130.4
External Link RMBase: m6A_site_428368
mod ID: M6ASITE040539 Click to Show/Hide the Full List
mod site chr19:18163379-18163380:+ [4]
Sequence TTTATGAAGAGTACACACGGACCTCCCAGGTACTCCAGGCC
Motif Score 3.622404762
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000617130.4; ENST00000593731.1; ENST00000617642.1; ENST00000426902.5; ENST00000222254.13
External Link RMBase: m6A_site_428369
mod ID: M6ASITE040541 Click to Show/Hide the Full List
mod site chr19:18166201-18166202:+ [4]
Sequence CAATTGAGGCCTTCAATGAGACTATCAAGATCTTTGAAGAG
Motif Score 3.319380952
Cell/Tissue List HeLa; MM6; Huh7; Jurkat; peripheral-blood; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000593731.1; ENST00000426902.5; ENST00000617130.4
External Link RMBase: m6A_site_428370
mod ID: M6ASITE040542 Click to Show/Hide the Full List
mod site chr19:18166231-18166232:+ [4]
Sequence TCTTTGAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAG
Motif Score 3.319380952
Cell/Tissue List HeLa; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000426902.5; ENST00000593731.1; ENST00000617130.4
External Link RMBase: m6A_site_428371
mod ID: M6ASITE040543 Click to Show/Hide the Full List
mod site chr19:18167140-18167141:+ [4]
Sequence CTCCCACAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCC
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; BGC823; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593731.1; ENST00000617130.4; ENST00000464016.3; ENST00000222254.13; ENST00000426902.5
External Link RMBase: m6A_site_428372
mod ID: M6ASITE040544 Click to Show/Hide the Full List
mod site chr19:18167224-18167225:+ [4]
Sequence GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; BGC823; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593731.1; ENST00000464016.3; ENST00000426902.5; ENST00000617130.4; ENST00000222254.13
External Link RMBase: m6A_site_428373
mod ID: M6ASITE040545 Click to Show/Hide the Full List
mod site chr19:18167251-18167252:+ [4]
Sequence AGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCA
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; BGC823; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593731.1; ENST00000617130.4; ENST00000222254.13; ENST00000464016.3; ENST00000426902.5
External Link RMBase: m6A_site_428374
mod ID: M6ASITE040546 Click to Show/Hide the Full List
mod site chr19:18167266-18167267:+ [4]
Sequence CATGAACAGCCTCAAGCCGGACCTCATGCAGCTGCGCAAGA
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; BGC823; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000464016.3; ENST00000426902.5; ENST00000593731.1; ENST00000617130.4
External Link RMBase: m6A_site_428375
mod ID: M6ASITE040547 Click to Show/Hide the Full List
mod site chr19:18167293-18167294:+ [4]
Sequence GCAGCTGCGCAAGATCCGAGACCAGTACCTCGTGTAAGTGG
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; hNPCs; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000426902.5; ENST00000617130.4; ENST00000593731.1; ENST00000464016.3
External Link RMBase: m6A_site_428376
mod ID: M6ASITE040548 Click to Show/Hide the Full List
mod site chr19:18168538-18168539:+ [4]
Sequence GGCTGGGGATTAAAAATGAGACTGAGGAGTGAGTGACCGTC
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; hNPCs; MT4; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426902.5; ENST00000459743.2; ENST00000593731.1; ENST00000464016.3; ENST00000617130.4; ENST00000222254.13
External Link RMBase: m6A_site_428377
mod ID: M6ASITE040549 Click to Show/Hide the Full List
mod site chr19:18169303-18169304:+ [4]
Sequence CCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGC
Motif Score 3.622404762
Cell/Tissue List HeLa; U2OS; MT4; GSC-11; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000593731.1; ENST00000426902.5
External Link RMBase: m6A_site_428378
mod ID: M6ASITE040550 Click to Show/Hide the Full List
mod site chr19:18169369-18169370:+ [4]
Sequence TGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAGG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; MT4; MM6; Huh7; Jurkat; GSC-11; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593731.1; ENST00000222254.13; ENST00000426902.5
External Link RMBase: m6A_site_428379
mod ID: M6ASITE040552 Click to Show/Hide the Full List
mod site chr19:18169374-18169375:+ [4]
Sequence CGGCGGGAGCCACGGACCAGACCAGCCACATCCAGGGGTCC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; MT4; MM6; Huh7; Jurkat; GSC-11; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593731.1; ENST00000426902.5; ENST00000222254.13
External Link RMBase: m6A_site_428380
mod ID: M6ASITE040553 Click to Show/Hide the Full List
mod site chr19:18169727-18169728:+ [4]
Sequence CCCTGATTTTTAAGCCATAGACCTGGGGTCAGGGCAGGAAG
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1A; H1B; fibroblasts; MT4; Huh7; GSC-11; HEK293A-TOA; iSLK; MSC; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593731.1; ENST00000222254.13; ENST00000426902.5
External Link RMBase: m6A_site_428381
mod ID: M6ASITE040554 Click to Show/Hide the Full List
mod site chr19:18169750-18169751:+ [4]
Sequence TGGGGTCAGGGCAGGAAGGAACTTCACTCTGCTGCTTCCGA
