General Information of the Epigenetic Target (ID: EPITAR00232)
Target Name YTH domain-containing family protein 2 (YTHDF2)
Synonyms
DF2; CLL-associated antigen KW-14; High-glucose-regulated protein 8; Renal carcinoma antigen NY-REN-2
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Gene Name YTHDF2
Sequence
MSASSLLEQRPKGQGNKVQNGSVHQKDGLNDDDFEPYLSPQARPNNAYTAMSDSYLPSYYSPSIGFSYSLGEAAWSTGGDTAMPYLTSYGQLSNGEPHFLPDAMFGQPGALGSTPFLGQHGFNFFPSGIDFSAWGNNSSQGQSTQSSGYSSNYAYAPSSLGGAMIDGQSAFANETLNKAPGMNTIDQGMAALKLGSTEVASNVPKVVGSAVGSGSITSNIVASNSLPPATIAPPKPASWADIASKPAKQQPKLKTKNGIAGSSLPPPPIKHNMDIGTWDNKGPVAKAPSQALVQNIGQPTQGSPQPVGQQANNSPPVAQASVGQQTQPLPPPPPQPAQLSVQQQAAQPTRWVAPRNRGSGFGHNGVDGNGVGQSQAGSGSTPSEPHPVLEKLRSINNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQGRGK
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Family YTHDF family, YTHDF2 subfamily
Function
Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates their stability (PubMed:24284625, PubMed:26046440, PubMed:26318451, PubMed:32492408). M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing (PubMed:22575960, PubMed:24284625, PubMed:32492408, PubMed:25412658, PubMed:25412661). Acts as a regulator of mRNA stability by promoting degradation of m6A-containing mRNAs via interaction with the CCR4-NOT and ribonuclease P/MRP complexes, depending on the context (PubMed:24284625, PubMed:26046440, PubMed:27558897, PubMed:30930054, PubMed:32492408). The YTHDF paralogs (YTHDF1, YTHDF2 and YTHDF3) share m6A-containing mRNAs targets and act redundantly to mediate mRNA degradation and cellular differentiation (PubMed:28106072, PubMed:32492408). M6A-containing mRNAs containing a binding site for RIDA/HRSP12 (5'-GGUUC-3') are preferentially degraded by endoribonucleolytic cleavage: cooperative binding of RIDA/HRSP12 and YTHDF2 to transcripts leads to recruitment of the ribonuclease P/MRP complex (PubMed:30930054). Other m6A-containing mRNAs undergo deadenylation via direct interaction between YTHDF2 and CNOT1, leading to recruitment of the CCR4-NOT and subsequent deadenylation of m6A-containing mRNAs (PubMed:27558897). Required maternally to regulate oocyte maturation: probably acts by binding to m6A-containing mRNAs, thereby regulating maternal transcript dosage during oocyte maturation, which is essential for the competence of oocytes to sustain early zygotic development (By similarity). Also required during spermatogenesis: regulates spermagonial adhesion by promoting degradation of m6A-containing transcripts coding for matrix metallopeptidases (By similarity). Also involved in hematopoietic stem cells specification by binding to m6A-containing mRNAs, leading to promote their degradation (PubMed:30065315). Also acts as a regulator of neural development by promoting m6A-dependent degradation of neural development-related mRNA targets (By similarity). Inhibits neural specification of induced pluripotent stem cells by binding to methylated neural-specific mRNAs and promoting their degradation, thereby restraining neural differentiation (PubMed:32169943). Regulates circadian regulation of hepatic lipid metabolism: acts by promoting m6A-dependent degradation of PPARA transcripts (PubMed:30428350). Regulates the innate immune response to infection by inhibiting the type I interferon response: acts by binding to m6A-containing IFNB transcripts and promoting their degradation (PubMed:30559377). May also act as a promoter of cap-independent mRNA translation following heat shock stress: upon stress, relocalizes to the nucleus and specifically binds mRNAs with some m6A methylation mark at their 5'-UTR, protecting demethylation of mRNAs by FTO, thereby promoting cap-independent mRNA translation (PubMed:26458103). Regulates mitotic entry by promoting the phase-specific m6A-dependent degradation of WEE1 transcripts (PubMed:32267835). Promotes formation of phase-separated membraneless compartments, such as P-bodies or stress granules, by undergoing liquid-liquid phase separation upon binding to mRNAs containing multiple m6A-modified residues: polymethylated mRNAs act as a multivalent scaffold for the binding of YTHDF proteins, juxtaposing their disordered regions and thereby leading to phase separation (PubMed:31388144, PubMed:31292544, PubMed:32451507, PubMed:31642031). The resulting mRNA-YTHDF complexes then partition into different endogenous phase-separated membraneless compartments, such as P-bodies, stress granules or neuronal RNA granules (PubMed:31292544). May also recognize and bind RNAs modified by C5-methylcytosine (m5C) and act as a regulator of rRNA processing (PubMed:31815440).
