General Information of the Epigenetic Target (ID: EPITAR00291)
Target Name Heat shock 70 kDa protein 1A (HSPA1A)
Synonyms
Heat shock 70 kDa protein 1; HSP70-1; HSP70.1; HSP72; HSPA1; HSX70
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Gene Name HSPA1A
Sequence
MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD
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Family Heat shock protein 70 family
Function
Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, activation of proteolysis of misfolded proteins and the formation and dissociation of protein complexes. Plays a pivotal role in the protein quality control system, ensuring the correct folding of proteins, the re-folding of misfolded proteins and controlling the targeting of proteins for subsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis and ADP release, mediated by co-chaperones. The co-chaperones have been shown to not only regulate different steps of the ATPase cycle, but they also have an individual specificity such that one co-chaperone may promote folding of a substrate while another may promote degradation. The affinity for polypeptides is regulated by its nucleotide bound state. In the ATP-bound form, it has a low affinity for substrate proteins. However, upon hydrolysis of the ATP to ADP, it undergoes a conformational change that increases its affinity for substrate proteins. It goes through repeated cycles of ATP hydrolysis and nucleotide exchange, which permits cycles of substrate binding and release. The co-chaperones are of three types: J-domain co-chaperones such as HSP40s (stimulate ATPase hydrolysis by HSP70), the nucleotide exchange factors (NEF) such as BAG1/2/3 (facilitate conversion of HSP70 from the ADP-bound to the ATP-bound state thereby promoting substrate release), and the TPR domain chaperones such as HOPX and STUB1. Maintains protein homeostasis during cellular stress through two opposing mechanisms: protein refolding and degradation. Its acetylation/deacetylation state determines whether it functions in protein refolding or protein degradation by controlling the competitive binding of co-chaperones HOPX and STUB1. During the early stress response, the acetylated form binds to HOPX which assists in chaperone-mediated protein refolding, thereafter, it is deacetylated and binds to ubiquitin ligase STUB1 that promotes ubiquitin-mediated protein degradation. Regulates centrosome integrity during mitosis, and is required for the maintenance of a functional mitotic centrosome that supports the assembly of a bipolar mitotic spindle. Enhances STUB1-mediated SMAD3 ubiquitination and degradation and facilitates STUB1-mediated inhibition of TGF-beta signaling. Essential for STUB1-mediated ubiquitination and degradation of FOXP3 in regulatory T-cells (Treg) during inflammation. Negatively regulates heat shock-induced HSF1 transcriptional activity during the attenuation and recovery phase period of the heat shock response. Involved in the clearance of misfolded PRDM1/Blimp-1 proteins. Sequesters them in the cytoplasm and promotes their association with SYNV1/HRD1, leading to proteasomal degradation. (Microbial infection) In case of rotavirus A infection, serves as a post-attachment receptor for the virus to facilitate entry into the cell.
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Gene ID 3303
HGNC ID HGNC:5232
Ensembl Gene ID ENSG00000204389
KEGG ID hsa:3303
Chromosomal Location 6p21.33
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00291)
Heat shock 70 kDa protein 1A (HSPA1A)
2'-O-Methylation (2'-O-Me)
In total 3 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000397 Click to Show/Hide the Full List
mod site chr6:31815683-31815684:+ [1]
Sequence GCGTCCGGAAGGACCGAGCTCTTCTCGCGGATCCAGTGTTC
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: Nm_site_5803
mod ID: 2OMSITE000398 Click to Show/Hide the Full List
mod site chr6:31815684-31815685:+ [1]
Sequence CGTCCGGAAGGACCGAGCTCTTCTCGCGGATCCAGTGTTCC
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: Nm_site_5804
mod ID: 2OMSITE000399 Click to Show/Hide the Full List
