Epigenetic Target Information
General Information of the Epigenetic Target (ID: EPITAR00176)
| Target Name | Long Terminal Repeat 7 (LTR7) |
|---|---|
| Gene Name | LTR7 |
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00176)
| In total 2 m6A sequence/site(s) in this target gene | |||
| mod ID: AC4SITE000077 | Click to Show/Hide the Full List | ||
| mod site | chr3:176322012-176322013:- | [1] | |
| Sequence | TCCTGTGACTTGCAGGTATACGCCCAGATGGCCTGAACTAA | ||
| Cell/Tissue List | H1 | ||
| Seq Type List | ac4C-seq | ||
| Transcript ID List | rmsk_1174006 | ||
| External Link | RMBase: ac4C_site_1423 | ||
| mod ID: AC4SITE000130 | Click to Show/Hide the Full List | ||
| mod site | chr8:114287724-114287725:+ | [1] | |
| Sequence | TGCTGGTCTCTTCACAGATACGCGCATGAAAGGAAGATTAA | ||
| Cell/Tissue List | H1 | ||
| Seq Type List | ac4C-seq | ||
| Transcript ID List | ENST00000520543.1; rmsk_2620211; ENST00000507929.2; ENST00000521523.5; ENST00000519248.1; ENST00000523682.1 | ||
| External Link | RMBase: ac4C_site_1735 | ||
Adenosine-to-Inosine editing (A-to-I)
| In total 3 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE004292 | Click to Show/Hide the Full List | ||
| mod site | chr10:70626384-70626385:+ | [2] | |
| Sequence | CATCTTCTATGTATTGATTTATGTCTTTGCTTGTAACTTCT | ||
| Transcript ID List | rmsk_3339201 | ||
| External Link | RMBase: RNA-editing_site_16440 | ||
| mod ID: A2ISITE000227 | Click to Show/Hide the Full List | ||
| mod site | chr3:190144612-190144613:+ | [2] | |
| Sequence | TGTCTCCTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATA | ||
| Transcript ID List | ENST00000412203.1; rmsk_1201310 | ||
| External Link | RMBase: RNA-editing_site_101852 | ||
| mod ID: A2ISITE001990 | Click to Show/Hide the Full List | ||
| mod site | chr7:32832584-32832585:+ | [2] | |
| Sequence | AGGCCTCTGAGCCCAAGCTAAGCCATCACATCCCCTGTGAC | ||
| Transcript ID List | rmsk_2199643; ENST00000426647.2 | ||
| External Link | RMBase: RNA-editing_site_121721 | ||
N6-methyladenosine (m6A)
| In total 41 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE031809 | Click to Show/Hide the Full List | ||
| mod site | chr1:70367634-70367635:+ | [3] | |
| Sequence | AGCTTAGTGATGTGTGTCAGACCTCTGAGCCCAAGCAAAGC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | rmsk_159046; ENST00000370940.6; ENST00000531950.1; ENST00000525653.1; ENST00000361764.8; ENST00000463058.5; ENST00000359875.9 | ||
| External Link | RMBase: m6A_site_35839 | ||
| mod ID: M6ASITE031810 | Click to Show/Hide the Full List | ||
| mod site | chr1:70367683-70367684:+ | [4] | |
| Sequence | CCCCTGTGACCTGCATGTATACATCCAGATGGCCTGAAGCA | ||
| Motif Score | 2.110482143 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000359875.9; ENST00000361764.8; ENST00000370940.6; ENST00000531950.1; ENST00000463058.5; rmsk_159046; ENST00000525653.1 | ||
| External Link | RMBase: m6A_site_35840 | ||
| mod ID: M6ASITE031811 | Click to Show/Hide the Full List | ||
| mod site | chr1:70367715-70367716:+ | [4] | |
| Sequence | CCTGAAGCAAGTGAAGAATCACAAAAGAAGTGAAAAGGGCC | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000370940.6; ENST00000361764.8; ENST00000531950.1; ENST00000359875.9; ENST00000525653.1; rmsk_159046; ENST00000463058.5 | ||
| External Link | RMBase: m6A_site_35841 | ||
| mod ID: M6ASITE031812 | Click to Show/Hide the Full List | ||
| mod site | chr1:70367756-70367757:+ | [4] | |
| Sequence | GGTTCCTGCCTTAACTGATGACATTCCACCATTGTGATTTG | ||
| Motif Score | 2.859755952 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000531950.1; rmsk_159046; ENST00000361764.8; ENST00000370940.6; ENST00000359875.9; ENST00000463058.5 | ||
| External Link | RMBase: m6A_site_35842 | ||
