Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00233)
Target Name ELAV-like protein 1 (HuR/ELAVL1)
Synonyms
Hu-antigen R; HuR; HUR
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Gene Name ELAVL1
Sequence
MSNGYEDHMAEDCRGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNKSHK
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Family RRM elav family
Function
RNA-binding protein that binds to the 3'-UTR region of mRNAs and increases their stability. Involved in embryonic stem cells (ESCs) differentiation: preferentially binds mRNAs that are not methylated by N6-methyladenosine (m6A), stabilizing them, promoting ESCs differentiation (By similarity). Binds to poly-U elements and AU-rich elements (AREs) in the 3'-UTR of target mRNAs. Binds avidly to the AU-rich element in FOS and IL3/interleukin-3 mRNAs. In the case of the FOS AU-rich element, binds to a core element of 27 nucleotides that contain AUUUA, AUUUUA, and AUUUUUA motifs. Binds preferentially to the 5'-UUUU[AG]UUU-3' motif in vitro. With ZNF385A, binds the 3'-UTR of p53/TP53 mRNA to control their nuclear export induced by CDKN2A. Hence, may regulate p53/TP53 expression and mediate in part the CDKN2A anti-proliferative activity. May also bind with ZNF385A the CCNB1 mRNA (By similarity). Increases the stability of the leptin mRNA harboring an AU-rich element (ARE) in its 3' UTR.
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Gene ID 1994
HGNC ID HGNC:3312
Ensembl Gene ID ENSG00000066044
KEGG ID hsa:1994
Chromosomal Location 19p13.2
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00233)
ELAV-like protein 1 (HuR/ELAVL1)
N4-acetylcytidine (ac4C)
In total 2 m6A sequence/site(s) in this target gene
mod ID: AC4SITE000248 Click to Show/Hide the Full List
mod site chr19:7963326-7963327:- [1]
Sequence TTTATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAA
Cell/Tissue List HEK293T
Seq Type List ac4C-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5; ENST00000596459.5
External Link RMBase: ac4C_site_940
mod ID: AC4SITE000249 Click to Show/Hide the Full List
mod site chr19:7973821-7973822:-
Sequence GACGCCAACTTGTACATCAGCGGGCTCCCGCGGACCATGAC
Cell/Tissue List DLD1
Seq Type List acRIP-seq
Transcript ID List ENST00000593807.1; ENST00000407627.7; ENST00000596459.5; ENST00000596154.5
External Link RMBase: ac4C_site_941
Adenosine-to-Inosine editing (A-to-I)
In total 1 m6A sequence/site(s) in this target gene
mod ID: A2ISITE008927 Click to Show/Hide the Full List
mod site chr19:7976886-7976887:- [2]
Sequence AAGTCTAACCTGAGCAACATAGCAAGACCCTGTCTCTACAA
Transcript ID List ENST00000596459.5; ENST00000407627.7; rmsk_4929596; ENST00000593807.1; ENST00000596154.5
External Link RMBase: RNA-editing_site_65458
5-methylcytidine (m5C)
In total 5 m6A sequence/site(s) in this target gene
mod ID: M5CSITE001726 Click to Show/Hide the Full List
mod site chr19:7962913-7962914:-
Sequence GGAATGGCGGCGGGCCCGTCCAGCGTGGGCCACCACTGGGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m5C_site_22403
mod ID: M5CSITE001727 Click to Show/Hide the Full List
mod site chr19:7962914-7962915:-
Sequence GGGAATGGCGGCGGGCCCGTCCAGCGTGGGCCACCACTGGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m5C_site_22404
mod ID: M5CSITE001728 Click to Show/Hide the Full List
mod site chr19:7962919-7962920:-
Sequence GTCCTGGGAATGGCGGCGGGCCCGTCCAGCGTGGGCCACCA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m5C_site_22405
mod ID: M5CSITE001729 Click to Show/Hide the Full List