mod site chr6:31817218-31817219:+ [1]
Sequence TGCCAACGGCATCCTGAACGTCACGGCCACGGACAAGAGCA
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: Nm_site_5805
N6-methyladenosine (m6A)
In total 63 m6A sequence/site(s) in this target gene
mod ID: M6ASITE074433 Click to Show/Hide the Full List
mod site chr6:31815821-31815822:+ [2]
Sequence TCCTGCGTGGGGGTGTTCCAACACGGCAAGGTGGAGATCAT
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712321
mod ID: M6ASITE074434 Click to Show/Hide the Full List
mod site chr6:31815892-31815893:+ [2]
Sequence CAGCTACGTGGCCTTCACGGACACCGAGCGGCTCATCGGGG
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712322
mod ID: M6ASITE074435 Click to Show/Hide the Full List
mod site chr6:31815949-31815950:+ [2]
Sequence GGTGGCGCTGAACCCGCAGAACACCGTGTTTGACGCGAAGC
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712323
mod ID: M6ASITE074436 Click to Show/Hide the Full List
mod site chr6:31816012-31816013:+ [2]
Sequence CGACCCGGTGGTGCAGTCGGACATGAAGCACTGGCCTTTCC
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712324
mod ID: M6ASITE074437 Click to Show/Hide the Full List
mod site chr6:31816075-31816076:+ [2]
Sequence GCCCAAGGTGCAGGTGAGCTACAAGGGGGAGACCAAGGCAT
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712325
mod ID: M6ASITE074438 Click to Show/Hide the Full List
mod site chr6:31816429-31816430:+ [2]
Sequence GGTGAAGGCCACGGCCGGGGACACCCACCTGGGTGGGGAGG
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712326
mod ID: M6ASITE074439 Click to Show/Hide the Full List
mod site chr6:31816499-31816500:+ [2]
Sequence GTGGAGGAGTTCAAGAGAAAACACAAGAAGGACATCAGCCA
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712327
mod ID: M6ASITE074440 Click to Show/Hide the Full List
mod site chr6:31816522-31816523:+ [2]
Sequence CAAGAAGGACATCAGCCAGAACAAGCGAGCCGTGAGGCGGC
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712328
mod ID: M6ASITE074441 Click to Show/Hide the Full List
mod site chr6:31816636-31816637:+ [2]
Sequence GTTTGAGGGCATCGACTTCTACACGTCCATCACCAGGGCGA
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712329
mod ID: M6ASITE074442 Click to Show/Hide the Full List
mod site chr6:31816735-31816736:+ [2]
Sequence TCTGCGCGACGCCAAGCTGGACAAGGCCCAGATTCACGACC
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712330
mod ID: M6ASITE074443 Click to Show/Hide the Full List
mod site chr6:31816834-31816835:+ [2]
Sequence CTTCAACGGGCGCGACCTGAACAAGAGCATCAACCCCGACG
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712331
mod ID: M6ASITE074444 Click to Show/Hide the Full List
mod site chr6:31816903-31816904:+ [2]
Sequence GGCGGCCATCCTGATGGGGGACAAGTCCGAGAACGTGCAGG
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712332
mod ID: M6ASITE074445 Click to Show/Hide the Full List
mod site chr6:31817053-31817054:+ [2]
Sequence GATCTTCACCACCTACTCCGACAACCAACCCGGGGTGCTGA
Motif Score 2.865571429
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712333
mod ID: M6ASITE074446 Click to Show/Hide the Full List
mod site chr6:31817110-31817111:+ [2]
Sequence CGAGAGGGCCATGACGAAAGACAACAATCTGTTGGGGCGCT
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712334
mod ID: M6ASITE074447 Click to Show/Hide the Full List
mod site chr6:31817113-31817114:+ [2]
Sequence GAGGGCCATGACGAAAGACAACAATCTGTTGGGGCGCTTCG
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712335
mod ID: M6ASITE074448 Click to Show/Hide the Full List
mod site chr6:31817191-31817192:+ [2]
Sequence CCAGATCGAGGTGACCTTCGACATCGATGCCAACGGCATCC
Motif Score 2.865571429
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712336
mod ID: M6ASITE074449 Click to Show/Hide the Full List
mod site chr6:31817272-31817273:+ [2]
Sequence CAAGATCACCATCACCAACGACAAGGGCCGCCTGAGCAAGG
Motif Score 2.865571429
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712337
mod ID: M6ASITE074450 Click to Show/Hide the Full List
mod site chr6:31817329-31817330:+ [2]
Sequence GGTGCAGGAGGCGGAGAAGTACAAAGCGGAGGACGAGGTGC
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712338
mod ID: M6ASITE074451 Click to Show/Hide the Full List
mod site chr6:31817398-31817399:+ [2]
