Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00118)
Target Name Neurotrophic factor BDNF precursor form (BDNF)
Synonyms
proBDNF; Abrineurin; Brain-derived neurotrophic factor
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Gene Name BDNF
Sequence
MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLADTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR
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Family NGF-beta family
Function
Important signaling molecule that activates signaling cascades downstream of NTRK2 (PubMed:11152678). During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. The versatility of BDNF is emphasized by its contribution to a range of adaptive neuronal responses including long-term potentiation (LTP), long-term depression (LTD), certain forms of short-term synaptic plasticity, as well as homeostatic regulation of intrinsic neuronal excitability.
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Gene ID 627
HGNC ID HGNC:1033
Ensembl Gene ID ENSG00000176697
KEGG ID hsa:627
Chromosomal Location 11p14.1
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00118)
Neurotrophic factor BDNF precursor form (BDNF)
N6-methyladenosine (m6A)
In total 68 m6A sequence/site(s) in this target gene
mod ID: M6ASITE004444 Click to Show/Hide the Full List
mod site chr11:27655838-27655839:- [1]
Sequence AAAATGGATCCCCAGTGAAAACTAGAGCTCTAAGCCCATTC
Motif Score 2.627720238
Cell/Tissue List iSLK
Seq Type List MeRIP-seq
Transcript ID List ENST00000530786.5; ENST00000525950.5; ENST00000395978.7; ENST00000356660.9; ENST00000530861.5; ENST00000314915.6; ENST00000420794.2; ENST00000438929.5; ENST00000395986.6; ENST00000584049.5; ENST00000418212.5; ENST00000533131.5; ENST00000439476.6; ENST00000395980.6; ENST00000395981.7; ENST00000525528.1; ENST00000532997.5; ENST00000533246.5; ENST00000395983.7
External Link RMBase: m6A_site_135133
mod ID: M6ASITE004445 Click to Show/Hide the Full List
mod site chr11:27656004-27656005:- [2]
Sequence GCTCAATGGAAGAGGCCAGGACAGAGCTGACAAAATTTTGC
Motif Score 3.643047619
Cell/Tissue List HeLa; A549; HepG2; H1A; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395980.6; ENST00000314915.6; ENST00000356660.9; ENST00000395978.7; ENST00000532997.5; ENST00000438929.5; ENST00000395983.7; ENST00000395986.6; ENST00000530786.5; ENST00000533246.5; ENST00000525950.5; ENST00000530861.5; ENST00000420794.2; ENST00000525528.1; ENST00000584049.5; ENST00000418212.5; ENST00000395981.7; ENST00000533131.5; ENST00000439476.6
External Link RMBase: m6A_site_135134
mod ID: M6ASITE004446 Click to Show/Hide the Full List
mod site chr11:27656039-27656040:- [2]
Sequence TGGACATTCAGAACACCAAGACTTGAAGGTGCCTTGCTCAA
Motif Score 3.319380952
Cell/Tissue List HeLa; A549; HepG2; H1B; H1A; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395983.7; ENST00000439476.6; ENST00000525528.1; ENST00000356660.9; ENST00000530861.5; ENST00000395986.6; ENST00000530786.5; ENST00000533131.5; ENST00000532997.5; ENST00000525950.5; ENST00000314915.6; ENST00000418212.5; ENST00000395978.7; ENST00000533246.5; ENST00000395981.7; ENST00000438929.5; ENST00000420794.2; ENST00000395980.6; ENST00000584049.5
External Link RMBase: m6A_site_135135
mod ID: M6ASITE004447 Click to Show/Hide the Full List
mod site chr11:27656047-27656048:- [2]
Sequence AAGGTGTCTGGACATTCAGAACACCAAGACTTGAAGGTGCC
Motif Score 2.951386905
Cell/Tissue List HeLa; A549; HepG2; H1B; H1A; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000525950.5; ENST00000439476.6; ENST00000584049.5; ENST00000395978.7; ENST00000438929.5; ENST00000533131.5; ENST00000532997.5; ENST00000395980.6; ENST00000533246.5; ENST00000395981.7; ENST00000530786.5; ENST00000395983.7; ENST00000418212.5; ENST00000525528.1; ENST00000420794.2; ENST00000395986.6; ENST00000314915.6; ENST00000356660.9; ENST00000530861.5
External Link RMBase: m6A_site_135136
mod ID: M6ASITE004448 Click to Show/Hide the Full List
mod site chr11:27656056-27656057:- [2]
Sequence GACTTCGGGAAGGTGTCTGGACATTCAGAACACCAAGACTT
Motif Score 3.643047619
Cell/Tissue List HeLa; A549; HepG2; H1B; H1A; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000533246.5; ENST00000418212.5; ENST00000395980.6; ENST00000525950.5; ENST00000525528.1; ENST00000395981.7; ENST00000532997.5; ENST00000584049.5; ENST00000530786.5; ENST00000395983.7; ENST00000356660.9; ENST00000439476.6; ENST00000395978.7; ENST00000420794.2; ENST00000438929.5; ENST00000395986.6; ENST00000533131.5; ENST00000314915.6; ENST00000530861.5
External Link RMBase: m6A_site_135137
mod ID: M6ASITE004449 Click to Show/Hide the Full List
mod site chr11:27656075-27656076:- [2]
Sequence AAATCTTGTCCAGAGACAAGACTTCGGGAAGGTGTCTGGAC
Motif Score 3.319380952
Cell/Tissue List HeLa; A549; HepG2; H1B; H1A; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000439476.6; ENST00000530786.5; ENST00000395980.6; ENST00000314915.6; ENST00000532997.5; ENST00000525950.5; ENST00000530861.5; ENST00000584049.5; ENST00000438929.5; ENST00000395983.7; ENST00000356660.9; ENST00000525528.1; ENST00000395986.6; ENST00000395978.7; ENST00000420794.2; ENST00000395981.7; ENST00000533246.5; ENST00000418212.5; ENST00000533131.5
External Link RMBase: m6A_site_135138
mod ID: M6ASITE004450 Click to Show/Hide the Full List
mod site chr11:27656080-27656081:- [2]
Sequence ATAGGAAATCTTGTCCAGAGACAAGACTTCGGGAAGGTGTC
Motif Score 2.897386905
