Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00158)

Target Name	Cytochrome c, somatic (CYCS)
Synonyms	HCS; CYC Click to Show/Hide
Gene Name	CYCS
Sequence	MGDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE Click to Show/Hide
Family	Cytochrome c family
Function	Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. Click to Show/Hide
Gene ID	54205
HGNC ID	HGNC:19986
Ensembl Gene ID	ENSG00000172115
KEGG ID	hsa:54205
Chromosomal Location	7p15.3

RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00158)

Cytochrome c, somatic (CYCS)

Adenosine-to-Inosine editing (A-to-I)

In total 37 m6A sequence/site(s) in this target gene
mod ID: A2ISITE001951		Click to Show/Hide the Full List
mod site	chr7:25120152-25120153:-		[1]
Sequence	GTGGAGGTTGCAGTGAGCCAAGATTGTGCCACTGCACTCAA
Transcript ID List	ENST00000305786.6; rmsk_2185797
External Link	RMBase: RNA-editing_site_121422
mod ID: A2ISITE001952		Click to Show/Hide the Full List
mod site	chr7:25120153-25120154:-		[2]
Sequence	GGTGGAGGTTGCAGTGAGCCAAGATTGTGCCACTGCACTCA
Transcript ID List	ENST00000305786.6; rmsk_2185797
External Link	RMBase: RNA-editing_site_121423
mod ID: A2ISITE001953		Click to Show/Hide the Full List
mod site	chr7:25120161-25120162:-		[1]
Sequence	ACTTGGGAGGTGGAGGTTGCAGTGAGCCAAGATTGTGCCAC
Transcript ID List	ENST00000305786.6; rmsk_2185797
External Link	RMBase: RNA-editing_site_121424
mod ID: A2ISITE001954		Click to Show/Hide the Full List
mod site	chr7:25120187-25120188:-		[1]
Sequence	GAGGCTGAGGCACAAGAATCACTTGAACTTGGGAGGTGGAG
Transcript ID List	rmsk_2185797; ENST00000305786.6
External Link	RMBase: RNA-editing_site_121425
mod ID: A2ISITE001955		Click to Show/Hide the Full List
mod site	chr7:25120190-25120191:-		[1]
Sequence	TGGGAGGCTGAGGCACAAGAATCACTTGAACTTGGGAGGTG
Transcript ID List	rmsk_2185797; ENST00000305786.6
External Link	RMBase: RNA-editing_site_121426
mod ID: A2ISITE001956		Click to Show/Hide the Full List
mod site	chr7:25120222-25120223:-		[1]
Sequence	TGTGGTGGTGGGCACCTGTAATCTCAGCTACTTGGGAGGCT
Transcript ID List	rmsk_2185797; ENST00000305786.6
External Link	RMBase: RNA-editing_site_121427
mod ID: A2ISITE001957		Click to Show/Hide the Full List
mod site	chr7:25120223-25120224:-		[1]
Sequence	GTGTGGTGGTGGGCACCTGTAATCTCAGCTACTTGGGAGGC
Transcript ID List	rmsk_2185797; ENST00000305786.6
External Link	RMBase: RNA-editing_site_121428
mod ID: A2ISITE001958		Click to Show/Hide the Full List
mod site	chr7:25120245-25120246:-		[1]
Sequence	AAAAAACATAAAAATTAGCCAGGTGTGGTGGTGGGCACCTG
Transcript ID List	ENST00000305786.6; rmsk_2185797
External Link	RMBase: RNA-editing_site_121429
mod ID: A2ISITE001959		Click to Show/Hide the Full List
mod site	chr7:25120252-25120253:-		[1]
Sequence	TCTCTACAAAAAACATAAAAATTAGCCAGGTGTGGTGGTGG
Transcript ID List	rmsk_2185797; ENST00000305786.6
External Link	RMBase: RNA-editing_site_121430
mod ID: A2ISITE001960		Click to Show/Hide the Full List
mod site	chr7:25120253-25120254:-		[1]
Sequence	GTCTCTACAAAAAACATAAAAATTAGCCAGGTGTGGTGGTG
Transcript ID List	rmsk_2185797; ENST00000305786.6
External Link	RMBase: RNA-editing_site_121431
mod ID: A2ISITE001961		Click to Show/Hide the Full List
mod site	chr7:25120312-25120313:-		[1]
Sequence	CAGGCAGATCACTTGAGGTCAGGCGTTTGAGACCAGCCTGG
Transcript ID List	rmsk_2185797; ENST00000305786.6
External Link	RMBase: RNA-editing_site_121432
mod ID: A2ISITE001962		Click to Show/Hide the Full List
mod site	chr7:25120327-25120328:-		[1]
Sequence	TTTGGGAGGCCAAGGCAGGCAGATCACTTGAGGTCAGGCGT
Transcript ID List	rmsk_2185797; ENST00000305786.6
External Link	RMBase: RNA-editing_site_121433
mod ID: A2ISITE001963		Click to Show/Hide the Full List
mod site	chr7:25120336-25120337:-		[3]
Sequence	TCCCAGCACTTTGGGAGGCCAAGGCAGGCAGATCACTTGAG
Transcript ID List	ENST00000305786.6; rmsk_2185797
External Link	RMBase: RNA-editing_site_121434
mod ID: A2ISITE001964		Click to Show/Hide the Full List
mod site	chr7:25120357-25120358:-		[1]
Sequence	CATGGTCGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCC
Transcript ID List	ENST00000305786.6; rmsk_2185797
External Link	RMBase: RNA-editing_site_121435
mod ID: A2ISITE001965		Click to Show/Hide the Full List
mod site	chr7:25120358-25120359:-		[1]
Sequence	GCATGGTCGCTCATGCCTGTAATCCCAGCACTTTGGGAGGC
Transcript ID List	rmsk_2185797; ENST00000305786.6
External Link	RMBase: RNA-editing_site_121436
mod ID: A2ISITE001966		Click to Show/Hide the Full List
mod site	chr7:25120384-25120385:-		[1]
Sequence	ACTCTATTAAATCTAGAATTAGCCGGGCATGGTCGCTCATG
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121437
