Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00247)
Target Name Heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1)
Synonyms
hnRNP A1; Helix-destabilizing protein; Single-strand RNA-binding protein; hnRNP core protein A1
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Gene Name HNRNPA1
Sequence
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGFGGGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF
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Function
Involved in the packaging of pre-mRNA into hnRNP particles, transport of poly(A) mRNA from the nucleus to the cytoplasm and modulation of splice site selection (PubMed:17371836). Plays a role in the splicing of pyruvate kinase PKM by binding repressively to sequences flanking PKM exon 9, inhibiting exon 9 inclusion and resulting in exon 10 inclusion and production of the PKM M2 isoform (PubMed:20010808). Binds to the IRES and thereby inhibits the translation of the apoptosis protease activating factor APAF1 (PubMed:31498791). May bind to specific miRNA hairpins (PubMed:28431233).
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Gene ID 3178
HGNC ID HGNC:5031
Ensembl Gene ID ENSG00000135486
KEGG ID hsa:3178
Chromosomal Location 12q13.13
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00247)
Heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1)
2'-O-Methylation (2'-O-Me)
In total 6 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000059 Click to Show/Hide the Full List
mod site chr12:54281449-54281450:+ [1]
Sequence GTTGAGCTTTGAAACAACTGATGAGAGCCTGAGGAGCCATT
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000547708.5; ENST00000330752.12; ENST00000551702.5; ENST00000548688.5; ENST00000550994.1; ENST00000340913.10; ENST00000547276.5; ENST00000547870.1; ENST00000553061.1; ENST00000546500.5; ENST00000547566.5
External Link RMBase: Nm_site_1354
mod ID: 2OMSITE000064 Click to Show/Hide the Full List
mod site chr12:54284632-54284633:+ [1]
Sequence TTTGTGAACTCAGCCAAGCACAGTGGTGGCAGGGCCTAGCT
Cell/Tissue List HEK293
Seq Type List Nm-seq
Transcript ID List ENST00000553061.1; ENST00000340913.10; ENST00000330752.12; ENST00000547276.5; ENST00000546500.5; ENST00000547566.5
External Link RMBase: Nm_site_1359
mod ID: 2OMSITE000060 Click to Show/Hide the Full List
mod site chr12:54281450-54281451:+ [1]
Sequence TTGAGCTTTGAAACAACTGATGAGAGCCTGAGGAGCCATTT
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000551702.5; ENST00000547870.1; ENST00000340913.10; ENST00000330752.12; ENST00000548688.5; ENST00000547708.5; ENST00000547276.5; ENST00000546500.5; ENST00000553061.1; ENST00000547566.5; ENST00000550994.1
External Link RMBase: Nm_site_1355
mod ID: 2OMSITE000061 Click to Show/Hide the Full List
mod site chr12:54282297-54282298:+ [1]
Sequence TGACTCCGTGGATAAGATTGTCAGTAAGTATCAGATAGTGG
Cell/Tissue List HEK293
Seq Type List Nm-seq
Transcript ID List ENST00000548688.5; ENST00000330752.12; ENST00000340913.10; ENST00000547566.5; ENST00000551702.5; ENST00000547870.1; ENST00000553061.1; ENST00000546500.5; ENST00000547708.5; ENST00000550482.1; ENST00000547276.5
External Link RMBase: Nm_site_1356
mod ID: 2OMSITE000062 Click to Show/Hide the Full List
mod site chr12:54282653-54282654:+ [1]
Sequence CTTCGGTCGTGGAGGAAACTTCAGTGGTCGTGGTATGTATG
Cell/Tissue List HEK293
Seq Type List Nm-seq
Transcript ID List ENST00000553061.1; ENST00000547708.5; ENST00000547566.5; ENST00000340913.10; ENST00000546500.5; ENST00000550482.1; ENST00000330752.12; ENST00000547276.5
External Link RMBase: Nm_site_1357
mod ID: 2OMSITE000063 Click to Show/Hide the Full List
mod site chr12:54283924-54283925:+ [1]