mod site chr19:7963182-7963183:-
Sequence GGATGGTGGTGAACCTGAAGCATGCTTTAACCTCTAAGACT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000596154.5; ENST00000596459.5; ENST00000407627.7
External Link RMBase: m5C_site_22406
mod ID: M5CSITE001730 Click to Show/Hide the Full List
mod site chr19:8005651-8005652:- [3]
Sequence GGCGTGTCCGGGCCGCGGGCCGGAGCGGGTCGTGCGCGCTG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000593807.1
External Link RMBase: m5C_site_22407
N6-methyladenosine (m6A)
In total 72 m6A sequence/site(s) in this target gene
mod ID: M6ASITE039167 Click to Show/Hide the Full List
mod site chr19:7959403-7959404:- [4]
Sequence GACCATGTGATGTTCCGTTTACAGTGACTTGCTTTGGGGGA
Motif Score 2.07285119
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000407627.7
External Link RMBase: m6A_site_415962
mod ID: M6ASITE039168 Click to Show/Hide the Full List
mod site chr19:7959665-7959666:- [5]
Sequence TCGGATCCCAGGCAGGGTTCACATTTCCAAACCTTTTTGAT
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000407627.7
External Link RMBase: m6A_site_415963
mod ID: M6ASITE039169 Click to Show/Hide the Full List
mod site chr19:7959749-7959750:- [5]
Sequence CGCAAGACAGCCCTGAAGTCACAAGTGCTTTCTTTTAAGTG
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000407627.7
External Link RMBase: m6A_site_415964
mod ID: M6ASITE039170 Click to Show/Hide the Full List
mod site chr19:7960079-7960080:- [6]
Sequence GTCCACCAGGCATTGAAAAGACATGACTTACCCAGTCCGGC
Motif Score 2.897386905
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000407627.7
External Link RMBase: m6A_site_415965
mod ID: M6ASITE039171 Click to Show/Hide the Full List
mod site chr19:7960784-7960785:- [7]
Sequence ACCATTTCTTAAAAAATTTTACATAGATCAGTTGTATTTCT
Motif Score 2.07285119
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000407627.7
External Link RMBase: m6A_site_415966
mod ID: M6ASITE039172 Click to Show/Hide the Full List
mod site chr19:7960871-7960872:- [5]
Sequence CTGTGTCCTCAAAGTTCATTACATCTTATCAAGGCCTGTTT
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000407627.7
External Link RMBase: m6A_site_415967
mod ID: M6ASITE039173 Click to Show/Hide the Full List
mod site chr19:7960947-7960948:- [5]
Sequence TTGTGGAAGGATTTAGCTTAACAACTGTCACTCCTGAAAAG
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415968
mod ID: M6ASITE039174 Click to Show/Hide the Full List
mod site chr19:7961260-7961261:- [5]
Sequence CCCCCTGGAGTCTCACTCCCACACATGCCCATAGCTAGCAT
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415969
mod ID: M6ASITE039175 Click to Show/Hide the Full List
mod site chr19:7961283-7961284:- [8]
Sequence GCGGGATTCCCGCTTCTGAAACTCCCCCTGGAGTCTCACTC
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415970
mod ID: M6ASITE039176 Click to Show/Hide the Full List
mod site chr19:7961433-7961434:- [5]
Sequence CTGATGGAAGGTGGGAGCCAACACCCTTCTGATGGAAGGTG
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415971
mod ID: M6ASITE039177 Click to Show/Hide the Full List
mod site chr19:7961941-7961942:- [7]
Sequence ACCAGCAGTTTTTAACCTTGACGTGAGACTAAAACGTGACC
Motif Score 2.833690476
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415972
mod ID: M6ASITE039178 Click to Show/Hide the Full List
mod site chr19:7961968-7961969:- [7]
Sequence AGAGAATCACAAACAGGATAACTTAGTACCAGCAGTTTTTA
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415973
mod ID: M6ASITE039179 Click to Show/Hide the Full List
mod site chr19:7962301-7962302:- [7]
Sequence TTTTTACTTTTGCATTTAAGACCATTAAATTTGATTTTGTT