mod ID: A2ISITE001967		Click to Show/Hide the Full List
mod site	chr7:25120475-25120476:-		[2]
Sequence	TTACATAGGCACAAGTGGCTAGTGGCTACTGTATTGACATT
Transcript ID List	rmsk_2185798; ENST00000305786.6
External Link	RMBase: RNA-editing_site_121438
mod ID: A2ISITE001968		Click to Show/Hide the Full List
mod site	chr7:25120482-25120483:-		[2]
Sequence	TTTAAATTTACATAGGCACAAGTGGCTAGTGGCTACTGTAT
Transcript ID List	ENST00000305786.6; rmsk_2185798
External Link	RMBase: RNA-editing_site_121439
mod ID: A2ISITE001969		Click to Show/Hide the Full List
mod site	chr7:25120568-25120569:-		[2]
Sequence	CTTTTGCTGTCCAGTGTGGTAGCCACTAACCACATGTGGCT
Transcript ID List	rmsk_2185798; ENST00000305786.6
External Link	RMBase: RNA-editing_site_121440
mod ID: A2ISITE001970		Click to Show/Hide the Full List
mod site	chr7:25120898-25120899:-		[1]
Sequence	CTCCCGACGTCAGGTGATCTACCTGCCTCGGCCTCCCAAAG
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121441
mod ID: A2ISITE001971		Click to Show/Hide the Full List
mod site	chr7:25120907-25120908:-		[1]
Sequence	GGTCTTGAACTCCCGACGTCAGGTGATCTACCTGCCTCGGC
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121442
mod ID: A2ISITE001972		Click to Show/Hide the Full List
mod site	chr7:25120956-25120957:-		[2]
Sequence	TTATTTTGTGTTTTTAGTAGAGACAGGGTTTCTCCATGCTG
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121443
mod ID: A2ISITE001973		Click to Show/Hide the Full List
mod site	chr7:25120979-25120980:-		[1]
Sequence	AAGCATGCGCCACCATGCCCAGCTTATTTTGTGTTTTTAGT
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121444
mod ID: A2ISITE001974		Click to Show/Hide the Full List
mod site	chr7:25121001-25121002:-		[1]
Sequence	CCTCTCAAGTAGCTGGGATTACAAGCATGCGCCACCATGCC
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121445
mod ID: A2ISITE001975		Click to Show/Hide the Full List
mod site	chr7:25121011-25121012:-		[1]
Sequence	CCTGACTCAGCCTCTCAAGTAGCTGGGATTACAAGCATGCG
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121446
mod ID: A2ISITE001976		Click to Show/Hide the Full List
mod site	chr7:25121040-25121041:-		[4]
Sequence	ACCTCCGCCTTCCAGGTTCAAGCGATTCTCCTGACTCAGCC
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121447
mod ID: A2ISITE001977		Click to Show/Hide the Full List
mod site	chr7:25121041-25121042:-		[5]
Sequence	AACCTCCGCCTTCCAGGTTCAAGCGATTCTCCTGACTCAGC
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121448
mod ID: A2ISITE001978		Click to Show/Hide the Full List
mod site	chr7:25121110-25121111:-		[1]
Sequence	TATTTTTTTGAGATAATTTCACTCTTGTTGCCCAGGCTGGA
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121449
mod ID: A2ISITE001979		Click to Show/Hide the Full List
mod site	chr7:25121115-25121116:-		[1]
Sequence	ATTTTTATTTTTTTGAGATAATTTCACTCTTGTTGCCCAGG
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121450
mod ID: A2ISITE001980		Click to Show/Hide the Full List
mod site	chr7:25121287-25121288:-		[4]
Sequence	CCTCCCAAAGTTCTAGGATTACAGGTGTGAGCCACCACGTC
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121451
mod ID: A2ISITE001981		Click to Show/Hide the Full List
mod site	chr7:25121293-25121294:-		[4]
Sequence	CCTTGGCCTCCCAAAGTTCTAGGATTACAGGTGTGAGCCAC
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121452
mod ID: A2ISITE001982		Click to Show/Hide the Full List
mod site	chr7:25121420-25121421:-		[1]
Sequence	CCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCACGCC
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121453
mod ID: A2ISITE001983		Click to Show/Hide the Full List
mod site	chr7:25121671-25121672:-		[1]
Sequence	CTCCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCAGGCC
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121454
mod ID: A2ISITE001984		Click to Show/Hide the Full List
mod site	chr7:25121777-25121778:-		[2]
Sequence	TTCGCCACCATGCCCAGCTAATTTTTTTGTAGAGATGGAGT
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121455
mod ID: A2ISITE001985		Click to Show/Hide the Full List
mod site	chr7:25121802-25121803:-		[1]
Sequence	TCCCAAGTAGCTGGGACTACAGGTGTTCGCCACCATGCCCA
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121456
mod ID: A2ISITE001986		Click to Show/Hide the Full List
mod site	chr7:25121804-25121805:-		[1]
Sequence	CTTCCCAAGTAGCTGGGACTACAGGTGTTCGCCACCATGCC
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121457
mod ID: A2ISITE001987		Click to Show/Hide the Full List
mod site	chr7:25121863-25121864:-		[1]
Sequence	TGCGATCTCGGCTGGCTGCAACCTCTATTTCCCAGGCTCAA
Transcript ID List	ENST00000305786.6
External Link	RMBase: RNA-editing_site_121458