Sequence GAGGCAGAAGCTCTGGCCCCTATGGCGGTGGAGGCCAATAC
Cell/Tissue List HEK293
Seq Type List Nm-seq
Transcript ID List ENST00000340913.10; ENST00000551679.1; ENST00000547276.5; ENST00000553061.1; ENST00000546500.5; ENST00000330752.12; ENST00000547566.5; ENST00000550482.1
External Link RMBase: Nm_site_1358
5-methylcytidine (m5C)
In total 4 m6A sequence/site(s) in this target gene
mod ID: M5CSITE000044 Click to Show/Hide the Full List
mod site chr12:54281375-54281376:+ [2]
Sequence ATTTAACACTTCCCCCTCCCCCCACTCTAGTCTCCTAAAGA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000547708.5; ENST00000546500.5; ENST00000547566.5; ENST00000330752.12; ENST00000551702.5; ENST00000340913.10; ENST00000553061.1; ENST00000550994.1; ENST00000547276.5; ENST00000548688.5; ENST00000547870.1
External Link RMBase: m5C_site_10292
mod ID: M5CSITE000045 Click to Show/Hide the Full List
mod site chr12:54281376-54281377:+ [2]
Sequence TTTAACACTTCCCCCTCCCCCCACTCTAGTCTCCTAAAGAG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000547566.5; ENST00000547276.5; ENST00000550994.1; ENST00000330752.12; ENST00000551702.5; ENST00000340913.10; ENST00000547870.1; ENST00000553061.1; ENST00000547708.5; ENST00000546500.5; ENST00000548688.5
External Link RMBase: m5C_site_10293
mod ID: M5CSITE000046 Click to Show/Hide the Full List
mod site chr12:54281813-54281814:+ [2]
Sequence GGTAATGAGAGATCCAAACACCAAGCGCTCCAGGGGCTTTG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000547870.1; ENST00000553061.1; ENST00000548688.5; ENST00000547708.5; ENST00000546500.5; ENST00000340913.10; ENST00000551702.5; ENST00000330752.12; ENST00000547566.5; ENST00000547276.5; ENST00000550994.1
External Link RMBase: m5C_site_10294
mod ID: M5CSITE000047 Click to Show/Hide the Full List
mod site chr12:54281814-54281815:+ [2]
Sequence GTAATGAGAGATCCAAACACCAAGCGCTCCAGGGGCTTTGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000547566.5; ENST00000551702.5; ENST00000547276.5; ENST00000330752.12; ENST00000547870.1; ENST00000546500.5; ENST00000547708.5; ENST00000553061.1; ENST00000548688.5; ENST00000340913.10; ENST00000550994.1
External Link RMBase: m5C_site_10295
N6-methyladenosine (m6A)
In total 55 m6A sequence/site(s) in this target gene
mod ID: M6ASITE013177 Click to Show/Hide the Full List
mod site chr12:54281029-54281030:+ [3]
Sequence ACCATGAGTTATCATGCGGGACTCGTTACTCGTAGCAAAAT
Motif Score 4.065041667
Cell/Tissue List LCLs
Seq Type List m6A-seq
Transcript ID List ENST00000340913.10; ENST00000547708.5; ENST00000546500.5; ENST00000551702.5; ENST00000553061.1; ENST00000547566.5; ENST00000330752.12; ENST00000548688.5; ENST00000547870.1; ENST00000547276.5
External Link RMBase: m6A_site_191347
mod ID: M6ASITE013178 Click to Show/Hide the Full List
mod site chr12:54281402-54281403:+ [4]
Sequence TAGTCTCCTAAAGAGCCCGAACAGCTGAGGAAGCTCTTCAT
Motif Score 2.951386905
Cell/Tissue List HeLa; CD4T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000553061.1; ENST00000548688.5; ENST00000550994.1; ENST00000551702.5; ENST00000340913.10; ENST00000547276.5; ENST00000547870.1; ENST00000546500.5; ENST00000547566.5; ENST00000547708.5; ENST00000330752.12
External Link RMBase: m6A_site_191348
mod ID: M6ASITE013179 Click to Show/Hide the Full List
mod site chr12:54281442-54281443:+ [4]
Sequence TTGGAGGGTTGAGCTTTGAAACAACTGATGAGAGCCTGAGG
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T; HepG2; CD4T; endometrial
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000551702.5; ENST00000550994.1; ENST00000546500.5; ENST00000547276.5; ENST00000547708.5; ENST00000547566.5; ENST00000340913.10; ENST00000547870.1; ENST00000548688.5; ENST00000330752.12; ENST00000553061.1