Motif Score 2.876744048
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415974
mod ID: M6ASITE039180 Click to Show/Hide the Full List
mod site chr19:7962379-7962380:- [7]
Sequence TTCTCTTCATAACTGCCTTGACATTTTGGGTTGTTCTGTTC
Motif Score 2.859755952
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415975
mod ID: M6ASITE039181 Click to Show/Hide the Full List
mod site chr19:7962436-7962437:- [8]
Sequence CCAGTTATCTATTAACCAAAACCTTTGATTTGTAGTTTTAA
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415976
mod ID: M6ASITE039182 Click to Show/Hide the Full List
mod site chr19:7962464-7962465:- [7]
Sequence CACTCAGCAGAAAAGTACTTACTTCTTGCCAGTTATCTATT
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415977
mod ID: M6ASITE039183 Click to Show/Hide the Full List
mod site chr19:7962483-7962484:- [7]
Sequence AATTTTGCTTTTGTATGAACACTCAGCAGAAAAGTACTTAC
Motif Score 2.506922619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415978
mod ID: M6ASITE039184 Click to Show/Hide the Full List
mod site chr19:7962485-7962486:- [8]
Sequence GGAATTTTGCTTTTGTATGAACACTCAGCAGAAAAGTACTT
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T
Seq Type List m6A-seq; DART-seq; MAZTER-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415979
mod ID: M6ASITE039185 Click to Show/Hide the Full List
mod site chr19:7962536-7962537:- [8]
Sequence CCCTTCTCGTGAGCGCTTAGACCTTTTTCTATTTTAGTCGG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415980
mod ID: M6ASITE039186 Click to Show/Hide the Full List
mod site chr19:7962582-7962583:- [8]
Sequence TGTATTTTAATAACACAGAAACATTTGAGCATTGTATTTCT
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415981
mod ID: M6ASITE039187 Click to Show/Hide the Full List
mod site chr19:7962590-7962591:- [7]
Sequence AATGGCTCTGTATTTTAATAACACAGAAACATTTGAGCATT
Motif Score 2.168095238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415982
mod ID: M6ASITE039188 Click to Show/Hide the Full List
mod site chr19:7962629-7962630:- [5]
Sequence CCCGTTTTCCAGAGCATTTAACATAGCTTGGAGGCGTAAAA
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415983
mod ID: M6ASITE039189 Click to Show/Hide the Full List
mod site chr19:7962705-7962706:- [5]
Sequence GACATCCCGAGTTTCTGTCCACACATTGCATGCACAGCGCC
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415984
mod ID: M6ASITE039190 Click to Show/Hide the Full List
mod site chr19:7962724-7962725:- [5]
Sequence GAAGATGTGTTGCTACTCTGACATCCCGAGTTTCTGTCCAC
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415985
mod ID: M6ASITE039191 Click to Show/Hide the Full List
mod site chr19:7962848-7962849:- [8]
Sequence GGCGGGCCCTCCAGAGAAGGACACAAACGTGTTTCGTAAGC
Motif Score 3.643047619
Cell/Tissue List HeLa; hESC-HEK293T; MM6
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415986
mod ID: M6ASITE039192 Click to Show/Hide the Full List
mod site chr19:7963073-7963074:- [7]
Sequence TTTTAATCTAAAGATGTTAGACAGATGCTGAGTGTGCGTTT
Motif Score 2.897386905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415987
mod ID: M6ASITE039193 Click to Show/Hide the Full List
mod site chr19:7963128-7963129:- [8]
Sequence TTCATTCAATGTCTCCACAGACTGGGTAGCAAAAAAATCAC
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549
Seq Type List m6A-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415988
mod ID: M6ASITE039194 Click to Show/Hide the Full List
mod site chr19:7963132-7963133:- [4]
Sequence GCGTTTCATTCAATGTCTCCACAGACTGGGTAGCAAAAAAA
Motif Score 2.053113095
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415989