Cell/Tissue List HeLa; A549; HepG2; H1B; H1A; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000438929.5; ENST00000314915.6; ENST00000395978.7; ENST00000530861.5; ENST00000533131.5; ENST00000439476.6; ENST00000525950.5; ENST00000584049.5; ENST00000395986.6; ENST00000356660.9; ENST00000395980.6; ENST00000420794.2; ENST00000418212.5; ENST00000525528.1; ENST00000533246.5; ENST00000395983.7; ENST00000530786.5; ENST00000532997.5; ENST00000395981.7
External Link RMBase: m6A_site_135139
mod ID: M6ASITE004452 Click to Show/Hide the Full List
mod site chr11:27656104-27656105:- [2]
Sequence CAGGCCGAATGATCAAGGGGACCCATAGGAAATCTTGTCCA
Motif Score 3.622404762
Cell/Tissue List HeLa; A549; HepG2; H1A; H1B; fibroblasts; H1299; HEK293A-TOA; iSLK; MSC; TIME; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000533131.5; ENST00000530861.5; ENST00000525950.5; ENST00000530786.5; ENST00000584049.5; ENST00000395980.6; ENST00000395983.7; ENST00000395981.7; ENST00000533246.5; ENST00000525528.1; ENST00000356660.9; ENST00000439476.6; ENST00000314915.6; ENST00000438929.5; ENST00000420794.2; ENST00000418212.5; ENST00000395986.6; ENST00000532997.5; ENST00000395978.7
External Link RMBase: m6A_site_135140
mod ID: M6ASITE004453 Click to Show/Hide the Full List
mod site chr11:27656127-27656128:- [2]
Sequence AACAGGAAAAGAAACCCCAAACTCAGGCCGAATGATCAAGG
Motif Score 2.627720238
Cell/Tissue List HeLa; A549; HepG2; H1A; H1B; fibroblasts; H1299; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395978.7; ENST00000530861.5; ENST00000418212.5; ENST00000532997.5; ENST00000530786.5; ENST00000420794.2; ENST00000525950.5; ENST00000439476.6; ENST00000533131.5; ENST00000395986.6; ENST00000533246.5; ENST00000314915.6; ENST00000395983.7; ENST00000395981.7; ENST00000525528.1; ENST00000438929.5; ENST00000395980.6; ENST00000356660.9; ENST00000584049.5
External Link RMBase: m6A_site_135141
mod ID: M6ASITE004454 Click to Show/Hide the Full List
mod site chr11:27656134-27656135:- [2]
Sequence AAAAGGGAACAGGAAAAGAAACCCCAAACTCAGGCCGAATG
Motif Score 2.185083333
Cell/Tissue List HeLa; A549; HepG2; H1A; H1B; fibroblasts; H1299; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395978.7; ENST00000530861.5; ENST00000395981.7; ENST00000533246.5; ENST00000584049.5; ENST00000314915.6; ENST00000395986.6; ENST00000395983.7; ENST00000420794.2; ENST00000525528.1; ENST00000418212.5; ENST00000438929.5; ENST00000530786.5; ENST00000533131.5; ENST00000439476.6; ENST00000395980.6; ENST00000532997.5; ENST00000356660.9; ENST00000525950.5
External Link RMBase: m6A_site_135142
mod ID: M6ASITE004455 Click to Show/Hide the Full List
mod site chr11:27656146-27656147:- [2]
Sequence TTTTGGTAAGGGAAAAGGGAACAGGAAAAGAAACCCCAAAC
Motif Score 2.951386905
Cell/Tissue List HeLa; A549; HepG2; H1A; H1B; fibroblasts; H1299; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000438929.5; ENST00000418212.5; ENST00000530861.5; ENST00000533246.5; ENST00000439476.6; ENST00000525950.5; ENST00000395980.6; ENST00000395981.7; ENST00000533131.5; ENST00000532997.5; ENST00000420794.2; ENST00000314915.6; ENST00000395983.7; ENST00000395978.7; ENST00000356660.9; ENST00000530786.5; ENST00000395986.6; ENST00000584049.5; ENST00000525528.1
External Link RMBase: m6A_site_135143
mod ID: M6ASITE004456 Click to Show/Hide the Full List
mod site chr11:27656168-27656169:- [2]
Sequence CCAGGGTTTATCTTTTGAGAACTTTTGGTAAGGGAAAAGGG
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; HepG2; H1A; H1B; fibroblasts; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000418212.5; ENST00000420794.2; ENST00000438929.5; ENST00000530786.5; ENST00000395980.6; ENST00000395986.6; ENST00000314915.6; ENST00000395981.7; ENST00000533131.5; ENST00000356660.9; ENST00000533246.5; ENST00000395978.7; ENST00000525950.5; ENST00000530861.5; ENST00000584049.5; ENST00000439476.6; ENST00000532997.5; ENST00000395983.7; ENST00000525528.1
External Link RMBase: m6A_site_135144
mod ID: M6ASITE004457 Click to Show/Hide the Full List
mod site chr11:27656189-27656190:- [2]
Sequence TTGAAACTAGACTTGAGGAAACCAGGGTTTATCTTTTGAGA
Motif Score 2.185083333
Cell/Tissue List HeLa; A549; HepG2; fibroblasts; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000532997.5; ENST00000395980.6; ENST00000314915.6; ENST00000420794.2; ENST00000530786.5; ENST00000356660.9; ENST00000395983.7; ENST00000584049.5; ENST00000438929.5; ENST00000533246.5; ENST00000525950.5; ENST00000533131.5; ENST00000418212.5; ENST00000525528.1; ENST00000439476.6; ENST00000530861.5; ENST00000395981.7; ENST00000395986.6; ENST00000395978.7
External Link RMBase: m6A_site_135145
mod ID: M6ASITE004458 Click to Show/Hide the Full List
mod site chr11:27656199-27656200:- [2]
Sequence ACTTATTGCTTTGAAACTAGACTTGAGGAAACCAGGGTTTA
Motif Score 3.319380952
Cell/Tissue List HeLa; A549; HepG2; fibroblasts; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000530861.5; ENST00000314915.6; ENST00000533246.5; ENST00000395981.7; ENST00000525528.1; ENST00000533131.5; ENST00000420794.2; ENST00000532997.5; ENST00000395980.6; ENST00000525950.5; ENST00000530786.5; ENST00000395983.7; ENST00000439476.6; ENST00000438929.5; ENST00000418212.5; ENST00000356660.9; ENST00000395978.7; ENST00000395986.6; ENST00000584049.5
External Link RMBase: m6A_site_135146
mod ID: M6ASITE004459 Click to Show/Hide the Full List
mod site chr11:27656204-27656205:- [2]
Sequence TGAACACTTATTGCTTTGAAACTAGACTTGAGGAAACCAGG
Motif Score 2.627720238
Cell/Tissue List HeLa; A549; HepG2; fibroblasts; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395986.6; ENST00000395980.6; ENST00000420794.2; ENST00000314915.6; ENST00000395983.7; ENST00000356660.9; ENST00000525950.5; ENST00000533246.5; ENST00000532997.5; ENST00000530861.5; ENST00000438929.5; ENST00000525528.1; ENST00000395978.7; ENST00000530786.5; ENST00000533131.5; ENST00000584049.5; ENST00000418212.5; ENST00000395981.7; ENST00000439476.6
