Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00114)

Target Name	APCDD1L divergent transcript (APCDD1L-DT)
Synonyms	APCDD1L-AS1; APCDD1L antisense RNA 1 (non-protein coding); APCDD1L antisense RNA 1; APCDD1L antisense RNA 1 (head to head) Click to Show/Hide
Gene Name	APCDD1L-DT
Family	Divergent transcripts
Gene ID	149773
HGNC ID	HGNC:27152
Ensembl Gene ID	ENSG00000231290
Chromosomal Location	20q13.32

RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00114)

APCDD1L divergent transcript (APCDD1L-DT)

Adenosine-to-Inosine editing (A-to-I)

In total 5 m6A sequence/site(s) in this target gene
mod ID: A2ISITE010787		Click to Show/Hide the Full List
mod site	chr20:58565870-58565871:+		[1]
Sequence	GTTTGATCATGTGAGTGGGCACTGGAAGGCACCATGCCCAG
Transcript ID List	ENST00000424205.1; ENST00000439558.5; ENST00000427140.5
External Link	RMBase: RNA-editing_site_88556
mod ID: A2ISITE010788		Click to Show/Hide the Full List
mod site	chr20:58575328-58575329:+		[1]
Sequence	AGGTGGTGGCGTGCGCCTATAGTCCCAGCTACTCAGGAGGC
Transcript ID List	rmsk_5164131; ENST00000427140.5
External Link	RMBase: RNA-editing_site_88557
mod ID: A2ISITE010789		Click to Show/Hide the Full List
mod site	chr20:58575342-58575343:+		[1]
Sequence	GCCTATAGTCCCAGCTACTCAGGAGGCTGGGGCAGGAGAAT
Transcript ID List	rmsk_5164131; ENST00000427140.5
External Link	RMBase: RNA-editing_site_88558
mod ID: A2ISITE010790		Click to Show/Hide the Full List
mod site	chr20:58581192-58581193:+		[1]
Sequence	CTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGT
Transcript ID List	ENST00000427140.5
External Link	RMBase: RNA-editing_site_88559
mod ID: A2ISITE010792		Click to Show/Hide the Full List
mod site	chr20:58605097-58605098:+		[1]
Sequence	TAAATGCAGGACACCCAGTTAAATTCTAATTGCAGGTAAAT
Transcript ID List	ENST00000427140.5
External Link	RMBase: RNA-editing_site_88560

2'-O-Methylation (2'-O-Me)

In total 1 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000263		Click to Show/Hide the Full List
mod site	chr20:58571695-58571696:+		[2]
Sequence	AGTGAAGAGAAGTACCAGGTGTCCTAAGAATGCTACAGCGG
Cell/Tissue List	HEK293
Seq Type List	RiboMeth-seq
Transcript ID List	ENST00000427140.5; ENST00000439558.5; ENST00000424205.1
External Link	RMBase: Nm_site_3545

N6-methyladenosine (m6A)