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Gene ID 51441
HGNC ID HGNC:31675
Ensembl Gene ID ENSG00000198492
KEGG ID hsa:51441
Chromosomal Location 1p35.3
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00232)
YTH domain-containing family protein 2 (YTHDF2)
Adenosine-to-Inosine editing (A-to-I)
In total 25 m6A sequence/site(s) in this target gene
mod ID: A2ISITE005855 Click to Show/Hide the Full List
mod site chr1:28747907-28747908:+ [1]
Sequence GGCTGAGGCGGGCAGATCACAAGGTCAGGAGATCAAGACCA
Transcript ID List ENST00000542507.5; rmsk_65571; ENST00000373812.8; ENST00000541996.5; ENST00000478283.5
External Link RMBase: RNA-editing_site_3256
mod ID: A2ISITE005856 Click to Show/Hide the Full List
mod site chr1:28747908-28747909:+ [1]
Sequence GCTGAGGCGGGCAGATCACAAGGTCAGGAGATCAAGACCAT
Transcript ID List rmsk_65571; ENST00000541996.5; ENST00000478283.5; ENST00000542507.5; ENST00000373812.8
External Link RMBase: RNA-editing_site_3257
mod ID: A2ISITE005857 Click to Show/Hide the Full List
mod site chr1:28747913-28747914:+ [1]
Sequence GGCGGGCAGATCACAAGGTCAGGAGATCAAGACCATCCTGG
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000478283.5; rmsk_65571; ENST00000541996.5
External Link RMBase: RNA-editing_site_3258
mod ID: A2ISITE005858 Click to Show/Hide the Full List
mod site chr1:28747922-28747923:+ [1]
Sequence ATCACAAGGTCAGGAGATCAAGACCATCCTGGCTAACATGG
Transcript ID List ENST00000542507.5; ENST00000478283.5; ENST00000373812.8; rmsk_65571; ENST00000541996.5
External Link RMBase: RNA-editing_site_3259
mod ID: A2ISITE005859 Click to Show/Hide the Full List
mod site chr1:28747924-28747925:+ [1]
Sequence CACAAGGTCAGGAGATCAAGACCATCCTGGCTAACATGGTG
Transcript ID List ENST00000373812.8; ENST00000542507.5; rmsk_65571; ENST00000541996.5; ENST00000478283.5
External Link RMBase: RNA-editing_site_3260
mod ID: A2ISITE005860 Click to Show/Hide the Full List
mod site chr1:28747963-28747964:+ [1]
Sequence TGAAACCCCGTCTCTATTAAATAAACTACAAAAAATTAGCT
Transcript ID List ENST00000373812.8; ENST00000478283.5; rmsk_65571; ENST00000541996.5; ENST00000542507.5
External Link RMBase: RNA-editing_site_3261
mod ID: A2ISITE005861 Click to Show/Hide the Full List
mod site chr1:28748023-28748024:+ [1]
Sequence TGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGC
Transcript ID List ENST00000542507.5; ENST00000478283.5; rmsk_65571; ENST00000541996.5; ENST00000373812.8
External Link RMBase: RNA-editing_site_3262
mod ID: A2ISITE005862 Click to Show/Hide the Full List
mod site chr1:28748039-28748040:+ [1]
Sequence CGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGGGGCG
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000541996.5; rmsk_65571; ENST00000478283.5
External Link RMBase: RNA-editing_site_3263
mod ID: A2ISITE005863 Click to Show/Hide the Full List
mod site chr1:28748048-28748049:+ [1]
Sequence GAGGCAGGAGAATGGCGTGAACCCAGGGGGCGGAGCTTGCA
Transcript ID List rmsk_65571; ENST00000541996.5; ENST00000542507.5; ENST00000478283.5; ENST00000373812.8
External Link RMBase: RNA-editing_site_3264
mod ID: A2ISITE005864 Click to Show/Hide the Full List
mod site chr1:28748052-28748053:+ [1]
Sequence CAGGAGAATGGCGTGAACCCAGGGGGCGGAGCTTGCAGTGA
Transcript ID List ENST00000541996.5; ENST00000478283.5; rmsk_65571; ENST00000373812.8; ENST00000542507.5
External Link RMBase: RNA-editing_site_3265
mod ID: A2ISITE005865 Click to Show/Hide the Full List
mod site chr1:28748068-28748069:+ [1]
Sequence ACCCAGGGGGCGGAGCTTGCAGTGAGCCAAGATGGCGCCAC
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000478283.5; ENST00000373812.8; rmsk_65571
External Link RMBase: RNA-editing_site_3266
mod ID: A2ISITE005866 Click to Show/Hide the Full List
mod site chr1:28748077-28748078:+ [1]
Sequence GCGGAGCTTGCAGTGAGCCAAGATGGCGCCACTGGACTCCA
Transcript ID List ENST00000478283.5; ENST00000373812.8; rmsk_65571; ENST00000542507.5; ENST00000541996.5
External Link RMBase: RNA-editing_site_3267
mod ID: A2ISITE005867 Click to Show/Hide the Full List
mod site chr1:28750262-28750263:+ [2]
Sequence CCTCCCAAAGTGCTGGGTTTACAGGCATGAGCCACCATGCC
Transcript ID List ENST00000373812.8; ENST00000542507.5; ENST00000478283.5; ENST00000541996.5
External Link RMBase: RNA-editing_site_3268
mod ID: A2ISITE005868 Click to Show/Hide the Full List
mod site chr1:28752317-28752318:+ [3]
Sequence TGTTGTTGTTGTTGTTTTTGAGACGGAGTCTCACTTGTTGC
Transcript ID List ENST00000478283.5; ENST00000541996.5; ENST00000373812.8; ENST00000542507.5
External Link RMBase: RNA-editing_site_3269
mod ID: A2ISITE005869 Click to Show/Hide the Full List
mod site chr1:28752329-28752330:+ [3]
Sequence TGTTTTTGAGACGGAGTCTCACTTGTTGCCCAGGCTGGAGT
Transcript ID List ENST00000542507.5; ENST00000478283.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: RNA-editing_site_3270
mod ID: A2ISITE005870 Click to Show/Hide the Full List
mod site chr1:28752371-28752372:+ [3]
Sequence CAGTGCAGTGGCATGATCTCAACTCACTGTGTCCTCCACCT
Transcript ID List ENST00000541996.5; ENST00000542507.5; ENST00000478283.5; ENST00000373812.8
External Link RMBase: RNA-editing_site_3271
mod ID: A2ISITE005871 Click to Show/Hide the Full List
mod site chr1:28752372-28752373:+ [3]
Sequence AGTGCAGTGGCATGATCTCAACTCACTGTGTCCTCCACCTC
Transcript ID List ENST00000373812.8; ENST00000478283.5; ENST00000542507.5; ENST00000541996.5
External Link RMBase: RNA-editing_site_3272
mod ID: A2ISITE005872 Click to Show/Hide the Full List
mod site chr1:28752412-28752413:+ [3]
Sequence CCCGGGTTCAGGGCTGCCTCAGCCTCCCAAGTAGCTGGGAC