External Link RMBase: m6A_site_135147
mod ID: M6ASITE004460 Click to Show/Hide the Full List
mod site chr11:27656221-27656222:- [2]
Sequence AGAAGATGTTTGCTACCTGAACACTTATTGCTTTGAAACTA
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; fibroblasts; A549; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000418212.5; ENST00000530861.5; ENST00000395986.6; ENST00000395983.7; ENST00000356660.9; ENST00000420794.2; ENST00000533131.5; ENST00000395981.7; ENST00000532997.5; ENST00000525528.1; ENST00000395980.6; ENST00000530786.5; ENST00000533246.5; ENST00000584049.5; ENST00000314915.6; ENST00000525950.5; ENST00000395978.7; ENST00000438929.5; ENST00000439476.6
External Link RMBase: m6A_site_135148
mod ID: M6ASITE004461 Click to Show/Hide the Full List
mod site chr11:27656367-27656368:- [2]
Sequence AAGAGGTTCTCGACTGGAGGACCACACTCAAGCCGACTTAT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395980.6; ENST00000532997.5; ENST00000420794.2; ENST00000395981.7; ENST00000395986.6; ENST00000530786.5; ENST00000584049.5; ENST00000395983.7; ENST00000439476.6; ENST00000418212.5; ENST00000314915.6; ENST00000533131.5; ENST00000533246.5; ENST00000356660.9; ENST00000525950.5; ENST00000525528.1; ENST00000438929.5; ENST00000530861.5; ENST00000395978.7
External Link RMBase: m6A_site_135149
mod ID: M6ASITE004463 Click to Show/Hide the Full List
mod site chr11:27656426-27656427:- [2]
Sequence ACATGTGTCAAGCTGCTTGGACCTCGTGCTTTAAGTGCCTA
Motif Score 3.622404762
Cell/Tissue List HeLa; A549; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395978.7; ENST00000532997.5; ENST00000525528.1; ENST00000395983.7; ENST00000530861.5; ENST00000439476.6; ENST00000438929.5; ENST00000395981.7; ENST00000418212.5; ENST00000533246.5; ENST00000533131.5; ENST00000525950.5; ENST00000356660.9; ENST00000530786.5; ENST00000395980.6; ENST00000314915.6; ENST00000584049.5; ENST00000420794.2; ENST00000395986.6
External Link RMBase: m6A_site_135150
mod ID: M6ASITE004464 Click to Show/Hide the Full List
mod site chr11:27656471-27656472:- [2]
Sequence AAAACGAAGGCCTCTGAAGGACCCTTCAGAGGTGGCTCTGG
Motif Score 3.622404762
Cell/Tissue List HeLa; A549; H1B; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000418212.5; ENST00000533246.5; ENST00000530786.5; ENST00000532997.5; ENST00000525528.1; ENST00000395978.7; ENST00000395986.6; ENST00000314915.6; ENST00000525950.5; ENST00000356660.9; ENST00000395983.7; ENST00000533131.5; ENST00000395980.6; ENST00000530861.5; ENST00000439476.6; ENST00000584049.5; ENST00000438929.5; ENST00000420794.2; ENST00000395981.7
External Link RMBase: m6A_site_135151
mod ID: M6ASITE004465 Click to Show/Hide the Full List
mod site chr11:27656498-27656499:- [2]
Sequence GGTGGGGCATGGTATTTGAGACATTCCAAAACGAAGGCCTC
Motif Score 2.897386905
Cell/Tissue List HeLa; A549; H1A; H1B; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530786.5; ENST00000438929.5; ENST00000418212.5; ENST00000395983.7; ENST00000314915.6; ENST00000532997.5; ENST00000356660.9; ENST00000533246.5; ENST00000439476.6; ENST00000525950.5; ENST00000530861.5; ENST00000533131.5; ENST00000395981.7; ENST00000525528.1; ENST00000420794.2; ENST00000395980.6; ENST00000584049.5; ENST00000395986.6; ENST00000395978.7
External Link RMBase: m6A_site_135152
mod ID: M6ASITE004466 Click to Show/Hide the Full List
mod site chr11:27656608-27656609:- [2]
Sequence TGCCAGTGACATGAGACTGAACAGCCAAATGGAGGCTATGT
Motif Score 2.951386905
Cell/Tissue List HeLa; A549; H1A; H1B; fibroblasts; HEK293A-TOA; iSLK; MSC; TIME; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000525528.1; ENST00000395980.6; ENST00000356660.9; ENST00000395983.7; ENST00000395981.7; ENST00000530786.5; ENST00000420794.2; ENST00000525950.5; ENST00000530861.5; ENST00000314915.6; ENST00000533246.5; ENST00000532997.5; ENST00000584049.5; ENST00000438929.5; ENST00000395986.6; ENST00000439476.6; ENST00000533131.5; ENST00000395978.7; ENST00000418212.5
External Link RMBase: m6A_site_135153
mod ID: M6ASITE004467 Click to Show/Hide the Full List
mod site chr11:27656613-27656614:- [2]
Sequence CACATTGCCAGTGACATGAGACTGAACAGCCAAATGGAGGC
Motif Score 3.319380952
Cell/Tissue List HeLa; A549; H1A; H1B; fibroblasts; HEK293A-TOA; iSLK; MSC; TIME; GSCs
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000439476.6; ENST00000584049.5; ENST00000395981.7; ENST00000532997.5; ENST00000438929.5; ENST00000530786.5; ENST00000418212.5; ENST00000395978.7; ENST00000356660.9; ENST00000395983.7; ENST00000530861.5; ENST00000525950.5; ENST00000420794.2; ENST00000395980.6; ENST00000314915.6; ENST00000533131.5; ENST00000395986.6; ENST00000533246.5; ENST00000525528.1
External Link RMBase: m6A_site_135154
mod ID: M6ASITE004468 Click to Show/Hide the Full List
mod site chr11:27656642-27656643:- [2]
Sequence CCAGAAACACCTAGATCAGAACAGGAATCCACATTGCCAGT
Motif Score 2.951386905
Cell/Tissue List HeLa; A549; hESC-HEK293T; H1A; fibroblasts; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000525528.1; ENST00000395980.6; ENST00000530861.5; ENST00000356660.9; ENST00000395981.7; ENST00000395983.7; ENST00000314915.6; ENST00000533246.5; ENST00000532997.5; ENST00000438929.5; ENST00000533131.5; ENST00000418212.5; ENST00000439476.6; ENST00000395978.7; ENST00000395986.6; ENST00000584049.5; ENST00000420794.2; ENST00000525950.5; ENST00000530786.5
External Link RMBase: m6A_site_135155
mod ID: M6ASITE004469 Click to Show/Hide the Full List
mod site chr11:27656656-27656657:- [2]
Sequence AGCCCTGTATCAACCCAGAAACACCTAGATCAGAACAGGAA
