Epigenetic Target Information
General Information of the Epigenetic Target (ID: EPITAR00237)
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00237)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE004646 | Click to Show/Hide the Full List | ||
| mod site | chr11:45877007-45877008:+ | [1] | |
| Sequence | CTGTTCCTGCCTTTAAAATCAGAGGCAGGATTCTCTGTTCC | ||
| Transcript ID List | ENST00000417225.6; ENST00000616080.1; rmsk_3540132; ENST00000443527.6; ENST00000616623.4; ENST00000488962.1 | ||
| External Link | RMBase: RNA-editing_site_21348 | ||
5-methylcytidine (m5C)
N6-methyladenosine (m6A)
| In total 37 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE005296 | Click to Show/Hide the Full List | ||
| mod site | chr11:45847484-45847485:+ | [2] | |
| Sequence | GGGTGGCTGGAGCAGTCTGGACAGTCATGGCGGCGACTGTG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000496571.5; ENST00000443527.6; ENST00000616080.1; ENST00000532390.5; ENST00000616623.4; ENST00000473199.5; ENST00000417225.6 | ||
| External Link | RMBase: m6A_site_138640 | ||
| mod ID: M6ASITE005297 | Click to Show/Hide the Full List | ||
| mod site | chr11:45847548-45847549:+ | [3] | |
| Sequence | GGCGCCAGCGCCCGGCACGGACAGCGCCTCTTCGGTGCACT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | Jurkat; GSC-11; HEK293T; iSLK; MSC | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000443527.6; ENST00000417225.6; ENST00000532390.5; ENST00000473199.5; ENST00000616623.4; ENST00000616080.1; ENST00000496571.5 | ||
| External Link | RMBase: m6A_site_138641 | ||
| mod ID: M6ASITE005298 | Click to Show/Hide the Full List | ||
| mod site | chr11:45847650-45847651:+ | [4] | |
| Sequence | GCGCTGCGTGCGCTGCGTTTACATTCTCGACCCGTGGTTCG | ||
| Motif Score | 2.07285119 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000496571.5; ENST00000443527.6; ENST00000616080.1; ENST00000417225.6; ENST00000473199.5; ENST00000616623.4; ENST00000532390.5 | ||
| External Link | RMBase: m6A_site_138642 | ||
| mod ID: M6ASITE005299 | Click to Show/Hide the Full List | ||
| mod site | chr11:45856010-45856011:+ | [4] | |
| Sequence | TCAGTCTCTGGAAGATTTGGACACAAGTTTAAGGAAACTGA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000616623.4; ENST00000417225.6; ENST00000616080.1; ENST00000473199.5; ENST00000532390.5; ENST00000443527.6; ENST00000496571.5 | ||
| External Link | RMBase: m6A_site_138643 | ||
| mod ID: M6ASITE005300 | Click to Show/Hide the Full List | ||
| mod site | chr11:45856115-45856116:+ | [5] | |
| Sequence | CGTGCAGAGCCCCAGAGAAGACAGTGAGATTCTGTCCCTGA | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000616623.4; ENST00000417225.6; ENST00000532390.5; ENST00000616080.1; ENST00000443527.6; ENST00000473199.5; ENST00000496571.5 | ||
| External Link | RMBase: m6A_site_138644 | ||
| mod ID: M6ASITE005301 | Click to Show/Hide the Full List | ||
| mod site | chr11:45858869-45858870:+ | [6] | |
| Sequence | TCATACCCTCTATGACCTGGACAGGTAAGAGATGGGGCCCA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HepG2; kidney; HEK293T; endometrial | ||
| Seq Type List | m6A-seq; m6A-REF-seq | ||
| Transcript ID List | ENST00000443527.6; ENST00000417225.6; ENST00000533779.1; ENST00000473199.5; ENST00000616623.4; ENST00000616080.1; ENST00000532390.5 | ||
| External Link | RMBase: m6A_site_138645 | ||
| mod ID: M6ASITE005302 | Click to Show/Hide the Full List | ||
| mod site | chr11:45860990-45860991:+ | [5] | |
| Sequence | CAGGGCCGAGATCCAGGAGAACCACGACGAGACCTACGGCG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000533779.1; ENST00000417225.6; ENST00000616080.1; ENST00000525110.1; ENST00000616623.4; ENST00000473199.5; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138646 | ||
| mod ID: M6ASITE005303 | Click to Show/Hide the Full List | ||
| mod site | chr11:45861001-45861002:+ | [5] | |