2'-O-Methylation (2'-O-Me)

In total 1 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000434		Click to Show/Hide the Full List
mod site	chr7:25125200-25125201:-		[6]
Sequence	TTGTGCCAGCGACTAAAAAGAGGTGAGAGCGGGTCGCGGAG
Cell/Tissue List	HeLa
Seq Type List	Nm-seq
Transcript ID List	ENST00000305786.6; ENST00000413447.1; ENST00000409764.5; ENST00000409409.5
External Link	RMBase: Nm_site_6070

N1-methyladenosine (m1A)

In total 1 m6A sequence/site(s) in this target gene
mod ID: M1ASITE000111		Click to Show/Hide the Full List
mod site	chr7:25125263-25125264:-		[7]
Sequence	GCGGACCGGCGTGTCCTTGGACTTAGAGAGTGGGGACGTCC
Cell/Tissue List	HEK293T
Seq Type List	m1A-MAP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m1A_site_939

5-methylcytidine (m5C)

In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004097		Click to Show/Hide the Full List
mod site	chr7:25124022-25124023:-
Sequence	AGCACAAGACTGGGCCAAATCTCCATGGTCTCTTTGGGCGG
Cell/Tissue List	frontalcortex; liver; testis
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000409409.5; ENST00000409764.5; ENST00000305786.6; ENST00000413447.1
External Link	RMBase: m5C_site_39141

