Epigenetic Target Information
General Information of the Epigenetic Target (ID: EPITAR00257)
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00257)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE009677 | Click to Show/Hide the Full List | ||
| mod site | chr1:110405311-110405312:- | [1] | |
| Sequence | AAAAATTAGCCAGGCATGGTAGCAGGTGCTAGTAATCCCAG | ||
| Transcript ID List | ENST00000531779.1; ENST00000614544.1; rmsk_227760; ENST00000602318.5; ENST00000474861.6; ENST00000483260.5; ENST00000256644.8; ENST00000464240.1; ENST00000602858.5 | ||
| External Link | RMBase: RNA-editing_site_7678 | ||
5-methylcytidine (m5C)
N6-methyladenosine (m6A)
| In total 15 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE041752 | Click to Show/Hide the Full List | ||
| mod site | chr1:110401301-110401302:- | [2] | |
| Sequence | TGAAGCAGCAGGTCCAGGTCACTTTGTATATAGAATTTTGC | ||
| Motif Score | 2.469291667 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000602858.5; ENST00000474861.6; ENST00000602318.5; ENST00000483260.5; ENST00000614544.1; ENST00000256644.8; ENST00000464240.1 | ||
| External Link | RMBase: m6A_site_44644 | ||
| mod ID: M6ASITE041753 | Click to Show/Hide the Full List | ||
| mod site | chr1:110401359-110401360:- | [3] | |
| Sequence | TGCTTTCTAATGCTCTATGGACCGACTATCAAGATATTAGT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000602318.5; ENST00000602858.5; ENST00000614544.1; ENST00000483260.5; ENST00000474861.6; ENST00000464240.1; ENST00000256644.8 | ||
| External Link | RMBase: m6A_site_44645 | ||
| mod ID: M6ASITE041754 | Click to Show/Hide the Full List | ||
| mod site | chr1:110401450-110401451:- | [2] | |
| Sequence | GTTAATTACCTTATAGAACTACTAAAGTTCCAGTAGTTAGG | ||
| Motif Score | 2.500660714 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000483260.5; ENST00000474861.6; ENST00000602318.5; ENST00000464240.1; ENST00000256644.8; ENST00000614544.1; ENST00000602858.5 | ||
| External Link | RMBase: m6A_site_44646 | ||
| mod ID: M6ASITE041755 | Click to Show/Hide the Full List | ||
| mod site | chr1:110401453-110401454:- | [3] | |
| Sequence | TATGTTAATTACCTTATAGAACTACTAAAGTTCCAGTAGTT | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000602858.5; ENST00000602318.5; ENST00000256644.8; ENST00000614544.1; ENST00000474861.6; ENST00000464240.1; ENST00000483260.5 | ||
| External Link | RMBase: m6A_site_44647 | ||
| mod ID: M6ASITE041756 | Click to Show/Hide the Full List | ||
| mod site | chr1:110401538-110401539:- | [4] | |
| Sequence | TGGCATCACGGTGGCAGTGCACAAAATGGCCTCTTGATGCT | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | HEK293; HEK293T; hESC-HEK293T | ||
| Seq Type List | m6A-REF-seq; DART-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000256644.8; ENST00000602858.5; ENST00000614544.1; ENST00000464240.1; ENST00000474861.6; ENST00000483260.5; ENST00000602318.5 | ||
| External Link | RMBase: m6A_site_44648 | ||
| mod ID: M6ASITE041757 | Click to Show/Hide the Full List | ||
| mod site | chr1:110404027-110404028:- | [3] | |
| Sequence | TCTATTTTCCAGGCCGCGGGACCCTGTCAGATGAGCATGCT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; TIME; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000614544.1; ENST00000602318.5; ENST00000464240.1; ENST00000602858.5; ENST00000531779.1; ENST00000483260.5; ENST00000256644.8; ENST00000474861.6 | ||
| External Link | RMBase: m6A_site_44649 | ||
| mod ID: M6ASITE041758 | Click to Show/Hide the Full List | ||
| mod site | chr1:110406330-110406331:- | [3] | |
| Sequence | CTGTGCACAGATTCACAAGGACTTAATCTGGGTTGTAAGTA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; TIME; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000256644.8; ENST00000614544.1; ENST00000602858.5; ENST00000474861.6; ENST00000602318.5; ENST00000531779.1; ENST00000483260.5; ENST00000464240.1 | ||
| External Link | RMBase: m6A_site_44650 | ||