mod ID: M6ASITE039195 Click to Show/Hide the Full List
mod site chr19:7963156-7963157:- [4]
Sequence TTAACCTCTAAGACTGTCTAACACGCGTTTCATTCAATGTC
Motif Score 2.168095238
Cell/Tissue List kidney; hESC-HEK293T
Seq Type List m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415990
mod ID: M6ASITE039196 Click to Show/Hide the Full List
mod site chr19:7963164-7963165:- [8]
Sequence AGCATGCTTTAACCTCTAAGACTGTCTAACACGCGTTTCAT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549
Seq Type List m6A-seq
Transcript ID List ENST00000407627.7; ENST00000596459.5; ENST00000596154.5
External Link RMBase: m6A_site_415991
mod ID: M6ASITE039197 Click to Show/Hide the Full List
mod site chr19:7963190-7963191:- [8]
Sequence GTCCCTCTGGATGGTGGTGAACCTGAAGCATGCTTTAACCT
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549
Seq Type List m6A-seq
Transcript ID List ENST00000596459.5; ENST00000407627.7; ENST00000596154.5
External Link RMBase: m6A_site_415992
mod ID: M6ASITE039198 Click to Show/Hide the Full List
mod site chr19:7963218-7963219:- [7]
Sequence ATCTAAGTAGAACTGCATTGACTAACCAGTCCCTCTGGATG
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000407627.7; ENST00000596459.5; ENST00000596154.5
External Link RMBase: m6A_site_415993
mod ID: M6ASITE039199 Click to Show/Hide the Full List
mod site chr19:7963227-7963228:- [8]
Sequence TAAACAGAAATCTAAGTAGAACTGCATTGACTAACCAGTCC
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549
Seq Type List m6A-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7; ENST00000596459.5
External Link RMBase: m6A_site_415994
mod ID: M6ASITE039200 Click to Show/Hide the Full List
mod site chr19:7963244-7963245:- [8]
Sequence TCCTTTAAGATATATATTAAACAGAAATCTAAGTAGAACTG
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; HepG2
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5; ENST00000596459.5
External Link RMBase: m6A_site_415995
mod ID: M6ASITE039201 Click to Show/Hide the Full List
mod site chr19:7963290-7963291:- [8]
Sequence TTGAAATCCCACAATGTTAGACCAATCTTAAGTTTCGTAAG
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000407627.7; ENST00000596459.5; ENST00000596154.5
External Link RMBase: m6A_site_415996
mod ID: M6ASITE039202 Click to Show/Hide the Full List
mod site chr19:7963300-7963301:- [5]
Sequence GTTCAAATGTTTGAAATCCCACAATGTTAGACCAATCTTAA
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596459.5; ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415997
mod ID: M6ASITE039203 Click to Show/Hide the Full List
mod site chr19:7963324-7963325:- [5]
Sequence TATACTCTGGGATGCAACCGACATGTTCAAATGTTTGAAAT
Motif Score 2.865571429
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596459.5; ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_415998
mod ID: M6ASITE039204 Click to Show/Hide the Full List
mod site chr19:7963386-7963387:- [5]
Sequence CTCATTTTGCGCCAATTTTCACAAGTGTTTGTCTTTGTCTG
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000407627.7; ENST00000596459.5; ENST00000596154.5
External Link RMBase: m6A_site_415999
mod ID: M6ASITE039206 Click to Show/Hide the Full List
mod site chr19:7963407-7963408:- [7]
Sequence ACTTTTCTTGTTAGTGTACAACTCATTTTGCGCCAATTTTC
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7; ENST00000596459.5
External Link RMBase: m6A_site_416000
mod ID: M6ASITE039207 Click to Show/Hide the Full List
mod site chr19:7963410-7963411:- [5]
Sequence GAAACTTTTCTTGTTAGTGTACAACTCATTTTGCGCCAATT
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596459.5; ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_416001