| mod ID: M6ASITE031813 | Click to Show/Hide the Full List | ||
| mod site | chr1:70367793-70367794:+ | [5] | |
| Sequence | TTTGTTCCTGCCCCACCTTAACTGAGCGATTAACCTGTGAA | ||
| Motif Score | 2.590089286 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | rmsk_159046; ENST00000370940.6; ENST00000463058.5; ENST00000531950.1; ENST00000361764.8; ENST00000359875.9 | ||
| External Link | RMBase: m6A_site_35843 | ||
| mod ID: M6ASITE031814 | Click to Show/Hide the Full List | ||
| mod site | chr1:70367813-70367814:+ | [3] | |
| Sequence | ACTGAGCGATTAACCTGTGAACTTCCTTCTCCTGGCTCAGA | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HEK293T; hESCs; fibroblasts; A549; MM6; Huh7; HEK293A-TOA | ||
| Seq Type List | m6A-seq; MeRIP-seq; DART-seq | ||
| Transcript ID List | ENST00000359875.9; ENST00000370940.6; ENST00000463058.5; rmsk_159046; ENST00000361764.8; ENST00000531950.1 | ||
| External Link | RMBase: m6A_site_35844 | ||
| mod ID: M6ASITE031815 | Click to Show/Hide the Full List | ||
| mod site | chr1:70367882-70367883:+ | [3] | |
| Sequence | CCGCCCCTGCCTGCCATAGAACAACCCCCTTTGATTGTAAT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HEK293T; hESC-HEK293T; fibroblasts; A549; LCLs; Huh7; HEK293A-TOA; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq; DART-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000359875.9; ENST00000463058.5; ENST00000361764.8; rmsk_159046; ENST00000370940.6; ENST00000531950.1 | ||
| External Link | RMBase: m6A_site_35845 | ||
| mod ID: M6ASITE031816 | Click to Show/Hide the Full List | ||
| mod site | chr1:70367959-70367960:+ | [5] | |
| Sequence | ACCCCTATCTCCCTTCGCTGACACTCTCTTTGGACTCAGCC | ||
| Motif Score | 2.859755952 | ||
| Cell/Tissue List | HEK293T; hESC-HEK293T | ||
| Seq Type List | DART-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000370940.6; ENST00000463058.5; rmsk_159046; ENST00000531950.1; ENST00000359875.9 | ||
| External Link | RMBase: m6A_site_35846 | ||
| mod ID: M6ASITE031817 | Click to Show/Hide the Full List | ||
| mod site | chr1:70367972-70367973:+ | [3] | |
| Sequence | TTCGCTGACACTCTCTTTGGACTCAGCCTGCCTGCACCTAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HEK293T; LCLs; Huh7; HEK293A-TOA; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000463058.5; ENST00000359875.9; ENST00000370940.6; rmsk_159046; ENST00000531950.1 | ||
| External Link | RMBase: m6A_site_35847 | ||
| mod ID: M6ASITE036255 | Click to Show/Hide the Full List | ||
| mod site | chr1:89181193-89181194:- | [6] | |
| Sequence | TTCACTGACTGTCTTTTCGGACTCAGCCAGCCTGCACCCAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | GM12878 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000355754.7; rmsk_190656 | ||
| External Link | RMBase: m6A_site_38992 | ||
| mod ID: M6ASITE036256 | Click to Show/Hide the Full List | ||
| mod site | chr1:89181283-89181284:- | [6] | |
| Sequence | CCACCTCTGCCCGCCAGAGAACAACCCCCTTTGACTGTAAT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | GM12878; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000355754.7; rmsk_190656 | ||
| External Link | RMBase: m6A_site_38993 | ||
| mod ID: M6ASITE042526 | Click to Show/Hide the Full List | ||
| mod site | chr1:112820221-112820222:- | [7] | |
| Sequence | CATTCACTGACTCTTTTTGGACTCAGCCCACCTGCACCCAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | hESCs | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | rmsk_232315; ENST00000433505.5; ENST00000401018.5 | ||
| External Link | RMBase: m6A_site_45723 | ||
| mod ID: M6ASITE042527 | Click to Show/Hide the Full List | ||
| mod site | chr1:112820309-112820310:- | [4] | |
| Sequence | CCACTCCTGCCTAACAGAGAACAATCCCCTTTGACTGTAAT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | hESC-HEK293T; hESCs | ||