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; MT4; H1299; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000593731.1; ENST00000426902.5
External Link RMBase: m6A_site_428382
mod ID: M6ASITE040555 Click to Show/Hide the Full List
mod site chr19:18169773-18169774:+ [4]
Sequence TCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; MT4; H1299; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426902.5; ENST00000222254.13; ENST00000593731.1
External Link RMBase: m6A_site_428383
mod ID: M6ASITE040556 Click to Show/Hide the Full List
mod site chr19:18169785-18169786:+ [7]
Sequence TTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGGGAC
Motif Score 2.859755952
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000426902.5; ENST00000593731.1; ENST00000222254.13
External Link RMBase: m6A_site_428384
mod ID: M6ASITE040557 Click to Show/Hide the Full List
mod site chr19:18169804-18169805:+ [4]
Sequence GACATTCGGGGCCGGGCGGGACCCGCCCCACAGACTCCAAC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; MT4; H1299; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426902.5; ENST00000222254.13; ENST00000593731.1
External Link RMBase: m6A_site_428385
mod ID: M6ASITE040558 Click to Show/Hide the Full List
mod site chr19:18169817-18169818:+ [4]
Sequence GGGCGGGACCCGCCCCACAGACTCCAACTTCCCCTCCAAAC
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; MT4; H1299; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000426902.5; ENST00000593731.1
External Link RMBase: m6A_site_428386
mod ID: M6ASITE040559 Click to Show/Hide the Full List
mod site chr19:18169836-18169837:+ [4]
Sequence GACTCCAACTTCCCCTCCAAACCCCGAAGTGAAACCCGCCA
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; MT4; H1299; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000426902.5; ENST00000593731.1
External Link RMBase: m6A_site_428387
mod ID: M6ASITE040560 Click to Show/Hide the Full List
mod site chr19:18169849-18169850:+ [4]
Sequence CCTCCAAACCCCGAAGTGAAACCCGCCACCGGGTTACCCCC
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; A549; HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; MT4; H1299; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593731.1; ENST00000426902.5; ENST00000222254.13
External Link RMBase: m6A_site_428388
mod ID: M6ASITE040561 Click to Show/Hide the Full List
mod site chr19:18169870-18169871:+ [6]
Sequence CCCGCCACCGGGTTACCCCCACAAGGGGGCCGCTGCGAGAA
Motif Score 2.053113095
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000426902.5; ENST00000222254.13; ENST00000593731.1
External Link RMBase: m6A_site_428389
mod ID: M6ASITE040563 Click to Show/Hide the Full List
mod site chr19:18169919-18169920:+ [4]
Sequence ACCCCCGAAAAAATAATTAAACTCGCAGGCCAGGCACGGTG
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; A549; H1A; H1B; MT4; H1299; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000426902.5; ENST00000593731.1
External Link RMBase: m6A_site_428390
mod ID: M6ASITE040564 Click to Show/Hide the Full List
mod site chr19:18170032-18170033:+ [8]
Sequence AGCCTGGCCAAAATGGCAAAACCCCGCATCTACTAAAATAC
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List rmsk_4958106; ENST00000593731.1; ENST00000426902.5; ENST00000222254.13
External Link RMBase: m6A_site_428391
mod ID: M6ASITE040565 Click to Show/Hide the Full List
mod site chr19:18170187-18170188:+ [7]
Sequence ACTGCACTCCAGCCTGGGTAACAGAGGGAGACTCCTCCGTC
Motif Score 2.168095238
Cell/Tissue List liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000222254.13; ENST00000593731.1; rmsk_4958106
External Link RMBase: m6A_site_428392
mod ID: M6ASITE040566 Click to Show/Hide the Full List
mod site chr19:18170262-18170263:+ [7]
Sequence CCCAACCCCTCCTAGGAATCACAGCTCCCCGTACTGGTGCC
Motif Score 2.047297619
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000593731.1; ENST00000222254.13
External Link RMBase: m6A_site_428393
mod ID: M6ASITE040567 Click to Show/Hide the Full List
mod site chr19:18170417-18170418:+ [9]
Sequence CTTTCCTCTCCTCTTTTGGGACAAGAGCCCTGGTTTTCTAC
Motif Score 3.643047619
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000593731.1; ENST00000222254.13
External Link RMBase: m6A_site_428394
mod ID: M6ASITE040568 Click to Show/Hide the Full List
mod site chr19:18170491-18170492:+ [6]
Sequence AGCTGGGAGGCAGGTTTTGTACGGTACGTTGTTATTGATAT
Motif Score 2.830077381
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000222254.13; ENST00000593731.1
External Link RMBase: m6A_site_428395
mod ID: M6ASITE040569 Click to Show/Hide the Full List
mod site chr19:18170520-18170521:+ [9]
Sequence TGTTATTGATATGATATAAAACATCAAACGTCGTGGGTGAT
Motif Score 2.20572619
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000222254.13; ENST00000593731.1
External Link RMBase: m6A_site_428396
2'-O-Methylation (2'-O-Me)
In total 1 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000198 Click to Show/Hide the Full List
mod site chr19:18155753-18155754:+ [10]
Sequence CTGTGGTCGCCTGTGACTGCTGGAGATAGAGGTCCCAGCAC
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000593731.1; ENST00000222254.13; ENST00000426902.5
External Link RMBase: Nm_site_2821