mod ID: M6ASITE039208 Click to Show/Hide the Full List
mod site chr19:7963427-7963428:- [9]
Sequence TTAAGAGTGAAGGAGTTGAAACTTTTCTTGTTAGTGTACAA
Motif Score 2.627720238
Cell/Tissue List HeLa; A549; HEK293T; LCLs; H1299; iSLK
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000407627.7; ENST00000596459.5; ENST00000596154.5
External Link RMBase: m6A_site_416002
mod ID: M6ASITE039209 Click to Show/Hide the Full List
mod site chr19:7963460-7963461:- [7]
Sequence TCGCTCATGCTTTTTTTTGTACGGAATAGATAATTAAGAGT
Motif Score 2.830077381
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7; ENST00000596459.5
External Link RMBase: m6A_site_416003
mod ID: M6ASITE039210 Click to Show/Hide the Full List
mod site chr19:7963489-7963490:- [5]
Sequence CTTCAAAACCAACAAGTCCCACAAATAACTCGCTCATGCTT
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5; ENST00000596459.5
External Link RMBase: m6A_site_416004
mod ID: M6ASITE039211 Click to Show/Hide the Full List
mod site chr19:7963502-7963503:- [9]
Sequence TCTTACAGGTTTCCTTCAAAACCAACAAGTCCCACAAATAA
Motif Score 2.185083333
Cell/Tissue List HEK293T; HeLa; A549; HepG2; hNPCs; hESCs; fibroblasts; LCLs; MT4; H1299; MM6; HEK293A-TOA; iSLK; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000596459.5; ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_416005
mod ID: M6ASITE039212 Click to Show/Hide the Full List
mod site chr19:7963528-7963529:- [9]
Sequence GAACGGCTACCGCCTGGGGGACAAAATCTTACAGGTTTCCT
Motif Score 3.643047619
Cell/Tissue List HEK293T; HeLa; A549; hESC-HEK293T; HepG2; hNPCs; hESCs; fibroblasts; LCLs; MT4; H1299; MM6; HEK293A-TOA; iSLK; TREX; AML
Seq Type List MeRIP-seq; MAZTER-seq; m6A-seq; miCLIP
Transcript ID List ENST00000596459.5; ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_416006
mod ID: M6ASITE039213 Click to Show/Hide the Full List
mod site chr19:7963582-7963583:- [9]
Sequence TGGCTTTGTGACCATGACAAACTATGAAGAAGCCGCGATGG
Motif Score 2.627720238
Cell/Tissue List HEK293T; HeLa; HepG2; hNPCs; hESCs; fibroblasts; A549; CD8T; MT4; MM6; Huh7; HEK293A-TOA; TREX
Seq Type List MeRIP-seq; m6A-seq; m6A-CLIP/IP
Transcript ID List ENST00000596459.5; ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_416007
mod ID: M6ASITE039214 Click to Show/Hide the Full List
mod site chr19:7963586-7963587:- [5]
Sequence GGTTTGGCTTTGTGACCATGACAAACTATGAAGAAGCCGCG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596154.5; ENST00000407627.7; ENST00000596459.5
External Link RMBase: m6A_site_416008
mod ID: M6ASITE039215 Click to Show/Hide the Full List
mod site chr19:7963592-7963593:- [10]
Sequence GCAAAGGGTTTGGCTTTGTGACCATGACAAACTATGAAGAA
Motif Score 2.839113095
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000407627.7; ENST00000596459.5; ENST00000596154.5
External Link RMBase: m6A_site_416009
mod ID: M6ASITE039216 Click to Show/Hide the Full List
mod site chr19:7963618-7963619:- [5]
Sequence GATCCGCGACTTCAACACCAACAAGTGCAAAGGGTTTGGCT
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596459.5; ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_416010
mod ID: M6ASITE039217 Click to Show/Hide the Full List
mod site chr19:7963624-7963625:- [5]
Sequence GAAAGTGATCCGCGACTTCAACACCAACAAGTGCAAAGGGT
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5; ENST00000596459.5
External Link RMBase: m6A_site_416011
mod ID: M6ASITE039218 Click to Show/Hide the Full List
mod site chr19:7963717-7963718:- [5]
Sequence CGGCTGGTGCATTTTCATCTACAACCTGGGGCAGGATGCCG