External Link RMBase: m6A_site_191349
mod ID: M6ASITE013180 Click to Show/Hide the Full List
mod site chr12:54281494-54281495:+ [4]
Sequence GCAATGGGGAACGCTCACGGACTGTGTGGTAAGATTTGGAA
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; CD4T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000547276.5; ENST00000546500.5; ENST00000548688.5; ENST00000547708.5; ENST00000551702.5; ENST00000547870.1; ENST00000553061.1; ENST00000550994.1; ENST00000547566.5; ENST00000330752.12; ENST00000340913.10
External Link RMBase: m6A_site_191350
mod ID: M6ASITE013181 Click to Show/Hide the Full List
mod site chr12:54281518-54281519:+ [4]
Sequence TGTGGTAAGATTTGGAAGGGACAAAGCAGTAAAACAGCCGA
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; CD4T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000547708.5; ENST00000553061.1; ENST00000330752.12; ENST00000548688.5; ENST00000547870.1; ENST00000550994.1; ENST00000546500.5; ENST00000340913.10; ENST00000547566.5; ENST00000551702.5; ENST00000547276.5
External Link RMBase: m6A_site_191351
mod ID: M6ASITE013182 Click to Show/Hide the Full List
mod site chr12:54281531-54281532:+ [4]
Sequence GGAAGGGACAAAGCAGTAAAACAGCCGATTTCCTTGGCTTA
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; CD4T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000340913.10; ENST00000547566.5; ENST00000330752.12; ENST00000547276.5; ENST00000547870.1; ENST00000551702.5; ENST00000550994.1; ENST00000547708.5; ENST00000546500.5; ENST00000553061.1; ENST00000548688.5
External Link RMBase: m6A_site_191352
mod ID: M6ASITE013183 Click to Show/Hide the Full List
mod site chr12:54281810-54281811:+ [5]
Sequence TCAGGTAATGAGAGATCCAAACACCAAGCGCTCCAGGGGCT
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000546500.5; ENST00000551702.5; ENST00000548688.5; ENST00000340913.10; ENST00000547566.5; ENST00000330752.12; ENST00000547276.5; ENST00000550994.1; ENST00000547870.1; ENST00000547708.5; ENST00000553061.1
External Link RMBase: m6A_site_191353
mod ID: M6ASITE013184 Click to Show/Hide the Full List
mod site chr12:54281842-54281843:+ [5]
Sequence CCAGGGGCTTTGGGTTTGTCACATATGCCACTGTGGAGGAG
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000547708.5; ENST00000547870.1; ENST00000547276.5; ENST00000551702.5; ENST00000548688.5; ENST00000547566.5; ENST00000553061.1; ENST00000550994.1; ENST00000340913.10; ENST00000546500.5; ENST00000330752.12
External Link RMBase: m6A_site_191354
mod ID: M6ASITE013185 Click to Show/Hide the Full List
mod site chr12:54281889-54281890:+ [5]
Sequence GCAGCTATGAATGCAAGGCCACACAAGGTGGATGGAAGAGT
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000548688.5; ENST00000546500.5; ENST00000340913.10; ENST00000550994.1; ENST00000547870.1; ENST00000547276.5; ENST00000547708.5; ENST00000553061.1; ENST00000547566.5; ENST00000551702.5; ENST00000330752.12
External Link RMBase: m6A_site_191355
mod ID: M6ASITE013186 Click to Show/Hide the Full List
mod site chr12:54281916-54281917:+ [3]
Sequence GTGGATGGAAGAGTTGTGGAACCAAAGAGAGCTGTCTCCAG
Motif Score 2.930744048
Cell/Tissue List Huh7; peripheral-blood; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000330752.12; ENST00000550994.1; ENST00000548688.5; ENST00000547708.5; ENST00000547276.5; ENST00000546500.5; ENST00000340913.10; ENST00000553061.1; ENST00000551702.5; ENST00000547566.5; ENST00000547870.1
External Link RMBase: m6A_site_191356
mod ID: M6ASITE013187 Click to Show/Hide the Full List
mod site chr12:54282100-54282101:+ [3]
Sequence TCCTATTAGGATTCTCAAAGACCAGGTGCCCACTTAACTGT
Motif Score 2.876744048