Motif Score 2.20572619
Cell/Tissue List HeLa; brain; A549; H1A; fibroblasts; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List ENST00000530861.5; ENST00000439476.6; ENST00000532997.5; ENST00000395983.7; ENST00000438929.5; ENST00000395986.6; ENST00000418212.5; ENST00000533131.5; ENST00000584049.5; ENST00000314915.6; ENST00000395978.7; ENST00000356660.9; ENST00000525950.5; ENST00000525528.1; ENST00000420794.2; ENST00000530786.5; ENST00000533246.5; ENST00000395980.6; ENST00000395981.7
External Link RMBase: m6A_site_135156
mod ID: M6ASITE004470 Click to Show/Hide the Full List
mod site chr11:27656718-27656719:- [2]
Sequence CATGGCTAAGCTTAAAAAAAACTCATGGTGAGGCTTAACAA
Motif Score 2.627720238
Cell/Tissue List HeLa; fibroblasts; A549; HEK293A-TOA; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000584049.5; ENST00000525528.1; ENST00000530861.5; ENST00000439476.6; ENST00000532997.5; ENST00000530786.5; ENST00000314915.6; ENST00000533246.5; ENST00000525950.5; ENST00000395983.7; ENST00000438929.5; ENST00000533131.5; ENST00000395986.6; ENST00000418212.5; ENST00000395981.7; ENST00000395978.7; ENST00000420794.2; ENST00000356660.9; ENST00000395980.6
External Link RMBase: m6A_site_135157
mod ID: M6ASITE004471 Click to Show/Hide the Full List
mod site chr11:27656752-27656753:- [2]
Sequence TTATTTTTTATGAGGAGTGAACATTTGGGTAAATCATGGCT
Motif Score 2.951386905
Cell/Tissue List HeLa; A549
Seq Type List m6A-seq
Transcript ID List ENST00000525950.5; ENST00000356660.9; ENST00000395986.6; ENST00000533131.5; ENST00000420794.2; ENST00000395983.7; ENST00000418212.5; ENST00000532997.5; ENST00000530786.5; ENST00000395978.7; ENST00000395981.7; ENST00000438929.5; ENST00000439476.6; ENST00000314915.6; ENST00000584049.5; ENST00000533246.5; ENST00000530861.5; ENST00000395980.6; ENST00000525528.1
External Link RMBase: m6A_site_135158
mod ID: M6ASITE004472 Click to Show/Hide the Full List
mod site chr11:27656800-27656801:- [2]
Sequence ATTTTTTTTTAGAACAGAAAACAACAAAAAATAACCCCAAA
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000530786.5; ENST00000525528.1; ENST00000395980.6; ENST00000533246.5; ENST00000584049.5; ENST00000439476.6; ENST00000533131.5; ENST00000356660.9; ENST00000438929.5; ENST00000525950.5; ENST00000395981.7; ENST00000420794.2; ENST00000395978.7; ENST00000418212.5; ENST00000314915.6; ENST00000532997.5; ENST00000395983.7; ENST00000395986.6; ENST00000530861.5
External Link RMBase: m6A_site_135159
mod ID: M6ASITE004474 Click to Show/Hide the Full List
mod site chr11:27656807-27656808:- [2]
Sequence AACAGTGATTTTTTTTTAGAACAGAAAACAACAAAAAATAA
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000395986.6; ENST00000395978.7; ENST00000532997.5; ENST00000530786.5; ENST00000530861.5; ENST00000584049.5; ENST00000438929.5; ENST00000356660.9; ENST00000525950.5; ENST00000439476.6; ENST00000314915.6; ENST00000418212.5; ENST00000533246.5; ENST00000420794.2; ENST00000525528.1; ENST00000395983.7; ENST00000395981.7; ENST00000395980.6; ENST00000533131.5
External Link RMBase: m6A_site_135160
mod ID: M6ASITE004475 Click to Show/Hide the Full List
mod site chr11:27656826-27656827:- [2]
Sequence CACTCGTATAAGCATGGAGAACAGTGATTTTTTTTTAGAAC
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000530786.5; ENST00000420794.2; ENST00000525950.5; ENST00000418212.5; ENST00000525528.1; ENST00000533246.5; ENST00000314915.6; ENST00000438929.5; ENST00000532997.5; ENST00000530861.5; ENST00000395980.6; ENST00000439476.6; ENST00000533131.5; ENST00000395981.7; ENST00000395983.7; ENST00000356660.9; ENST00000395986.6; ENST00000395978.7; ENST00000584049.5
External Link RMBase: m6A_site_135161
mod ID: M6ASITE004476 Click to Show/Hide the Full List
mod site chr11:27657430-27657431:- [3]
Sequence CAACAAAAATTTGAACCAAAACATTCCGTTTACATTTTAGA
Motif Score 2.20572619
Cell/Tissue List A549
Seq Type List m6A-seq
Transcript ID List ENST00000395978.7; ENST00000420794.2; ENST00000530861.5; ENST00000533246.5; ENST00000525950.5; ENST00000395981.7; ENST00000439476.6; ENST00000395983.7; ENST00000438929.5; ENST00000314915.6; ENST00000395986.6; ENST00000356660.9; ENST00000530786.5; ENST00000533131.5; ENST00000584049.5; ENST00000418212.5; ENST00000395980.6; ENST00000532997.5; ENST00000525528.1
External Link RMBase: m6A_site_135162
mod ID: M6ASITE004477 Click to Show/Hide the Full List
mod site chr11:27657436-27657437:- [3]
Sequence CACACACAACAAAAATTTGAACCAAAACATTCCGTTTACAT
Motif Score 2.930744048
Cell/Tissue List A549
Seq Type List m6A-seq
Transcript ID List ENST00000395981.7; ENST00000438929.5; ENST00000395983.7; ENST00000395978.7; ENST00000530786.5; ENST00000395980.6; ENST00000356660.9; ENST00000533246.5; ENST00000532997.5; ENST00000584049.5; ENST00000418212.5; ENST00000530861.5; ENST00000439476.6; ENST00000395986.6; ENST00000525528.1; ENST00000533131.5; ENST00000314915.6; ENST00000420794.2; ENST00000525950.5
External Link RMBase: m6A_site_135163
mod ID: M6ASITE004478 Click to Show/Hide the Full List
mod site chr11:27657463-27657464:- [3]
Sequence TTTCAGAAAACAGAAAAAAAACACACACACACACAACAAAA
Motif Score 2.20572619
Cell/Tissue List A549
Seq Type List m6A-seq
Transcript ID List ENST00000530786.5; ENST00000420794.2; ENST00000418212.5; ENST00000438929.5; ENST00000395981.7; ENST00000395983.7; ENST00000439476.6; ENST00000395980.6; ENST00000395986.6; ENST00000533131.5; ENST00000395978.7; ENST00000356660.9; ENST00000525950.5; ENST00000314915.6; ENST00000532997.5; ENST00000530861.5; ENST00000584049.5; ENST00000525528.1; ENST00000533246.5
External Link RMBase: m6A_site_135164
mod ID: M6ASITE004479 Click to Show/Hide the Full List