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000407627.7; ENST00000593807.1; ENST00000596154.5; ENST00000596459.5
External Link RMBase: m6A_site_416012
mod ID: M6ASITE039219 Click to Show/Hide the Full List
mod site chr19:7963783-7963784:- [5]
Sequence CTCCCCCATGGGCGTCGATCACATGAGCGGGCTCTCTGGCG
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596154.5; ENST00000593807.1; ENST00000407627.7; ENST00000596459.5
External Link RMBase: m6A_site_416013
mod ID: M6ASITE039220 Click to Show/Hide the Full List
mod site chr19:7967651-7967652:- [5]
Sequence TGCAGCCAACCCCAACCAGAACAAAAACGTGGCACTCCTCT
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T; Huh7
Seq Type List MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000596154.5; ENST00000593807.1; ENST00000596459.5; ENST00000407627.7
External Link RMBase: m6A_site_416014
mod ID: M6ASITE039221 Click to Show/Hide the Full List
mod site chr19:7967707-7967708:- [11]
Sequence ACCAGTTTCAATGGTCATAAACCCCCAGGTTCCTCTGAGCC
Motif Score 2.185083333
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000596154.5; ENST00000596459.5; ENST00000407627.7; ENST00000593807.1
External Link RMBase: m6A_site_416015
mod ID: M6ASITE039222 Click to Show/Hide the Full List
mod site chr19:7967752-7967753:- [7]
Sequence GCGTTTATCCGGTTTGACAAACGGTCGGAGGCAGAAGAGGC
Motif Score 2.179660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000407627.7; ENST00000596459.5; ENST00000596154.5; ENST00000593807.1
External Link RMBase: m6A_site_416016
mod ID: M6ASITE039223 Click to Show/Hide the Full List
mod site chr19:7967756-7967757:- [5]
Sequence GGTTGCGTTTATCCGGTTTGACAAACGGTCGGAGGCAGAAG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596154.5; ENST00000593807.1; ENST00000407627.7; ENST00000596459.5
External Link RMBase: m6A_site_416017
mod ID: M6ASITE039224 Click to Show/Hide the Full List
mod site chr19:7972908-7972909:- [11]
Sequence GAGGCAGGAGAATCGCCTGGACCCCAGGAGGCGGAGATTGC
Motif Score 3.622404762
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5; rmsk_4929588; ENST00000595499.1; ENST00000593807.1; ENST00000596459.5
External Link RMBase: m6A_site_416018
mod ID: M6ASITE039225 Click to Show/Hide the Full List
mod site chr19:7973727-7973728:- [4]
Sequence GGGTCCTCGTGGATCAGACTACAGGTACCAGAGGGGCCCCA
Motif Score 2.078666667
Cell/Tissue List liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000595499.1; ENST00000596154.5; ENST00000593807.1; ENST00000596459.5; ENST00000407627.7
External Link RMBase: m6A_site_416019
mod ID: M6ASITE039226 Click to Show/Hide the Full List
mod site chr19:7973783-7973784:- [5]
Sequence GACCCAGAAGGACGTAGAAGACATGTTCTCTCGGTTTGGGC
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T; HepG2
Seq Type List MAZTER-seq; m6A-seq
Transcript ID List ENST00000595499.1; ENST00000407627.7; ENST00000593807.1; ENST00000596459.5; ENST00000596154.5
External Link RMBase: m6A_site_416020
mod ID: M6ASITE039227 Click to Show/Hide the Full List
mod site chr19:7973808-7973809:- [12]
Sequence ACATCAGCGGGCTCCCGCGGACCATGACCCAGAAGGACGTA
Motif Score 3.622404762
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000407627.7; ENST00000593807.1; ENST00000596154.5; ENST00000596459.5
External Link RMBase: m6A_site_416021
mod ID: M6ASITE039228 Click to Show/Hide the Full List
mod site chr19:7973828-7973829:- [5]
Sequence GATCAAAGACGCCAACTTGTACATCAGCGGGCTCCCGCGGA
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000593807.1; ENST00000596459.5; ENST00000596154.5; ENST00000407627.7