N6-methyladenosine (m6A)

In total 48 m6A sequence/site(s) in this target gene
mod ID: M6ASITE079093		Click to Show/Hide the Full List
mod site	chr7:25120934-25120935:-		[8]
Sequence	ACAGGGTTTCTCCATGCTGGACAGGCTGGTCTTGAACTCCC
Motif Score	3.643047619
Cell/Tissue List	CD34
Seq Type List	m6A-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750728
mod ID: M6ASITE079094		Click to Show/Hide the Full List
mod site	chr7:25120954-25120955:-		[8]
Sequence	ATTTTGTGTTTTTAGTAGAGACAGGGTTTCTCCATGCTGGA
Motif Score	2.897386905
Cell/Tissue List	CD34
Seq Type List	m6A-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750729
mod ID: M6ASITE079096		Click to Show/Hide the Full List
mod site	chr7:25122296-25122297:-		[9]
Sequence	AGGCCTGAAAGCAATTTATAACATATGAGTCTTATTTTTAT
Motif Score	2.168095238
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750730
mod ID: M6ASITE079097		Click to Show/Hide the Full List
mod site	chr7:25122376-25122377:-		[10]
Sequence	CTTTGTGGGACAGTGAGAAGACTGAGAAGATGTGAATCCAT
Motif Score	3.319380952
Cell/Tissue List	Huh7
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750731
mod ID: M6ASITE079098		Click to Show/Hide the Full List
mod site	chr7:25122387-25122388:-		[10]
Sequence	GAGAACTGTATCTTTGTGGGACAGTGAGAAGACTGAGAAGA
Motif Score	3.643047619
Cell/Tissue List	Huh7
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750732
mod ID: M6ASITE079099		Click to Show/Hide the Full List
mod site	chr7:25122403-25122404:-		[10]
Sequence	CTATGCTGGTGCAGCTGAGAACTGTATCTTTGTGGGACAGT
Motif Score	3.373380952
Cell/Tissue List	Huh7
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750733
mod ID: M6ASITE079100		Click to Show/Hide the Full List
mod site	chr7:25122838-25122839:-		[11]
Sequence	TAAAGATAATTAAAAAGAAAACCACAGATCATGACTTTTTG
Motif Score	2.185083333
Cell/Tissue List	HeLa; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750734
mod ID: M6ASITE079101		Click to Show/Hide the Full List
mod site	chr7:25122860-25122861:-		[11]
Sequence	AAATTATGTGTGATCACAAGACTAAAGATAATTAAAAAGAA
Motif Score	3.319380952
Cell/Tissue List	HeLa; HEK293T; Huh7
Seq Type List	m6A-seq; DART-seq; MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750735
mod ID: M6ASITE079102		Click to Show/Hide the Full List
mod site	chr7:25122865-25122866:-		[12]
Sequence	TTTTAAAATTATGTGTGATCACAAGACTAAAGATAATTAAA
Motif Score	2.047297619
Cell/Tissue List	brain
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750736
mod ID: M6ASITE079103		Click to Show/Hide the Full List
mod site	chr7:25122892-25122893:-		[9]
Sequence	GATTAAAGTAACGGAGATATACACAAATTTTAAAATTATGT
Motif Score	2.110482143
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750737
mod ID: M6ASITE079104		Click to Show/Hide the Full List
mod site	chr7:25122921-25122922:-		[13]
Sequence	TGGGAATGGTGCTTTTGCCAACTTAAAAGGATTAAAGTAAC
Motif Score	2.595904762
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750738
mod ID: M6ASITE079105		Click to Show/Hide the Full List
mod site	chr7:25122955-25122956:-		[11]
Sequence	TTCAGAAACAAAACTGTAGAACTGTGTATTTGATTGGGAAT
Motif Score	3.373380952
Cell/Tissue List	HeLa; hNPCs; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750739
mod ID: M6ASITE079107		Click to Show/Hide the Full List
mod site	chr7:25122963-25122964:-		[11]
Sequence	AACAGCCATTCAGAAACAAAACTGTAGAACTGTGTATTTGA
Motif Score	2.627720238
Cell/Tissue List	HeLa; HEK293T; Huh7
Seq Type List	m6A-seq; DART-seq; MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750740
mod ID: M6ASITE079108		Click to Show/Hide the Full List
mod site	chr7:25122968-25122969:-		[11]
Sequence	CTTTAAACAGCCATTCAGAAACAAAACTGTAGAACTGTGTA
Motif Score	2.20572619
Cell/Tissue List	HeLa; hESC-HEK293T; Huh7