mod site chr11:27657474-27657475:- [3]
Sequence AAACTGTCCTCTTTCAGAAAACAGAAAAAAAACACACACAC
Motif Score 2.20572619
Cell/Tissue List A549
Seq Type List m6A-seq
Transcript ID List ENST00000533246.5; ENST00000530861.5; ENST00000532997.5; ENST00000420794.2; ENST00000395980.6; ENST00000395978.7; ENST00000530786.5; ENST00000584049.5; ENST00000314915.6; ENST00000356660.9; ENST00000395983.7; ENST00000533131.5; ENST00000395981.7; ENST00000525528.1; ENST00000525950.5; ENST00000418212.5; ENST00000438929.5; ENST00000395986.6; ENST00000439476.6
External Link RMBase: m6A_site_135165
mod ID: M6ASITE004480 Click to Show/Hide the Full List
mod site chr11:27657492-27657493:- [3]
Sequence TAATTGTGAATTGATAATAAACTGTCCTCTTTCAGAAAACA
Motif Score 2.627720238
Cell/Tissue List A549
Seq Type List m6A-seq
Transcript ID List ENST00000438929.5; ENST00000314915.6; ENST00000533246.5; ENST00000395978.7; ENST00000420794.2; ENST00000532997.5; ENST00000530861.5; ENST00000395981.7; ENST00000525528.1; ENST00000439476.6; ENST00000395986.6; ENST00000530786.5; ENST00000533131.5; ENST00000584049.5; ENST00000356660.9; ENST00000395980.6; ENST00000395983.7; ENST00000525950.5; ENST00000418212.5
External Link RMBase: m6A_site_135166
mod ID: M6ASITE004481 Click to Show/Hide the Full List
mod site chr11:27657552-27657553:- [2]
Sequence GCCGTTGCCAAGAACTGAAAACATAAAAAGTTAAAAAAAAT
Motif Score 2.20572619
Cell/Tissue List HeLa; A549; Huh7; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000314915.6; ENST00000530861.5; ENST00000395978.7; ENST00000533246.5; ENST00000395983.7; ENST00000356660.9; ENST00000525950.5; ENST00000530786.5; ENST00000395986.6; ENST00000438929.5; ENST00000418212.5; ENST00000395981.7; ENST00000533131.5; ENST00000532997.5; ENST00000439476.6; ENST00000395980.6; ENST00000420794.2; ENST00000525528.1; ENST00000584049.5
External Link RMBase: m6A_site_135167
mod ID: M6ASITE004482 Click to Show/Hide the Full List
mod site chr11:27657559-27657560:- [2]
Sequence GTTTGTTGCCGTTGCCAAGAACTGAAAACATAAAAAGTTAA
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; Huh7; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000438929.5; ENST00000395983.7; ENST00000395986.6; ENST00000584049.5; ENST00000439476.6; ENST00000530786.5; ENST00000395978.7; ENST00000525950.5; ENST00000418212.5; ENST00000420794.2; ENST00000530861.5; ENST00000533131.5; ENST00000395980.6; ENST00000532997.5; ENST00000525528.1; ENST00000533246.5; ENST00000314915.6; ENST00000395981.7; ENST00000356660.9
External Link RMBase: m6A_site_135168
mod ID: M6ASITE004483 Click to Show/Hide the Full List
mod site chr11:27657635-27657636:- [2]
Sequence TGTCCATGACCAGAAGGGAAACAGTCATTTGCGCACAACTT
Motif Score 2.20572619
Cell/Tissue List HeLa; fibroblasts; A549; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000356660.9; ENST00000395983.7; ENST00000530786.5; ENST00000395978.7; ENST00000395980.6; ENST00000532997.5; ENST00000525950.5; ENST00000438929.5; ENST00000395981.7; ENST00000420794.2; ENST00000395986.6; ENST00000533246.5; ENST00000314915.6; ENST00000418212.5; ENST00000533131.5; ENST00000439476.6; ENST00000525528.1; ENST00000530861.5; ENST00000584049.5
External Link RMBase: m6A_site_135169
mod ID: M6ASITE004485 Click to Show/Hide the Full List
mod site chr11:27657658-27657659:- [2]
Sequence TTCTACAATCTATTTATTGGACATGTCCATGACCAGAAGGG
Motif Score 3.643047619
Cell/Tissue List HeLa; A549; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395980.6; ENST00000439476.6; ENST00000530786.5; ENST00000533246.5; ENST00000395983.7; ENST00000418212.5; ENST00000314915.6; ENST00000532997.5; ENST00000420794.2; ENST00000395981.7; ENST00000395986.6; ENST00000438929.5; ENST00000356660.9; ENST00000525950.5; ENST00000395978.7; ENST00000525528.1; ENST00000533131.5; ENST00000530861.5; ENST00000584049.5
External Link RMBase: m6A_site_135170
mod ID: M6ASITE004486 Click to Show/Hide the Full List
mod site chr11:27657714-27657715:- [2]
Sequence AGAAAAAAATAATTTTATGAACTGCATGTATAAATGAAGTT
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; fibroblasts; Huh7; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530786.5; ENST00000356660.9; ENST00000395983.7; ENST00000525528.1; ENST00000420794.2; ENST00000395981.7; ENST00000395978.7; ENST00000418212.5; ENST00000395980.6; ENST00000532997.5; ENST00000525950.5; ENST00000584049.5; ENST00000314915.6; ENST00000530861.5; ENST00000533131.5; ENST00000438929.5; ENST00000439476.6; ENST00000395986.6; ENST00000533246.5
External Link RMBase: m6A_site_135171
mod ID: M6ASITE004487 Click to Show/Hide the Full List
mod site chr11:27657785-27657786:- [2]
Sequence ATAGATTAGATTATATTGAGACAAAAATTATCTATTTGTAT
Motif Score 2.897386905
Cell/Tissue List HeLa; A549; HepG2; hESCs; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000525950.5; ENST00000530861.5; ENST00000533246.5; ENST00000530786.5; ENST00000395978.7; ENST00000395981.7; ENST00000420794.2; ENST00000314915.6; ENST00000438929.5; ENST00000395980.6; ENST00000356660.9; ENST00000525528.1; ENST00000533131.5; ENST00000395986.6; ENST00000439476.6; ENST00000584049.5; ENST00000418212.5; ENST00000532997.5; ENST00000395983.7
External Link RMBase: m6A_site_135172
mod ID: M6ASITE004488 Click to Show/Hide the Full List
mod site chr11:27657863-27657864:- [2]
Sequence CTGGCGATTCATAAGGATAGACACTTCTTGTGTATGTACAT
Motif Score 2.897386905
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1B; H1A; hESCs; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395986.6; ENST00000418212.5; ENST00000525528.1; ENST00000533131.5; ENST00000314915.6; ENST00000533246.5; ENST00000420794.2; ENST00000525950.5; ENST00000395978.7; ENST00000395981.7; ENST00000584049.5; ENST00000395983.7; ENST00000439476.6; ENST00000530786.5; ENST00000395980.6; ENST00000438929.5; ENST00000356660.9; ENST00000530861.5; ENST00000532997.5