Sequence CCTGGAGTCCTACGCCTTCAACATGAAGAGCGCCGTGGAGG
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712339
mod ID: M6ASITE074452 Click to Show/Hide the Full List
mod site chr6:31817452-31817453:+ [3]
Sequence GGGCAAGATCAGCGAGGCGGACAAGAAGAAGGTGCTGGACA
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712340
mod ID: M6ASITE074453 Click to Show/Hide the Full List
mod site chr6:31817470-31817471:+ [3]
Sequence GGACAAGAAGAAGGTGCTGGACAAGTGTCAAGAGGTCATCT
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712341
mod ID: M6ASITE074454 Click to Show/Hide the Full List
mod site chr6:31817536-31817537:+ [2]
Sequence CGAGAAGGACGAGTTTGAGCACAAGAGGAAGGAGCTGGAGC
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712342
mod ID: M6ASITE074455 Click to Show/Hide the Full List
mod site chr6:31817582-31817583:+ [3]
Sequence TGTAACCCCATCATCAGCGGACTGTACCAGGGTGCCGGTGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712343
mod ID: M6ASITE074456 Click to Show/Hide the Full List
mod site chr6:31817723-31817724:+ [4]
Sequence TTTTGTTTTGGAGCTTCAAGACTTTGCATTTCCTAGTATTT
Motif Score 3.319380952
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712344
mod ID: M6ASITE074457 Click to Show/Hide the Full List
mod site chr6:31817805-31817806:+ [4]
Sequence ATTTTTTGGTGAAGTACTGAACTTGCTTTTTTTCCGGTTTC
Motif Score 3.373380952
Cell/Tissue List CD8T; A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000608703.1; ENST00000375651.6
External Link RMBase: m6A_site_712345
mod ID: M6ASITE074458 Click to Show/Hide the Full List
mod site chr6:31817827-31817828:+ [2]
Sequence TTGCTTTTTTTCCGGTTTCTACATGCAGAGATGAATTTATA
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712346
mod ID: M6ASITE074459 Click to Show/Hide the Full List
mod site chr6:31817880-31817881:+ [2]
Sequence GACTATTTCTTCTTTTTAATACACTTAACTCAGGCCATTTT
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m6A_site_712347
mod ID: M6ASITE094239 Click to Show/Hide the Full List
mod site GL000250.2:3149357-3149358:+ [3]
Sequence TCTGCGCGACGCCAAGCTGGACAAGGCCCAGATTCACGACC
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000430065.1; ENST00000422919.1
External Link RMBase: m6A_site_879511
mod ID: M6ASITE094240 Click to Show/Hide the Full List
mod site GL000250.2:3149432-3149433:+ [3]
Sequence GGTGCAGAAGCTGCTGCAGGACTTCTTCAACGGGCGCGACC
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000422919.1; ENST00000430065.1
External Link RMBase: m6A_site_879512
mod ID: M6ASITE094241 Click to Show/Hide the Full List
mod site GL000250.2:3149456-3149457:+ [3]
Sequence CTTCAACGGGCGCGACCTGAACAAGAGCATCAACCCCGACG
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000422919.1; ENST00000430065.1
External Link RMBase: m6A_site_879513
mod ID: M6ASITE094242 Click to Show/Hide the Full List
mod site GL000250.2:3149525-3149526:+ [3]
Sequence GGCGGCCATCCTGATGGGGGACAAGTCCGAGAACGTGCAGG
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000422919.1; ENST00000430065.1
External Link RMBase: m6A_site_879514
mod ID: M6ASITE094243 Click to Show/Hide the Full List
mod site GL000250.2:3149546-3149547:+ [3]
Sequence CAAGTCCGAGAACGTGCAGGACCTGCTGCTGCTGGACGTGG
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000422919.1; ENST00000430065.1
External Link RMBase: m6A_site_879515
mod ID: M6ASITE094244 Click to Show/Hide the Full List
mod site GL000250.2:3150092-3150093:+ [3]
Sequence CGACAAGAAGAAGGTGCTGGACAAGTGTCAAGAGGTCATCT
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000430065.1; ENST00000422919.1
External Link RMBase: m6A_site_879516
mod ID: M6ASITE094245 Click to Show/Hide the Full List
mod site GL000250.2:3150204-3150205:+ [3]
Sequence TGTAACCCCATCATCAGCGGACTGTACCAGGGTGCCGGTGG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000422919.1; ENST00000430065.1
External Link RMBase: m6A_site_879517
mod ID: M6ASITE094269 Click to Show/Hide the Full List
mod site GL000251.2:3292926-3292927:+ [3]
Sequence AGTTTCCGGCGTCCGGAAGGACCGAGCTCTTCTCGCGGATC
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000449876.1; ENST00000441618.1
External Link RMBase: m6A_site_879637
mod ID: M6ASITE094270 Click to Show/Hide the Full List
mod site GL000251.2:3293001-3293002:+ [3]