Seq Type List	m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750741
mod ID: M6ASITE079109		Click to Show/Hide the Full List
mod site	chr7:25122982-25122983:-		[11]
Sequence	TAATTTAGGATTGTCTTTAAACAGCCATTCAGAAACAAAAC
Motif Score	2.20572619
Cell/Tissue List	HeLa; HEK293T; Huh7
Seq Type List	m6A-seq; DART-seq; MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750742
mod ID: M6ASITE079110		Click to Show/Hide the Full List
mod site	chr7:25123011-25123012:-		[11]
Sequence	TTCTTTACAATCTAAGTCAAACTAAGTTATAATTTAGGATT
Motif Score	2.627720238
Cell/Tissue List	HeLa; HEK293T; Huh7
Seq Type List	m6A-seq; DART-seq; MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750743
mod ID: M6ASITE079111		Click to Show/Hide the Full List
mod site	chr7:25123025-25123026:-		[9]
Sequence	ACTTCACTCTTGAATTCTTTACAATCTAAGTCAAACTAAGT
Motif Score	2.07285119
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750744
mod ID: M6ASITE079112		Click to Show/Hide the Full List
mod site	chr7:25123045-25123046:-		[11]
Sequence	TTAAAATAGTAGCAAGTTAAACTTCACTCTTGAATTCTTTA
Motif Score	2.627720238
Cell/Tissue List	HeLa; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750745
mod ID: M6ASITE079113		Click to Show/Hide the Full List
mod site	chr7:25123073-25123074:-		[9]
Sequence	TCTTACAGATCTATAAGGTCACATGCTTTTAAAATAGTAGC
Motif Score	2.047297619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750746
mod ID: M6ASITE079114		Click to Show/Hide the Full List
mod site	chr7:25123096-25123097:-		[13]
Sequence	AAGATTATTCAACACCTCTCACATCTTACAGATCTATAAGG
Motif Score	2.047297619
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750747
mod ID: M6ASITE079115		Click to Show/Hide the Full List
mod site	chr7:25123105-25123106:-		[13]
Sequence	GTAATATTAAAGATTATTCAACACCTCTCACATCTTACAGA
Motif Score	2.173910714
Cell/Tissue List	HEK293T; hESC-HEK293T
Seq Type List	DART-seq; MAZTER-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750748
mod ID: M6ASITE079116		Click to Show/Hide the Full List
mod site	chr7:25123158-25123159:-		[13]
Sequence	TATTTAAAATGGTTTCTTTTACTTATTGAAAGGCATTTTAG
Motif Score	2.494845238
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750749
mod ID: M6ASITE079118		Click to Show/Hide the Full List
mod site	chr7:25123206-25123207:-		[13]
Sequence	TGTCTATAGTTTTGGCCTTAACTATGCCAATCTAATTATAA
Motif Score	2.590089286
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750750
mod ID: M6ASITE079119		Click to Show/Hide the Full List
mod site	chr7:25123307-25123308:-		[11]
Sequence	AATTGCTTCACTGTCTTAGAACCAAGCAAGATTCACCTGTG
Motif Score	2.930744048
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000305786.6; ENST00000409409.5
External Link	RMBase: m6A_site_750751
mod ID: M6ASITE079120		Click to Show/Hide the Full List
mod site	chr7:25123318-25123319:-		[13]
Sequence	AATACTGGGGAAATTGCTTCACTGTCTTAGAACCAAGCAAG
Motif Score	2.469291667
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000305786.6; ENST00000409409.5
External Link	RMBase: m6A_site_750752
mod ID: M6ASITE079121		Click to Show/Hide the Full List
mod site	chr7:25123335-25123336:-		[13]
Sequence	TTATGTGAATATATTTAAATACTGGGGAAATTGCTTCACTG
Motif Score	2.53247619
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000305786.6; ENST00000409409.5
External Link	RMBase: m6A_site_750753
mod ID: M6ASITE079122		Click to Show/Hide the Full List
mod site	chr7:25123360-25123361:-		[13]
Sequence	TTTATATTTAGATTTATATAACTGGTTATGTGAATATATTT
Motif Score	2.590089286
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000305786.6; ENST00000409409.5
External Link	RMBase: m6A_site_750754
mod ID: M6ASITE079123		Click to Show/Hide the Full List
mod site	chr7:25123397-25123398:-		[11]