Transcript ID List ENST00000373812.8; ENST00000478283.5; ENST00000542507.5; ENST00000541996.5
External Link RMBase: RNA-editing_site_3273
mod ID: A2ISITE005873 Click to Show/Hide the Full List
mod site chr1:28752436-28752437:+ [3]
Sequence TCCCAAGTAGCTGGGACTACAGGTGCTTGCCACCACTCCCG
Transcript ID List ENST00000373812.8; ENST00000542507.5; ENST00000478283.5; ENST00000541996.5
External Link RMBase: RNA-editing_site_3274
mod ID: A2ISITE005874 Click to Show/Hide the Full List
mod site chr1:28752475-28752476:+ [3]
Sequence CGGCTAATTTTTGTATTTTTAGTAGAAGCGAGGTTTCACCA
Transcript ID List ENST00000541996.5; ENST00000478283.5; ENST00000542507.5; ENST00000373812.8
External Link RMBase: RNA-editing_site_3275
mod ID: A2ISITE005875 Click to Show/Hide the Full List
mod site chr1:28752481-28752482:+ [3]
Sequence ATTTTTGTATTTTTAGTAGAAGCGAGGTTTCACCATATTGG
Transcript ID List ENST00000542507.5; ENST00000478283.5; ENST00000373812.8; ENST00000541996.5
External Link RMBase: RNA-editing_site_3276
mod ID: A2ISITE005876 Click to Show/Hide the Full List
mod site chr1:28752492-28752493:+ [3]
Sequence TTTAGTAGAAGCGAGGTTTCACCATATTGGTCAGGCTGGTC
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000478283.5; ENST00000373812.8
External Link RMBase: RNA-editing_site_3277
mod ID: A2ISITE005877 Click to Show/Hide the Full List
mod site chr1:28752497-28752498:+ [3]
Sequence TAGAAGCGAGGTTTCACCATATTGGTCAGGCTGGTCTCGAA
Transcript ID List ENST00000373812.8; ENST00000542507.5; ENST00000478283.5; ENST00000541996.5
External Link RMBase: RNA-editing_site_3278
mod ID: A2ISITE005878 Click to Show/Hide the Full List
mod site chr1:28752786-28752787:+ [3]
Sequence GCACAGTGGCTCACACCTGTAATCCCAACACTTTGGGAGGC
Transcript ID List ENST00000541996.5; ENST00000478283.5; ENST00000542507.5; rmsk_65584; ENST00000373812.8
External Link RMBase: RNA-editing_site_3279
mod ID: A2ISITE005879 Click to Show/Hide the Full List
mod site chr1:28753583-28753584:+ [2]
Sequence TAAGAGCATGTTAAAAACATAGTCTTGAGAATGCTTATGGT
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000373812.8; ENST00000478283.5
External Link RMBase: RNA-editing_site_3280
N6-methyladenosine (m6A)
In total 89 m6A sequence/site(s) in this target gene
mod ID: M6ASITE011202 Click to Show/Hide the Full List
mod site chr1:28736643-28736644:+ [4]
Sequence CTTTCCAGGTGTTAGTCGAAACCTCGTGGTGCGACCCTGGT
Motif Score 2.185083333
Cell/Tissue List H1B
Seq Type List m6A-seq
Transcript ID List ENST00000474884.5; ENST00000542507.5
External Link RMBase: m6A_site_17997
mod ID: M6ASITE011210 Click to Show/Hide the Full List
mod site chr1:28737020-28737021:+ [5]
Sequence GAGGCCCCCGAGTGTCAGGGACAAAAGCCTCCGCCTGCTCC
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; A549; U2OS; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000478283.5; ENST00000474884.5; ENST00000542507.5; ENST00000373812.8; ENST00000541996.5; ENST00000496288.5
External Link RMBase: m6A_site_17998
mod ID: M6ASITE011221 Click to Show/Hide the Full List
mod site chr1:28737620-28737621:+ [5]
Sequence CTTTTCCATTTCTCCTTTGGACAACTTGCTGCTCGGCGACG
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000478283.5; ENST00000373812.8; ENST00000541996.5; ENST00000542507.5; ENST00000474884.5; ENST00000496288.5
External Link RMBase: m6A_site_17999
mod ID: M6ASITE011232 Click to Show/Hide the Full List
mod site chr1:28738274-28738275:+ [6]
Sequence TTAGTACAAAATGGATCTGTACATCAAAAGGATGGATTAAA
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000476976.1; ENST00000373812.8; ENST00000475796.5; ENST00000474884.5; ENST00000496288.5; ENST00000478283.5; ENST00000542507.5; ENST00000541996.5
External Link RMBase: m6A_site_18000
mod ID: M6ASITE011243 Click to Show/Hide the Full List
mod site chr1:28738310-28738311:+ [5]
Sequence TTAAACGATGATGATTTTGAACCTTACTTGAGTCCACAGGC
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34
Seq Type List m6A-seq
Transcript ID List ENST00000478283.5; ENST00000542507.5; ENST00000496288.5; ENST00000475796.5; ENST00000541996.5; ENST00000373812.8; ENST00000476976.1; ENST00000474884.5
External Link RMBase: m6A_site_18001
mod ID: M6ASITE011244 Click to Show/Hide the Full List
mod site chr1:28738315-28738316:+ [7]
Sequence CGATGATGATTTTGAACCTTACTTGAGTCCACAGGCAAGGC
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000373812.8; ENST00000478283.5; ENST00000474884.5; ENST00000496288.5; ENST00000542507.5; ENST00000476976.1; ENST00000475796.5; ENST00000541996.5
External Link RMBase: m6A_site_18002
mod ID: M6ASITE011245 Click to Show/Hide the Full List
mod site chr1:28742445-28742446:+ [7]
Sequence AGATTCCTACTTACCCAGTTACTACAGTCCCTCCATTGGCT
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000475796.5; ENST00000373812.8; ENST00000468863.1; ENST00000496288.5; ENST00000541996.5; ENST00000478283.5; ENST00000542507.5; ENST00000474884.5; ENST00000476976.1
External Link RMBase: m6A_site_18003
mod ID: M6ASITE011246 Click to Show/Hide the Full List
mod site chr1:28742508-28742509:+ [6]
Sequence TGCTTGGTCTACGGGGGGTGACACAGCCATGCCCTACTTAA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000496288.5; ENST00000542507.5; ENST00000373812.8; ENST00000476976.1; ENST00000475796.5; ENST00000474884.5; ENST00000468863.1; ENST00000478283.5; ENST00000541996.5
External Link RMBase: m6A_site_18004
mod ID: M6ASITE011247 Click to Show/Hide the Full List
mod site chr1:28742539-28742540:+ [8]
Sequence CCCTACTTAACTTCTTATGGACAGCTGAGCAACGGAGAGCC
Motif Score 3.643047619
Cell/Tissue List CD34; HEK293T; hESC-HEK293T; HepG2; HeLa; U2OS; hESCs; fibroblasts; A549; GM12878; HEK293A-TOA; iSLK; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq; miCLIP