Cell/Tissue List Huh7; peripheral-blood; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000330752.12; ENST00000551702.5; ENST00000548688.5; ENST00000546500.5; ENST00000547276.5; ENST00000547566.5; ENST00000547870.1; ENST00000340913.10; ENST00000553061.1; ENST00000547708.5; ENST00000550994.1
External Link RMBase: m6A_site_191357
mod ID: M6ASITE013188 Click to Show/Hide the Full List
mod site chr12:54282153-54282154:+ [5]
Sequence TGTTGGTGGCATTAAAGAAGACACTGAAGAACATCACCTAA
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T; Huh7; peripheral-blood; endometrial
Seq Type List MAZTER-seq; MeRIP-seq; m6A-seq
Transcript ID List ENST00000330752.12; ENST00000547870.1; ENST00000547708.5; ENST00000340913.10; ENST00000547566.5; ENST00000547276.5; ENST00000550994.1; ENST00000551702.5; ENST00000546500.5; ENST00000553061.1; ENST00000548688.5
External Link RMBase: m6A_site_191358
mod ID: M6ASITE013189 Click to Show/Hide the Full List
mod site chr12:54282163-54282164:+ [3]
Sequence ATTAAAGAAGACACTGAAGAACATCACCTAAGAGATTATTT
Motif Score 2.951386905
Cell/Tissue List Huh7; peripheral-blood; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000547276.5; ENST00000550994.1; ENST00000547870.1; ENST00000340913.10; ENST00000548688.5; ENST00000551702.5; ENST00000547708.5; ENST00000330752.12; ENST00000546500.5; ENST00000547566.5; ENST00000553061.1
External Link RMBase: m6A_site_191359
mod ID: M6ASITE013190 Click to Show/Hide the Full List
mod site chr12:54282187-54282188:+ [6]
Sequence CACCTAAGAGATTATTTTGAACAGTATGGAAAAATTGAAGT
Motif Score 2.951386905
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000547566.5; ENST00000551702.5; ENST00000548688.5; ENST00000330752.12; ENST00000550994.1; ENST00000340913.10; ENST00000553061.1; ENST00000547708.5; ENST00000547870.1; ENST00000546500.5; ENST00000547276.5
External Link RMBase: m6A_site_191360
mod ID: M6ASITE013191 Click to Show/Hide the Full List
mod site chr12:54282420-54282421:+ [5]
Sequence ATACCATACTGTGAATGGCCACAACTGTGAAGTTAGAAAAG
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000547870.1; ENST00000551702.5; ENST00000547708.5; ENST00000340913.10; ENST00000553061.1; ENST00000548688.5; ENST00000547276.5; ENST00000550482.1; ENST00000547566.5; ENST00000546500.5; ENST00000330752.12
External Link RMBase: m6A_site_191361
mod ID: M6ASITE013192 Click to Show/Hide the Full List
mod site chr12:54282590-54282591:+ [4]
Sequence AGGTCGAAGTGGTTCTGGAAACTTTGGTGGTGGTCGTGGAG
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000547566.5; ENST00000330752.12; ENST00000547708.5; ENST00000546500.5; ENST00000547276.5; ENST00000553061.1; ENST00000548688.5; ENST00000550482.1; ENST00000340913.10
External Link RMBase: m6A_site_191362
mod ID: M6ASITE013193 Click to Show/Hide the Full List
mod site chr12:54282629-54282630:+ [5]
Sequence AGGTGGTTTCGGTGGGAATGACAACTTCGGTCGTGGAGGAA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000553061.1; ENST00000340913.10; ENST00000547708.5; ENST00000550482.1; ENST00000330752.12; ENST00000547566.5; ENST00000546500.5; ENST00000547276.5
External Link RMBase: m6A_site_191363
mod ID: M6ASITE013194 Click to Show/Hide the Full List
mod site chr12:54282650-54282651:+ [4]
Sequence CAACTTCGGTCGTGGAGGAAACTTCAGTGGTCGTGGTATGT
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HepG2; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000547566.5; ENST00000547708.5; ENST00000550482.1; ENST00000547276.5; ENST00000340913.10; ENST00000330752.12; ENST00000553061.1; ENST00000546500.5
External Link RMBase: m6A_site_191364
mod ID: M6ASITE013195 Click to Show/Hide the Full List
mod site chr12:54283139-54283140:+ [4]