Sequence	ATGGTGAGTGCCATCTTAAAACTTACTGGAGATTGGTTTTA
Motif Score	2.627720238
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000409409.5; ENST00000305786.6
External Link	RMBase: m6A_site_750755
mod ID: M6ASITE079124		Click to Show/Hide the Full List
mod site	chr7:25123423-25123424:-		[9]
Sequence	TTAGTAATGTTCAACTTTTCACAAAGATGGTGAGTGCCATC
Motif Score	2.047297619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000409409.5; ENST00000305786.6
External Link	RMBase: m6A_site_750756
mod ID: M6ASITE079125		Click to Show/Hide the Full List
mod site	chr7:25123449-25123450:-		[11]
Sequence	CCTTTTAAAGATATGATTAGACTTCGTTAGTAATGTTCAAC
Motif Score	3.319380952
Cell/Tissue List	HeLa; HEK293T
Seq Type List	m6A-seq; DART-seq
Transcript ID List	ENST00000409409.5; ENST00000409764.5; ENST00000305786.6
External Link	RMBase: m6A_site_750757
mod ID: M6ASITE079126		Click to Show/Hide the Full List
mod site	chr7:25123551-25123552:-		[11]
Sequence	AGTCCTGATTTAAAACTAAGACTGGCTTGTGGTTAAATGAA
Motif Score	3.319380952
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000409764.5; ENST00000305786.6; ENST00000409409.5
External Link	RMBase: m6A_site_750758
mod ID: M6ASITE079127		Click to Show/Hide the Full List
mod site	chr7:25123557-25123558:-		[11]
Sequence	TTGGGCAGTCCTGATTTAAAACTAAGACTGGCTTGTGGTTA
Motif Score	2.627720238
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000409409.5; ENST00000305786.6; ENST00000409764.5
External Link	RMBase: m6A_site_750759
mod ID: M6ASITE079129		Click to Show/Hide the Full List
mod site	chr7:25123618-25123619:-		[9]
Sequence	CATCCTTTAATAGATCTCATACACCAGAATTCAGATCATGA
Motif Score	2.110482143
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000409409.5; ENST00000305786.6; ENST00000409764.5
External Link	RMBase: m6A_site_750760
mod ID: M6ASITE079130		Click to Show/Hide the Full List
mod site	chr7:25123670-25123671:-		[14]
Sequence	ACTGCCTTATTTATTACAAAACAGAAATGTCTCATGACTTT
Motif Score	2.20572619
Cell/Tissue List	hNPCs; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000409409.5; ENST00000305786.6; ENST00000409764.5
External Link	RMBase: m6A_site_750761
mod ID: M6ASITE079131		Click to Show/Hide the Full List
mod site	chr7:25123675-25123676:-		[9]
Sequence	TGGCCACTGCCTTATTTATTACAAAACAGAAATGTCTCATG
Motif Score	2.07285119
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000305786.6; ENST00000409764.5; ENST00000409409.5
External Link	RMBase: m6A_site_750762
mod ID: M6ASITE079132		Click to Show/Hide the Full List
mod site	chr7:25123737-25123738:-		[13]
Sequence	GAAGAAGGAAGAAAGGGCAGACTTAATAGCTTATCTCAAAA
Motif Score	3.319380952
Cell/Tissue List	HEK293T; hNPCs; fibroblasts; A549; H1299; Huh7
Seq Type List	DART-seq; m6A-seq; m6A-CLIP/IP; MeRIP-seq
Transcript ID List	ENST00000305786.6; ENST00000413447.1; ENST00000409764.5; ENST00000409409.5
External Link	RMBase: m6A_site_750763
mod ID: M6ASITE079133		Click to Show/Hide the Full List
mod site	chr7:25123783-25123784:-		[15]
Sequence	CCAAGAAGTACATCCCTGGAACAAAAATGATCTTTGTCGGC
Motif Score	2.951386905
Cell/Tissue List	HepG2; A549; hESC-HEK293T; hNPCs; fibroblasts; H1299; Huh7; peripheral-blood; TREX; iSLK
Seq Type List	m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List	ENST00000305786.6; ENST00000409409.5; ENST00000413447.1; ENST00000409764.5
External Link	RMBase: m6A_site_750764
mod ID: M6ASITE079134		Click to Show/Hide the Full List
mod site	chr7:25123955-25123956:-		[11]
Sequence	TTACACAGCCGCCAATAAGAACAAAGGTAAGAGTCACTTGT
Motif Score	2.951386905
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; fibroblasts; H1299; Huh7; peripheral-blood; TREX; iSLK; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000305786.6; ENST00000413447.1; ENST00000409409.5; ENST00000409764.5