| mod ID: M6ASITE041759 | Click to Show/Hide the Full List | ||
| mod site | chr1:110406336-110406337:- | [4] | |
| Sequence | GGAGTCCTGTGCACAGATTCACAAGGACTTAATCTGGGTTG | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | liver; hESC-HEK293T | ||
| Seq Type List | m6A-REF-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000464240.1; ENST00000474861.6; ENST00000531779.1; ENST00000614544.1; ENST00000483260.5; ENST00000602858.5; ENST00000256644.8; ENST00000602318.5 | ||
| External Link | RMBase: m6A_site_44651 | ||
| mod ID: M6ASITE041760 | Click to Show/Hide the Full List | ||
| mod site | chr1:110406344-110406345:- | [4] | |
| Sequence | CCATTGTTGGAGTCCTGTGCACAGATTCACAAGGACTTAAT | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | kidney | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000602318.5; ENST00000602858.5; ENST00000483260.5; ENST00000614544.1; ENST00000256644.8; ENST00000531779.1; ENST00000464240.1; ENST00000474861.6 | ||
| External Link | RMBase: m6A_site_44652 | ||
| mod ID: M6ASITE041761 | Click to Show/Hide the Full List | ||
| mod site | chr1:110406455-110406456:- | [3] | |
| Sequence | CTTAATGCCTGGTACATAGAACACCTGTATGTTTGTACTTA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HepG2; A549; H1B; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; iSLK; MSC; TIME; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000464240.1; ENST00000531779.1; ENST00000474861.6; ENST00000614544.1; ENST00000256644.8; ENST00000483260.5; ENST00000602318.5 | ||
| External Link | RMBase: m6A_site_44653 | ||
| mod ID: M6ASITE041762 | Click to Show/Hide the Full List | ||
| mod site | chr1:110406536-110406537:- | [3] | |
| Sequence | CAACCGCGCCCGGCCCTAGAACTTAATTTTTTTCTTAGGGT | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000474861.6; ENST00000483260.5; ENST00000614544.1; ENST00000256644.8; ENST00000602318.5; ENST00000464240.1; ENST00000531779.1 | ||
| External Link | RMBase: m6A_site_44654 | ||
| mod ID: M6ASITE041763 | Click to Show/Hide the Full List | ||
| mod site | chr1:110407443-110407444:- | [5] | |
| Sequence | ACACGGGATGAGGGGGCTAAACTCTACCCAAGGCCGCAGGG | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000256644.8; ENST00000464240.1; ENST00000483260.5; ENST00000474861.6; ENST00000614544.1; ENST00000602318.5; ENST00000531779.1 | ||
| External Link | RMBase: m6A_site_44655 | ||
| mod ID: M6ASITE041764 | Click to Show/Hide the Full List | ||
| mod site | chr1:110407463-110407464:- | [5] | |
| Sequence | GACGTCGCGCGACCCCCGGGACACGGGATGAGGGGGCTAAA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000474861.6; ENST00000483260.5; ENST00000256644.8; ENST00000464240.1; ENST00000602318.5; ENST00000531779.1; ENST00000614544.1 | ||
| External Link | RMBase: m6A_site_44656 | ||
| mod ID: M6ASITE041765 | Click to Show/Hide the Full List | ||
| mod site | chr1:110407536-110407537:- | [3] | |
| Sequence | CCTGAGGTCGCGGCGGAGGAACTTGAGCGGAACGAAAGGCG | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HepG2; H1A; H1B; GM12878; MT4; MM6; Jurkat; GSC-11; TIME; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000602318.5; ENST00000614544.1; ENST00000483260.5; ENST00000464240.1; ENST00000256644.8; ENST00000531779.1; ENST00000474861.6 | ||
| External Link | RMBase: m6A_site_44657 | ||
| mod ID: M6ASITE041766 | Click to Show/Hide the Full List | ||
| mod site | chr1:110407588-110407589:- | [3] | |
| Sequence | CTTGGAGCAGCACTTGGAAGACACGTGAGTAGTGCGCGCCT | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; HepG2; hESC-HEK293T; H1B; H1A; fibroblasts; A549; GM12878; MT4; MM6; Jurkat; GSC-11; HEK293A-TOA; MSC; TIME; TREX; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000483260.5; ENST00000602318.5; ENST00000531779.1; ENST00000256644.8; ENST00000474861.6; ENST00000614544.1; ENST00000464240.1 | ||
| External Link | RMBase: m6A_site_44659 | ||
References
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