| Sequence | TCCAGGAGAACCACGACGAGACCTACGGCGTGCCCTCCCTG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; CD4T; HEK293T; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000443527.6; ENST00000616080.1; ENST00000417225.6; ENST00000525110.1; ENST00000473199.5; ENST00000533779.1; ENST00000616623.4 | ||
| External Link | RMBase: m6A_site_138647 | ||
| mod ID: M6ASITE005304 | Click to Show/Hide the Full List | ||
| mod site | chr11:45861204-45861205:+ | [5] | |
| Sequence | GTAACCACAATTAATTTTAAACTGTGTCCTTCTAGTATTTG | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000473199.5; ENST00000417225.6; ENST00000533779.1; ENST00000495237.1; ENST00000616080.1; ENST00000443527.6; ENST00000616623.4; ENST00000525110.1 | ||
| External Link | RMBase: m6A_site_138648 | ||
| mod ID: M6ASITE005305 | Click to Show/Hide the Full List | ||
| mod site | chr11:45861780-45861781:+ | [5] | |
| Sequence | TTAGCCTTTTTCACCTGAAAACCACAGTTGTTGCCAGCTAA | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000473199.5; ENST00000525110.1; ENST00000417225.6; ENST00000616080.1; ENST00000495237.1; ENST00000533779.1; ENST00000443527.6; ENST00000616623.4 | ||
| External Link | RMBase: m6A_site_138649 | ||
| mod ID: M6ASITE005307 | Click to Show/Hide the Full List | ||
| mod site | chr11:45861894-45861895:+ | [5] | |
| Sequence | ATAGTGACTGTGGGAAGAGAACCAAGTTGACCTAGAAAACG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000525110.1; ENST00000495237.1; ENST00000616623.4; ENST00000473199.5; ENST00000616080.1; ENST00000417225.6; ENST00000533779.1; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138650 | ||
| mod ID: M6ASITE005308 | Click to Show/Hide the Full List | ||
| mod site | chr11:45861920-45861921:+ | [5] | |
| Sequence | TTGACCTAGAAAACGCTAAAACTTTAAGGATTATCTAACCC | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000443527.6; ENST00000473199.5; ENST00000495237.1; ENST00000616623.4; ENST00000417225.6; ENST00000525110.1; ENST00000533779.1; ENST00000616080.1 | ||
| External Link | RMBase: m6A_site_138651 | ||
| mod ID: M6ASITE005309 | Click to Show/Hide the Full List | ||
| mod site | chr11:45861955-45861956:+ | [5] | |
| Sequence | TAACCCCCAGTAGCACCGAGACACTGTGGTTCAATTCTCAT | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000473199.5; ENST00000495237.1; ENST00000443527.6; ENST00000417225.6; ENST00000525110.1; ENST00000533779.1; ENST00000616623.4; ENST00000616080.1 | ||
| External Link | RMBase: m6A_site_138652 | ||
| mod ID: M6ASITE005310 | Click to Show/Hide the Full List | ||
| mod site | chr11:45862026-45862027:+ | [7] | |
| Sequence | GCTATCACTGAAATGGTCAAACCTCCTGTCTTGTGACCTTT | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000616080.1; ENST00000525110.1; ENST00000417225.6; ENST00000533779.1; ENST00000616623.4; ENST00000495237.1; ENST00000473199.5; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138653 | ||
| mod ID: M6ASITE005311 | Click to Show/Hide the Full List | ||
| mod site | chr11:45862075-45862076:+ | [3] | |
| Sequence | TCAGGGTTCCCCACTGAAGGACTTGGTCCAGCTGTCTGGCA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | Jurkat; CD4T; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000495237.1; ENST00000473199.5; ENST00000616623.4; ENST00000417225.6; ENST00000616080.1; ENST00000525110.1; ENST00000533779.1; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138654 | ||
| mod ID: M6ASITE005312 | Click to Show/Hide the Full List | ||
| mod site | chr11:45862106-45862107:+ | [3] | |
| Sequence | CTGTCTGGCAGGGAGGAGAGACAGAAGCTCTGGCCCGCCTG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | Jurkat; CD4T; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000443527.6; ENST00000616623.4; ENST00000473199.5; ENST00000495237.1; ENST00000616080.1; ENST00000533779.1; ENST00000525110.1; ENST00000417225.6 | ||
| External Link | RMBase: m6A_site_138655 | ||
| mod ID: M6ASITE005313 | Click to Show/Hide the Full List | ||
| mod site | chr11:45867431-45867432:+ | [3] | |