In total 53 m6A sequence/site(s) in this target gene
mod ID: M6ASITE053930		Click to Show/Hide the Full List
mod site	chr20:58515525-58515526:+		[3]
Sequence	AGGCAGCCGTGAGGCGGAGGACAGGCTGGGGGATCCCAAAG
Motif Score	3.643047619
Cell/Tissue List	HeLa; U2OS; fibroblasts; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000448374.5; ENST00000445984.5; ENST00000427140.5; ENST00000420279.5
External Link	RMBase: m6A_site_538404
mod ID: M6ASITE053931		Click to Show/Hide the Full List
mod site	chr20:58515578-58515579:+		[3]
Sequence	CCCCCAACCCAGGCACTGGGACTCTGGTGGCACCCTGGGTG
Motif Score	4.065041667
Cell/Tissue List	HeLa; U2OS; fibroblasts; MSC; TIME; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427794.1; ENST00000447767.1; ENST00000448374.5; ENST00000427140.5; ENST00000445984.5; ENST00000420279.5
External Link	RMBase: m6A_site_538405
mod ID: M6ASITE053932		Click to Show/Hide the Full List
mod site	chr20:58515643-58515644:+		[3]
Sequence	CACGAGCCTTGGAAAGGAGGACCGGGAGAGTTATGGCATTT
Motif Score	3.622404762
Cell/Tissue List	HeLa; A549; U2OS; fibroblasts; MSC; TIME; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427794.1; ENST00000447767.1; ENST00000420279.5; ENST00000448374.5; ENST00000427140.5; ENST00000445984.5
External Link	RMBase: m6A_site_538406
mod ID: M6ASITE053933		Click to Show/Hide the Full List
mod site	chr20:58519536-58519537:+		[4]
Sequence	CACCCTGTAGGAATTAGAAGACCATGTCCAGGAATTGAGCA
Motif Score	2.876744048
Cell/Tissue List	U2OS; MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000427794.1; ENST00000439558.5; ENST00000427140.5; ENST00000447767.1; ENST00000448374.5; ENST00000420279.5; ENST00000445984.5
External Link	RMBase: m6A_site_538407
mod ID: M6ASITE053934		Click to Show/Hide the Full List
mod site	chr20:58519591-58519592:+		[5]
Sequence	CAGTCTTCTGAGGCCCTGAAACCACATGGTGAGAAGTTGAA
Motif Score	2.185083333
Cell/Tissue List	TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000447767.1; ENST00000427140.5; ENST00000448374.5; ENST00000420279.5; ENST00000427794.1; ENST00000445984.5; ENST00000439558.5
External Link	RMBase: m6A_site_538408
mod ID: M6ASITE053935		Click to Show/Hide the Full List
mod site	chr20:58523840-58523841:+		[3]
Sequence	GGGTGGTAGTGAAGTTGCAAACTGCCCCTAAGAAAAAAGGT
Motif Score	2.627720238
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000439558.5; ENST00000448374.5; ENST00000447767.1; ENST00000424205.1; ENST00000427140.5; ENST00000420279.5
External Link	RMBase: m6A_site_538409
mod ID: M6ASITE053936		Click to Show/Hide the Full List
mod site	chr20:58523969-58523970:+		[3]
Sequence	TTGGATTTGATGGGGCTGAGACTTGCTTGTGCCTTTGTTGA
Motif Score	3.319380952
Cell/Tissue List	HeLa; U2OS; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000424205.1; ENST00000448374.5; ENST00000427140.5; ENST00000447767.1; ENST00000420279.5; ENST00000439558.5
External Link	RMBase: m6A_site_538410
mod ID: M6ASITE053937		Click to Show/Hide the Full List
mod site	chr20:58524011-58524012:+		[4]
Sequence	GGCAGGGCACTTTTATTGAAACTTGTTGAAAGGAGCTAGCT
Motif Score	2.627720238
Cell/Tissue List	U2OS; MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000424205.1; ENST00000439558.5; ENST00000447767.1; ENST00000420279.5; ENST00000427140.5; ENST00000448374.5
External Link	RMBase: m6A_site_538411
mod ID: M6ASITE053938		Click to Show/Hide the Full List
mod site	chr20:58524074-58524075:+		[4]
Sequence	ACACCACAGGGGGAAGCAGGACTTTGATTTAAGATACTCAC
Motif Score	4.065041667
Cell/Tissue List	U2OS; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000439558.5; ENST00000420279.5; ENST00000424205.1; ENST00000448374.5; ENST00000427140.5; ENST00000447767.1
External Link	RMBase: m6A_site_538412
mod ID: M6ASITE053939		Click to Show/Hide the Full List
mod site	chr20:58524218-58524219:+		[5]
Sequence	AAGCTCCAGGAAATTAAGAAACATGCCATTAGTTTTAGCAA