Transcript ID List ENST00000373812.8; ENST00000476976.1; ENST00000496288.5; ENST00000474884.5; ENST00000541996.5; ENST00000468863.1; ENST00000542507.5; ENST00000478283.5; ENST00000475796.5
External Link RMBase: m6A_site_18005
mod ID: M6ASITE011248 Click to Show/Hide the Full List
mod site chr1:28742658-28742659:+ [7]
Sequence TTTCTTTCCCAGTGGGATTGACTTCTCAGCATGGGGAAATA
Motif Score 3.28175
Cell/Tissue List HEK293T; A549
Seq Type List DART-seq; m6A-CLIP/IP
Transcript ID List ENST00000476976.1; ENST00000542507.5; ENST00000478283.5; ENST00000468863.1; ENST00000474884.5; ENST00000373812.8; ENST00000496288.5; ENST00000541996.5
External Link RMBase: m6A_site_18006
mod ID: M6ASITE011249 Click to Show/Hide the Full List
mod site chr1:28742692-28742693:+ [5]
Sequence GGAAATAACAGTTCTCAGGGACAGTCTACTCAGAGCTCTGG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HEK293T; A549; hESC-HEK293T; HepG2; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000468863.1; ENST00000474884.5; ENST00000496288.5; ENST00000476976.1; ENST00000541996.5; ENST00000478283.5
External Link RMBase: m6A_site_18007
mod ID: M6ASITE011250 Click to Show/Hide the Full List
mod site chr1:28742699-28742700:+ [7]
Sequence ACAGTTCTCAGGGACAGTCTACTCAGAGCTCTGGATATAGT
Motif Score 2.500660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000468863.1; ENST00000474884.5; ENST00000478283.5; ENST00000542507.5; ENST00000541996.5; ENST00000476976.1; ENST00000496288.5; ENST00000373812.8
External Link RMBase: m6A_site_18008
mod ID: M6ASITE011251 Click to Show/Hide the Full List
mod site chr1:28742770-28742771:+ [5]
Sequence GGTGGAGCCATGATTGATGGACAGTCAGCTTTTGCCAATGA
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000468863.1; ENST00000478283.5; ENST00000474884.5; ENST00000496288.5; ENST00000476976.1; ENST00000542507.5; ENST00000373812.8; ENST00000541996.5
External Link RMBase: m6A_site_18009
mod ID: M6ASITE011253 Click to Show/Hide the Full List
mod site chr1:28742792-28742793:+ [5]
Sequence AGTCAGCTTTTGCCAATGAGACCCTCAATAAGGCTCCTGGC
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000541996.5; ENST00000476976.1; ENST00000478283.5; ENST00000468863.1; ENST00000373812.8; ENST00000474884.5; ENST00000496288.5; ENST00000542507.5
External Link RMBase: m6A_site_18010
mod ID: M6ASITE011254 Click to Show/Hide the Full List
mod site chr1:28742826-28742827:+ [5]
Sequence TCCTGGCATGAATACTATAGACCAAGGGATGGCAGCACTGA
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000476976.1; ENST00000542507.5; ENST00000373812.8; ENST00000478283.5; ENST00000474884.5; ENST00000541996.5; ENST00000468863.1; ENST00000496288.5
External Link RMBase: m6A_site_18011
mod ID: M6ASITE011255 Click to Show/Hide the Full List
mod site chr1:28742842-28742843:+ [7]
Sequence ATAGACCAAGGGATGGCAGCACTGAAGTTGGGTAGCACAGA
Motif Score 3.252583333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000476976.1; ENST00000373812.8; ENST00000496288.5; ENST00000541996.5; ENST00000474884.5; ENST00000478283.5; ENST00000468863.1; ENST00000542507.5
External Link RMBase: m6A_site_18012
mod ID: M6ASITE011256 Click to Show/Hide the Full List
mod site chr1:28742925-28742926:+ [6]
Sequence TAGCGGGTCCATTACTAGTAACATCGTGGCTTCCAATAGTT
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000541996.5; ENST00000373812.8; ENST00000496288.5; ENST00000478283.5; ENST00000542507.5
External Link RMBase: m6A_site_18013
mod ID: M6ASITE011257 Click to Show/Hide the Full List
mod site chr1:28742974-28742975:+ [5]
Sequence GCCACCATTGCTCCTCCAAAACCAGCATCTTGGGCTGATAT
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HEK293T; A549; HepG2; U2OS; fibroblasts; GM12878; H1299; Huh7; HEK293A-TOA; iSLK; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000496288.5; ENST00000478283.5; ENST00000541996.5; ENST00000542507.5; ENST00000373812.8
External Link RMBase: m6A_site_18014
mod ID: M6ASITE011258 Click to Show/Hide the Full List
mod site chr1:28743013-28743014:+ [5]
Sequence ATTGCTAGCAAGCCTGCAAAACAGCAACCTAAACTGAAGAC
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; HEK293T; A549; HepG2; U2OS; hNPCs; hESCs; fibroblasts; GM12878; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000541996.5; ENST00000542507.5; ENST00000478283.5; ENST00000373812.8
External Link RMBase: m6A_site_18015
mod ID: M6ASITE011265 Click to Show/Hide the Full List
mod site chr1:28743025-28743026:+ [5]
Sequence CCTGCAAAACAGCAACCTAAACTGAAGACCAAGAATGGCAT
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HEK293T; A549; HepG2; U2OS; hNPCs; hESCs; fibroblasts; GM12878; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000478283.5; ENST00000542507.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: m6A_site_18016
mod ID: M6ASITE011274 Click to Show/Hide the Full List
mod site chr1:28743032-28743033:+ [5]
Sequence AACAGCAACCTAAACTGAAGACCAAGAATGGCATTGCAGGG
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HEK293T; A549; HepG2; U2OS; hNPCs; hESCs; fibroblasts; GM12878; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000541996.5; ENST00000373812.8; ENST00000542507.5; ENST00000478283.5
External Link RMBase: m6A_site_18017
mod ID: M6ASITE011285 Click to Show/Hide the Full List
mod site chr1:28743084-28743085:+ [6]
Sequence GCCACCCCCGATAAAGCATAACATGGATATTGGAACTTGGG
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000478283.5; ENST00000373812.8
External Link RMBase: m6A_site_18018
mod ID: M6ASITE011294 Click to Show/Hide the Full List