External Link RMBase: m6A_site_135173
mod ID: M6ASITE004489 Click to Show/Hide the Full List
mod site chr11:27657936-27657937:- [2]
Sequence ATTGGAACTCCCAGTGCCGAACTACCCAGTCGTACGTGCGG
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000533246.5; ENST00000439476.6; ENST00000418212.5; ENST00000533131.5; ENST00000395983.7; ENST00000584049.5; ENST00000530861.5; ENST00000395981.7; ENST00000420794.2; ENST00000438929.5; ENST00000525950.5; ENST00000525528.1; ENST00000395980.6; ENST00000314915.6; ENST00000395978.7; ENST00000356660.9; ENST00000532997.5; ENST00000395986.6; ENST00000530786.5
External Link RMBase: m6A_site_135174
mod ID: M6ASITE004490 Click to Show/Hide the Full List
mod site chr11:27657950-27657951:- [2]
Sequence CATAGACAAAAGGCATTGGAACTCCCAGTGCCGAACTACCC
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000439476.6; ENST00000356660.9; ENST00000525528.1; ENST00000314915.6; ENST00000418212.5; ENST00000395981.7; ENST00000420794.2; ENST00000525950.5; ENST00000395986.6; ENST00000532997.5; ENST00000533131.5; ENST00000438929.5; ENST00000530861.5; ENST00000395983.7; ENST00000395980.6; ENST00000533246.5; ENST00000584049.5; ENST00000530786.5; ENST00000395978.7
External Link RMBase: m6A_site_135175
mod ID: M6ASITE004491 Click to Show/Hide the Full List
mod site chr11:27657965-27657966:- [2]
Sequence AGAAGGCTGCAGGGGCATAGACAAAAGGCATTGGAACTCCC
Motif Score 2.897386905
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395978.7; ENST00000314915.6; ENST00000420794.2; ENST00000438929.5; ENST00000418212.5; ENST00000532997.5; ENST00000530861.5; ENST00000525528.1; ENST00000395981.7; ENST00000356660.9; ENST00000395986.6; ENST00000530786.5; ENST00000584049.5; ENST00000525950.5; ENST00000533246.5; ENST00000439476.6; ENST00000395980.6; ENST00000395983.7; ENST00000533131.5
External Link RMBase: m6A_site_135176
mod ID: M6ASITE004492 Click to Show/Hide the Full List
mod site chr11:27658014-27658015:- [2]
Sequence TGAAGCAATACTTCTACGAGACCAAGTGCAATCCCATGGGT
Motif Score 2.876744048
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530786.5; ENST00000584049.5; ENST00000395978.7; ENST00000530861.5; ENST00000418212.5; ENST00000532997.5; ENST00000395981.7; ENST00000533246.5; ENST00000420794.2; ENST00000525950.5; ENST00000438929.5; ENST00000314915.6; ENST00000395986.6; ENST00000439476.6; ENST00000395983.7; ENST00000395980.6; ENST00000533131.5; ENST00000356660.9; ENST00000525528.1
External Link RMBase: m6A_site_135177
mod ID: M6ASITE004493 Click to Show/Hide the Full List
mod site chr11:27658091-27658092:- [2]
Sequence AGACAAAAAGACTGCAGTGGACATGTCGGGCGGGACGGTCA
Motif Score 3.643047619
Cell/Tissue List HeLa; A549; hESC-HEK293T; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000356660.9; ENST00000530861.5; ENST00000533131.5; ENST00000439476.6; ENST00000395980.6; ENST00000418212.5; ENST00000530786.5; ENST00000533246.5; ENST00000395978.7; ENST00000438929.5; ENST00000395986.6; ENST00000525950.5; ENST00000525528.1; ENST00000395981.7; ENST00000395983.7; ENST00000420794.2; ENST00000314915.6; ENST00000584049.5; ENST00000532997.5
External Link RMBase: m6A_site_135178
mod ID: M6ASITE004494 Click to Show/Hide the Full List
mod site chr11:27658101-27658102:- [2]
Sequence TAACGGCGGCAGACAAAAAGACTGCAGTGGACATGTCGGGC
Motif Score 3.319380952
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000439476.6; ENST00000395978.7; ENST00000533246.5; ENST00000533131.5; ENST00000438929.5; ENST00000530786.5; ENST00000395986.6; ENST00000532997.5; ENST00000525950.5; ENST00000584049.5; ENST00000395981.7; ENST00000418212.5; ENST00000420794.2; ENST00000525528.1; ENST00000356660.9; ENST00000395980.6; ENST00000395983.7; ENST00000314915.6; ENST00000530861.5
External Link RMBase: m6A_site_135179
mod ID: M6ASITE004496 Click to Show/Hide the Full List
mod site chr11:27658109-27658110:- [2]
Sequence TGAGTGGGTAACGGCGGCAGACAAAAAGACTGCAGTGGACA
Motif Score 2.897386905
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000439476.6; ENST00000533246.5; ENST00000530786.5; ENST00000356660.9; ENST00000395986.6; ENST00000532997.5; ENST00000420794.2; ENST00000533131.5; ENST00000584049.5; ENST00000395978.7; ENST00000395980.6; ENST00000314915.6; ENST00000525950.5; ENST00000525528.1; ENST00000530861.5; ENST00000395983.7; ENST00000395981.7; ENST00000438929.5; ENST00000418212.5
External Link RMBase: m6A_site_135180
mod ID: M6ASITE004497 Click to Show/Hide the Full List
mod site chr11:27658139-27658140:- [4]
Sequence AGGGGAGCTGAGCGTGTGTGACAGTATTAGTGAGTGGGTAA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T; A549
Seq Type List MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000530861.5; ENST00000584049.5; ENST00000395983.7; ENST00000420794.2; ENST00000439476.6; ENST00000395981.7; ENST00000525950.5; ENST00000525528.1; ENST00000356660.9; ENST00000530786.5; ENST00000533246.5; ENST00000395986.6; ENST00000395978.7; ENST00000418212.5; ENST00000314915.6; ENST00000438929.5; ENST00000395980.6; ENST00000532997.5; ENST00000533131.5
External Link RMBase: m6A_site_135181
mod ID: M6ASITE004498 Click to Show/Hide the Full List
mod site chr11:27658202-27658203:- [2]
Sequence AAATTACCTAGATGCTGCAAACATGTCCATGAGGGTCCGGC
Motif Score 2.20572619