Sequence AGAGGCTATGGAAGTGGTGGACAGGGTTATGGAAACCAGGG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; U2OS; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000547708.5; ENST00000553061.1; ENST00000547276.5; ENST00000330752.12; ENST00000340913.10; ENST00000550482.1; ENST00000546500.5; ENST00000547566.5
External Link RMBase: m6A_site_191365
mod ID: M6ASITE013196 Click to Show/Hide the Full List
mod site chr12:54283153-54283154:+ [4]
Sequence TGGTGGACAGGGTTATGGAAACCAGGGCAGTGGCTATGGCG
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HepG2; U2OS; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000547276.5; ENST00000330752.12; ENST00000340913.10; ENST00000547708.5; ENST00000547566.5; ENST00000550482.1; ENST00000546500.5; ENST00000553061.1
External Link RMBase: m6A_site_191366
mod ID: M6ASITE013197 Click to Show/Hide the Full List
mod site chr12:54283189-54283190:+ [7]
Sequence TGGCGGGAGTGGCAGCTATGACAGCTATAACAACGGAGGCG
Motif Score 2.859755952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000546500.5; ENST00000547708.5; ENST00000340913.10; ENST00000330752.12; ENST00000547566.5; ENST00000553061.1; ENST00000547276.5; ENST00000550482.1
External Link RMBase: m6A_site_191367
mod ID: M6ASITE013198 Click to Show/Hide the Full List
mod site chr12:54283198-54283199:+ [5]
Sequence TGGCAGCTATGACAGCTATAACAACGGAGGCGGAGGCGGCT
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000547566.5; ENST00000550482.1; ENST00000547708.5; ENST00000330752.12; ENST00000546500.5; ENST00000547276.5; ENST00000553061.1; ENST00000340913.10
External Link RMBase: m6A_site_191368
mod ID: M6ASITE013199 Click to Show/Hide the Full List
mod site chr12:54283749-54283750:+ [4]
Sequence TATTTTATTCTGACTGCTAAACAGAATTGGAAACTAACATC
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; HepG2; U2OS; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000553061.1; ENST00000340913.10; ENST00000330752.12; ENST00000547566.5; ENST00000551679.1; ENST00000547276.5; ENST00000550482.1; ENST00000546500.5; ENST00000547708.5
External Link RMBase: m6A_site_191369
mod ID: M6ASITE013200 Click to Show/Hide the Full List
mod site chr12:54283761-54283762:+ [4]
Sequence ACTGCTAAACAGAATTGGAAACTAACATCATCCTCAGGTAA
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HepG2; U2OS; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000340913.10; ENST00000547566.5; ENST00000546500.5; ENST00000547708.5; ENST00000330752.12; ENST00000553061.1; ENST00000551679.1; ENST00000547276.5; ENST00000550482.1
External Link RMBase: m6A_site_191370
mod ID: M6ASITE013201 Click to Show/Hide the Full List
mod site chr12:54283838-54283839:+ [8]
Sequence TTTTGGAGGTGGTGGAAGCTACAATGATTTTGGGAATTACA
Motif Score 2.078666667
Cell/Tissue List kidney; HEK293T; hESC-HEK293T
Seq Type List m6A-REF-seq; DART-seq; MAZTER-seq
Transcript ID List ENST00000547276.5; ENST00000553061.1; ENST00000330752.12; ENST00000547708.5; ENST00000340913.10; ENST00000546500.5; ENST00000547566.5; ENST00000551679.1; ENST00000550482.1
External Link RMBase: m6A_site_191371
mod ID: M6ASITE013202 Click to Show/Hide the Full List
mod site chr12:54283856-54283857:+ [7]
Sequence CTACAATGATTTTGGGAATTACAACAATCAGTCTTCAAATT
Motif Score 2.07285119
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000550482.1; ENST00000547566.5; ENST00000340913.10; ENST00000553061.1; ENST00000547276.5; ENST00000551679.1; ENST00000330752.12; ENST00000547708.5; ENST00000546500.5
External Link RMBase: m6A_site_191372
mod ID: M6ASITE013203 Click to Show/Hide the Full List
mod site chr12:54283859-54283860:+ [5]
Sequence CAATGATTTTGGGAATTACAACAATCAGTCTTCAAATTTTG