mod site chr1:28743098-28743099:+ [5]
Sequence AGCATAACATGGATATTGGAACTTGGGATAACAAGGGTCCC
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; HEK293T; A549; HepG2; U2OS; hNPCs; hESCs; fibroblasts; GM12878; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000478283.5; ENST00000373812.8; ENST00000542507.5; ENST00000541996.5
External Link RMBase: m6A_site_18019
mod ID: M6ASITE011296 Click to Show/Hide the Full List
mod site chr1:28743108-28743109:+ [7]
Sequence GGATATTGGAACTTGGGATAACAAGGGTCCCGTTGCAAAAG
Motif Score 2.168095238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000478283.5; ENST00000542507.5; ENST00000373812.8; ENST00000541996.5
External Link RMBase: m6A_site_18020
mod ID: M6ASITE011297 Click to Show/Hide the Full List
mod site chr1:28743204-28743205:+ [6]
Sequence GCCTGTAGGTCAGCAGGCTAACAATAGCCCACCAGTGGCTC
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000478283.5; ENST00000541996.5
External Link RMBase: m6A_site_18021
mod ID: M6ASITE011298 Click to Show/Hide the Full List
mod site chr1:28743214-28743215:+ [7]
Sequence CAGCAGGCTAACAATAGCCCACCAGTGGCTCAGGCATCAGT
Motif Score 2.032470238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000478283.5; ENST00000373812.8; ENST00000541996.5; ENST00000542507.5
External Link RMBase: m6A_site_18022
mod ID: M6ASITE011299 Click to Show/Hide the Full List
mod site chr1:28743245-28743246:+ [5]
Sequence AGGCATCAGTAGGGCAACAGACACAGCCATTGCCTCCACCT
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HEK293T; A549; HepG2; U2OS; hESCs; fibroblasts; GM12878; H1299; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000541996.5; ENST00000373812.8; ENST00000478283.5; ENST00000542507.5
External Link RMBase: m6A_site_18023
mod ID: M6ASITE011300 Click to Show/Hide the Full List
mod site chr1:28743336-28743337:+ [5]
Sequence CCGCTGGGTAGCACCTCGGAACCGTGGCAGTGGGTTCGGTC
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000478283.5; ENST00000541996.5
External Link RMBase: m6A_site_18024
mod ID: M6ASITE011301 Click to Show/Hide the Full List
mod site chr1:28743385-28743386:+ [5]
Sequence GTGGATGGTAATGGAGTAGGACAGTCTCAGGCTGGTTCTGG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000541996.5; ENST00000373812.8; ENST00000542507.5; ENST00000478283.5
External Link RMBase: m6A_site_18025
mod ID: M6ASITE011302 Click to Show/Hide the Full List
mod site chr1:28743410-28743411:+ [7]
Sequence CTCAGGCTGGTTCTGGATCTACTCCTTCAGAACCCCACCCA
Motif Score 2.500660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000478283.5; ENST00000373812.8; ENST00000541996.5
External Link RMBase: m6A_site_18026
mod ID: M6ASITE011303 Click to Show/Hide the Full List
mod site chr1:28743421-28743422:+ [5]
Sequence TCTGGATCTACTCCTTCAGAACCCCACCCAGTGTTGGAGAA
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000478283.5; ENST00000541996.5; ENST00000373812.8; ENST00000542507.5
External Link RMBase: m6A_site_18027
mod ID: M6ASITE011304 Click to Show/Hide the Full List
mod site chr1:28743459-28743460:+ [9]
Sequence GAAGCTTCGGTCCATTAATAACTATAACCCCAAAGATTTTG
Motif Score 2.590089286
Cell/Tissue List CD8T; A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000373812.8; ENST00000541996.5; ENST00000478283.5; ENST00000542507.5
External Link RMBase: m6A_site_18028
mod ID: M6ASITE011305 Click to Show/Hide the Full List
mod site chr1:28743465-28743466:+ [9]
Sequence TCGGTCCATTAATAACTATAACCCCAAAGATTTTGACTGGA
Motif Score 2.147452381
Cell/Tissue List CD8T; A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000373812.8; ENST00000478283.5; ENST00000541996.5; ENST00000542507.5
External Link RMBase: m6A_site_18029
mod ID: M6ASITE011307 Click to Show/Hide the Full List
mod site chr1:28743480-28743481:+ [7]
Sequence CTATAACCCCAAAGATTTTGACTGGAATCTGAAACATGGCC
Motif Score 3.28175
Cell/Tissue List HEK293T; AML
Seq Type List DART-seq; miCLIP
Transcript ID List ENST00000541996.5; ENST00000373812.8; ENST00000478283.5; ENST00000542507.5
External Link RMBase: m6A_site_18030
mod ID: M6ASITE011308 Click to Show/Hide the Full List
mod site chr1:28743493-28743494:+ [5]
Sequence GATTTTGACTGGAATCTGAAACATGGCCGGGTTTTCATCAT
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; DART-seq; MAZTER-seq
Transcript ID List ENST00000541996.5; ENST00000373812.8; ENST00000542507.5; ENST00000478283.5
External Link RMBase: m6A_site_18031
mod ID: M6ASITE011309 Click to Show/Hide the Full List
mod site chr1:28743522-28743523:+ [7]
Sequence GGTTTTCATCATTAAGAGCTACTCTGAGGACGATATTCACC
Motif Score 2.500660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000478283.5; ENST00000541996.5; ENST00000373812.8; ENST00000542507.5
External Link RMBase: m6A_site_18032
mod ID: M6ASITE011310 Click to Show/Hide the Full List
mod site chr1:28743540-28743541:+ [7]
Sequence CTACTCTGAGGACGATATTCACCGTTCCATTAAGTATAATA
Motif Score 2.026654762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000478283.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: m6A_site_18033
mod ID: M6ASITE011311 Click to Show/Hide the Full List
mod site chr1:28743585-28743586:+ [7]
Sequence GTGCAGCACAGAGCATGGTAACAAGAGACTGGATGCTGCTT
Motif Score 2.168095238
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000373812.8; ENST00000478283.5; ENST00000542507.5; ENST00000541996.5
External Link RMBase: m6A_site_18034
mod ID: M6ASITE011312 Click to Show/Hide the Full List
mod site chr1:28743592-28743593:+ [5]
Sequence ACAGAGCATGGTAACAAGAGACTGGATGCTGCTTATCGTTC
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000478283.5; ENST00000373812.8; ENST00000541996.5; ENST00000542507.5