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000418212.5; ENST00000395986.6; ENST00000530861.5; ENST00000395980.6; ENST00000584049.5; ENST00000525528.1; ENST00000530786.5; ENST00000356660.9; ENST00000395981.7; ENST00000525950.5; ENST00000395983.7; ENST00000533131.5; ENST00000420794.2; ENST00000438929.5; ENST00000532997.5; ENST00000314915.6; ENST00000439476.6; ENST00000395978.7; ENST00000533246.5
External Link RMBase: m6A_site_135182
mod ID: M6ASITE004499 Click to Show/Hide the Full List
mod site chr11:27658301-27658302:- [2]
Sequence AGAAAACAATAAGGACGCAGACTTGTACACGTCCAGGGTGA
Motif Score 3.319380952
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530786.5; ENST00000314915.6; ENST00000533131.5; ENST00000438929.5; ENST00000525528.1; ENST00000533246.5; ENST00000532997.5; ENST00000395986.6; ENST00000525950.5; ENST00000395981.7; ENST00000584049.5; ENST00000418212.5; ENST00000356660.9; ENST00000439476.6; ENST00000395978.7; ENST00000395980.6; ENST00000420794.2; ENST00000530861.5; ENST00000395983.7
External Link RMBase: m6A_site_135184
mod ID: M6ASITE004500 Click to Show/Hide the Full List
mod site chr11:27658316-27658317:- [2]
Sequence AGTTCGGCCCAATGAAGAAAACAATAAGGACGCAGACTTGT
Motif Score 2.20572619
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000438929.5; ENST00000439476.6; ENST00000395981.7; ENST00000356660.9; ENST00000532997.5; ENST00000395980.6; ENST00000525528.1; ENST00000530861.5; ENST00000418212.5; ENST00000314915.6; ENST00000533246.5; ENST00000533131.5; ENST00000530786.5; ENST00000584049.5; ENST00000525950.5; ENST00000395978.7; ENST00000395983.7; ENST00000420794.2; ENST00000395986.6
External Link RMBase: m6A_site_135185
mod ID: M6ASITE004501 Click to Show/Hide the Full List
mod site chr11:27658343-27658344:- [2]
Sequence AGAAGAGCTGTTGGATGAGGACCAGAAAGTTCGGCCCAATG
Motif Score 3.622404762
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; Huh7; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000530861.5; ENST00000532997.5; ENST00000525950.5; ENST00000438929.5; ENST00000584049.5; ENST00000395986.6; ENST00000420794.2; ENST00000395978.7; ENST00000439476.6; ENST00000525528.1; ENST00000356660.9; ENST00000530786.5; ENST00000314915.6; ENST00000395980.6; ENST00000395983.7; ENST00000533131.5; ENST00000533246.5; ENST00000418212.5; ENST00000395981.7
External Link RMBase: m6A_site_135187
mod ID: M6ASITE004502 Click to Show/Hide the Full List
mod site chr11:27658372-27658373:- [2]
Sequence TCATTGGCTGACACTTTCGAACACGTGATAGAAGAGCTGTT
Motif Score 2.951386905
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; Huh7; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000533246.5; ENST00000395981.7; ENST00000530861.5; ENST00000584049.5; ENST00000525950.5; ENST00000439476.6; ENST00000395986.6; ENST00000532997.5; ENST00000533131.5; ENST00000395980.6; ENST00000418212.5; ENST00000525528.1; ENST00000395978.7; ENST00000356660.9; ENST00000395983.7; ENST00000420794.2; ENST00000314915.6; ENST00000438929.5; ENST00000530786.5
External Link RMBase: m6A_site_135188
mod ID: M6ASITE004503 Click to Show/Hide the Full List
mod site chr11:27658395-27658396:- [5]
Sequence AGGCAGGTTCAAGAGGCTTGACATCATTGGCTGACACTTTC
Motif Score 2.859755952
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000395980.6; ENST00000530786.5; ENST00000532997.5; ENST00000438929.5; ENST00000420794.2; ENST00000395983.7; ENST00000395978.7; ENST00000525950.5; ENST00000418212.5; ENST00000533131.5; ENST00000439476.6; ENST00000525528.1; ENST00000395981.7; ENST00000356660.9; ENST00000584049.5; ENST00000314915.6; ENST00000395986.6; ENST00000530861.5; ENST00000533246.5
External Link RMBase: m6A_site_135189
mod ID: M6ASITE004505 Click to Show/Hide the Full List
mod site chr11:27658440-27658441:- [2]
Sequence CAGGTGTGCGGACCCATGGGACTCTGGAGAGCGTGAATGGG
Motif Score 4.065041667
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; H1299; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000533246.5; ENST00000532997.5; ENST00000395980.6; ENST00000584049.5; ENST00000525950.5; ENST00000395981.7; ENST00000395978.7; ENST00000530861.5; ENST00000530786.5; ENST00000418212.5; ENST00000356660.9; ENST00000438929.5; ENST00000314915.6; ENST00000439476.6; ENST00000533131.5; ENST00000395986.6; ENST00000420794.2; ENST00000525528.1; ENST00000395983.7
External Link RMBase: m6A_site_135191
mod ID: M6ASITE004506 Click to Show/Hide the Full List
mod site chr11:27658449-27658450:- [2]
Sequence TGGCCTACCCAGGTGTGCGGACCCATGGGACTCTGGAGAGC
Motif Score 3.622404762
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; H1299; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000395986.6; ENST00000438929.5; ENST00000533131.5; ENST00000439476.6; ENST00000530861.5; ENST00000395980.6; ENST00000356660.9; ENST00000395983.7; ENST00000530786.5; ENST00000584049.5; ENST00000525528.1; ENST00000395978.7; ENST00000418212.5; ENST00000533246.5; ENST00000395981.7; ENST00000525950.5; ENST00000314915.6; ENST00000420794.2; ENST00000532997.5
External Link RMBase: m6A_site_135192
mod ID: M6ASITE004507 Click to Show/Hide the Full List
mod site chr11:27658480-27658481:- [2]
Sequence AAAGAAGCAAACATCCGAGGACAAGGTGGCTTGGCCTACCC
Motif Score 3.643047619
Cell/Tissue List HeLa; A549; hESC-HEK293T; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; H1299; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000530786.5; ENST00000420794.2; ENST00000395980.6; ENST00000395978.7; ENST00000438929.5; ENST00000533246.5; ENST00000584049.5; ENST00000395981.7; ENST00000525528.1; ENST00000314915.6; ENST00000395983.7; ENST00000418212.5; ENST00000356660.9; ENST00000395986.6; ENST00000439476.6; ENST00000525950.5; ENST00000532997.5; ENST00000533131.5; ENST00000530861.5
External Link RMBase: m6A_site_135193