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000547276.5; ENST00000330752.12; ENST00000550482.1; ENST00000547566.5; ENST00000546500.5; ENST00000551679.1; ENST00000340913.10; ENST00000553061.1; ENST00000547708.5
External Link RMBase: m6A_site_191373
mod ID: M6ASITE013204 Click to Show/Hide the Full List
mod site chr12:54283881-54283882:+ [9]
Sequence AATCAGTCTTCAAATTTTGGACCCATGAAGGGAGGAAATTT
Motif Score 3.622404762
Cell/Tissue List CD34; HepG2; U2OS; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000547276.5; ENST00000547566.5; ENST00000546500.5; ENST00000553061.1; ENST00000551679.1; ENST00000550482.1; ENST00000330752.12; ENST00000340913.10
External Link RMBase: m6A_site_191374
mod ID: M6ASITE013205 Click to Show/Hide the Full List
mod site chr12:54283943-54283944:+ [7]
Sequence CTATGGCGGTGGAGGCCAATACTTTGCAAAACCACGAAACC
Motif Score 2.53247619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000330752.12; ENST00000550482.1; ENST00000546500.5; ENST00000553061.1; ENST00000551679.1; ENST00000547276.5; ENST00000547566.5; ENST00000340913.10
External Link RMBase: m6A_site_191375
mod ID: M6ASITE013206 Click to Show/Hide the Full List
mod site chr12:54283953-54283954:+ [9]
Sequence GGAGGCCAATACTTTGCAAAACCACGAAACCAAGGTATGGT
Motif Score 2.185083333
Cell/Tissue List CD34; HEK293T; HepG2; Huh7; endometrial
Seq Type List m6A-seq; DART-seq; MeRIP-seq
Transcript ID List ENST00000546500.5; ENST00000551679.1; ENST00000547276.5; ENST00000547566.5; ENST00000550482.1; ENST00000340913.10; ENST00000330752.12; ENST00000553061.1
External Link RMBase: m6A_site_191376
mod ID: M6ASITE013207 Click to Show/Hide the Full List
mod site chr12:54283956-54283957:+ [7]
Sequence GGCCAATACTTTGCAAAACCACGAAACCAAGGTATGGTATC
Motif Score 2.027047619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000340913.10; ENST00000546500.5; ENST00000330752.12; ENST00000551679.1; ENST00000550482.1; ENST00000547566.5; ENST00000553061.1; ENST00000547276.5
External Link RMBase: m6A_site_191377
mod ID: M6ASITE013208 Click to Show/Hide the Full List
mod site chr12:54283961-54283962:+ [9]
Sequence ATACTTTGCAAAACCACGAAACCAAGGTATGGTATCTATGT
Motif Score 2.185083333
Cell/Tissue List CD34; HEK293T; HepG2; Huh7; endometrial
Seq Type List m6A-seq; DART-seq; MeRIP-seq
Transcript ID List ENST00000547566.5; ENST00000340913.10; ENST00000547276.5; ENST00000553061.1; ENST00000330752.12; ENST00000546500.5; ENST00000550482.1; ENST00000551679.1
External Link RMBase: m6A_site_191378
mod ID: M6ASITE013209 Click to Show/Hide the Full List
mod site chr12:54284368-54284369:+ [9]
Sequence ATTTTTTAAATTGCTGATGAACCCAATAACCCTAATGTAGC
Motif Score 2.930744048
Cell/Tissue List CD34
Seq Type List m6A-seq
Transcript ID List ENST00000547276.5; ENST00000546500.5; ENST00000551679.1; ENST00000553061.1; ENST00000550482.1; ENST00000330752.12; ENST00000340913.10; ENST00000547566.5
External Link RMBase: m6A_site_191379
mod ID: M6ASITE013210 Click to Show/Hide the Full List
mod site chr12:54284472-54284473:+ [4]
Sequence ATCAGCAAAATTTGTGGGAAACAAACTTGATATTGGATTGT
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34
Seq Type List m6A-seq
Transcript ID List ENST00000330752.12; ENST00000553061.1; ENST00000547276.5; ENST00000340913.10; ENST00000550482.1; ENST00000547566.5; ENST00000546500.5
External Link RMBase: m6A_site_191380
mod ID: M6ASITE013211 Click to Show/Hide the Full List
mod site chr12:54284551-54284552:+ [4]
Sequence TCCATATTGTTCAACAGGAAACAAAGCTTAGCAGGAGAGGA
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; hESC-HEK293T; hNPCs