| Seq Type List | MAZTER-seq; m6A-seq | ||
| Transcript ID List | ENST00000433505.5; rmsk_232315; ENST00000449572.2; ENST00000401018.5 | ||
| External Link | RMBase: m6A_site_45724 | ||
| mod ID: M6ASITE042528 | Click to Show/Hide the Full List | ||
| mod site | chr1:112820443-112820444:- | [4] | |
| Sequence | CCTGAAGTAACTGAAGAATCACAAAAGAAGTGAAAATGGCG | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000433505.5; ENST00000401018.5; ENST00000449572.2; rmsk_232315 | ||
| External Link | RMBase: m6A_site_45725 | ||
| mod ID: M6ASITE043502 | Click to Show/Hide the Full List | ||
| mod site | chr1:114032394-114032395:+ | [8] | |
| Sequence | TTCACTGACTCTCTTTTTGGACTTAGCCCACCTGCACCCAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | H1B; H1A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000632517.1; rmsk_234873; ENST00000633022.1 | ||
| External Link | RMBase: m6A_site_46408 | ||
| mod ID: M6ASITE043503 | Click to Show/Hide the Full List | ||
| mod site | chr1:114032424-114032425:+ | [8] | |
| Sequence | CCTGCACCCAGGGGAAATAAACAGCCTTGTTGCTCACACAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | H1B; H1A; hESCs; fibroblasts | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000633022.1; rmsk_234873; ENST00000632517.1 | ||
| External Link | RMBase: m6A_site_46409 | ||
| mod ID: M6ASITE086577 | Click to Show/Hide the Full List | ||
| mod site | chr1:224010470-224010471:+ | [9] | |
| Sequence | CCGTCCCTGCCCACCAGAGAACAACCCCCTTTGACTGTAAT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HEK293T; Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | rmsk_396776; ENST00000540997.2 | ||
| External Link | RMBase: m6A_site_80762 | ||
| mod ID: M6ASITE086578 | Click to Show/Hide the Full List | ||
| mod site | chr1:224010519-224010520:+ | [9] | |
| Sequence | ACCCACCCAAATCCTATAAAACAGCCCCACCCCTGTCTCCC | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HEK293T; Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | rmsk_396776; ENST00000540997.2 | ||
| External Link | RMBase: m6A_site_80763 | ||
| mod ID: M6ASITE086579 | Click to Show/Hide the Full List | ||
| mod site | chr1:224010560-224010561:+ | [5] | |
| Sequence | TTCACTGACTCCTTTTTCAGACTCAGCCTGCCTGCACCCAG | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HEK293T; Huh7 | ||
| Seq Type List | MeRIP-seq; DART-seq | ||
| Transcript ID List | ENST00000540997.2; rmsk_396776 | ||
| External Link | RMBase: m6A_site_80764 | ||
| mod ID: M6ASITE086580 | Click to Show/Hide the Full List | ||
| mod site | chr1:224010590-224010591:+ | [9] | |
| Sequence | CCTGCACCCAGGTGAAATAAACAGCCTTGTTGCTCACACAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HEK293T; Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | rmsk_396776; ENST00000540997.2 | ||
| External Link | RMBase: m6A_site_80765 | ||
| mod ID: M6ASITE007837 | Click to Show/Hide the Full List | ||
| mod site | chr11:71505737-71505738:+ | [9] | |
| Sequence | CCACTCCTGTCTGCCAGAGAACAACCCCCCTTTGACTGTAA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000624637.1; rmsk_3582557; ENST00000527963.1; ENST00000525593.5 | ||
| External Link | RMBase: m6A_site_153526 | ||
| mod ID: M6ASITE007838 | Click to Show/Hide the Full List | ||
| mod site | chr11:71505826-71505827:+ | [9] | |
| Sequence | CTTTCGCTGACTCTTTTCAGACTCAGCCCGCCTGCACCCAG | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000525593.5; ENST00000624637.1; rmsk_3582557; ENST00000527963.1 | ||
| External Link | RMBase: m6A_site_153527 | ||
| mod ID: M6ASITE013232 | Click to Show/Hide the Full List | ||
| mod site | chr12:54948064-54948065:- | [10] | |