Motif Score	2.20572619
Cell/Tissue List	TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000448374.5; ENST00000447767.1; ENST00000420279.5; ENST00000424205.1; ENST00000427140.5; ENST00000439558.5
External Link	RMBase: m6A_site_538413
mod ID: M6ASITE053940		Click to Show/Hide the Full List
mod site	chr20:58524239-58524240:+		[4]
Sequence	CATGCCATTAGTTTTAGCAAACAATTTGAACAAAGTAAAAC
Motif Score	2.20572619
Cell/Tissue List	U2OS; MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000427140.5; ENST00000439558.5; ENST00000448374.5; ENST00000420279.5; ENST00000447767.1; ENST00000424205.1
External Link	RMBase: m6A_site_538414
mod ID: M6ASITE053941		Click to Show/Hide the Full List
mod site	chr20:58524248-58524249:+		[4]
Sequence	AGTTTTAGCAAACAATTTGAACAAAGTAAAACCAGATCTCC
Motif Score	2.951386905
Cell/Tissue List	U2OS; MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000427140.5; ENST00000424205.1; ENST00000448374.5; ENST00000420279.5; ENST00000447767.1; ENST00000439558.5
External Link	RMBase: m6A_site_538415
mod ID: M6ASITE053942		Click to Show/Hide the Full List
mod site	chr20:58524258-58524259:+		[5]
Sequence	AACAATTTGAACAAAGTAAAACCAGATCTCCCACCAAAGGC
Motif Score	2.185083333
Cell/Tissue List	MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000448374.5; ENST00000420279.5; ENST00000447767.1; ENST00000427140.5; ENST00000424205.1; ENST00000439558.5
External Link	RMBase: m6A_site_538416
mod ID: M6ASITE053943		Click to Show/Hide the Full List
mod site	chr20:58524284-58524285:+		[4]
Sequence	TCTCCCACCAAAGGCCGAGGACCATGAGGGGTCTGAGTGCC
Motif Score	3.622404762
Cell/Tissue List	U2OS; MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000448374.5; ENST00000420279.5; ENST00000427140.5; ENST00000447767.1; ENST00000439558.5; ENST00000424205.1
External Link	RMBase: m6A_site_538417
mod ID: M6ASITE053944		Click to Show/Hide the Full List
mod site	chr20:58524322-58524323:+		[4]
Sequence	GCCCCTGGCCCTGTTTGTGGACTCTGCGGGTCGTGGAGGAG
Motif Score	4.065041667
Cell/Tissue List	U2OS; fibroblasts; MSC; TIME
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000427140.5; ENST00000448374.5; ENST00000439558.5; ENST00000447767.1; ENST00000420279.5; ENST00000424205.1
External Link	RMBase: m6A_site_538418
mod ID: M6ASITE053945		Click to Show/Hide the Full List
mod site	chr20:58524466-58524467:+		[4]
Sequence	CCTGGTGGCACCAAAGGTGAACAGAAAGCATTTTTGGGGCG
Motif Score	2.951386905
Cell/Tissue List	U2OS; MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000427140.5; ENST00000448374.5; ENST00000424205.1; ENST00000420279.5; ENST00000439558.5; ENST00000447767.1
External Link	RMBase: m6A_site_538419
mod ID: M6ASITE053946		Click to Show/Hide the Full List
mod site	chr20:58524498-58524499:+		[4]
Sequence	TTTGGGGCGCCATGGCCCAGACCTCAGCCTGAACGTTGTGG
Motif Score	2.876744048
Cell/Tissue List	U2OS; MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000447767.1; ENST00000420279.5; ENST00000439558.5; ENST00000448374.5; ENST00000424205.1; ENST00000427140.5
External Link	RMBase: m6A_site_538420
mod ID: M6ASITE053947		Click to Show/Hide the Full List
mod site	chr20:58524552-58524553:+		[4]
Sequence	GTCTGCATGTGTTGGCGAGAACCAGTGGGCATCTCCTTGGA
Motif Score	2.930744048
Cell/Tissue List	U2OS; MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000424205.1; ENST00000447767.1; ENST00000420279.5; ENST00000448374.5; ENST00000439558.5; ENST00000427140.5
External Link	RMBase: m6A_site_538421
mod ID: M6ASITE053948		Click to Show/Hide the Full List
mod site	chr20:58524736-58524737:+		[5]
Sequence	AAAAGGGGCAGGGGACGGGAACAAAGAAACCAGTGCTGGTG
Motif Score	2.951386905
Cell/Tissue List	TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000420279.5; ENST00000427140.5; ENST00000439558.5; ENST00000447767.1; ENST00000424205.1