Sequence GAGCCGACAGAGAGCAGGGAACCGGCATGGCCAAAGCCGCG
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000449876.1; ENST00000441618.1
External Link RMBase: m6A_site_879638
mod ID: M6ASITE094271 Click to Show/Hide the Full List
mod site GL000251.2:3293143-3293144:+ [3]
Sequence CAGCTACGTGGCCTTCACGGACACCGAGCGGCTCATCGGGG
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000441618.1; ENST00000449876.1
External Link RMBase: m6A_site_879639
mod ID: M6ASITE094272 Click to Show/Hide the Full List
mod site GL000251.2:3294721-3294722:+ [3]
Sequence CGACAAGAAGAAGGTGCTGGACAAGTGTCAAGAGGTCATCT
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000441618.1; ENST00000449876.1
External Link RMBase: m6A_site_879640
mod ID: M6ASITE094273 Click to Show/Hide the Full List
mod site GL000251.2:3294833-3294834:+ [3]
Sequence TGTAACCCCATCATCAGCGGACTGTACCAGGGTGCCGGTGG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000449876.1; ENST00000441618.1
External Link RMBase: m6A_site_879641
mod ID: M6ASITE094274 Click to Show/Hide the Full List
mod site GL000251.2:3294974-3294975:+ [3]
Sequence TTTTGTTTTGGAGCTTCAAGACTTTGCATTTCCTAGTATTT
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000441618.1; ENST00000449876.1
External Link RMBase: m6A_site_879642
mod ID: M6ASITE094330 Click to Show/Hide the Full List
mod site GL000252.2:3063529-3063530:+ [3]
Sequence GAGCCGACAGAGAGCAGGGAACCGGCATGGCCAAAGCCGCG
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000433487.1; ENST00000452298.1
External Link RMBase: m6A_site_879826
mod ID: M6ASITE094331 Click to Show/Hide the Full List
mod site GL000252.2:3063671-3063672:+ [3]
Sequence CAGCTACGTGGCCTTCACGGACACCGAGCGGCTCATCGGGG
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000452298.1; ENST00000433487.1
External Link RMBase: m6A_site_879827
mod ID: M6ASITE094332 Click to Show/Hide the Full List
mod site GL000252.2:3063704-3063705:+ [3]
Sequence CATCGGGGATGCGGCCAAGAACCAGGTGGCGCTGAACCCGC
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000452298.1; ENST00000433487.1
External Link RMBase: m6A_site_879828
mod ID: M6ASITE094333 Click to Show/Hide the Full List
mod site GL000252.2:3065231-3065232:+ [3]
Sequence GGGCAAGATCAGCGAGGCGGACAAGAAGAAGGTGCTGGACA
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293A-TOA
Seq Type List m6A-seq
Transcript ID List ENST00000433487.1; ENST00000452298.1
External Link RMBase: m6A_site_879829
mod ID: M6ASITE094335 Click to Show/Hide the Full List
mod site GL000252.2:3065249-3065250:+ [3]
Sequence GGACAAGAAGAAGGTGCTGGACAAGTGTCAAGAGGTCATCT
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293A-TOA
Seq Type List m6A-seq
Transcript ID List ENST00000452298.1; ENST00000433487.1
External Link RMBase: m6A_site_879830
mod ID: M6ASITE094336 Click to Show/Hide the Full List
mod site GL000252.2:3065361-3065362:+ [3]
Sequence TGTAACCCCATCATCAGCGGACTGTACCAGGGTGCCGGTGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000433487.1; ENST00000452298.1
External Link RMBase: m6A_site_879831
mod ID: M6ASITE094459 Click to Show/Hide the Full List
mod site GL000255.2:3071453-3071454:+ [3]
Sequence CCCAAGGCTTCCCAGAGCGAACCTGTGCGGCTGCAGGCACC
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000383389.2; ENST00000400040.1
External Link RMBase: m6A_site_880326
mod ID: M6ASITE094460 Click to Show/Hide the Full List
mod site GL000255.2:3071503-3071504:+ [3]
Sequence AGTTTCCGGCGTCCGGAAGGACCGAGCTCTTCTCGCGGATC
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000400040.1; ENST00000383389.2
External Link RMBase: m6A_site_880327
mod ID: M6ASITE094461 Click to Show/Hide the Full List
mod site GL000255.2:3071578-3071579:+ [3]
Sequence GAGCCGACAGAGAGCAGGGAACCGGCATGGCCAAAGCCGCG
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000383389.2; ENST00000400040.1
External Link RMBase: m6A_site_880328
mod ID: M6ASITE094462 Click to Show/Hide the Full List
mod site GL000255.2:3071720-3071721:+ [3]
Sequence CAGCTACGTGGCCTTCACGGACACCGAGCGGCTCATCGGGG
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000383389.2; ENST00000400040.1
External Link RMBase: m6A_site_880329