| Sequence | CAAGTCAGAGAATGACATAGACTCGTTGTTTGGTCTGATGG | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | Jurkat; CD4T; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000443527.6; ENST00000496667.1; ENST00000417225.6; ENST00000525110.1; ENST00000495237.1; ENST00000616080.1; ENST00000616623.4 | ||
| External Link | RMBase: m6A_site_138656 | ||
| mod ID: M6ASITE005314 | Click to Show/Hide the Full List | ||
| mod site | chr11:45867476-45867477:+ | [3] | |
| Sequence | TCCGTCTCAAAATCGGCTGGACAAGCACAGTGTTCCATGGC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | CD4T; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000616623.4; ENST00000495237.1; ENST00000417225.6; ENST00000525110.1; ENST00000496667.1; ENST00000616080.1; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138657 | ||
| mod ID: M6ASITE005315 | Click to Show/Hide the Full List | ||
| mod site | chr11:45869614-45869615:+ | [5] | |
| Sequence | GTTTGACCGCATGGAGGGGAACCCCATCTGCATCCAGATCC | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000417225.6; ENST00000496667.1; ENST00000495237.1; ENST00000443527.6; ENST00000616080.1; ENST00000616623.4 | ||
| External Link | RMBase: m6A_site_138658 | ||
| mod ID: M6ASITE005316 | Click to Show/Hide the Full List | ||
| mod site | chr11:45869641-45869642:+ | [5] | |
| Sequence | CTGCATCCAGATCCCCTGGGACCGCAATCCTGAGGCCCTGG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000417225.6; ENST00000616080.1; ENST00000495237.1; ENST00000443527.6; ENST00000616623.4; ENST00000496667.1 | ||
| External Link | RMBase: m6A_site_138659 | ||
| mod ID: M6ASITE005318 | Click to Show/Hide the Full List | ||
| mod site | chr11:45869682-45869683:+ | [5] | |
| Sequence | CCAAGTGGGCTGAGGGCAAGACAGGCTTCCCTTGGATTGAT | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000443527.6; ENST00000417225.6; ENST00000616623.4; ENST00000496667.1; ENST00000616080.1 | ||
| External Link | RMBase: m6A_site_138660 | ||
| mod ID: M6ASITE005319 | Click to Show/Hide the Full List | ||
| mod site | chr11:45869785-45869786:+ | [5] | |
| Sequence | CTGCTTCCTGACCCGCGGGGACCTCTGGGTCAGCTGGGAGA | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000616623.4; ENST00000443527.6; ENST00000417225.6; ENST00000616080.1 | ||
| External Link | RMBase: m6A_site_138661 | ||
| mod ID: M6ASITE005320 | Click to Show/Hide the Full List | ||
| mod site | chr11:45870874-45870875:+ | [5] | |
| Sequence | TGTCCCTTCCTGTGTGGAAGACCTCAGTCACCCTGTGGCAG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000417225.6; ENST00000616623.4; ENST00000616080.1; ENST00000488962.1; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138662 | ||
| mod ID: M6ASITE005321 | Click to Show/Hide the Full List | ||
| mod site | chr11:45872098-45872099:+ | [5] | |
| Sequence | CGCTTCCCTACAGGCCCAAGACCACTACCCAGTGGCCCAGC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000616080.1; ENST00000417225.6; ENST00000443527.6; ENST00000616623.4; ENST00000488962.1 | ||
| External Link | RMBase: m6A_site_138663 | ||
| mod ID: M6ASITE005322 | Click to Show/Hide the Full List | ||
| mod site | chr11:45872152-45872153:+ | [5] | |
| Sequence | AAGCTGGAAGCAGCCGAGGAACCACCTGGTGAAGAACTCAG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2; Huh7; CD4T; peripheral-blood; HEK293T; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000616080.1; ENST00000488962.1; ENST00000417225.6; ENST00000616623.4; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138664 | ||
| mod ID: M6ASITE005323 | Click to Show/Hide the Full List | ||
| mod site | chr11:45872167-45872168:+ | [5] | |
| Sequence | GAGGAACCACCTGGTGAAGAACTCAGCAAACGGGCCCGGGT | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HepG2; Huh7; CD4T; peripheral-blood; HEK293T; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000443527.6; ENST00000616623.4; ENST00000488962.1; ENST00000616080.1; ENST00000417225.6 | ||
| External Link | RMBase: m6A_site_138665 | ||
| mod ID: M6ASITE005324 | Click to Show/Hide the Full List | ||