External Link	RMBase: m6A_site_538422
mod ID: M6ASITE053949		Click to Show/Hide the Full List
mod site	chr20:58524744-58524745:+		[5]
Sequence	CAGGGGACGGGAACAAAGAAACCAGTGCTGGTGATCCTGCC
Motif Score	2.185083333
Cell/Tissue List	TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000439558.5; ENST00000427140.5; ENST00000447767.1; ENST00000420279.5; ENST00000424205.1
External Link	RMBase: m6A_site_538423
mod ID: M6ASITE053950		Click to Show/Hide the Full List
mod site	chr20:58524792-58524793:+		[5]
Sequence	TAAGGTCTGCTTTAGTGTGGACATGGGACAGGGGCCAGCCC
Motif Score	3.643047619
Cell/Tissue List	TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000424205.1; ENST00000420279.5; ENST00000439558.5; ENST00000427140.5; ENST00000447767.1
External Link	RMBase: m6A_site_538424
mod ID: M6ASITE053951		Click to Show/Hide the Full List
mod site	chr20:58524799-58524800:+		[5]
Sequence	TGCTTTAGTGTGGACATGGGACAGGGGCCAGCCCCTGCTGC
Motif Score	3.643047619
Cell/Tissue List	TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000420279.5; ENST00000439558.5; ENST00000447767.1; ENST00000424205.1; ENST00000427140.5
External Link	RMBase: m6A_site_538425
mod ID: M6ASITE053952		Click to Show/Hide the Full List
mod site	chr20:58524831-58524832:+		[5]
Sequence	CCCTGCTGCTCCCTGGGGGAACACAGGTCCGTGGGGGTGGC
Motif Score	2.951386905
Cell/Tissue List	TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000424205.1; ENST00000427140.5; ENST00000439558.5; ENST00000420279.5; ENST00000447767.1
External Link	RMBase: m6A_site_538426
mod ID: M6ASITE053953		Click to Show/Hide the Full List
mod site	chr20:58524903-58524904:+		[4]
Sequence	ACATTTGTTGTACCACATGAACCAGTCTTGGACGGCTGTTC
Motif Score	2.930744048
Cell/Tissue List	U2OS; MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	rmsk_5164025; ENST00000439558.5; ENST00000427140.5; ENST00000420279.5; ENST00000424205.1; ENST00000447767.1
External Link	RMBase: m6A_site_538427
mod ID: M6ASITE053954		Click to Show/Hide the Full List
mod site	chr20:58524959-58524960:+		[3]
Sequence	ATGTGGGTAAAGCCCCCAAGACCAGAGCCTGGCACAGGGCC
Motif Score	2.876744048
Cell/Tissue List	HeLa; U2OS; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	rmsk_5164025; ENST00000427140.5; ENST00000447767.1; ENST00000420279.5; ENST00000424205.1; ENST00000439558.5
External Link	RMBase: m6A_site_538428
mod ID: M6ASITE053955		Click to Show/Hide the Full List
mod site	chr20:58525066-58525067:+		[3]
Sequence	CCAGGCTCCAGTGCTGCTGAACCACCATCCACCAGTATGAT
Motif Score	2.930744048
Cell/Tissue List	HeLa; U2OS; fibroblasts; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000447767.1; ENST00000439558.5; ENST00000427140.5; ENST00000420279.5; ENST00000424205.1
External Link	RMBase: m6A_site_538429
mod ID: M6ASITE053956		Click to Show/Hide the Full List
mod site	chr20:58525111-58525112:+		[3]
Sequence	GCAAGCCTCTCTCCACCTGGACCCAGATGATTCACCCGTTA
Motif Score	3.622404762
Cell/Tissue List	HeLa; U2OS; fibroblasts; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000447767.1; ENST00000427140.5; ENST00000439558.5; ENST00000420279.5; ENST00000424205.1
External Link	RMBase: m6A_site_538430
mod ID: M6ASITE053957		Click to Show/Hide the Full List
mod site	chr20:58525133-58525134:+		[3]
Sequence	CCAGATGATTCACCCGTTAAACATCCCAGGCACATTGAAGG
Motif Score	2.20572619
Cell/Tissue List	HeLa; U2OS; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000439558.5; ENST00000424205.1; ENST00000447767.1; ENST00000420279.5; ENST00000427140.5
External Link	RMBase: m6A_site_538431
mod ID: M6ASITE053958		Click to Show/Hide the Full List
mod site	chr20:58525161-58525162:+		[4]
Sequence	GGCACATTGAAGGGAGATGAACAGCGTCCAGCATGGTCCTC
Motif Score	2.951386905
Cell/Tissue List	U2OS; MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000427140.5; ENST00000447767.1; ENST00000420279.5; ENST00000424205.1; ENST00000439558.5