mod ID: M6ASITE004508 Click to Show/Hide the Full List
mod site chr11:27658490-27658491:- [2]
Sequence TGCCCCCATGAAAGAAGCAAACATCCGAGGACAAGGTGGCT
Motif Score 2.20572619
Cell/Tissue List HeLa; A549; HepG2; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; H1299; HEK293A-TOA; iSLK; MSC; TIME; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000584049.5; ENST00000439476.6; ENST00000395980.6; ENST00000395986.6; ENST00000525950.5; ENST00000525528.1; ENST00000395983.7; ENST00000533246.5; ENST00000356660.9; ENST00000532997.5; ENST00000533131.5; ENST00000420794.2; ENST00000530786.5; ENST00000438929.5; ENST00000395978.7; ENST00000314915.6; ENST00000418212.5; ENST00000395981.7; ENST00000530861.5
External Link RMBase: m6A_site_135194
mod ID: M6ASITE004509 Click to Show/Hide the Full List
mod site chr11:27658694-27658695:- [2]
Sequence TATCACCAAGACATAAAAAAACCTTGACCCTGCAGAATGGC
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000439476.6; ENST00000525950.5; ENST00000418212.5; ENST00000532997.5; ENST00000533131.5; ENST00000584049.5; ENST00000395983.7; ENST00000356660.9; ENST00000438929.5; ENST00000314915.6; ENST00000530861.5; ENST00000395980.6; ENST00000533246.5; ENST00000420794.2; ENST00000530786.5; ENST00000395986.6; ENST00000525528.1; ENST00000395978.7; ENST00000395981.7
External Link RMBase: m6A_site_135199
mod ID: M6ASITE004511 Click to Show/Hide the Full List
mod site chr11:27658704-27658705:- [2]
Sequence AGCTGGAGTTTATCACCAAGACATAAAAAAACCTTGACCCT
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000533131.5; ENST00000532997.5; ENST00000530786.5; ENST00000530861.5; ENST00000533246.5; ENST00000314915.6; ENST00000525528.1; ENST00000395980.6; ENST00000395978.7; ENST00000395986.6; ENST00000525950.5; ENST00000438929.5; ENST00000584049.5; ENST00000439476.6; ENST00000420794.2; ENST00000395981.7; ENST00000356660.9; ENST00000418212.5; ENST00000395983.7
External Link RMBase: m6A_site_135200
mod ID: M6ASITE004514 Click to Show/Hide the Full List
mod site chr11:27700170-27700171:- [2]
Sequence GACCCGTGAGGTTTGTGTGGACCCCGAGGTAGGCAAGCGCT
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000584049.5; ENST00000356660.9; ENST00000530861.5; ENST00000395978.7; ENST00000525950.5; ENST00000314915.6; ENST00000532997.5; ENST00000530663.1; ENST00000395981.7; ENST00000533246.5; ENST00000420794.2; ENST00000395983.7; ENST00000418212.5; ENST00000530786.5; ENST00000438929.5; ENST00000395980.6
External Link RMBase: m6A_site_135223
mod ID: M6ASITE004515 Click to Show/Hide the Full List
mod site chr11:27700189-27700190:- [2]
Sequence ATGTGACTCCGCCGCCGGGGACCCGTGAGGTTTGTGTGGAC
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000356660.9; ENST00000395978.7; ENST00000395981.7; ENST00000530663.1; ENST00000314915.6; ENST00000418212.5; ENST00000533246.5; ENST00000395983.7; ENST00000530861.5; ENST00000420794.2; ENST00000438929.5; ENST00000584049.5; ENST00000532997.5; ENST00000530786.5; ENST00000525950.5; ENST00000395980.6
External Link RMBase: m6A_site_135224
mod ID: M6ASITE004516 Click to Show/Hide the Full List
mod site chr11:27700215-27700216:- [2]
Sequence GCGCTGGAGCCAGAATCGGAACCACGATGTGACTCCGCCGC
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000530861.5; ENST00000438929.5; ENST00000530786.5; ENST00000533246.5; ENST00000530663.1; ENST00000532997.5; ENST00000525950.5; ENST00000395980.6; ENST00000314915.6; ENST00000584049.5; ENST00000395981.7; ENST00000395983.7; ENST00000395978.7; ENST00000418212.5; ENST00000420794.2; ENST00000356660.9
External Link RMBase: m6A_site_135225
mod ID: M6ASITE004517 Click to Show/Hide the Full List
mod site chr11:27700246-27700247:- [2]
Sequence GGAGCAGCACCGCGACGGGGACCGGGGCTGGGCGCTGGAGC
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000530861.5; ENST00000530663.1; ENST00000533246.5; ENST00000418212.5; ENST00000525950.5; ENST00000395978.7; ENST00000420794.2; ENST00000584049.5; ENST00000532997.5; ENST00000314915.6; ENST00000395980.6; ENST00000356660.9; ENST00000438929.5; ENST00000395981.7; ENST00000395983.7; ENST00000530786.5
External Link RMBase: m6A_site_135226
mod ID: M6ASITE004518 Click to Show/Hide the Full List
mod site chr11:27700294-27700295:- [2]
Sequence GCTCGGGGGGCTTTAATGAGACACCCACCGCTGCTGTGGGG
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000395980.6; ENST00000584049.5; ENST00000356660.9; ENST00000530861.5; ENST00000420794.2; ENST00000532997.5; ENST00000418212.5; ENST00000395983.7; ENST00000525950.5; ENST00000438929.5; ENST00000533246.5; ENST00000530663.1; ENST00000395981.7; ENST00000395978.7; ENST00000314915.6; ENST00000530786.5
External Link RMBase: m6A_site_135227
mod ID: M6ASITE004519 Click to Show/Hide the Full List
mod site chr11:27700350-27700351:- [2]
Sequence GCCTCGGGCTCCCGGGCCGGACAGAGGAGCCAGCCCGGTGC
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000532997.5; ENST00000356660.9; ENST00000584049.5; ENST00000530786.5; ENST00000314915.6; ENST00000420794.2; ENST00000395980.6; ENST00000395978.7; ENST00000530861.5; ENST00000525950.5; ENST00000418212.5; ENST00000438929.5; ENST00000533246.5; ENST00000530663.1; ENST00000395981.7; ENST00000395983.7
External Link RMBase: m6A_site_135228
mod ID: M6ASITE004520 Click to Show/Hide the Full List
mod site chr11:27701575-27701576:- [3]
Sequence GCTGCCGCTCCCCCCGGCGAACTAGCATGAAATCTCCCTGC
Motif Score 3.373380952
Cell/Tissue List A549; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000584049.5; ENST00000530663.1; ENST00000395980.6; ENST00000525950.5; ENST00000532997.5; ENST00000314915.6; ENST00000395978.7; ENST00000395981.7
External Link RMBase: m6A_site_135229