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000553061.1; ENST00000546500.5; ENST00000340913.10; ENST00000547276.5; ENST00000550482.1; ENST00000330752.12; ENST00000547566.5
External Link RMBase: m6A_site_191381
mod ID: M6ASITE013212 Click to Show/Hide the Full List
mod site chr12:54284619-54284620:+ [4]
Sequence AGGTTACAACAGATTTGTGAACTCAGCCAAGCACAGTGGTG
Motif Score 3.373380952
Cell/Tissue List HeLa; hNPCs; fibroblasts
Seq Type List m6A-seq
Transcript ID List ENST00000553061.1; ENST00000547566.5; ENST00000547276.5; ENST00000546500.5; ENST00000340913.10; ENST00000330752.12
External Link RMBase: m6A_site_191382
mod ID: M6ASITE013213 Click to Show/Hide the Full List
mod site chr12:54284665-54284666:+ [10]
Sequence GCCTAGCTGCTACAAAGAAGACATGTTTTAGACAAATACTC
Motif Score 2.897386905
Cell/Tissue List hNPCs
Seq Type List m6A-seq
Transcript ID List ENST00000330752.12; ENST00000547566.5; ENST00000547276.5; ENST00000546500.5; ENST00000553061.1; ENST00000340913.10
External Link RMBase: m6A_site_191383
mod ID: M6ASITE013214 Click to Show/Hide the Full List
mod site chr12:54284676-54284677:+ [5]
Sequence ACAAAGAAGACATGTTTTAGACAAATACTCATGTGTATGGG
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T; hNPCs
Seq Type List MAZTER-seq; m6A-seq
Transcript ID List ENST00000330752.12; ENST00000547566.5; ENST00000547276.5; ENST00000340913.10; ENST00000546500.5; ENST00000553061.1
External Link RMBase: m6A_site_191384
mod ID: M6ASITE013215 Click to Show/Hide the Full List
mod site chr12:54284781-54284782:+ [7]
Sequence GGAAAGTGTAAAGCATTCCAACAAAGGGTTTTAATGTAGAT
Motif Score 2.173910714
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000330752.12; ENST00000553061.1; ENST00000340913.10; ENST00000547566.5; ENST00000546500.5; ENST00000547276.5
External Link RMBase: m6A_site_191385
mod ID: M6ASITE013216 Click to Show/Hide the Full List
mod site chr12:54284932-54284933:+ [7]
Sequence CATCTTGGTAAATTTCCCCAACAGTGTGAAGTTAGAATTCC
Motif Score 2.173910714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000546500.5; ENST00000547276.5; ENST00000340913.10; ENST00000553061.1; ENST00000547566.5
External Link RMBase: m6A_site_191386
mod ID: M6ASITE013217 Click to Show/Hide the Full List
mod site chr12:54284989-54284990:+ [5]
Sequence GTTCTATTTGGAATTTATATACAACCTGCTTGGGTGGAGAA
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000546500.5; ENST00000547276.5; ENST00000553061.1; ENST00000547566.5; ENST00000340913.10
External Link RMBase: m6A_site_191387
mod ID: M6ASITE013218 Click to Show/Hide the Full List
mod site chr12:54285131-54285132:+ [8]
Sequence TTATAAAAGTGATTGTTGGCACATCCTATGCAATATATCTA
Motif Score 2.830589286
Cell/Tissue List liver; hESC-HEK293T
Seq Type List m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000547566.5; ENST00000553061.1; ENST00000340913.10; ENST00000546500.5; ENST00000547276.5
External Link RMBase: m6A_site_191388
mod ID: M6ASITE013219 Click to Show/Hide the Full List
mod site chr12:54285227-54285228:+ [7]
Sequence TTATCATGTGTAATCAATAAACGATTTAATTCTCTTGAATG
Motif Score 2.179660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000547566.5; ENST00000546500.5; ENST00000547276.5; ENST00000553061.1
External Link RMBase: m6A_site_191389
mod ID: M6ASITE013220 Click to Show/Hide the Full List
mod site chr12:54285272-54285273:+ [4]
Sequence GACAACTGTATGGATTTGGGACTGGCAGAGATTTGGACTTT
Motif Score 4.065041667
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000546500.5; ENST00000553061.1; ENST00000547566.5
External Link RMBase: m6A_site_191390
mod ID: M6ASITE013221 Click to Show/Hide the Full List
mod site chr12:54285288-54285289:+ [4]
Sequence TGGGACTGGCAGAGATTTGGACTTTCCCTACCCACTCCCCC
Motif Score 4.065041667