External Link	RMBase: m6A_site_538432
mod ID: M6ASITE053959		Click to Show/Hide the Full List
mod site	chr20:58525300-58525301:+		[6]
Sequence	ATACAGTCTTATTACAGAAAACTAGAAACCAGAAAAGCCCA
Motif Score	2.627720238
Cell/Tissue List	fibroblasts; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000420279.5; ENST00000447767.1; ENST00000424205.1; ENST00000427140.5; ENST00000439558.5
External Link	RMBase: m6A_site_538433
mod ID: M6ASITE053960		Click to Show/Hide the Full List
mod site	chr20:58525307-58525308:+		[6]
Sequence	CTTATTACAGAAAACTAGAAACCAGAAAAGCCCATCACACA
Motif Score	2.185083333
Cell/Tissue List	fibroblasts; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000424205.1; ENST00000439558.5; ENST00000427140.5; ENST00000447767.1; ENST00000420279.5
External Link	RMBase: m6A_site_538434
mod ID: M6ASITE053961		Click to Show/Hide the Full List
mod site	chr20:58525400-58525401:+		[3]
Sequence	GAAATGGGGTGAAGCTGTGGACTTTCTCTGGGTGCGATGAA
Motif Score	4.065041667
Cell/Tissue List	HeLa; fibroblasts; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000439558.5; ENST00000447767.1; ENST00000427140.5; ENST00000424205.1; ENST00000420279.5
External Link	RMBase: m6A_site_538435
mod ID: M6ASITE053962		Click to Show/Hide the Full List
mod site	chr20:58525500-58525501:+		[3]
Sequence	GCTGTACCAGGAGAGGAAGAACCTCTGAAGTGTTCTGGCTC
Motif Score	2.930744048
Cell/Tissue List	HeLa; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5; ENST00000420279.5; ENST00000447767.1; ENST00000439558.5; ENST00000424205.1
External Link	RMBase: m6A_site_538436
mod ID: M6ASITE053963		Click to Show/Hide the Full List
mod site	chr20:58525621-58525622:+		[3]
Sequence	GGGGGCAGTAAAATGTACAGACTCTGGGGAAGGAGACCAGG
Motif Score	3.319380952
Cell/Tissue List	HeLa; U2OS; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000424205.1; ENST00000420279.5; ENST00000447767.1; ENST00000439558.5; ENST00000427140.5
External Link	RMBase: m6A_site_538437
mod ID: M6ASITE053964		Click to Show/Hide the Full List
mod site	chr20:58525636-58525637:+		[3]
Sequence	TACAGACTCTGGGGAAGGAGACCAGGAAGGAGGCTGCAAAG
Motif Score	2.876744048
Cell/Tissue List	HeLa; U2OS; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000447767.1; ENST00000427140.5; ENST00000420279.5; ENST00000439558.5; ENST00000424205.1
External Link	RMBase: m6A_site_538438
mod ID: M6ASITE053965		Click to Show/Hide the Full List
mod site	chr20:58525708-58525709:+		[3]
Sequence	CTGGCAAAAAGCTGTTGGGGACCCAGCCAGGCTGCTTCCCT
Motif Score	3.622404762
Cell/Tissue List	HeLa; U2OS; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000420279.5; ENST00000439558.5; ENST00000424205.1; ENST00000447767.1; ENST00000427140.5
External Link	RMBase: m6A_site_538439
mod ID: M6ASITE053966		Click to Show/Hide the Full List
mod site	chr20:58525805-58525806:+		[5]
Sequence	GCTATGTAGATAAGCCACGAACTATCATTGAATCTTTTCTT
Motif Score	3.373380952
Cell/Tissue List	MSC; TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000424205.1; ENST00000439558.5; ENST00000447767.1; ENST00000427140.5; ENST00000420279.5
External Link	RMBase: m6A_site_538440
mod ID: M6ASITE053967		Click to Show/Hide the Full List
mod site	chr20:58573705-58573706:+		[3]
Sequence	ACTTCCGCTGTCTGCACAAAACTGGAGGGAGGCTGGGGGTG
Motif Score	2.627720238
Cell/Tissue List	HeLa; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5; ENST00000439558.5; ENST00000424205.1
External Link	RMBase: m6A_site_538441
mod ID: M6ASITE053968		Click to Show/Hide the Full List
mod site	chr20:58573754-58573755:+		[3]
Sequence	ATAAGTTTCCTCATCAGCAAACCGGAAAGAGAAAGACCGAC
Motif Score	2.185083333
Cell/Tissue List	HeLa; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5; ENST00000439558.5; ENST00000424205.1; rmsk_5164124
External Link	RMBase: m6A_site_538442