External Link	RMBase: m6A_site_750765
mod ID: M6ASITE079135		Click to Show/Hide the Full List
mod site	chr7:25123998-25123999:-		[11]
Sequence	ATGGTCTCTTTGGGCGGAAGACAGGTCAGGCCCCTGGATAC
Motif Score	2.897386905
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; fibroblasts; H1299; Huh7; peripheral-blood; TIME; TREX; iSLK; MSC
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000413447.1; ENST00000409409.5; ENST00000305786.6; ENST00000409764.5
External Link	RMBase: m6A_site_750766
mod ID: M6ASITE079136		Click to Show/Hide the Full List
mod site	chr7:25124034-25124035:-		[11]
Sequence	AAAAGGGAGGCAAGCACAAGACTGGGCCAAATCTCCATGGT
Motif Score	3.319380952
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; fibroblasts; Huh7; peripheral-blood; HEK293A-TOA; MSC; TIME; TREX; iSLK
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000409409.5; ENST00000409764.5; ENST00000413447.1; ENST00000305786.6
External Link	RMBase: m6A_site_750767
mod ID: M6ASITE079137		Click to Show/Hide the Full List
mod site	chr7:25124039-25124040:-		[9]
Sequence	CGTTGAAAAGGGAGGCAAGCACAAGACTGGGCCAAATCTCC
Motif Score	2.830589286
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000409409.5; ENST00000305786.6; ENST00000413447.1; ENST00000409764.5
External Link	RMBase: m6A_site_750768
mod ID: M6ASITE079138		Click to Show/Hide the Full List
mod site	chr7:25124063-25124064:-		[12]
Sequence	TATGAAGTGTTCCCAGTGCCACACCGTTGAAAAGGGAGGCA
Motif Score	2.053113095
Cell/Tissue List	brain; hESC-HEK293T
Seq Type List	m6A-REF-seq; MAZTER-seq
Transcript ID List	ENST00000305786.6; ENST00000409764.5; ENST00000409409.5; ENST00000413447.1
External Link	RMBase: m6A_site_750769
mod ID: M6ASITE079140		Click to Show/Hide the Full List
mod site	chr7:25124733-25124734:-		[11]
Sequence	GTTTCATCAATCACCTTGAAACCGACCTGGACGGGTGACCT
Motif Score	2.185083333
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000413447.1; ENST00000409409.5; ENST00000409764.5; ENST00000305786.6
External Link	RMBase: m6A_site_750770
mod ID: M6ASITE079141		Click to Show/Hide the Full List
mod site	chr7:25124998-25124999:-		[11]
Sequence	CGGCGGAGCCCTAACTAGGGACAGGTATGGTCTCGGTCAGG
Motif Score	3.643047619
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000409764.5; ENST00000413447.1; ENST00000409409.5; ENST00000305786.6
External Link	RMBase: m6A_site_750771
mod ID: M6ASITE079142		Click to Show/Hide the Full List
mod site	chr7:25125124-25125125:-		[11]
Sequence	CGCACTTGCGAGCGACCGAAACCCAAGCGGGGAGCATTCGA
Motif Score	2.185083333
Cell/Tissue List	HeLa; HEK293T; U2OS; HEK293A-TOA; MSC
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000305786.6; ENST00000413447.1; ENST00000409409.5; ENST00000409764.5
External Link	RMBase: m6A_site_750772
mod ID: M6ASITE079143		Click to Show/Hide the Full List
mod site	chr7:25125263-25125264:-		[11]
Sequence	GCGGACCGGCGTGTCCTTGGACTTAGAGAGTGGGGACGTCC
Motif Score	4.065041667
Cell/Tissue List	HeLa; HEK293T; HepG2; U2OS; hESCs; fibroblasts; A549; HEK293A-TOA; MSC; iSLK; TIME
Seq Type List	m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750773
mod ID: M6ASITE079144		Click to Show/Hide the Full List
mod site	chr7:25125279-25125280:-		[11]
Sequence	ACACCGGTACTTAAGCGCGGACCGGCGTGTCCTTGGACTTA
Motif Score	3.622404762
Cell/Tissue List	HeLa; HEK293T; HepG2; U2OS; hESCs; fibroblasts; A549; HEK293A-TOA; MSC; iSLK
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750774
mod ID: M6ASITE079145		Click to Show/Hide the Full List
mod site	chr7:25125299-25125300:-		[9]
Sequence	GAGCGAGTTTGGTTGCACTTACACCGGTACTTAAGCGCGGA
Motif Score	2.07285119
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000305786.6
External Link	RMBase: m6A_site_750775