External Link RMBase: m6A_site_18035
mod ID: M6ASITE011313 Click to Show/Hide the Full List
mod site chr1:28743618-28743619:+ [7]
Sequence TGCTGCTTATCGTTCCATGAACGGGAAAGGCCCCGTTTACT
Motif Score 2.925321429
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000478283.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: m6A_site_18036
mod ID: M6ASITE011314 Click to Show/Hide the Full List
mod site chr1:28743636-28743637:+ [7]
Sequence GAACGGGAAAGGCCCCGTTTACTTACTTTTCAGTGTCAACG
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000373812.8; ENST00000478283.5; ENST00000542507.5; ENST00000541996.5
External Link RMBase: m6A_site_18037
mod ID: M6ASITE011315 Click to Show/Hide the Full List
mod site chr1:28743654-28743655:+ [7]
Sequence TTACTTACTTTTCAGTGTCAACGGCAGTGGACACTTCTGTG
Motif Score 2.147845238
Cell/Tissue List HEK293T; A549
Seq Type List DART-seq; m6A-CLIP/IP
Transcript ID List ENST00000542507.5; ENST00000478283.5; ENST00000373812.8; ENST00000541996.5
External Link RMBase: m6A_site_18038
mod ID: M6ASITE011316 Click to Show/Hide the Full List
mod site chr1:28743664-28743665:+ [5]
Sequence TTCAGTGTCAACGGCAGTGGACACTTCTGTGGCGTGGCAGA
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; brain; kidney; A549; hESC-HEK293T; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000478283.5; ENST00000541996.5; ENST00000542507.5; ENST00000373812.8
External Link RMBase: m6A_site_18039
mod ID: M6ASITE011318 Click to Show/Hide the Full List
mod site chr1:28743702-28743703:+ [5]
Sequence AGAAATGAAATCTGCTGTGGACTACAACACATGTGCAGGTG
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000478283.5; ENST00000373812.8; ENST00000541996.5; ENST00000542507.5
External Link RMBase: m6A_site_18040
mod ID: M6ASITE011319 Click to Show/Hide the Full List
mod site chr1:28743705-28743706:+ [6]
Sequence AATGAAATCTGCTGTGGACTACAACACATGTGCAGGTGTGT
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000478283.5; ENST00000541996.5
External Link RMBase: m6A_site_18041
mod ID: M6ASITE011320 Click to Show/Hide the Full List
mod site chr1:28743735-28743736:+ [5]
Sequence TGCAGGTGTGTGGTCCCAGGACAAATGGAAGGGTCGTTTTG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; brain; liver; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000373812.8; ENST00000541996.5; ENST00000478283.5; ENST00000542507.5
External Link RMBase: m6A_site_18043
mod ID: M6ASITE011321 Click to Show/Hide the Full List
mod site chr1:28743796-28743797:+ [7]
Sequence AAGGACGTTCCCAATAGCCAACTGCGACACATTCGCCTAGA
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000541996.5; ENST00000478283.5; ENST00000373812.8; ENST00000542507.5
External Link RMBase: m6A_site_18044
mod ID: M6ASITE011322 Click to Show/Hide the Full List
mod site chr1:28743802-28743803:+ [7]
Sequence GTTCCCAATAGCCAACTGCGACACATTCGCCTAGAGAACAA
Motif Score 2.865571429
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000541996.5; ENST00000478283.5
External Link RMBase: m6A_site_18045
mod ID: M6ASITE011323 Click to Show/Hide the Full List
mod site chr1:28743804-28743805:+ [7]
Sequence TCCCAATAGCCAACTGCGACACATTCGCCTAGAGAACAACG
Motif Score 2.084928571
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000478283.5; ENST00000373812.8; ENST00000541996.5; ENST00000542507.5
External Link RMBase: m6A_site_18046
mod ID: M6ASITE011324 Click to Show/Hide the Full List
mod site chr1:28743819-28743820:+ [5]
Sequence GCGACACATTCGCCTAGAGAACAACGAGAATAAACCAGTGA
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000478283.5; ENST00000542507.5; ENST00000373812.8; ENST00000541996.5
External Link RMBase: m6A_site_18047
mod ID: M6ASITE011325 Click to Show/Hide the Full List
mod site chr1:28743832-28743833:+ [5]
Sequence CTAGAGAACAACGAGAATAAACCAGTGACCAACTCTAGGGA
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000542507.5; ENST00000478283.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: m6A_site_18048
mod ID: M6ASITE011326 Click to Show/Hide the Full List
mod site chr1:28743839-28743840:+ [7]
Sequence ACAACGAGAATAAACCAGTGACCAACTCTAGGGACACTCAG
Motif Score 2.839113095
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000478283.5; ENST00000373812.8; ENST00000542507.5; ENST00000541996.5
External Link RMBase: m6A_site_18049
mod ID: M6ASITE011328 Click to Show/Hide the Full List
mod site chr1:28743843-28743844:+ [7]
Sequence CGAGAATAAACCAGTGACCAACTCTAGGGACACTCAGGAAG
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000478283.5; ENST00000541996.5; ENST00000373812.8; ENST00000542507.5
External Link RMBase: m6A_site_18050
mod ID: M6ASITE011329 Click to Show/Hide the Full List
mod site chr1:28743852-28743853:+ [5]
Sequence ACCAGTGACCAACTCTAGGGACACTCAGGAAGTGCCTCTGG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000541996.5; ENST00000542507.5; ENST00000373812.8; ENST00000478283.5
External Link RMBase: m6A_site_18051
mod ID: M6ASITE011330 Click to Show/Hide the Full List
mod site chr1:28743909-28743910:+ [6]
Sequence GTTGAAAATTATAGCCAGCTACAAGCACACCACTTCCATTT
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000542507.5; ENST00000478283.5; ENST00000373812.8; ENST00000541996.5
External Link RMBase: m6A_site_18052
mod ID: M6ASITE011331 Click to Show/Hide the Full List
mod site chr1:28743920-28743921:+ [7]
Sequence TAGCCAGCTACAAGCACACCACTTCCATTTTTGATGACTTC
Motif Score 2.475107143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000373812.8; ENST00000478283.5; ENST00000542507.5; ENST00000541996.5
External Link RMBase: m6A_site_18053