mod ID: M6ASITE053969		Click to Show/Hide the Full List
mod site	chr20:58573769-58573770:+		[3]
Sequence	AGCAAACCGGAAAGAGAAAGACCGACCTGGAGGCTGGTTAT
Motif Score	2.876744048
Cell/Tissue List	HeLa; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	rmsk_5164124; ENST00000427140.5; ENST00000439558.5; ENST00000424205.1
External Link	RMBase: m6A_site_538443
mod ID: M6ASITE053970		Click to Show/Hide the Full List
mod site	chr20:58573840-58573841:+		[5]
Sequence	TGTATAAAGCCCCAGCACAAACAGCAGTCGCCGCATGGGTC
Motif Score	2.20572619
Cell/Tissue List	TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000427140.5; ENST00000439558.5
External Link	RMBase: m6A_site_538444
mod ID: M6ASITE053971		Click to Show/Hide the Full List
mod site	chr20:58618799-58618800:+		[5]
Sequence	TGGAATGTATGAAAATGAAGACCGTTGCAGGAGGTCTTGAG
Motif Score	2.876744048
Cell/Tissue List	TIME
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538445
mod ID: M6ASITE053972		Click to Show/Hide the Full List
mod site	chr20:58618916-58618917:+		[3]
Sequence	CCCAGCTTGTCACAACATGGACTGTGTAACTGAGACGATTC
Motif Score	4.065041667
Cell/Tissue List	HeLa; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538446
mod ID: M6ASITE053973		Click to Show/Hide the Full List
mod site	chr20:58619008-58619009:+		[3]
Sequence	GCGCAATTTGCTCTCTATGGACTGTACCTGGGGTGCCTACC
Motif Score	4.065041667
Cell/Tissue List	HeLa; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538447
mod ID: M6ASITE053974		Click to Show/Hide the Full List
mod site	chr20:58619033-58619034:+		[3]
Sequence	ACCTGGGGTGCCTACCCTGGACTTCAGACAAGCTTCTTCAA
Motif Score	4.065041667
Cell/Tissue List	HeLa; TIME; MSC
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538448
mod ID: M6ASITE053975		Click to Show/Hide the Full List
mod site	chr20:58619040-58619041:+		[3]
Sequence	GTGCCTACCCTGGACTTCAGACAAGCTTCTTCAAGAGTAGC
Motif Score	2.897386905
Cell/Tissue List	HeLa; TIME; MSC
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538449
mod ID: M6ASITE053976		Click to Show/Hide the Full List
mod site	chr20:58619154-58619155:+		[3]
Sequence	AAGAGGCAGGGGCAGAAGGAACTGGGGCGGGAAGCCCTGAA
Motif Score	3.373380952
Cell/Tissue List	HeLa; TIME; MSC
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538450
mod ID: M6ASITE053977		Click to Show/Hide the Full List
mod site	chr20:58619192-58619193:+		[3]
Sequence	GAAGGGTGTCGAGTCCCAGGACAAGGGACTGGGGTGTGTCC
Motif Score	3.643047619
Cell/Tissue List	HeLa; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538451
mod ID: M6ASITE053978		Click to Show/Hide the Full List
mod site	chr20:58619199-58619200:+		[3]
Sequence	GTCGAGTCCCAGGACAAGGGACTGGGGTGTGTCCCAGCAGA
Motif Score	4.065041667
Cell/Tissue List	HeLa; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538452
mod ID: M6ASITE053979		Click to Show/Hide the Full List
mod site	chr20:58619219-58619220:+		[3]
Sequence	ACTGGGGTGTGTCCCAGCAGACCCCCAGGGAAGCAGCAGCT
Motif Score	2.876744048
Cell/Tissue List	HeLa; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538453
mod ID: M6ASITE053980		Click to Show/Hide the Full List
mod site	chr20:58619244-58619245:+		[3]
Sequence	CAGGGAAGCAGCAGCTTTGGACTCGCCTGACCCAACCCCTT
Motif Score	4.065041667
Cell/Tissue List	HeLa; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538454
mod ID: M6ASITE053981		Click to Show/Hide the Full List
mod site	chr20:58619273-58619274:+		[3]
Sequence	ACCCAACCCCTTGCTGCCAGACAGGCTTAAATTGCCCCAAC
Motif Score	2.897386905
Cell/Tissue List	HeLa; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538455
mod ID: M6ASITE053982		Click to Show/Hide the Full List
mod site	chr20:58619312-58619313:+		[3]
Sequence	ACTTTCCCCATGAAGCTCGGACAGGAGGACGGAGGAGCAAC
Motif Score	3.643047619
Cell/Tissue List	HeLa; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000427140.5
External Link	RMBase: m6A_site_538456