| mod site | chr11:45880976-45880977:+ | [4] | |
| Sequence | AGCCACCGCAGCAGCAGAGTACAACCTGCAGAGAAGCTGAT | ||
| Motif Score | 2.856142857 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000488962.1; ENST00000417225.6; ENST00000616623.4; ENST00000616080.1; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138666 | ||
| mod ID: M6ASITE005325 | Click to Show/Hide the Full List | ||
| mod site | chr11:45881089-45881090:+ | [4] | |
| Sequence | GTGTGTGCATGCATCTGTTGACACTCATGATTCTGAATGTT | ||
| Motif Score | 2.859755952 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000616623.4; ENST00000417225.6; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138667 | ||
| mod ID: M6ASITE005326 | Click to Show/Hide the Full List | ||
| mod site | chr11:45881573-45881574:+ | [8] | |
| Sequence | TAAAAAGTTTCCACCACCCTACAGAAGTACACACAGATACC | ||
| Motif Score | 2.078666667 | ||
| Cell/Tissue List | liver | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000616623.4; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138668 | ||
| mod ID: M6ASITE005327 | Click to Show/Hide the Full List | ||
| mod site | chr11:45881933-45881934:+ | ||
| Sequence | GCTTCCAGGGCCTGTCCTGGACTTGTCAGCATCCAGACTGC | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000443527.6; ENST00000616623.4 | ||
| External Link | RMBase: m6A_site_138669 | ||
| mod ID: M6ASITE005329 | Click to Show/Hide the Full List | ||
| mod site | chr11:45881949-45881950:+ | ||
| Sequence | CTGGACTTGTCAGCATCCAGACTGCCATGTCAGCTATCCCA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000443527.6; ENST00000616623.4 | ||
| External Link | RMBase: m6A_site_138670 | ||
| mod ID: M6ASITE005330 | Click to Show/Hide the Full List | ||
| mod site | chr11:45881987-45881988:+ | [7] | |
| Sequence | CCAGTAGCTGAGCTCCAAGGACTCAGGCAGAGGGACTCAGG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HEK293T; endometrial | ||
| Seq Type List | MeRIP-seq; m6A-seq | ||
| Transcript ID List | ENST00000616623.4; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138671 | ||
| mod ID: M6ASITE005331 | Click to Show/Hide the Full List | ||
| mod site | chr11:45882001-45882002:+ | [7] | |
| Sequence | CCAAGGACTCAGGCAGAGGGACTCAGGGATGGGGACTGCCA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HEK293T; endometrial | ||
| Seq Type List | MeRIP-seq; m6A-seq | ||
| Transcript ID List | ENST00000616623.4; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138672 | ||
| mod ID: M6ASITE005332 | Click to Show/Hide the Full List | ||
| mod site | chr11:45882015-45882016:+ | [7] | |
| Sequence | AGAGGGACTCAGGGATGGGGACTGCCAGGGGCAGTTGGCAA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HEK293T; endometrial | ||
| Seq Type List | MeRIP-seq; m6A-seq | ||
| Transcript ID List | ENST00000616623.4; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138673 | ||
| mod ID: M6ASITE005333 | Click to Show/Hide the Full List | ||
| mod site | chr11:45882062-45882063:+ | [7] | |
| Sequence | AAGTAGAGATTACACCCAGAACACCATTCCTTCCAGGAGCA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000616623.4; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138674 | ||
| mod ID: M6ASITE005334 | Click to Show/Hide the Full List | ||
| mod site | chr11:45882465-45882466:+ | [9] | |
| Sequence | TCACTGTCCTCTGTCCTTGGACCAGAACCCTGGGGTCAGAC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000616623.4; ENST00000443527.6 | ||
| External Link | RMBase: m6A_site_138675 | ||
| mod ID: M6ASITE005335 | Click to Show/Hide the Full List | ||
| mod site | chr11:45882744-45882745:+ | [5] | |
| Sequence | CCAGAAAGAGAGTCAAGCAAACCTGGAAGGGCAAATCTGAG | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; Jurkat; endometrial | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000443527.6; ENST00000616623.4 | ||
| External Link | RMBase: m6A_site_138676 | ||
References
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