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000546500.5; ENST00000547566.5; ENST00000553061.1
External Link RMBase: m6A_site_191391
mod ID: M6ASITE013222 Click to Show/Hide the Full List
mod site chr12:54285370-54285371:+ [4]
Sequence AGCTCTGCCAGGGAATAGAAACTAGCTGCTGGCTAATGCCG
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000546500.5; ENST00000553061.1; ENST00000547566.5
External Link RMBase: m6A_site_191392
mod ID: M6ASITE013223 Click to Show/Hide the Full List
mod site chr12:54285820-54285821:+ [4]
Sequence GAGATTTGTCTATCAATAGGACTGTATATTCCATCCCATGG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000547566.5; ENST00000546500.5; ENST00000553061.1
External Link RMBase: m6A_site_191393
mod ID: M6ASITE013224 Click to Show/Hide the Full List
mod site chr12:54285958-54285959:+ [4]
Sequence AGTTTGCAATAGCAGGTGGAACCCTAACTATTGAGGGAGTT
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000551665.1; ENST00000546500.5; ENST00000553061.1; ENST00000547566.5; ENST00000551803.1
External Link RMBase: m6A_site_191394
mod ID: M6ASITE013225 Click to Show/Hide the Full List
mod site chr12:54286044-54286045:+ [9]
Sequence GAGATGTTCAGCTACTAGGAACTGCTAGCAAGTATAGCGCG
Motif Score 3.373380952
Cell/Tissue List CD34; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000547566.5; ENST00000551803.1; ENST00000551665.1; ENST00000546500.5; ENST00000553061.1
External Link RMBase: m6A_site_191395
mod ID: M6ASITE013226 Click to Show/Hide the Full List
mod site chr12:54286082-54286083:+ [9]
Sequence GCGAATGGCTCCGAGCTCAGACACTCTACAGCTGAGAGTAG
Motif Score 2.897386905
Cell/Tissue List CD34; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000551803.1; ENST00000551665.1; ENST00000553061.1; ENST00000546500.5; ENST00000547566.5
External Link RMBase: m6A_site_191396
mod ID: M6ASITE013227 Click to Show/Hide the Full List
mod site chr12:54286103-54286104:+ [9]
Sequence CACTCTACAGCTGAGAGTAGACACTTGTGGTATGTGGAGTA
Motif Score 2.897386905
Cell/Tissue List CD34; HepG2; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000553061.1; ENST00000546500.5; ENST00000551665.1; ENST00000551803.1; ENST00000547566.5
External Link RMBase: m6A_site_191397
mod ID: M6ASITE013228 Click to Show/Hide the Full List
mod site chr12:54286210-54286211:+ [9]
Sequence CATCGCAAGGAAGGAGGCAGACAAGAGTAAGGCACACCTGA
Motif Score 2.897386905
Cell/Tissue List CD34; hNPCs; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000546500.5; ENST00000551803.1; ENST00000547566.5; ENST00000553061.1; ENST00000551665.1
External Link RMBase: m6A_site_191398
mod ID: M6ASITE013229 Click to Show/Hide the Full List
mod site chr12:54286239-54286240:+ [10]
Sequence AGGCACACCTGACTCTTAGGACTAGCAGTCAGAACCAGGAG
Motif Score 4.065041667
Cell/Tissue List hNPCs; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000547566.5; ENST00000551803.1; ENST00000551665.1; ENST00000553061.1; ENST00000546500.5
External Link RMBase: m6A_site_191399
mod ID: M6ASITE013230 Click to Show/Hide the Full List
mod site chr12:54286252-54286253:+ [11]
Sequence TCTTAGGACTAGCAGTCAGAACCAGGAGGAAAGGTTTTATT
Motif Score 2.930744048
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000546500.5; ENST00000551803.1; ENST00000551665.1; ENST00000547566.5; ENST00000553061.1
External Link RMBase: m6A_site_191400
mod ID: M6ASITE013231 Click to Show/Hide the Full List
mod site chr12:54286292-54286293:+ [11]
Sequence TGCTATGCGGGTAGGTAAGAACAGATTTTACTTACATCCAT
Motif Score 2.951386905
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000551803.1; ENST00000551665.1; ENST00000547566.5; ENST00000553061.1; ENST00000546500.5
External Link RMBase: m6A_site_191401