Ref 1	Widespread RNA editing of embedded alu elements in the human transcriptome. Genome Res. 2004 Sep;14(9):1719-25. doi: 10.1101/gr.2855504.
Ref 2	RADAR: a rigorously annotated database of A-to-I RNA editing. Nucleic Acids Res. 2014 Jan;42(Database issue):D109-13. doi: 10.1093/nar/gkt996. Epub 2013 Oct 25.
Ref 3	Systematic identification of abundant A-to-I editing sites in the human transcriptome. Nat Biotechnol. 2004 Aug;22(8):1001-5. doi: 10.1038/nbt996. Epub 2004 Jul 18.
Ref 4	Accurate identification of A-to-I RNA editing in human by transcriptome sequencing. Genome Res. 2012 Jan;22(1):142-50. doi: 10.1101/gr.124107.111. Epub 2011 Sep 29.
Ref 5	Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome. Nat Biotechnol. 2012 Feb 12;30(3):253-60. doi: 10.1038/nbt.2122.
Ref 6	Nm-seq maps 2'-O-methylation sites in human mRNA with base precision. Nat Methods. 2017 Jul;14(7):695-698. doi: 10.1038/nmeth.4294. Epub 2017 May 15.
Ref 7	Base-Resolution Mapping Reveals Distinct m(1)A Methylome in Nuclear- and Mitochondrial-Encoded Transcripts. Mol Cell. 2017 Dec 7;68(5):993-1005.e9. doi: 10.1016/j.molcel.2017.10.019. Epub 2017 Nov 5.
Ref 8	Suppression of m(6)A reader Ythdf2 promotes hematopoietic stem cell expansion. Cell Res. 2018 Sep;28(9):904-917. doi: 10.1038/s41422-018-0072-0. Epub 2018 Jul 31.
Ref 9	Deciphering the "m(6)A Code" via Antibody-Independent Quantitative Profiling. Cell. 2019 Jul 25;178(3):731-747.e16. doi: 10.1016/j.cell.2019.06.013. Epub 2019 Jun 27.
Ref 10	N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection. Cell Host Microbe. 2016 Nov 9;20(5):654-665. doi: 10.1016/j.chom.2016.09.015. Epub 2016 Oct 20.
Ref 11	VIRMA mediates preferential m(6)A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Cell Discov. 2018 Feb 27;4:10. doi: 10.1038/s41421-018-0019-0. eCollection 2018.
Ref 12	Single-base mapping of m(6)A by an antibody-independent method. Sci Adv. 2019 Jul 3;5(7):eaax0250. doi: 10.1126/sciadv.aax0250. eCollection 2019 Jul.
Ref 13	DART-seq: an antibody-free method for global m(6)A detection. Nat Methods. 2019 Dec;16(12):1275-1280. doi: 10.1038/s41592-019-0570-0. Epub 2019 Sep 23.
Ref 14	Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites. Cell Rep. 2014 Jul 10;8(1):284-96. doi: 10.1016/j.celrep.2014.05.048. Epub 2014 Jun 26.
Ref 15	Histone H3 trimethylation at lysine 36 guides m(6)A RNA modification co-transcriptionally. Nature. 2019 Mar;567(7748):414-419. doi: 10.1038/s41586-019-1016-7. Epub 2019 Mar 13.

Epigenetic Target Information

Cite M6AREG

Correspondence

Prof. Feng ZHU

Prof. Shuiping Liu

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