| Sequence | TTTGCTGACTCTCTTTTTGGACTCAGCCTGCCTGCACCCAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | MT4 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | rmsk_3796317; ENST00000524622.5; ENST00000449076.6 | ||
| External Link | RMBase: m6A_site_191693 | ||
| mod ID: M6ASITE013233 | Click to Show/Hide the Full List | ||
| mod site | chr12:54948105-54948106:- | [10] | |
| Sequence | ACCTACCTAAATCCTATAAAACAGCCCCACCCCTATCTCCC | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | MT4 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000449076.6; rmsk_3796317; ENST00000524622.5 | ||
| External Link | RMBase: m6A_site_191694 | ||
| mod ID: M6ASITE014192 | Click to Show/Hide the Full List | ||
| mod site | chr12:75484538-75484539:- | [9] | |
| Sequence | GCTTTATTGCTCACACAAAGACTGTTTGGTGGTCTCTTCAC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HEK293T; Huh7; TREX | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | rmsk_3833076; ENST00000547326.2 | ||
| External Link | RMBase: m6A_site_199541 | ||
| mod ID: M6ASITE014193 | Click to Show/Hide the Full List | ||
| mod site | chr12:75484589-75484590:- | [3] | |
| Sequence | TTCATTGACTCTCTTTTTGAACTCAGCCTGCCTGTACCCAG | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HEK293T; Huh7; MSC; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000547326.2; rmsk_3833076 | ||
| External Link | RMBase: m6A_site_199542 | ||
| mod ID: M6ASITE014194 | Click to Show/Hide the Full List | ||
| mod site | chr12:75484629-75484630:- | [3] | |
| Sequence | CATTACCCAAATCCTATAAAACAGCTCCACCCCATCTCCCT | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; HEK293T; Huh7; HEK293A-TOA; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | rmsk_3833076; ENST00000547326.2 | ||
| External Link | RMBase: m6A_site_199543 | ||
| mod ID: M6ASITE014195 | Click to Show/Hide the Full List | ||
| mod site | chr12:75484674-75484675:- | [3] | |
| Sequence | CCACCCCTGCCAGCCAGAGAACAACCCCCTTTGACTGTAAT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HEK293T; Huh7; HEK293A-TOA; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000547326.2; rmsk_3833076 | ||
| External Link | RMBase: m6A_site_199544 | ||
| mod ID: M6ASITE025082 | Click to Show/Hide the Full List | ||
| mod site | chr15:101072757-101072758:+ | [6] | |
| Sequence | CCACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | GM12878; LCLs; iSLK; MSC | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | rmsk_4435052; ENST00000388948.8; ENST00000526457.3 | ||
| External Link | RMBase: m6A_site_297735 | ||
| mod ID: M6ASITE025083 | Click to Show/Hide the Full List | ||
| mod site | chr15:101072838-101072839:+ | [9] | |
| Sequence | TTCACTGACTCCCTTTTCGGACTCAGCCCACCTGCGCCCAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | LCLs | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | rmsk_4435052; ENST00000526457.3; ENST00000388948.8 | ||
| External Link | RMBase: m6A_site_297736 | ||
| mod ID: M6ASITE025084 | Click to Show/Hide the Full List | ||
| mod site | chr15:101072868-101072869:+ | [9] | |
| Sequence | CCTGCGCCCAGGTGAAATAAACAGCCTTGTTGCTCACACAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | LCLs | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000526457.3; ENST00000388948.8; rmsk_4435052 | ||
| External Link | RMBase: m6A_site_297737 | ||
| mod ID: M6ASITE025085 | Click to Show/Hide the Full List | ||
| mod site | chr16:74846-74847:+ | [9] | |
| Sequence | CCACTCCTCCCCGCCACAGAACAACCCCCTTTGACTGTAAT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | rmsk_4436994; ENST00000624755.1 | ||
| External Link | RMBase: m6A_site_298325 | ||
| mod ID: M6ASITE025086 | Click to Show/Hide the Full List | ||
| mod site | chr16:74885-74886:+ | [9] | |