Ref 1	Accurate identification of A-to-I RNA editing in human by transcriptome sequencing. Genome Res. 2012 Jan;22(1):142-50. doi: 10.1101/gr.124107.111. Epub 2011 Sep 29.
Ref 2	High-throughput identification of C/D box snoRNA targets with CLIP and RiboMeth-seq. Nucleic Acids Res. 2017 Mar 17;45(5):2341-2353. doi: 10.1093/nar/gkw1321.
Ref 3	VIRMA mediates preferential m(6)A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Cell Discov. 2018 Feb 27;4:10. doi: 10.1038/s41421-018-0019-0. eCollection 2018.
Ref 4	RNA-methylation-dependent RNA processing controls the speed of the circadian clock. Cell. 2013 Nov 7;155(4):793-806. doi: 10.1016/j.cell.2013.10.026.
Ref 5	Viral and cellular N(6)-methyladenosine and N(6),2'-O-dimethyladenosine epitranscriptomes in the KSHV life cycle. Nat Microbiol. 2018 Jan;3(1):108-120. doi: 10.1038/s41564-017-0056-8. Epub 2017 Nov 6.
Ref 6	Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites. Cell Rep. 2014 Jul 10;8(1):284-96. doi: 10.1016/j.celrep.2014.05.048. Epub 2014 Jun 26.

Epigenetic Target Information

Cite M6AREG

Correspondence

Prof. Feng ZHU

Prof. Shuiping Liu

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