mod ID: M6ASITE011332 Click to Show/Hide the Full List
mod site chr1:28743936-28743937:+ [7]
Sequence CACCACTTCCATTTTTGATGACTTCTCACACTATGAGAAAC
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000541996.5; ENST00000478283.5
External Link RMBase: m6A_site_18054
mod ID: M6ASITE011333 Click to Show/Hide the Full List
mod site chr1:28743943-28743944:+ [7]
Sequence TCCATTTTTGATGACTTCTCACACTATGAGAAACGCCAAGA
Motif Score 2.047297619
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000541996.5; ENST00000478283.5; ENST00000373812.8; ENST00000542507.5
External Link RMBase: m6A_site_18055
mod ID: M6ASITE011334 Click to Show/Hide the Full List
mod site chr1:28743945-28743946:+ [7]
Sequence CATTTTTGATGACTTCTCACACTATGAGAAACGCCAAGAGG
Motif Score 2.506922619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000541996.5; ENST00000373812.8; ENST00000542507.5; ENST00000478283.5
External Link RMBase: m6A_site_18056
mod ID: M6ASITE011335 Click to Show/Hide the Full List
mod site chr1:28743955-28743956:+ [7]
Sequence GACTTCTCACACTATGAGAAACGCCAAGAGGAAGAAGAAAG
Motif Score 2.179660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000373812.8; ENST00000478283.5
External Link RMBase: m6A_site_18057
mod ID: M6ASITE011336 Click to Show/Hide the Full List
mod site chr1:28768963-28768964:+ [7]
Sequence GGGAAATAAAAGGCAGTTCTACACAGACTGCAGCAACGGTT
Motif Score 2.078666667
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000542507.5; ENST00000478283.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: m6A_site_18058
mod ID: M6ASITE011337 Click to Show/Hide the Full List
mod site chr1:28768969-28768970:+ [5]
Sequence TAAAAGGCAGTTCTACACAGACTGCAGCAACGGTTGCATCT
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HEK293T; A549; HepG2; hNPCs; hESCs; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000478283.5; ENST00000541996.5; ENST00000373812.8; ENST00000542507.5
External Link RMBase: m6A_site_18059
mod ID: M6ASITE011339 Click to Show/Hide the Full List
mod site chr1:28769031-28769032:+ [5]
Sequence TGACCTTCAAGAGAATTAGGACTTTTTTCTTAATTTCACTG
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; hNPCs; hESCs; fibroblasts; A549; GM12878; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000373812.8; ENST00000541996.5; ENST00000542507.5; ENST00000478283.5
External Link RMBase: m6A_site_18060
mod ID: M6ASITE011340 Click to Show/Hide the Full List
mod site chr1:28769048-28769049:+ [7]
Sequence AGGACTTTTTTCTTAATTTCACTGACTTCAGAGACGATTGC
Motif Score 2.469291667
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000541996.5; ENST00000542507.5; ENST00000478283.5; ENST00000373812.8
External Link RMBase: m6A_site_18061
mod ID: M6ASITE011341 Click to Show/Hide the Full List
mod site chr1:28769052-28769053:+ [7]
Sequence CTTTTTTCTTAATTTCACTGACTTCAGAGACGATTGCAGAC
Motif Score 3.28175
Cell/Tissue List HEK293T; A549
Seq Type List DART-seq; m6A-CLIP/IP
Transcript ID List ENST00000478283.5; ENST00000542507.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: m6A_site_18062
mod ID: M6ASITE011342 Click to Show/Hide the Full List
mod site chr1:28769061-28769062:+ [7]
Sequence TAATTTCACTGACTTCAGAGACGATTGCAGACTTGCAGTTT
Motif Score 2.871321429
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000373812.8; ENST00000478283.5
External Link RMBase: m6A_site_18063
mod ID: M6ASITE011343 Click to Show/Hide the Full List
mod site chr1:28769071-28769072:+ [5]
Sequence GACTTCAGAGACGATTGCAGACTTGCAGTTTAAGTATTGGA
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; hNPCs; hESCs; fibroblasts; A549; GM12878; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; DART-seq; miCLIP
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000478283.5; ENST00000373812.8
External Link RMBase: m6A_site_18064
mod ID: M6ASITE011344 Click to Show/Hide the Full List
mod site chr1:28769097-28769098:+ [6]
Sequence AGTTTAAGTATTGGAATTTCACAAAAGACATAGGACTTAAC
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000373812.8; ENST00000541996.5; ENST00000478283.5; ENST00000542507.5
External Link RMBase: m6A_site_18065
mod ID: M6ASITE011345 Click to Show/Hide the Full List
mod site chr1:28769104-28769105:+ [5]
Sequence GTATTGGAATTTCACAAAAGACATAGGACTTAACTGGAAAA
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; hESC-HEK293T; hNPCs; hESCs; fibroblasts; A549; GM12878; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq; MAZTER-seq
Transcript ID List ENST00000478283.5; ENST00000541996.5; ENST00000542507.5; ENST00000373812.8
External Link RMBase: m6A_site_18066
mod ID: M6ASITE011346 Click to Show/Hide the Full List
mod site chr1:28769111-28769112:+ [5]
Sequence AATTTCACAAAAGACATAGGACTTAACTGGAAAATGAAAAA
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; hNPCs; hESCs; fibroblasts; A549; GM12878; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000478283.5; ENST00000373812.8
External Link RMBase: m6A_site_18067
mod ID: M6ASITE011347 Click to Show/Hide the Full List
mod site chr1:28769116-28769117:+ [7]
Sequence CACAAAAGACATAGGACTTAACTGGAAAATGAAAAAAAAAA
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000478283.5; ENST00000373812.8
External Link RMBase: m6A_site_18068
mod ID: M6ASITE011348 Click to Show/Hide the Full List
mod site chr1:28769149-28769150:+ [5]
Sequence AAAAAAAAGAAAAAGAAAAAACTAAACAAAAAATCCCTCTA
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; HEK293T; hNPCs; hESCs; fibroblasts; A549; GM12878; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000542507.5; ENST00000373812.8; rmsk_65636; ENST00000541996.5