| Sequence | ATTTTCCACTGCCCGCCCAAACCCTATAAAACGGTCCCACC | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000624755.1; rmsk_4436994 | ||
| External Link | RMBase: m6A_site_298326 | ||
| mod ID: M6ASITE025087 | Click to Show/Hide the Full List | ||
| mod site | chr16:74938-74939:+ | [9] | |
| Sequence | CCTGACTCTCTTTTCTTCGGACTCAGCCCGCCTGCACCCAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000624755.1; rmsk_4436994 | ||
| External Link | RMBase: m6A_site_298327 | ||
| mod ID: M6ASITE041241 | Click to Show/Hide the Full List | ||
| mod site | chr19:39493658-39493659:+ | [5] | |
| Sequence | CCACTCCTGCCCGCCCTTTGACTGTAATTTTCCATTACCTT | ||
| Motif Score | 3.28175 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | rmsk_4996151; ENST00000607714.6; ENST00000595527.2; ENST00000600878.1 | ||
| External Link | RMBase: m6A_site_438875 | ||
| mod ID: M6ASITE045508 | Click to Show/Hide the Full List | ||
| mod site | chr2:64252718-64252719:+ | [6] | |
| Sequence | CCACTCCTGCCTGCCAGAGAACAAACCCCCTTTGACTGTAA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HEK293T; GM12878; LCLs; Huh7 | ||
| Seq Type List | MeRIP-seq; m6A-seq | ||
| Transcript ID List | ENST00000451350.1; rmsk_562065 | ||
| External Link | RMBase: m6A_site_475511 | ||
| mod ID: M6ASITE049550 | Click to Show/Hide the Full List | ||
| mod site | chr2:201221524-201221525:+ | [9] | |
| Sequence | CCATCCCTGCCAGCCAGAGAACAACCCCCTTTGACTGTAAT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | Huh7; TREX | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000448480.1; ENST00000286186.10; rmsk_790741; ENST00000272879.9; ENST00000360132.7 | ||
| External Link | RMBase: m6A_site_506511 | ||
| mod ID: M6ASITE049551 | Click to Show/Hide the Full List | ||
| mod site | chr2:201221614-201221615:+ | [9] | |
| Sequence | TTCACTGACTTTCTTTTCGGACTCAGCCCACCTGCACCCAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000360132.7; ENST00000286186.10; rmsk_790741; ENST00000448480.1; ENST00000272879.9 | ||
| External Link | RMBase: m6A_site_506512 | ||
| mod ID: M6ASITE061390 | Click to Show/Hide the Full List | ||
| mod site | chr3:54634540-54634541:- | [8] | |
| Sequence | CCTGCACCCAGGTGAAATAAACAGCCTTGTTGCTCACACAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | H1A; H1B | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000583516.1; rmsk_969181 | ||
| External Link | RMBase: m6A_site_595231 | ||
| mod ID: M6ASITE085559 | Click to Show/Hide the Full List | ||
| mod site | chr8:71675329-71675330:+ | [8] | |
| Sequence | CCTGCACCCAGGTGAAATAAACAGCCATGTTGCTCACACAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | H1A; H1B | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000519840.1; rmsk_2546467 | ||
| External Link | RMBase: m6A_site_800349 | ||
| mod ID: M6ASITE092889 | Click to Show/Hide the Full List | ||
| mod site | chrX:92100602-92100603:- | [4] | |
| Sequence | CCGGAAGTAACTGAAGAATCACAAAAGAAGTGAATATGCCC | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | rmsk_3062289 | ||
| External Link | RMBase: m6A_site_866704 | ||
Pseudouridine (Pseudo)
| In total 2 m6A sequence/site(s) in this target gene | |||
| mod ID: PSESITE000124 | Click to Show/Hide the Full List | ||
| mod site | chr19:28435443-28435444:- | [11] | |
| Sequence | CTCCCTTCACTAACTCTCTTTTCGGACTCAGCCTGCCTGCA | ||
| Transcript ID List | rmsk_4971418; ENST00000592347.5 | ||
| External Link | RMBase: Pseudo_site_2469 | ||
| mod ID: PSESITE000136 | Click to Show/Hide the Full List | ||
| mod site | chr2:20088031-20088032:+ | [11] | |
| Sequence | CTCCCTTCACTAACTCTCTTTTCGGACTCAGCCTGCCTGCA | ||
| Transcript ID List | rmsk_479187 | ||
| External Link | RMBase: Pseudo_site_2563 | ||
References
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