mod ID: M6ASITE094464 Click to Show/Hide the Full List
mod site GL000255.2:3071753-3071754:+ [3]
Sequence CATCGGGGATGCGGCCAAGAACCAGGTGGCGCTGAACCCGC
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000400040.1; ENST00000383389.2
External Link RMBase: m6A_site_880330
mod ID: M6ASITE094465 Click to Show/Hide the Full List
mod site GL000255.2:3071768-3071769:+ [3]
Sequence CAAGAACCAGGTGGCGCTGAACCCGCAGAACACCGTGTTTG
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000383389.2; ENST00000400040.1
External Link RMBase: m6A_site_880331
mod ID: M6ASITE094466 Click to Show/Hide the Full List
mod site GL000255.2:3071777-3071778:+ [3]
Sequence GGTGGCGCTGAACCCGCAGAACACCGTGTTTGACGCGAAGC
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000400040.1; ENST00000383389.2
External Link RMBase: m6A_site_880332
mod ID: M6ASITE094467 Click to Show/Hide the Full List
mod site GL000255.2:3071840-3071841:+ [3]
Sequence CGACCCGGTGGTGCAGTCGGACATGAAGCACTGGCCTTTCC
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; HepG2; GSC-11; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000383389.2; ENST00000400040.1
External Link RMBase: m6A_site_880333
mod ID: M6ASITE094468 Click to Show/Hide the Full List
mod site GL000255.2:3071879-3071880:+ [3]
Sequence CCAGGTGATCAACGACGGAGACAAGCCCAAGGTGCAGGTGA
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; HepG2; GSC-11; iSLK; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000400040.1; ENST00000383389.2
External Link RMBase: m6A_site_880334
mod ID: M6ASITE094469 Click to Show/Hide the Full List
mod site GL000255.2:3071912-3071913:+ [3]
Sequence GCAGGTGAGCTACAAGGGGGACACCAAGGCATTCTACCCCG
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; HepG2; GSC-11; iSLK; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000400040.1; ENST00000383389.2
External Link RMBase: m6A_site_880335
mod ID: M6ASITE094470 Click to Show/Hide the Full List
mod site GL000255.2:3072563-3072564:+ [3]
Sequence TCTGCGCGACGCCAAGCTGGACAAGGCCCAGATTCACGACC
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000383389.2; ENST00000400040.1
External Link RMBase: m6A_site_880336
mod ID: M6ASITE094471 Click to Show/Hide the Full List
mod site GL000255.2:3072638-3072639:+ [3]
Sequence GGTGCAGAAGCTGCTGCAGGACTTCTTCAACGGGCGCGACC
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000383389.2; ENST00000400040.1
External Link RMBase: m6A_site_880337
mod ID: M6ASITE094472 Click to Show/Hide the Full List
mod site GL000255.2:3072662-3072663:+ [3]
Sequence CTTCAACGGGCGCGACCTGAACAAGAGCATCAACCCCGACG
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000400040.1; ENST00000383389.2
External Link RMBase: m6A_site_880338
mod ID: M6ASITE094473 Click to Show/Hide the Full List
mod site GL000255.2:3073298-3073299:+ [3]
Sequence CGACAAGAAGAAGGTGCTGGACAAGTGTCAAGAGGTCATCT
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000400040.1; ENST00000383389.2
External Link RMBase: m6A_site_880339
mod ID: M6ASITE094475 Click to Show/Hide the Full List
mod site GL000255.2:3073410-3073411:+ [3]
Sequence TGTAACCCCATCATCAGCGGACTGTACCAGGGTGCCGGTGG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000383389.2; ENST00000400040.1
External Link RMBase: m6A_site_880340
mod ID: M6ASITE094476 Click to Show/Hide the Full List
mod site GL000255.2:3073551-3073552:+ [3]
Sequence TTTTGTTTTGGAGCTTCAAGACTTTGCATTTCCTAGTATTT
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000383389.2; ENST00000400040.1
External Link RMBase: m6A_site_880341
mod ID: M6ASITE094477 Click to Show/Hide the Full List
mod site GL000255.2:3073633-3073634:+ [3]
Sequence ATTTTTTGGTGAAGTACTGAACTTGCTTTTTTTCCGGTTTC
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000400040.1; ENST00000383389.2
External Link RMBase: m6A_site_880342
N7-methylguanosine (m7G)
In total 1 m6A sequence/site(s) in this target gene
mod ID: m7GSITE000106 Click to Show/Hide the Full List
mod site chr6:31817412-31817413:+ [5]
Sequence CCTTCAACATGAAGAGCGCCGTGGAGGATGAGGGGCTCAAG
Cell/Tissue List A549; HeLa; HepG2
Seq Type List BoRed-seq&m7G-RIP-seq; m7G-seq
Transcript ID List ENST00000375651.6; ENST00000608703.1
External Link RMBase: m7G_site_776