External Link RMBase: m6A_site_18069
mod ID: M6ASITE011350 Click to Show/Hide the Full List
mod site chr1:28769154-28769155:+ [5]
Sequence AAAGAAAAAGAAAAAACTAAACAAAAAATCCCTCTAGGTAG
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; hESC-HEK293T; H1B; hNPCs; hESCs; fibroblasts; A549; GM12878; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq; MAZTER-seq
Transcript ID List ENST00000541996.5; ENST00000542507.5; ENST00000373812.8; rmsk_65636
External Link RMBase: m6A_site_18070
mod ID: M6ASITE011351 Click to Show/Hide the Full List
mod site chr1:28769252-28769253:+ [7]
Sequence CTATGTTTTTTTGTCTTTTTACTATGTTTTTCGGATTTTTA
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000541996.5
External Link RMBase: m6A_site_18071
mod ID: M6ASITE011352 Click to Show/Hide the Full List
mod site chr1:28769288-28769289:+ [7]
Sequence TTTTAAGTCCGTAAGTGCATACAGTTTTCTCTAATTTTTAA
Motif Score 2.110482143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: m6A_site_18072
mod ID: M6ASITE011353 Click to Show/Hide the Full List
mod site chr1:28769309-28769310:+ [10]
Sequence CAGTTTTCTCTAATTTTTAAACCCTTTCCTCCTCCCATTTT
Motif Score 2.185083333
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000541996.5; ENST00000542507.5; ENST00000373812.8
External Link RMBase: m6A_site_18073
mod ID: M6ASITE011354 Click to Show/Hide the Full List
mod site chr1:28769331-28769332:+ [6]
Sequence CCTTTCCTCCTCCCATTTTGACATTTGCACTTGGAGAACAC
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000541996.5
External Link RMBase: m6A_site_18074
mod ID: M6ASITE011355 Click to Show/Hide the Full List
mod site chr1:28769348-28769349:+ [6]
Sequence TTGACATTTGCACTTGGAGAACACTTGAGTTGTGAAGGTTT
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T; Huh7
Seq Type List MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: m6A_site_18075
mod ID: M6ASITE011356 Click to Show/Hide the Full List
mod site chr1:28769423-28769424:+ [6]
Sequence TATCCTTCCGAACTGGAAGAACATTTTTATGAAGAATTTTT
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000541996.5; ENST00000373812.8; ENST00000542507.5
External Link RMBase: m6A_site_18076
mod ID: M6ASITE011357 Click to Show/Hide the Full List
mod site chr1:28769459-28769460:+ [7]
Sequence TTTTTGTCTAGGAGAATATAACAGTGTTACCCAAGGTTGTG
Motif Score 2.168095238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000541996.5
External Link RMBase: m6A_site_18077
mod ID: M6ASITE011358 Click to Show/Hide the Full List
mod site chr1:28769467-28769468:+ [7]
Sequence TAGGAGAATATAACAGTGTTACCCAAGGTTGTGTCTTTAAG
Motif Score 2.052208333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000541996.5; ENST00000373812.8; ENST00000542507.5
External Link RMBase: m6A_site_18078
mod ID: M6ASITE011359 Click to Show/Hide the Full List
mod site chr1:28769516-28769517:+ [7]
Sequence ATTTTCTCTGACCTTTTGTTACTCAAAGTAAAGTACTAGGA
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: m6A_site_18079
mod ID: M6ASITE011361 Click to Show/Hide the Full List
mod site chr1:28769530-28769531:+ [7]
Sequence TTTGTTACTCAAAGTAAAGTACTAGGAGTCCTAAGAAATGT
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000541996.5; ENST00000373812.8; ENST00000542507.5
External Link RMBase: m6A_site_18080
mod ID: M6ASITE011362 Click to Show/Hide the Full List
mod site chr1:28769562-28769563:+ [7]
Sequence AAGAAATGTTCTGTTCTTGTACATTATACTGATTAAGTCAG
Motif Score 2.856142857
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000541996.5; ENST00000542507.5; ENST00000373812.8
External Link RMBase: m6A_site_18081
mod ID: M6ASITE011363 Click to Show/Hide the Full List
mod site chr1:28769569-28769570:+ [7]
Sequence GTTCTGTTCTTGTACATTATACTGATTAAGTCAGGATTAAT
Motif Score 2.53247619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000542507.5; ENST00000373812.8; ENST00000541996.5
External Link RMBase: m6A_site_18082
mod ID: M6ASITE011364 Click to Show/Hide the Full List
mod site chr1:28769608-28769609:+ [5]
Sequence ATTTGATTTCAAAGCTGAGAACAGTGGTAAAAACTCGTTTA
Motif Score 2.951386905
Cell/Tissue List HeLa; liver
Seq Type List m6A-seq; m6A-REF-seq
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: m6A_site_18083
mod ID: M6ASITE011365 Click to Show/Hide the Full List
mod site chr1:28769620-28769621:+ [5]
Sequence AGCTGAGAACAGTGGTAAAAACTCGTTTACAGAAATGCATT
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000373812.8; ENST00000542507.5; ENST00000541996.5
External Link RMBase: m6A_site_18084
mod ID: M6ASITE011366 Click to Show/Hide the Full List
mod site chr1:28769628-28769629:+ [11]
Sequence ACAGTGGTAAAAACTCGTTTACAGAAATGCATTTTGGAAGA
Motif Score 2.07285119
Cell/Tissue List brain; HEK293T
Seq Type List m6A-REF-seq; DART-seq
Transcript ID List ENST00000542507.5; ENST00000541996.5; ENST00000373812.8
External Link RMBase: m6A_site_18085
mod ID: M6ASITE011367 Click to Show/Hide the Full List
mod site chr1:28769664-28769665:+ [7]
Sequence GAAGAGAAAAATACTGTAAAACGTGTCGTGAATGTTTCTTC
Motif Score 2.179660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000373812.8; ENST00000541996.5; ENST00000542507.5
External Link RMBase: m6A_site_18086
Pseudouridine (Pseudo)
In total 1 m6A sequence/site(s) in this target gene
mod ID: PSESITE000006 Click to Show/Hide the Full List
mod site chr1:28738290-28738291:+ [12]
Sequence CTGTACATCAAAAGGATGGATTAAACGATGATGATTTTGAA
Transcript ID List ENST00000474884.5; ENST00000541996.5; ENST00000476976.1; ENST00000373812.8; ENST00000496288.5; ENST00000542507.5; ENST00000478283.5; ENST00000475796.5
External Link RMBase: Pseudo_site_105