External Link RMBase: m6A_site_416022
mod ID: M6ASITE039229 Click to Show/Hide the Full List
mod site chr19:7981090-7981091:- [12]
Sequence GCTTGAGGCTCCAGTCAAAAACCATTAAGGTAAAGGGATCT
Motif Score 2.185083333
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000407627.7; ENST00000596154.5; ENST00000596459.5; ENST00000593807.1
External Link RMBase: m6A_site_416023
mod ID: M6ASITE039230 Click to Show/Hide the Full List
mod site chr19:7981122-7981123:- [5]
Sequence GGATGCAGAGAGAGCGATCAACACGCTGAACGGCTTGAGGC
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596459.5; ENST00000407627.7; ENST00000593807.1
External Link RMBase: m6A_site_416024
mod ID: M6ASITE039231 Click to Show/Hide the Full List
mod site chr19:7981158-7981159:- [8]
Sequence CTTGGGCTATGGCTTTGTGAACTACGTGACCGCGAAGGATG
Motif Score 3.373380952
Cell/Tissue List HeLa; MT4; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000596459.5; ENST00000593807.1; ENST00000407627.7
External Link RMBase: m6A_site_416025
mod ID: M6ASITE039232 Click to Show/Hide the Full List
mod site chr19:7981184-7981185:- [5]
Sequence TTCATGTTCTCTTGCACAGGACACAGCTTGGGCTATGGCTT
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000593807.1; ENST00000596459.5; ENST00000407627.7
External Link RMBase: m6A_site_416026
mod ID: M6ASITE039233 Click to Show/Hide the Full List
mod site chr19:7991665-7991666:- [8]
Sequence GGTGAAGTTGAATCTGCAAAACTTATTCGGGATAAAGTAGC
Motif Score 2.627720238
Cell/Tissue List HeLa; MT4; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593807.1; ENST00000596459.5; ENST00000407627.7
External Link RMBase: m6A_site_416027
mod ID: M6ASITE039234 Click to Show/Hide the Full List
mod site chr19:7991726-7991727:- [8]
Sequence CGTCAACTACCTCCCTCAGAACATGACCCAGGATGAGTTAC
Motif Score 2.951386905
Cell/Tissue List HeLa; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000593807.1; ENST00000407627.7; ENST00000596459.5
External Link RMBase: m6A_site_416028
mod ID: M6ASITE039235 Click to Show/Hide the Full List
mod site chr19:7991768-7991769:- [5]
Sequence GGCCGAAGACTGCAGGGGTGACATCGGGAGAACGAATTTGA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596459.5; ENST00000407627.7; ENST00000593807.1
External Link RMBase: m6A_site_416029
mod ID: M6ASITE039236 Click to Show/Hide the Full List
mod site chr19:7991780-7991781:- [8]
Sequence TGAAGACCACATGGCCGAAGACTGCAGGGGTGACATCGGGA
Motif Score 3.319380952
Cell/Tissue List HeLa; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000596459.5; ENST00000407627.7; ENST00000593807.1
External Link RMBase: m6A_site_416030
mod ID: M6ASITE039237 Click to Show/Hide the Full List
mod site chr19:7991792-7991793:- [4]
Sequence GTCTAATGGTTATGAAGACCACATGGCCGAAGACTGCAGGG
Motif Score 2.053113095
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000596459.5; ENST00000593807.1; ENST00000407627.7
External Link RMBase: m6A_site_416031
mod ID: M6ASITE039238 Click to Show/Hide the Full List
mod site chr19:7991795-7991796:- [8]
Sequence AATGTCTAATGGTTATGAAGACCACATGGCCGAAGACTGCA
Motif Score 2.876744048
Cell/Tissue List HeLa; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000407627.7; ENST00000596459.5; ENST00000593807.1
External Link RMBase: m6A_site_416032
mod ID: M6ASITE039239 Click to Show/Hide the Full List
mod site chr19:7991817-7991818:- [5]
Sequence TTGGCAGATTTTTGAAAAATACAATGTCTAATGGTTATGAA
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000593807.1; ENST00000596459.5; ENST00000407627.7
External Link RMBase: m6A_site_416033